Holliday junction DNA helicase ruvB N-terminus
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64110 AT1G64110 AT1G64110 AT1G64110 AT1G64110 |
| fragaria_vesca | FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 |
| malus_domestica | MD06G1095300.v1.1 MD14G1115400.v1.1 |
| prunus_persica | Prupe.5G110200_v2.0.a1 |
| pyrus_communis | pycom06g09190 |
| rosa_chinensis | RchiOBHm_Chr7g0196151 |
| rosa_laevigata | RLG00000004060 |
| rosa_roxburghii | Rroxscaffold_3G00259730 |
| rosa_rugosa | Rorug07G0030900 Rorug07G0030900 Rorug07G0030900 |
| rosa_samantha | Rh7AG156900 Rh7BG158600 Rh7CG162400 Rh7DG157800 |
| rosa_wichuraiana | Rw7G013400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 975, 2312 |
| AarI | CACCTGC | 1 cut(s) | 2267 |
| AatII | GACGTC | 2 cut(s) | 399, 816 |
| Acc36I | ACCTGC | 1 cut(s) | 2267 |
| Acc65I | GGTACC | 1 cut(s) | 557 |
| AccB1I | GGYRCC | 1 cut(s) | 557 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1084 |
| AccBSI | CCGCTC | 2 cut(s) | 834, 2390 |
| AccII | CGCG | 1 cut(s) | 1041 |
| AccIII | TCCGGA | 1 cut(s) | 1465 |
| AciI | CCGC | 8 cut(s) | 87, 119, 832, 1305, 2190, 2366, 2378, 2390 |
| AclI | AACGTT | 1 cut(s) | 1740 |
| AclWI | GGATC | 5 cut(s) | 1048, 1214, 2045, 2240, 2446 |
| AcuI | CTGAAG | 3 cut(s) | 630, 1270, 1340 |
| AcyI | GRCGYC | 3 cut(s) | 21, 396, 813 |
| AfaI | GTAC | 3 cut(s) | 559, 1229, 1681 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 567, 1063, 1084, 1652, 1682 |
| AflII | CTTAAG | 1 cut(s) | 2171 |
| AgeI | ACCGGT | 1 cut(s) | 886 |
| AjnI | CCWGG | 1 cut(s) | 1954 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 703, 735 |
| Alw21I | GWGCWC | 2 cut(s) | 1561, 2186 |
| Alw26I | GTCTC | 8 cut(s) | 294, 781, 804, 998, 1189, 1286, 1373, 1640 |
| Alw44I | GTGCAC | 2 cut(s) | 1557, 2182 |
| AlwI | GGATC | 5 cut(s) | 1048, 1214, 2045, 2240, 2446 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 482 |
| Aor13HI | TCCGGA | 1 cut(s) | 1465 |
| AoxI | GGCC | 6 cut(s) | 81, 319, 768, 1613, 1991, 2201 |
| ApaLI | GTGCAC | 2 cut(s) | 1557, 2182 |
| ApeKI | GCWGC | 7 cut(s) | 236, 650, 653, 1030, 1410, 1979, 2192 |
| AsiGI | ACCGGT | 1 cut(s) | 886 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 257, 643, 738, 2076 |
| Asp718I | GGTACC | 1 cut(s) | 557 |
| AspLEI | GCGC | 2 cut(s) | 16, 700 |
| AspS9I | GGNCC | 5 cut(s) | 81, 320, 884, 889, 1670 |
| AsuC2I | CCSGG | 1 cut(s) | 1677 |
| AsuHPI | GGTGA | 6 cut(s) | 1258, 1390, 1818, 1970, 2218, 2291 |
