Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0018305

Physical Location & Seq

Genomic Coordinates Forward (+)

23581677 .. 23583019

Gene Structure 1343 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G63600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGGCAACAATGATCCAAAGTCTCTCTTCTCTCTTTTGCTTTCTTTCTCTTTTATCTCTTCTCTTCTCTACTAACCTAACCATATCCGAATCTGACCATATCCACATGAGCACCTTCTGCAACCAATTCTCCGACAACTTTACACAAACCAGCACATACGAGACAAACCGCGAAACCGTACTCTCCTCTCTCCGCCTCCGTTCCTCTCTCGGATCCTATTCCAATGCCACGGCGGGTATTAGCCCCGACACAGTCCGTGGCATGTTCCTCTGTAGAGGAGACATCTCAGAAACATCTTGTTCAGACTGTGTTCAAACCGCAACCCTAGAAATCTCAAGAAACTGCACTTACCAAAAAGAAGCTTTCATATTCTATGAAGAGTGTATGGTACGTTACTCGGATTCATCCTTTTTCTCCCTCGTAGACGAAAGACCTTACATCATTAGATACTCTTTGAGTTATGCTCCTAACTTGGATCGCTTCCCACAAACACTGTCCGATAAAATGGATGAGCTTATCATCAATGCGACTTCTTCCCCATCGCTATCATCAACACCGTATTTCGTGGAGGATCAAGAACGTGTGAAACAGTTCGAGGGTTCGTTTGATATAGATTCAATGGCTCAGTGTAGTCCTGATCTTGATCCAAGAAACTGCACAACGTGTTTGAAACTTGCGGTCCAAGAAATGTTGGAATGTTGCAACCAGTCTCGTTGGGCTCAGATCTTTACTCCTAAATGCCTCTTGAGGTACGAAGCTACCGCTTTGTCTTCACCGCCTCCACCATATCCATCACCTCCACCACCTTCTTCACCACTTTTTTCACCATTATTGCCGTCTCCCCCGCTTTTTAAGCGGCCGCAAACCGCGTCAGGGTTTAGCGGGTCATCTTCTATTAACGTTATAAAAGGAAACAAATCATTTGGGAGATTTTTTATTGCGGTCATGACAGCTTATGTGTCAATACTTCTGGGTGTAGGAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010275 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022607 GO:0031224 GO:0031225 GO:0031226 GO:0031976 GO:0031984 GO:0034357 GO:0034622 GO:0036211 GO:0042651 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Stress-antifung

Protein Analysis

328

Amino Acids

36.51

Weight (kDa)

4.99

Isoelectric Point (pI)

