Holliday junction DNA helicase ruvB N-terminus
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64110 AT1G64110 AT1G64110 AT1G64110 AT1G64110 |
| fragaria_vesca | FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 |
| malus_domestica | MD06G1095300.v1.1 MD14G1115400.v1.1 |
| prunus_persica | Prupe.5G110200_v2.0.a1 |
| pyrus_communis | pycom06g09190 |
| rosa_chinensis | RchiOBHm_Chr7g0196151 |
| rosa_laevigata | RLG00000004060 |
| rosa_roxburghii | Rroxscaffold_3G00259730 |
| rosa_rugosa | Rorug07G0030900 Rorug07G0030900 Rorug07G0030900 |
| rosa_samantha | Rh7AG156900 Rh7BG158600 Rh7CG162400 Rh7DG157800 |
| rosa_wichuraiana | Rw7G013400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 941 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 457 |
| AccI | GTMKAC | 3 cut(s) | 1042, 1136, 1230 |
| AccII | CGCG | 2 cut(s) | 87, 1855 |
| AciI | CCGC | 3 cut(s) | 317, 1014, 1610 |
| AclWI | GGATC | 6 cut(s) | 265, 300, 587, 1794, 1807, 1858 |
| AcoI | YGGCCR | 1 cut(s) | 1586 |
| AcsI | RAATTY | 3 cut(s) | 67, 872, 1422 |
| AcuI | CTGAAG | 5 cut(s) | 9, 732, 756, 953, 1554 |
| AfaI | GTAC | 4 cut(s) | 134, 160, 465, 1570 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 135, 136, 457, 725, 1037, 1067, 1068, 1098, 1152 |
| AflII | CTTAAG | 1 cut(s) | 1556 |
| AgsI | TTSAA | 6 cut(s) | 247, 834, 1415, 1483, 1756, 1819 |
| AhlI | ACTAGT | 1 cut(s) | 161 |
| Alw21I | GWGCWC | 1 cut(s) | 59 |
| Alw26I | GTCTC | 3 cut(s) | 157, 788, 1213 |
| AlwI | GGATC | 6 cut(s) | 265, 300, 587, 1794, 1807, 1858 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 130, 537, 1682 |
| AoxI | GGCC | 4 cut(s) | 362, 1018, 1586, 1733 |
| ApoI | RAATTY | 3 cut(s) | 67, 872, 1422 |
| AseI | ATTAAT | 1 cut(s) | 1122 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 114, 381, 966 |
| AspLEI | GCGC | 3 cut(s) | 87, 89, 885 |
| AspS9I | GGNCC | 3 cut(s) | 363, 1055, 1734 |
| AsuC2I | CCSGG | 1 cut(s) | 1062 |
| AsuHPI | GGTGA | 2 cut(s) | 314, 1717 |
| AsuNHI | GCTAGC | 1 cut(s) | 1781 |
| AvaII | GGWCC | 1 cut(s) | 1055 |
| AxyI | CCTNAGG | 2 cut(s) | 720, 1730 |
| BamHI | GGATCC | 1 cut(s) | 1799 |
| BanI | GGYRCC | 1 cut(s) | 941 |
| BanII | GRGCYC | 1 cut(s) | 1329 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 31, 33, 63, 1859 |
| BbsI | GAAGAC | 3 cut(s) | 404, 1079, 1755 |
| Bbv12I | GWGCWC | 1 cut(s) | 59 |
| BccI | CCATC | 1 cut(s) | 1316 |
| BceAI | ACGGC | 1 cut(s) | 248 |
| BciVI | GTATCC | 1 cut(s) | 1138 |
| BcnI | CCSGG | 1 cut(s) | 1062 |
| BcoDI | GTCTC | 3 cut(s) | 157, 788, 1213 |
| BcuI | ACTAGT | 1 cut(s) | 161 |
| BfaI | CTAG | 5 cut(s) | 162, 207, 1098, 1505, 1782 |
| BfmI | CTRYAG | 3 cut(s) | 789, 804, 855 |
| BfrI | CTTAAG | 1 cut(s) | 1556 |
| BfuI | GTATCC | 1 cut(s) | 1138 |
| BmcAI | AGTACT | 2 cut(s) | 160, 465 |
