Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0007626

Physical Location & Seq

Genomic Coordinates Forward (+)

12835952 .. 12840998

Gene Structure 5047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G013400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGGAGCAGAAAGGTATACTGCTTTCGGCGTTGGGTGTGGGGATGGGGGTCGGAGTCGGTCTTGGGCTGGCTTCGGGTCAGACGATGAGCAAATGGGCCGGAAACGAGGGCTTGTCTAACGGCATAACTCCAGACAGGGTGGAGCAGGAGATGCTACGACAGATCGTTGATGGCAGAGACAGTAAGGTCACCTTCGACCAATTCCCTTATTATCTCAATGAACAGACTCGAGTGTTGTTAACGAGTGCGGCCTATGTCCATCTGAAGAGGGCTGAGGTTTCTAAGCACACCCGGAATCTTTCTCCGGCGAGTCGGGCTATTTTGCTCTCGGGGCCTGCTGAACTCTACCAACAACTGCTTGCCAAGGCTTTAGCCCATTACTTCCAAGCCAAGTTGCTGCTCTTAGATGTAACAGATTTTTCATTAAAGATTCAGAGCAAATATGGTACTGGCAATAAAGCATCTGCTTTTAAAAGGTCCACTTCGGAGATGACACTAGATCGGCTCTCTGGTCTATTTGGATCATTTTCAATTTTTCCTCAAAAGGAGGAACCCAAAGGCACATTACGAAGGCAAAGCAGCGGTGTGGATTTAGGATCCAGGGGACTAGAAGGTTCTAAAAATGCTCCAAAGCTTCGTAGAAATGCTTCTGCTGCAGCTAATATCAGTAACCTTGCTTCTCAGGGAACTCCTTCAAATCCAGCTTCTCTTAAGCGCACAAGCAGCTGGTCTTTTGATGAAAGACTTTTCATACAGTCCCTGTACAAGGTCTTGGTTTATGTTTCAAAAACCACTCCCATTGTGCTGTATCTGAGGGACATCGACAACATCTTATCTAGATCTCAAAGGATATATAACTTGTTCCAGAAAATGTTGGATAAATTATCCGGAGCTGTGCTGATCCTTGGTTCCCGAATTGTGGATTTGGATAATGACTACAGAGACGTTGATGACAGGCTTACCGCACTTTTCCCTTACAACATCGAGATCAGACCTCCTGAAAATGAGTCACATCTTGTTAGCTGGAAGACTCAACTAGAGGAAGATATGAAGATGATTCAGGTTCAGGATAACAAAAACCACATTATGGAAGTCCTTTCAGCTAATGATCTCGACTGTGATGATCTAGGTTCAATTTGCATTGCCGACACAATGGATCTCAGTCACTATATAGAAGAGATTGTGGTATCAGCTGTTTCTTATCATTTAATGAATAACAGAGATCCTGAATATAGAAATGGAAAACTTGTGATTTCATCCAAGAGTTTGTCTCATGGATTAAGTATATTCCAAGAGGGAAAGTTCGGTGGCAAAGCTACAATGAAGCTGGAAGCACAGGTCGAATTTTCCAAGGAAGCAGGAAAGGAAGGGGCTGCTGGTGCGAATCCGGAAACAAAAGCTGAAAGCACTGCTCCTGAGAAAAAAAGTGGAGCAGAGACGGTAGCTTCATTGGTAAAACCAGAACCTTTAACCATAAAAACAGAATCTTCTGCTCCAAAAACAGATGCTGACAATCCAGTCCCAGCTTTGAAAGCTCCTGAAGTTCCCGATAATGAATTTGAGAAGCGAATAAGACCAGAGGTTATACCAGCCGATGAGATTGGTGTAACATTTTCTGATATCGGTGCTCTGGAGGAGATTAAAGAATCCCTTCAAGAATTAGTAATGCTCCCACTGCGGAGACCAGATCTTTTCAATGGAGGCCTTTTAAAGCCTTGTAGAGGTATATTGCTATTTGGTCCACCTGGTAGTGGGAAGACTATGCTGGCAAAGGCCATTGCTAGGGAGGCTGGAGCTAGCTTCATCAATGTATCCATGTCTACCATTACTTCCAAATGGTTTGGTGAAGATGAGAAAAATGTCCGAGCTTTGTTCACATTAGCATCCAAAGTCTCACCAACCATCATCTTTGTGGATGAAGTTGACAGCATGCTTGGGCAGAGAACCCGAGTGGGAGAGCATGAAGCCATGCGAAAGATAAAGAATGAATTTATGACTCATTGGGATGGTCTCATGACTAAACAGGGAGAGCGAATCCTTGTCCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATTATTAGGCGTTTTGAACGGAGAATATTGGTTGGGCTACCAACTGCAGAGAACAGAGAAATGATCATGAGGACTCTGCTGTCAAAAGAGAAGGTGGATGACCAGCTAGATTTCAAGGAGCTTGCAACTATGACGGAAGGATATAGTGGAAGTGATCTTAAGAATTTGTGCACCACAGCTGCCTATCGGCCTGTTAGGGAGTTAATACAGGCAGAGAGACAAAAGGATTTGGAGAAAAAGAAGAGAGCTGCAGAAGGACAAAATCAACAAGATGCTTCTGAAGAACGAAATCCAGAAGCCGTCTCGGATACAAAAGAAGAACAGAAAGAGGCAAGAGTGATCACCCTCAGGCCCCTTAATATGGAAGACTTCCGGCAGGCAAAGAATCAAGTTGCAGCTAGCTTTGCAGCTGAGGGAGCTAGTATGAATGAATTGAAGCAGTGGAATGACCTATATGGGGAAGGGGGGTCGAGAAAGAAGGAGCAGTTATCTTATTTCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017076 GO:0017111 GO:0019867 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045041 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