| AsuII | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| AsuNHI | GCTAGC | 3 cut(s) | 296, 346, 1696 |
| AvaII | GGWCC | 3 cut(s) | 884, 889, 1670 |
| AxyI | CCTNAGG | 1 cut(s) | 996 |
| BaeGI | GKGCMC | 2 cut(s) | 1561, 2186 |
| BanI | GGYRCC | 1 cut(s) | 557 |
| BauI | CACGAG | 1 cut(s) | 216 |
| BbsI | GAAGAC | 2 cut(s) | 936, 1785 |
| Bbv12I | GWGCWC | 2 cut(s) | 1561, 2186 |
| BbvCI | CCTCAGC | 1 cut(s) | 2382 |
| BbvI | GCAGC | 7 cut(s) | 248, 662, 665, 1042, 1422, 1966, 2179 |
| BccI | CCATC | 4 cut(s) | 121, 530, 1139, 1931 |
| BceAI | ACGGC | 5 cut(s) | 53, 95, 132, 175, 448 |
| BciT130I | CCWGG | 1 cut(s) | 1956 |
| BciVI | GTATCC | 1 cut(s) | 2147 |
| BcnI | CCSGG | 1 cut(s) | 1677 |
| BcoDI | GTCTC | 8 cut(s) | 294, 781, 804, 998, 1189, 1286, 1373, 1640 |
| BfaI | CTAG | 9 cut(s) | 297, 347, 359, 392, 615, 1013, 1697, 1811, 2135 |
| BfmI | CTRYAG | 2 cut(s) | 1648, 2058 |
| BfoI | RGCGCY | 2 cut(s) | 17, 701 |
| BfrI | CTTAAG | 1 cut(s) | 2171 |
| BfuAI | ACCTGC | 1 cut(s) | 2267 |
| BfuI | GTATCC | 1 cut(s) | 2147 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 116, 1718 |
| BglII | AGATCT | 1 cut(s) | 467 |
| BisI | GCNGC | 9 cut(s) | 237, 651, 654, 1031, 1411, 1980, 2193, 2367, 2379 |
| BlsI | GCNGC | 9 cut(s) | 238, 652, 655, 1032, 1412, 1981, 2194, 2368, 2380 |
| Bme1390I | CCNGG | 2 cut(s) | 1677, 1956 |
| Bme18I | GGWCC | 3 cut(s) | 884, 889, 1670 |
| BmgT120I | GGNCC | 5 cut(s) | 81, 320, 884, 889, 1670 |
| BmiI | GGNNCC | 2 cut(s) | 559, 1076 |
| BmrFI | CCNGG | 2 cut(s) | 1677, 1956 |
| BmsI | GCATC | 3 cut(s) | 253, 364, 683 |
| BmtI | GCTAGC | 3 cut(s) | 300, 350, 1700 |
| BpiI | GAAGAC | 2 cut(s) | 936, 1785 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 294, 326, 941, 973 |
| BpmI | CTGGAG | 2 cut(s) | 276, 854 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2382 |
| Bpu14I | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| BpuEI | CTTGAG | 3 cut(s) | 398, 583, 921 |
| BpuMI | CCSGG | 1 cut(s) | 1677 |
| BsaHI | GRCGYC | 3 cut(s) | 21, 396, 813 |
| BsaI | GGTCTC | 1 cut(s) | 1640 |
| BsaJI | CCNNGG | 2 cut(s) | 780, 1347 |
| BsaWI | WCCGGW | 4 cut(s) | 886, 1465, 1477, 1507 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 18, 24, 48, 54 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 567, 1063, 1084, 1652, 1682 |
| Bse118I | RCCGGY | 4 cut(s) | 83, 886, 2053, 2203 |
| Bse1I | ACTGG | 1 cut(s) | 1248 |
| Bse21I | CCTNAGG | 1 cut(s) | 996 |
| Bse3DI | GCAATG | 2 cut(s) | 1707, 2145 |
| BseAI | TCCGGA | 1 cut(s) | 1465 |