61.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	40 - 134	3.8e-23	Salt stress response/antifungal
Stress-antifung	PF01657	159 - 253	1.4e-09	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63550 AT1G63570 AT1G63570 AT1G63570 AT1G63580 AT1G63590 AT1G63600 AT5G41280 AT5G41290 AT5G41300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	905
AccI	GTMKAC	1 cut(s)	423
AccII	CGCG	2 cut(s)	171, 869
AclI	AACGTT	1 cut(s)	900
AclWI	GGATC	6 cut(s)	7, 207, 220, 483, 579, 638
AcoI	YGGCCR	1 cut(s)	857
AdeI	CACNNNGTG	1 cut(s)	663
AfaI	GTAC	3 cut(s)	180, 390, 752
AfiI	CCNNNNNNNGG	1 cut(s)	873
AflIII	ACRYGT	2 cut(s)	580, 662
AgsI	TTSAA	3 cut(s)	314, 618, 670
AluBI	AGCT	4 cut(s)	362, 514, 758, 953
AluI	AGCT	4 cut(s)	362, 514, 758, 953
Alw21I	GWGCWC	1 cut(s)	113
Alw26I	GTCTC	5 cut(s)	26, 155, 273, 714, 843
AlwI	GGATC	6 cut(s)	7, 207, 220, 483, 579, 638
AoxI	GGCC	1 cut(s)	857
Asp700I	GAANNNNTTC	1 cut(s)	590
AspS9I	GGNCC	1 cut(s)	679
AsuHPI	GGTGA	4 cut(s)	765, 786, 804, 816
AvaII	GGWCC	1 cut(s)	679
BamHI	GGATCC	1 cut(s)	212
BanII	GRGCYC	1 cut(s)	721
BbsI	GAAGAC	1 cut(s)	762
Bbv12I	GWGCWC	1 cut(s)	113
BccI	CCATC	2 cut(s)	547, 799
BceAI	ACGGC	2 cut(s)	246, 820
BcoDI	GTCTC	5 cut(s)	26, 155, 273, 714, 843
BfaI	CTAG	1 cut(s)	326
BfmI	CTRYAG	1 cut(s)	271
BglII	AGATCT	1 cut(s)	723
BisI	GCNGC	2 cut(s)	857, 860
BlsI	GCNGC	2 cut(s)	858, 861
Bme18I	GGWCC	1 cut(s)	679
BmgT120I	GGNCC	1 cut(s)	679
BmiI	GGNNCC	1 cut(s)	214
BpiI	GAAGAC	1 cut(s)	762
BplI	GAGNNNNNCTC	2 cut(s)	448, 480
BpuEI	CTTGAG	2 cut(s)	319, 766
BsaBI	GATNNNNATC	1 cut(s)	642
BsaJI	CCNNGG	2 cut(s)	228, 256
BsaXI	ACNNNNNCTCC	2 cut(s)	113, 143
Bsc4I	CCNNNNNNNGG	1 cut(s)	873
Bse1I	ACTGG	1 cut(s)	706
Bse8I	GATNNNNATC	1 cut(s)	642
BseDI	CCNNGG	2 cut(s)	228, 256
BseGI	GGATG	2 cut(s)	404, 514
BseJI	GATNNNNATC	1 cut(s)	642
BseLI	CCNNNNNNNGG	1 cut(s)	873
BseMII	CTCAG	3 cut(s)	300, 638, 734
BseNI	ACTGG	1 cut(s)	706
BseRI	GAGGAG	2 cut(s)	175, 291
BseX3I	CGGCCG	1 cut(s)	857
BsgI	GTGCAG	2 cut(s)	328, 640
Bsh1236I	CGCG	2 cut(s)	171, 869
Bsh1285I	CGRYCG	1 cut(s)	860
BshFI	GGCC	1 cut(s)	859
BsiEI	CGRYCG	1 cut(s)	860
BsiHKAI	GWGCWC	1 cut(s)	113
BslI	CCNNNNNNNGG	1 cut(s)	873
BsmAI	GTCTC	5 cut(s)	26, 155, 273, 714, 843
BsmBI	CGTCTC	1 cut(s)	843
BsnI	GGCC	1 cut(s)	859
Bsp1286I	GDGCHC	2 cut(s)	113, 721
Bsp143I	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
BspANI	GGCC	1 cut(s)	859
BspCNI	CTCAG	3 cut(s)	299, 637, 733
BspFNI	CGCG	2 cut(s)	171, 869
BspHI	TCATGA	1 cut(s)	945
BspLI	GGNNCC	1 cut(s)	214