| Bme1390I | CCNGG | 1 cut(s) | 1062 |
| Bme18I | GGWCC | 1 cut(s) | 1055 |
| BmgT120I | GGNCC | 3 cut(s) | 363, 1055, 1734 |
| BmiI | GGNNCC | 5 cut(s) | 262, 365, 943, 1057, 1801 |
| BmrFI | CCNGG | 1 cut(s) | 1062 |
| BmsI | GCATC | 1 cut(s) | 1645 |
| BmtI | GCTAGC | 1 cut(s) | 1785 |
| BpiI | GAAGAC | 3 cut(s) | 404, 1079, 1755 |
| BpmI | CTGGAG | 3 cut(s) | 279, 428, 1128 |
| BpuEI | CTTGAG | 2 cut(s) | 139, 1351 |
| BpuMI | CCSGG | 1 cut(s) | 1062 |
| BsaBI | GATNNNNATC | 1 cut(s) | 509 |
| BsaJI | CCNNGG | 4 cut(s) | 274, 643, 945, 1060 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 135, 136, 457, 725, 1037, 1067, 1068, 1098, 1152 |
| Bse1I | ACTGG | 4 cut(s) | 411, 675, 839, 1589 |
| Bse21I | CCTNAGG | 2 cut(s) | 720, 1730 |
| Bse3DI | GCAATG | 1 cut(s) | 1092 |
| Bse8I | GATNNNNATC | 1 cut(s) | 509 |
| BseDI | CCNNGG | 4 cut(s) | 274, 643, 945, 1060 |
| BseGI | GGATG | 2 cut(s) | 955, 1327 |
| BseJI | GATNNNNATC | 1 cut(s) | 509 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 135, 136, 457, 725, 1037, 1067, 1068, 1098, 1152 |
| BseMI | GCAATG | 1 cut(s) | 1092 |
| BseMII | CTCAG | 4 cut(s) | 310, 544, 1744, 1785 |
| BseNI | ACTGG | 4 cut(s) | 411, 675, 839, 1589 |
| BsePI | GCGCGC | 1 cut(s) | 85 |
| BseRI | GAGGAG | 1 cut(s) | 335 |
| BsgI | GTGCAG | 1 cut(s) | 1632 |
| Bsh1236I | CGCG | 2 cut(s) | 87, 1855 |
| BshFI | GGCC | 4 cut(s) | 364, 1020, 1588, 1735 |
| BshNI | GGYRCC | 1 cut(s) | 941 |
| BsiHKAI | GWGCWC | 1 cut(s) | 59 |
| BsiSI | CCGG | 1 cut(s) | 1062 |
| BslFI | GGGAC | 6 cut(s) | 112, 150, 200, 625, 1041, 1670 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 135, 136, 457, 725, 1037, 1067, 1068, 1098, 1152 |
| BsmAI | GTCTC | 3 cut(s) | 157, 788, 1213 |
| BsmBI | CGTCTC | 1 cut(s) | 157 |
| BsmFI | GGGAC | 6 cut(s) | 112, 150, 200, 625, 1041, 1670 |
| BsmI | GAATGC | 1 cut(s) | 19 |
| BsnI | GGCC | 4 cut(s) | 364, 1020, 1588, 1735 |
| Bsp1286I | GDGCHC | 2 cut(s) | 59, 1329 |
| Bsp1407I | TGTACA | 2 cut(s) | 132, 1568 |
| Bsp19I | CCATGG | 2 cut(s) | 643, 945 |
| Bsp68I | TCGCGA | 1 cut(s) | 1855 |
| BspACI | CCGC | 3 cut(s) | 317, 1014, 1610 |
| BspANI | GGCC | 4 cut(s) | 364, 1020, 1588, 1735 |
| BspCNI | CTCAG | 4 cut(s) | 309, 543, 1743, 1786 |
| BspFNI | CGCG | 2 cut(s) | 87, 1855 |
| BspLI | GGNNCC | 5 cut(s) | 262, 365, 943, 1057, 1801 |
| BspMAI | CTGCAG | 3 cut(s) | 793, 808, 859 |
| BspOI | GCTAGC | 1 cut(s) | 1785 |
| BspPI | GGATC | 6 cut(s) | 265, 300, 587, 1794, 1807, 1858 |
| BspT107I | GGYRCC | 1 cut(s) | 941 |
| BspTI | CTTAAG | 1 cut(s) | 1556 |
| BsrDI | GCAATG | 1 cut(s) | 1092 |
| BsrGI | TGTACA | 2 cut(s) | 132, 1568 |
| BsrI | ACTGG | 4 cut(s) | 411, 675, 839, 1589 |
| BssECI | CCNNGG | 4 cut(s) | 274, 643, 945, 1060 |
| BssHII | GCGCGC | 1 cut(s) | 85 |