| BseBI | CCWGG | 1 cut(s) | 1956 |
| BseDI | CCNNGG | 2 cut(s) | 780, 1347 |
| BseGI | GGATG | 5 cut(s) | 522, 1006, 1343, 1852, 1942 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 567, 1063, 1084, 1652, 1682 |
| BseMI | GCAATG | 2 cut(s) | 1707, 2145 |
| BseMII | CTCAG | 9 cut(s) | 217, 489, 545, 892, 987, 1076, 1215, 1434, 2373 |
| BseNI | ACTGG | 1 cut(s) | 1248 |
| BseRI | GAGGAG | 1 cut(s) | 580 |
| BseSI | GKGCMC | 2 cut(s) | 1561, 2186 |
| BseXI | GCAGC | 7 cut(s) | 248, 662, 665, 1042, 1422, 1966, 2179 |
| BseYI | CCCAGC | 1 cut(s) | 1519 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| Bsh1236I | CGCG | 1 cut(s) | 1041 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1309 |
| BshFI | GGCC | 6 cut(s) | 83, 321, 770, 1615, 1993, 2203 |
| BshNI | GGYRCC | 1 cut(s) | 557 |
| BshTI | ACCGGT | 1 cut(s) | 886 |
| BsiEI | CGRYCG | 1 cut(s) | 1309 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1561, 2186 |
| BslFI | GGGAC | 2 cut(s) | 1881, 2061 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 567, 1063, 1084, 1652, 1682 |
| BsmAI | GTCTC | 8 cut(s) | 294, 781, 804, 998, 1189, 1286, 1373, 1640 |
| BsmBI | CGTCTC | 1 cut(s) | 804 |
| BsmFI | GGGAC | 2 cut(s) | 1881, 2061 |
| BsnI | GGCC | 6 cut(s) | 83, 321, 770, 1615, 1993, 2203 |
| Bso31I | GGTCTC | 1 cut(s) | 1640 |
| Bsp119I | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1561, 2186 |
| Bsp13I | TCCGGA | 1 cut(s) | 1465 |
| BspACI | CCGC | 8 cut(s) | 87, 119, 832, 1305, 2190, 2366, 2378, 2390 |
| BspANI | GGCC | 6 cut(s) | 83, 321, 770, 1615, 1993, 2203 |
| BspCNI | CTCAG | 9 cut(s) | 216, 488, 544, 891, 988, 1075, 1216, 1435, 2374 |
| BspEI | TCCGGA | 1 cut(s) | 1465 |
| BspFNI | CGCG | 1 cut(s) | 1041 |
| BspLI | GGNNCC | 2 cut(s) | 559, 1076 |
| BspMAI | CTGCAG | 1 cut(s) | 1652 |
| BspMI | ACCTGC | 1 cut(s) | 2267 |
| BspOI | GCTAGC | 3 cut(s) | 300, 350, 1700 |
| BspPI | GGATC | 5 cut(s) | 1048, 1214, 2045, 2240, 2446 |
| BspT104I | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| BspT107I | GGYRCC | 1 cut(s) | 557 |
| BspTI | CTTAAG | 1 cut(s) | 2171 |
| BspTNI | GGTCTC | 1 cut(s) | 1640 |
| BsrBI | CCGCTC | 2 cut(s) | 834, 2390 |
| BsrDI | GCAATG | 2 cut(s) | 1707, 2145 |
| BsrFI | RCCGGY | 4 cut(s) | 83, 886, 2053, 2203 |
| BsrI | ACTGG | 1 cut(s) | 1248 |
| BssAI | RCCGGY | 4 cut(s) | 83, 886, 2053, 2203 |
| BssECI | CCNNGG | 2 cut(s) | 780, 1347 |
| BssNI | GRCGYC | 3 cut(s) | 21, 396, 813 |
| BssSI | CACGAG | 1 cut(s) | 216 |
| BssT1I | CCWWGG | 2 cut(s) | 780, 1347 |