BspPI	GGATC	6 cut(s)	7, 207, 220, 483, 579, 638
BsrI	ACTGG	1 cut(s)	706
BssECI	CCNNGG	2 cut(s)	228, 256
BssMI	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
Bst4CI	ACNGT	6 cut(s)	178, 253, 308, 495, 558, 591
Bst6I	CTCTTC	4 cut(s)	31, 63, 68, 372
BstAPI	GCANNNNNTGC	1 cut(s)	117
BstDEI	CTNAG	3 cut(s)	286, 624, 720
BstDSI	CCRYGG	2 cut(s)	228, 256
BstF5I	GGATG	2 cut(s)	404, 514
BstFNI	CGCG	2 cut(s)	171, 869
BstKTI	GATC	7 cut(s)	15, 215, 478, 574, 640, 646, 726
BstMAI	GTCTC	5 cut(s)	26, 155, 273, 714, 843
BstMBI	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
BstMCI	CGRYCG	1 cut(s)	860
BstMWI	GCNNNNNNNGC	2 cut(s)	117, 853
BstNSI	RCATGY	1 cut(s)	265
BstSFI	CTRYAG	1 cut(s)	271
BstUI	CGCG	2 cut(s)	171, 869
BstV2I	GAAGAC	1 cut(s)	762
BstX2I	RGATCY	2 cut(s)	212, 723
BstYI	RGATCY	2 cut(s)	212, 723
BstZI	CGGCCG	1 cut(s)	857
BsuRI	GGCC	1 cut(s)	859
BtgI	CCRYGG	2 cut(s)	228, 256
BtgZI	GCGATG	1 cut(s)	525
BtsCI	GGATG	2 cut(s)	404, 514
BtsIMutI	CAGTG	2 cut(s)	491, 632
CciI	TCATGA	1 cut(s)	945
CciNI	GCGGCCGC	1 cut(s)	857
Cfr13I	GGNCC	1 cut(s)	679
CseI	GACGC	1 cut(s)	858
Csp6I	GTAC	3 cut(s)	179, 389, 751
CviAII	CATG	3 cut(s)	106, 262, 946
CviJI	RGCY	8 cut(s)	243, 362, 514, 623, 719, 758, 859, 953
CviKI_1	RGCY	8 cut(s)	243, 362, 514, 623, 719, 758, 859, 953
CviQI	GTAC	3 cut(s)	179, 389, 751
DdeI	CTNAG	3 cut(s)	286, 624, 720
DpnI	GATC	7 cut(s)	14, 214, 477, 573, 639, 645, 725
DpnII	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
DraIII	CACNNNGTG	1 cut(s)	663
EaeI	YGGCCR	1 cut(s)	857
EagI	CGGCCG	1 cut(s)	857
Eam1104I	CTCTTC	4 cut(s)	31, 63, 68, 372
EarI	CTCTTC	4 cut(s)	31, 63, 68, 372
EciI	GGCGGA	1 cut(s)	182
EclXI	CGGCCG	1 cut(s)	857
Eco24I	GRGCYC	1 cut(s)	721
Eco47I	GGWCC	1 cut(s)	679
Eco52I	CGGCCG	1 cut(s)	857
EcoT38I	GRGCYC	1 cut(s)	721
Esp3I	CGTCTC	1 cut(s)	843
FaeI	CATG	3 cut(s)	109, 265, 949
FalI	AAGNNNNNCTT	2 cut(s)	10, 42
FatI	CATG	3 cut(s)	105, 261, 945
FauI	CCCGC	3 cut(s)	226, 852, 875
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	2 cut(s)	857, 860
FokI	GGATG	2 cut(s)	391, 521
FriOI	GRGCYC	1 cut(s)	721
Fsp4HI	GCNGC	2 cut(s)	857, 860
FspBI	CTAG	1 cut(s)	326
GluI	GCNGC	2 cut(s)	857, 860
HaeIII	GGCC	1 cut(s)	859
HgaI	GACGC	1 cut(s)	858
Hin1II	CATG	3 cut(s)	109, 265, 949
HindIII	AAGCTT	1 cut(s)	360
HinfI	GANTC	3 cut(s)	89, 401, 614
HphI	GGTGA	4 cut(s)	765, 786, 804, 816
Hpy166II	GTNNAC	1 cut(s)	424
Hpy188I	TCNGA	9 cut(s)	88, 94, 133, 212, 289, 304, 400, 499, 723
Hpy188III	TCNNGA	6 cut(s)	336, 575, 635, 641, 745, 946