| BssNAI | GTATAC | 1 cut(s) | 1043 |
| BssT1I | CCWWGG | 3 cut(s) | 274, 643, 945 |
| Bst1107I | GTATAC | 1 cut(s) | 1043 |
| Bst4CI | ACNGT | 2 cut(s) | 126, 1444 |
| Bst6I | CTCTTC | 1 cut(s) | 1634 |
| BstAFI | CTTAAG | 1 cut(s) | 1556 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1655 |
| BstAUI | TGTACA | 2 cut(s) | 132, 1568 |
| BstC8I | GCNNGC | 8 cut(s) | 87, 91, 1083, 1114, 1247, 1521, 1761, 1783 |
| BstDEI | CTNAG | 6 cut(s) | 182, 296, 530, 720, 1730, 1794 |
| BstDSI | CCRYGG | 2 cut(s) | 643, 945 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 723, 1035 |
| BstF5I | GGATG | 2 cut(s) | 955, 1327 |
| BstFNI | CGCG | 2 cut(s) | 87, 1855 |
| BstHHI | GCGC | 3 cut(s) | 87, 89, 885 |
| BstMAI | GTCTC | 3 cut(s) | 157, 788, 1213 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 93, 788, 809, 1103, 1255, 1655, 1787 |
| BstNSI | RCATGY | 1 cut(s) | 1249 |
| BstSCI | CCNGG | 1 cut(s) | 1060 |
| BstSFI | CTRYAG | 3 cut(s) | 789, 804, 855 |
| BstUI | CGCG | 2 cut(s) | 87, 1855 |
| BstV2I | GAAGAC | 3 cut(s) | 404, 1079, 1755 |
| BstX2I | RGATCY | 3 cut(s) | 292, 592, 1799 |
| BstYI | RGATCY | 3 cut(s) | 292, 592, 1799 |
| BstZ17I | GTATAC | 1 cut(s) | 1043 |
| Bsu36I | CCTNAGG | 2 cut(s) | 720, 1730 |
| BsuI | GTATCC | 1 cut(s) | 1138 |
| BsuRI | GGCC | 4 cut(s) | 364, 1020, 1588, 1735 |
| BtgI | CCRYGG | 2 cut(s) | 643, 945 |
| BtsCI | GGATG | 2 cut(s) | 955, 1327 |
| BtsI | GCAGTG | 2 cut(s) | 777, 1829 |
| BtsIMutI | CAGTG | 4 cut(s) | 304, 682, 777, 1829 |
| BtuMI | TCGCGA | 1 cut(s) | 1855 |
| Cac8I | GCNNGC | 8 cut(s) | 87, 91, 1083, 1114, 1247, 1521, 1761, 1783 |
| CaiI | CAGNNNCTG | 3 cut(s) | 130, 537, 1682 |
| CfoI | GCGC | 3 cut(s) | 87, 89, 885 |
| Cfr13I | GGNCC | 3 cut(s) | 363, 1055, 1734 |
| Csp6I | GTAC | 4 cut(s) | 133, 159, 464, 1569 |
| CviQI | GTAC | 4 cut(s) | 133, 159, 464, 1569 |
| DdeI | CTNAG | 6 cut(s) | 182, 296, 530, 720, 1730, 1794 |
| EaeI | YGGCCR | 1 cut(s) | 1586 |
| Eam1104I | CTCTTC | 1 cut(s) | 1634 |
| EarI | CTCTTC | 1 cut(s) | 1634 |
| EciI | GGCGGA | 2 cut(s) | 332, 1625 |
| Eco130I | CCWWGG | 3 cut(s) | 274, 643, 945 |
| Eco147I | AGGCCT | 1 cut(s) | 1020 |
| Eco24I | GRGCYC | 1 cut(s) | 1329 |
| Eco47I | GGWCC | 1 cut(s) | 1055 |
| Eco57I | CTGAAG | 5 cut(s) | 9, 732, 756, 953, 1554 |
| Eco81I | CCTNAGG | 2 cut(s) | 720, 1730 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 723, 1035 |
| EcoO109I | RGGNCCY | 2 cut(s) | 363, 1734 |
| EcoT14I | CCWWGG | 3 cut(s) | 274, 643, 945 |
| EcoT38I | GRGCYC | 1 cut(s) | 1329 |
| ErhI | CCWWGG | 3 cut(s) | 274, 643, 945 |
| Esp3I | CGTCTC | 1 cut(s) | 157 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 951, 983 |
| FaqI | GGGAC | 6 cut(s) | 112, 150, 200, 625, 1041, 1670 |
| FblI | GTMKAC | 3 cut(s) | 1042, 1136, 1230 |
| FokI | GGATG | 2 cut(s) | 962, 1334 |