| Bst2BI | CACGAG | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 1 cut(s) | 1956 |
| Bst4CI | ACNGT | 2 cut(s) | 507, 1405 |
| Bst6I | CTCTTC | 7 cut(s) | 534, 649, 1167, 1289, 1628, 1670, 2295 |
| BstACI | GRCGYC | 3 cut(s) | 21, 396, 813 |
| BstAFI | CTTAAG | 1 cut(s) | 2171 |
| BstBI | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| BstC8I | GCNNGC | 5 cut(s) | 85, 298, 348, 1303, 1698 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 565 |
| BstF5I | GGATG | 5 cut(s) | 522, 1006, 1343, 1852, 1942 |
| BstFNI | CGCG | 1 cut(s) | 1041 |
| BstH2I | RGCGCY | 2 cut(s) | 17, 701 |
| BstHHI | GCGC | 2 cut(s) | 16, 700 |
| BstMAI | GTCTC | 8 cut(s) | 294, 781, 804, 998, 1189, 1286, 1373, 1640 |
| BstMCI | CGRYCG | 1 cut(s) | 1309 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 116, 302, 432, 1302, 1718, 2263, 2375, 2387 |
| BstNI | CCWGG | 1 cut(s) | 1956 |
| BstSCI | CCNGG | 2 cut(s) | 1675, 1954 |
| BstSFI | CTRYAG | 2 cut(s) | 1648, 2058 |
| BstSLI | GKGCMC | 2 cut(s) | 1561, 2186 |
| BstUI | CGCG | 1 cut(s) | 1041 |
| BstV1I | GCAGC | 7 cut(s) | 248, 662, 665, 1042, 1422, 1966, 2179 |
| BstV2I | GAAGAC | 2 cut(s) | 936, 1785 |
| BstX2I | RGATCY | 2 cut(s) | 467, 1219 |
| BstYI | RGATCY | 2 cut(s) | 467, 1219 |
| Bsu36I | CCTNAGG | 1 cut(s) | 996 |
| BsuI | GTATCC | 1 cut(s) | 2147 |
| BsuRI | GGCC | 6 cut(s) | 83, 321, 770, 1615, 1993, 2203 |
| BtgZI | GCGATG | 1 cut(s) | 1131 |
| BtsCI | GGATG | 5 cut(s) | 522, 1006, 1343, 1852, 1942 |
| BtsI | GCAGTG | 3 cut(s) | 442, 583, 2417 |
| BtsIMutI | CAGTG | 5 cut(s) | 211, 442, 583, 886, 2417 |
| BveI | ACCTGC | 1 cut(s) | 2267 |
| Cac8I | GCNNGC | 5 cut(s) | 85, 298, 348, 1303, 1698 |
| CaiI | CAGNNNCTG | 1 cut(s) | 482 |
| CfoI | GCGC | 2 cut(s) | 16, 700 |
| Cfr10I | RCCGGY | 4 cut(s) | 83, 886, 2053, 2203 |
| Cfr13I | GGNCC | 5 cut(s) | 81, 320, 884, 889, 1670 |
| CseI | GACGC | 2 cut(s) | 10, 941 |
| CsiI | ACCWGGT | 1 cut(s) | 1954 |
| Csp6I | GTAC | 3 cut(s) | 558, 1228, 1680 |
| CspAI | ACCGGT | 1 cut(s) | 886 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 894, 929 |
| CviAII | CATG | 6 cut(s) | 1045, 1051, 1084, 1271, 1892, 2041 |
| CviQI | GTAC | 3 cut(s) | 558, 1228, 1680 |
| DraI | TTTAAA | 1 cut(s) | 2344 |
| Eam1104I | CTCTTC | 7 cut(s) | 534, 649, 1167, 1289, 1628, 1670, 2295 |
| EarI | CTCTTC | 7 cut(s) | 534, 649, 1167, 1289, 1628, 1670, 2295 |
| EciI | GGCGGA | 1 cut(s) | 134 |
| Eco130I | CCWWGG | 2 cut(s) | 780, 1347 |
| Eco31I | GGTCTC | 1 cut(s) | 1640 |