Hpy8I	GTNNAC	1 cut(s)	424
HpyAV	CCTTC	2 cut(s)	124, 816
HpyCH4III	ACNGT	6 cut(s)	178, 253, 308, 495, 558, 591
HpyCH4IV	ACGT	4 cut(s)	391, 580, 662, 900
HpyCH4V	TGCA	4 cut(s)	120, 345, 657, 702
HpyF10VI	GCNNNNNNNGC	2 cut(s)	117, 853
HpyF3I	CTNAG	3 cut(s)	286, 624, 720
HpySE526I	ACGT	4 cut(s)	391, 580, 662, 900
Hsp92II	CATG	3 cut(s)	109, 265, 949
Kzo9I	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
LmnI	GCTCC	1 cut(s)	469
LpnPI	CCDG	5 cut(s)	163, 648, 719, 858, 956
MaeI	CTAG	1 cut(s)	326
MaeII	ACGT	4 cut(s)	391, 580, 662, 900
MaeIII	GTNAC	1 cut(s)	392
MalI	GATC	7 cut(s)	14, 214, 477, 573, 639, 645, 725
MboI	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
MboII	GAAGA	8 cut(s)	18, 50, 55, 389, 525, 762, 801, 882
MflI	RGATCY	2 cut(s)	212, 723
MhlI	GDGCHC	2 cut(s)	113, 721
MluCI	AATT	1 cut(s)	125
MmeI	TCCRAC	2 cut(s)	156, 672
MroXI	GAANNNNTTC	1 cut(s)	590
MseI	TTAA	2 cut(s)	852, 897
MvnI	CGCG	2 cut(s)	171, 869
MwoI	GCNNNNNNNGC	2 cut(s)	117, 853
NdeII	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
NlaIII	CATG	3 cut(s)	109, 265, 949
NlaIV	GGNNCC	1 cut(s)	214
NotI	GCGGCCGC	1 cut(s)	857
NspI	RCATGY	1 cut(s)	265
PagI	TCATGA	1 cut(s)	945
PdmI	GAANNNNTTC	1 cut(s)	590
PfeI	GAWTC	3 cut(s)	89, 401, 614
PflFI	GACNNNGTC	1 cut(s)	251
PkrI	GCNGC	2 cut(s)	858, 861
PsiI	TTATAA	1 cut(s)	905
Psp1406I	AACGTT	1 cut(s)	900
PspN4I	GGNNCC	1 cut(s)	214
PspPI	GGNCC	1 cut(s)	679
PsuI	RGATCY	2 cut(s)	212, 723
PsyI	GACNNNGTC	1 cut(s)	251
RsaI	GTAC	3 cut(s)	180, 390, 752
RsaNI	GTAC	3 cut(s)	179, 389, 751
SaqAI	TTAA	2 cut(s)	852, 897
SatI	GCNGC	2 cut(s)	857, 860
Sau3AI	GATC	7 cut(s)	12, 212, 475, 571, 637, 643, 723
Sau96I	GGNCC	1 cut(s)	679
SduI	GDGCHC	2 cut(s)	113, 721
SfcI	CTRYAG	1 cut(s)	271
SinI	GGWCC	1 cut(s)	679
SmlI	CTYRAG	2 cut(s)	334, 745
SmoI	CTYRAG	2 cut(s)	334, 745
Sse9I	AATT	1 cut(s)	125
SspMI	CTAG	1 cut(s)	326
TaaI	ACNGT	6 cut(s)	178, 253, 308, 495, 558, 591
TaiI	ACGT	4 cut(s)	394, 583, 665, 903
TaqI	TCGA	1 cut(s)	594
TasI	AATT	1 cut(s)	125
TauI	GCSGC	2 cut(s)	859, 862
TfiI	GAWTC	3 cut(s)	89, 401, 614
Tru1I	TTAA	2 cut(s)	852, 897
Tru9I	TTAA	2 cut(s)	852, 897
TscAI	CASTG	2 cut(s)	498, 632
TspDTI	ATGAA	3 cut(s)	355, 390, 393
TspGWI	ACGGA	2 cut(s)	188, 245
TspRI	CASTG	2 cut(s)	498, 632
Tth111I	GACNNNGTC	1 cut(s)	251
VpaK11BI	GGWCC	1 cut(s)	679
XceI	RCATGY	1 cut(s)	265
XmiI	GTMKAC	1 cut(s)	423
XmnI	GAANNNNTTC	1 cut(s)	590
XspI	CTAG	1 cut(s)	326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.