| FriOI | GRGCYC | 1 cut(s) | 1329 |
| FspBI | CTAG | 5 cut(s) | 162, 207, 1098, 1505, 1782 |
| GlaI | GCGC | 3 cut(s) | 86, 88, 884 |
| GsuI | CTGGAG | 3 cut(s) | 279, 428, 1128 |
| HaeIII | GGCC | 4 cut(s) | 364, 1020, 1588, 1735 |
| HapII | CCGG | 1 cut(s) | 1062 |
| HhaI | GCGC | 3 cut(s) | 87, 89, 885 |
| Hin6I | GCGC | 3 cut(s) | 85, 87, 883 |
| HinP1I | GCGC | 3 cut(s) | 85, 87, 883 |
| HincII | GTYRAC | 1 cut(s) | 193 |
| HindII | GTYRAC | 1 cut(s) | 193 |
| HindIII | AAGCTT | 2 cut(s) | 113, 1114 |
| HinfI | GANTC | 9 cut(s) | 377, 400, 427, 962, 1312, 1350, 1672, 1719, 1768 |
| HpaII | CCGG | 1 cut(s) | 1062 |
| HphI | GGTGA | 2 cut(s) | 314, 1717 |
| Hpy166II | GTNNAC | 7 cut(s) | 193, 281, 1043, 1137, 1191, 1231, 1569 |
| Hpy188I | TCNGA | 3 cut(s) | 73, 1181, 1795 |
| Hpy8I | GTNNAC | 7 cut(s) | 193, 281, 1043, 1137, 1191, 1231, 1569 |
| HpyAV | CCTTC | 8 cut(s) | 392, 406, 700, 719, 977, 1483, 1529, 1838 |
| HpyCH4III | ACNGT | 2 cut(s) | 126, 1444 |
| HpyCH4IV | ACGT | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 9 cut(s) | 65, 540, 791, 806, 857, 1367, 1523, 1649, 1778 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 93, 788, 809, 1103, 1255, 1655, 1787 |
| HpyF3I | CTNAG | 6 cut(s) | 182, 296, 530, 720, 1730, 1794 |
| HpySE526I | ACGT | 1 cut(s) | 189 |
| HspAI | GCGC | 3 cut(s) | 85, 87, 883 |
| LmnI | GCTCC | 3 cut(s) | 260, 1109, 1516 |
| LweI | GCATC | 1 cut(s) | 1645 |
| MaeI | CTAG | 5 cut(s) | 162, 207, 1098, 1505, 1782 |
| MaeII | ACGT | 1 cut(s) | 189 |
| MaeIII | GTNAC | 4 cut(s) | 38, 302, 533, 922 |
| MfeI | CAATTG | 1 cut(s) | 522 |
| MflI | RGATCY | 3 cut(s) | 292, 592, 1799 |
| MhlI | GDGCHC | 2 cut(s) | 59, 1329 |
| MlyI | GAGTC | 2 cut(s) | 394, 1728 |
| MmeI | TCCRAC | 2 cut(s) | 1238, 1249 |
| MroXI | GAANNNNTTC | 3 cut(s) | 114, 381, 966 |
| MseI | TTAA | 6 cut(s) | 81, 650, 1122, 1557, 1601, 1739 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1320 |
| MspA1I | CMGCKG | 5 cut(s) | 96, 393, 803, 1014, 1577 |
| MspCI | CTTAAG | 1 cut(s) | 1556 |
| MspI | CCGG | 1 cut(s) | 1062 |
| MspR9I | CCNGG | 1 cut(s) | 1062 |
| MunI | CAATTG | 1 cut(s) | 522 |
| Mva1269I | GAATGC | 1 cut(s) | 19 |
| MvnI | CGCG | 2 cut(s) | 87, 1855 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 93, 788, 809, 1103, 1255, 1655, 1787 |
| NciI | CCSGG | 1 cut(s) | 1062 |
| NcoI | CCATGG | 2 cut(s) | 643, 945 |
| NheI | GCTAGC | 1 cut(s) | 1781 |
| NlaIV | GGNNCC | 5 cut(s) | 262, 365, 943, 1057, 1801 |
| NmuCI | GTSAC | 1 cut(s) | 302 |
| NruI | TCGCGA | 1 cut(s) | 1855 |
| NspI | RCATGY | 1 cut(s) | 1249 |
| PaeI | GCATGC | 1 cut(s) | 1249 |
| PauI | GCGCGC | 1 cut(s) | 85 |
| PceI | AGGCCT | 1 cut(s) | 1020 |
| PctI | GAATGC | 1 cut(s) | 19 |
| PdmI | GAANNNNTTC | 3 cut(s) | 114, 381, 966 |