| Eco32I | GATATC | 2 cut(s) | 589, 1251 |
| Eco47I | GGWCC | 3 cut(s) | 884, 889, 1670 |
| Eco57I | CTGAAG | 3 cut(s) | 630, 1270, 1340 |
| Eco81I | CCTNAGG | 1 cut(s) | 996 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 565 |
| EcoRII | CCWGG | 1 cut(s) | 1954 |
| EcoRV | GATATC | 2 cut(s) | 589, 1251 |
| EcoT14I | CCWWGG | 2 cut(s) | 780, 1347 |
| ErhI | CCWWGG | 2 cut(s) | 780, 1347 |
| Esp3I | CGTCTC | 1 cut(s) | 804 |
| FaeI | CATG | 6 cut(s) | 1048, 1054, 1087, 1274, 1895, 2044 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 223, 255 |
| FaqI | GGGAC | 2 cut(s) | 1881, 2061 |
| FatI | CATG | 6 cut(s) | 1044, 1050, 1083, 1270, 1891, 2040 |
| FauI | CCCGC | 2 cut(s) | 80, 2383 |
| Fnu4HI | GCNGC | 9 cut(s) | 237, 651, 654, 1031, 1411, 1980, 2193, 2367, 2379 |
| FokI | GGATG | 5 cut(s) | 509, 1013, 1330, 1859, 1949 |
| Fsp4HI | GCNGC | 9 cut(s) | 237, 651, 654, 1031, 1411, 1980, 2193, 2367, 2379 |
| FspBI | CTAG | 9 cut(s) | 297, 347, 359, 392, 615, 1013, 1697, 1811, 2135 |
| GlaI | GCGC | 2 cut(s) | 15, 699 |
| GluI | GCNGC | 9 cut(s) | 237, 651, 654, 1031, 1411, 1980, 2193, 2367, 2379 |
| GsaI | CCCAGC | 1 cut(s) | 1523 |
| GsuI | CTGGAG | 2 cut(s) | 276, 854 |
| HaeII | RGCGCY | 2 cut(s) | 17, 701 |
| HaeIII | GGCC | 6 cut(s) | 83, 321, 770, 1615, 1993, 2203 |
| HgaI | GACGC | 2 cut(s) | 10, 941 |
| HhaI | GCGC | 2 cut(s) | 16, 700 |
| Hin1I | GRCGYC | 3 cut(s) | 21, 396, 813 |
| Hin1II | CATG | 6 cut(s) | 1048, 1054, 1087, 1274, 1895, 2044 |
| Hin6I | GCGC | 2 cut(s) | 14, 698 |
| HinP1I | GCGC | 2 cut(s) | 14, 698 |
| HincII | GTYRAC | 3 cut(s) | 157, 400, 1752 |
| HindII | GTYRAC | 3 cut(s) | 157, 400, 1752 |
| HindIII | AAGCTT | 3 cut(s) | 629, 737, 863 |
| HphI | GGTGA | 6 cut(s) | 1258, 1390, 1818, 1970, 2218, 2291 |
| Hpy188I | TCNGA | 9 cut(s) | 26, 74, 478, 534, 792, 1099, 1206, 1289, 2021 |
| Hpy99I | CGWCG | 5 cut(s) | 26, 74, 100, 639, 818 |
| HpyCH4III | ACNGT | 2 cut(s) | 507, 1405 |
| HpyCH4IV | ACGT | 5 cut(s) | 396, 813, 1536, 1740, 1963 |
| HpyCH4V | TGCA | 7 cut(s) | 236, 410, 674, 1475, 1559, 1650, 2184 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 116, 302, 432, 1302, 1718, 2263, 2375, 2387 |
| HpySE526I | ACGT | 5 cut(s) | 396, 813, 1536, 1740, 1963 |
| Hsp92I | GRCGYC | 3 cut(s) | 21, 396, 813 |
| Hsp92II | CATG | 6 cut(s) | 1048, 1054, 1087, 1274, 1895, 2044 |
| HspAI | GCGC | 2 cut(s) | 14, 698 |
| Kpn2I | TCCGGA | 1 cut(s) | 1465 |
| KpnI | GGTACC | 1 cut(s) | 561 |
| KroI | GCCGGC | 1 cut(s) | 83 |