| PfeI | GAWTC | 7 cut(s) | 377, 427, 962, 1312, 1350, 1672, 1768 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 457 |
| PleI | GAGTC | 2 cut(s) | 394, 1727 |
| PpsI | GAGTC | 2 cut(s) | 394, 1727 |
| PshBI | ATTAAT | 1 cut(s) | 1122 |
| PspN4I | GGNNCC | 5 cut(s) | 262, 365, 943, 1057, 1801 |
| PspPI | GGNCC | 3 cut(s) | 363, 1055, 1734 |
| PstI | CTGCAG | 3 cut(s) | 793, 808, 859 |
| PstNI | CAGNNNCTG | 3 cut(s) | 130, 537, 1682 |
| PsuI | RGATCY | 3 cut(s) | 292, 592, 1799 |
| PteI | GCGCGC | 1 cut(s) | 85 |
| PvuII | CAGCTG | 4 cut(s) | 96, 393, 803, 1577 |
| RruI | TCGCGA | 1 cut(s) | 1855 |
| RsaI | GTAC | 4 cut(s) | 134, 160, 465, 1570 |
| RsaNI | GTAC | 4 cut(s) | 133, 159, 464, 1569 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1320 |
| SaqAI | TTAA | 6 cut(s) | 81, 650, 1122, 1557, 1601, 1739 |
| Sau96I | GGNCC | 3 cut(s) | 363, 1055, 1734 |
| ScaI | AGTACT | 2 cut(s) | 160, 465 |
| SchI | GAGTC | 2 cut(s) | 394, 1728 |
| ScrFI | CCNGG | 1 cut(s) | 1062 |
| SduI | GDGCHC | 2 cut(s) | 59, 1329 |
| SfaNI | GCATC | 1 cut(s) | 1645 |
| SfcI | CTRYAG | 3 cut(s) | 789, 804, 855 |
| SinI | GGWCC | 1 cut(s) | 1055 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1320 |
| SmlI | CTYRAG | 3 cut(s) | 154, 1330, 1556 |
| SmoI | CTYRAG | 3 cut(s) | 154, 1330, 1556 |
| SpeI | ACTAGT | 1 cut(s) | 161 |
| SphI | GCATGC | 1 cut(s) | 1249 |
| SseBI | AGGCCT | 1 cut(s) | 1020 |
| SsiI | CCGC | 3 cut(s) | 317, 1014, 1610 |
| SspI | AATATT | 1 cut(s) | 34 |
| SspMI | CTAG | 5 cut(s) | 162, 207, 1098, 1505, 1782 |
| StuI | AGGCCT | 1 cut(s) | 1020 |
| StyD4I | CCNGG | 1 cut(s) | 1060 |
| StyI | CCWWGG | 3 cut(s) | 274, 643, 945 |
| TaaI | ACNGT | 2 cut(s) | 126, 1444 |
| TaiI | ACGT | 1 cut(s) | 192 |
| TaqI | TCGA | 4 cut(s) | 354, 503, 864, 1348 |
| TatI | WGTACW | 4 cut(s) | 132, 158, 463, 1568 |
| TfiI | GAWTC | 7 cut(s) | 377, 427, 962, 1312, 1350, 1672, 1768 |
| Tru1I | TTAA | 6 cut(s) | 81, 650, 1122, 1557, 1601, 1739 |
| Tru9I | TTAA | 6 cut(s) | 81, 650, 1122, 1557, 1601, 1739 |
| TscAI | CASTG | 4 cut(s) | 304, 682, 784, 1829 |
| TseFI | GTSAC | 1 cut(s) | 302 |
| Tsp45I | GTSAC | 1 cut(s) | 302 |
| TspGWI | ACGGA | 1 cut(s) | 1684 |
| TspRI | CASTG | 4 cut(s) | 304, 682, 784, 1829 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 457 |
| Vha464I | CTTAAG | 1 cut(s) | 1556 |
| VpaK11BI | GGWCC | 1 cut(s) | 1055 |
| VspI | ATTAAT | 1 cut(s) | 1122 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 723, 1035 |
| XapI | RAATTY | 3 cut(s) | 67, 872, 1422 |
| XbaI | TCTAGA | 1 cut(s) | 206 |
| XceI | RCATGY | 1 cut(s) | 1249 |
| XmiI | GTMKAC | 3 cut(s) | 1042, 1136, 1230 |
| XmnI | GAANNNNTTC | 3 cut(s) | 114, 381, 966 |
| XspI | CTAG | 5 cut(s) | 162, 207, 1098, 1505, 1782 |
| ZrmI | AGTACT | 2 cut(s) | 160, 465 |