| KroNI | GCCGGC | 1 cut(s) | 85 |
| LmnI | GCTCC | 3 cut(s) | 1468, 1724, 2387 |
| Lsp1109I | GCAGC | 7 cut(s) | 248, 662, 665, 1042, 1422, 1966, 2179 |
| LweI | GCATC | 3 cut(s) | 253, 364, 683 |
| MabI | ACCWGGT | 1 cut(s) | 1954 |
| MaeI | CTAG | 9 cut(s) | 297, 347, 359, 392, 615, 1013, 1697, 1811, 2135 |
| MaeII | ACGT | 5 cut(s) | 396, 813, 1536, 1740, 1963 |
| MaeIII | GTNAC | 7 cut(s) | 112, 381, 1396, 1450, 1537, 1578, 1824 |
| MbiI | CCGCTC | 2 cut(s) | 834, 2390 |
| MflI | RGATCY | 2 cut(s) | 467, 1219 |
| MhlI | GDGCHC | 2 cut(s) | 1561, 2186 |
| MluCI | AATT | 6 cut(s) | 174, 909, 942, 1162, 1530, 2420 |
| MlyI | GAGTC | 4 cut(s) | 551, 1000, 1586, 1936 |
| MmeI | TCCRAC | 5 cut(s) | 4, 10, 52, 1077, 1864 |
| MroI | TCCGGA | 1 cut(s) | 1465 |
| MroNI | GCCGGC | 1 cut(s) | 83 |
| MroXI | GAANNNNTTC | 4 cut(s) | 257, 643, 738, 2076 |
| MseI | TTAA | 5 cut(s) | 1157, 1533, 1943, 2172, 2343 |
| MslI | CAYNNNNRTG | 3 cut(s) | 261, 1049, 1935 |
| MspA1I | CMGCKG | 1 cut(s) | 2192 |
| MspCI | CTTAAG | 1 cut(s) | 2171 |
| MspR9I | CCNGG | 2 cut(s) | 1677, 1956 |
| MvaI | CCWGG | 1 cut(s) | 1956 |
| MvnI | CGCG | 1 cut(s) | 1041 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 116, 302, 432, 1302, 1718, 2263, 2375, 2387 |
| NaeI | GCCGGC | 1 cut(s) | 85 |
| NciI | CCSGG | 1 cut(s) | 1677 |
| NgoMIV | GCCGGC | 1 cut(s) | 83 |
| NheI | GCTAGC | 3 cut(s) | 296, 346, 1696 |
| NlaIII | CATG | 6 cut(s) | 1048, 1054, 1087, 1274, 1895, 2044 |
| NlaIV | GGNNCC | 2 cut(s) | 559, 1076 |
| NmeAIII | GCCGAG | 2 cut(s) | 326, 352 |
| NmuCI | GTSAC | 5 cut(s) | 112, 1396, 1537, 1578, 1824 |
| NspV | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| PaqCI | CACCTGC | 1 cut(s) | 2267 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2029 |
| PdiI | GCCGGC | 1 cut(s) | 85 |
| PdmI | GAANNNNTTC | 4 cut(s) | 257, 643, 738, 2076 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1084 |
| PinAI | ACCGGT | 1 cut(s) | 886 |
| PkrI | GCNGC | 9 cut(s) | 238, 652, 655, 1032, 1412, 1981, 2194, 2368, 2380 |
| PleI | GAGTC | 4 cut(s) | 550, 1000, 1585, 1935 |
| PpsI | GAGTC | 4 cut(s) | 550, 1000, 1585, 1935 |
| PsiI | TTATAA | 2 cut(s) | 975, 2312 |
| Psp1406I | AACGTT | 1 cut(s) | 1740 |
| Psp6I | CCWGG | 1 cut(s) | 1954 |
| PspFI | CCCAGC | 1 cut(s) | 1519 |
| PspGI | CCWGG | 1 cut(s) | 1954 |
| PspN4I | GGNNCC | 2 cut(s) | 559, 1076 |
| PspPI | GGNCC | 5 cut(s) | 81, 320, 884, 889, 1670 |
| PstI | CTGCAG | 1 cut(s) | 1652 |
| PstNI | CAGNNNCTG | 1 cut(s) | 482 |
| PsuI | RGATCY | 2 cut(s) | 467, 1219 |
| RsaI | GTAC | 3 cut(s) | 559, 1229, 1681 |
| RsaNI | GTAC | 3 cut(s) | 558, 1228, 1680 |
| RseI | CAYNNNNRTG | 3 cut(s) | 261, 1049, 1935 |
| SaqAI | TTAA | 5 cut(s) | 1157, 1533, 1943, 2172, 2343 |
| SatI | GCNGC | 9 cut(s) | 237, 651, 654, 1031, 1411, 1980, 2193, 2367, 2379 |
| Sau96I | GGNCC | 5 cut(s) | 81, 320, 884, 889, 1670 |
| SchI | GAGTC | 4 cut(s) | 551, 1000, 1586, 1936 |
| ScrFI | CCNGG | 2 cut(s) | 1677, 1956 |
| SduI | GDGCHC | 2 cut(s) | 1561, 2186 |
| SexAI | ACCWGGT | 1 cut(s) | 1954 |
| SfaNI | GCATC | 3 cut(s) | 253, 364, 683 |
| SfcI | CTRYAG | 2 cut(s) | 1648, 2058 |
| SfuI | TTCGAA | 3 cut(s) | 1763, 1817, 2028 |
| SinI | GGWCC | 3 cut(s) | 884, 889, 1670 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 261, 1049, 1935 |
| SmlI | CTYRAG | 4 cut(s) | 413, 562, 936, 2171 |
| SmoI | CTYRAG | 4 cut(s) | 413, 562, 936, 2171 |
| Sse9I | AATT | 6 cut(s) | 174, 909, 942, 1162, 1530, 2420 |
| SsiI | CCGC | 8 cut(s) | 87, 119, 832, 1305, 2190, 2366, 2378, 2390 |
| SspI | AATATT | 2 cut(s) | 661, 1839 |
| SspMI | CTAG | 9 cut(s) | 297, 347, 359, 392, 615, 1013, 1697, 1811, 2135 |
| StyD4I | CCNGG | 2 cut(s) | 1675, 1954 |
| StyI | CCWWGG | 2 cut(s) | 780, 1347 |
| TaaI | ACNGT | 2 cut(s) | 507, 1405 |
| TaiI | ACGT | 5 cut(s) | 399, 816, 1539, 1743, 1966 |
| TaqII | GACCGA | 1 cut(s) | 1658 |
| TasI | AATT | 6 cut(s) | 174, 909, 942, 1162, 1530, 2420 |
| TatI | WGTACW | 1 cut(s) | 1227 |
| TauI | GCSGC | 2 cut(s) | 2369, 2381 |
| Tru1I | TTAA | 5 cut(s) | 1157, 1533, 1943, 2172, 2343 |
| Tru9I | TTAA | 5 cut(s) | 1157, 1533, 1943, 2172, 2343 |
| TscAI | CASTG | 5 cut(s) | 211, 442, 583, 886, 2417 |
| TseFI | GTSAC | 5 cut(s) | 112, 1396, 1537, 1578, 1824 |
| TseI | GCWGC | 7 cut(s) | 236, 650, 653, 1030, 1410, 1979, 2192 |
| Tsp45I | GTSAC | 5 cut(s) | 112, 1396, 1537, 1578, 1824 |
| TspGWI | ACGGA | 5 cut(s) | 134, 1251, 1513, 1598, 2313 |
| TspRI | CASTG | 5 cut(s) | 211, 442, 583, 886, 2417 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1084 |
| Vha464I | CTTAAG | 1 cut(s) | 2171 |
| VneI | GTGCAC | 2 cut(s) | 1557, 2182 |
| VpaK11BI | GGWCC | 3 cut(s) | 884, 889, 1670 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 565 |
| XbaI | TCTAGA | 1 cut(s) | 391 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 878, 1840, 2359 |
| XmnI | GAANNNNTTC | 4 cut(s) | 257, 643, 738, 2076 |
| XspI | CTAG | 9 cut(s) | 297, 347, 359, 392, 615, 1013, 1697, 1811, 2135 |
| ZraI | GACGTC | 2 cut(s) | 397, 814 |