861

Amino Acids

95.65

Weight (kDa)

6.22

Isoelectric Point (pI)

39.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	371 - 431	1.4e-34	Domain of unknown function (DUF7751)
AAA	PF00004	576 - 706	5.3e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	730 - 773	1.8e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64110 AT1G64110 AT1G64110 AT1G64110 AT1G64110
fragaria_vesca	FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 FvH4_5g03560
malus_domestica	MD06G1095300.v1.1 MD14G1115400.v1.1
prunus_persica	Prupe.5G110200_v2.0.a1
pyrus_communis	pycom06g09190
rosa_chinensis	RchiOBHm_Chr7g0196151
rosa_laevigata	RLG00000004060
rosa_roxburghii	Rroxscaffold_3G00259730
rosa_rugosa	Rorug07G0030900 Rorug07G0030900 Rorug07G0030900
rosa_samantha	Rh7AG156900 Rh7BG158600 Rh7CG162400 Rh7DG157800
rosa_wichuraiana	Rw7G013400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	185, 1517, 2161
AccB7I	CCANNNNNTGG	1 cut(s)	1087
AccI	GTMKAC	2 cut(s)	16, 1820
AccIII	TCCGGA	2 cut(s)	887, 1387
AciI	CCGC	4 cut(s)	248, 582, 963, 1678
AclWI	GGATC	6 cut(s)	529, 591, 604, 895, 1164, 1217
AcsI	RAATTY	4 cut(s)	1343, 1556, 1988, 2245
AcuI	CTGAAG	3 cut(s)	284, 1560, 2382
AfaI	GTAC	2 cut(s)	448, 764
AfiI	CCNNNNNNNGG	8 cut(s)	766, 919, 1087, 1721, 1751, 1782, 2443, 2539
AflII	CTTAAG	2 cut(s)	710, 2240
AjnI	CCWGG	2 cut(s)	599, 1744
Alw21I	GWGCWC	2 cut(s)	1630, 2255
Alw26I	GTCTC	9 cut(s)	171, 936, 1275, 1430, 1675, 1897, 2015, 2293, 2389
Alw44I	GTGCAC	1 cut(s)	2251
AlwI	GGATC	6 cut(s)	529, 591, 604, 895, 1164, 1217
AlwNI	CAGNNNCTG	2 cut(s)	760, 1508
Ama87I	CYCGRG	3 cut(s)	228, 328, 1947
Aor13HI	TCCGGA	2 cut(s)	887, 1387
AoxI	GGCC	8 cut(s)	96, 249, 332, 1702, 1773, 2060, 2270, 2432
ApaLI	GTGCAC	1 cut(s)	2251
ApoI	RAATTY	4 cut(s)	1343, 1556, 1988, 2245
Asp700I	GAANNNNTTC	3 cut(s)	646, 691, 1650
AspLEI	GCGC	1 cut(s)	717
AspS9I	GGNCC	5 cut(s)	96, 332, 477, 1739, 2433
AsuC2I	CCSGG	1 cut(s)	292
AsuHPI	GGTGA	4 cut(s)	181, 1856, 1887, 2416
AsuNHI	GCTAGC	2 cut(s)	1796, 2480
AvaI	CYCGRG	3 cut(s)	228, 328, 1947
AvaII	GGWCC	2 cut(s)	477, 1739
AxyI	CCTNAGG	1 cut(s)	2429
BaeGI	GKGCMC	1 cut(s)	2255
BamHI	GGATCC	1 cut(s)	596
BarI	GAAGNNNNNNTAC	4 cut(s)	631, 661, 663, 693
BbsI	GAAGAC	3 cut(s)	1034, 1763, 2454
Bbv12I	GWGCWC	2 cut(s)	1630, 2255
BbvCI	CCTCAGC	2 cut(s)	273, 2493
BccI	CCATC	5 cut(s)	37, 164, 267, 1910, 2000
BceAI	ACGGC	2 cut(s)	136, 2366
BciT130I	CCWGG	2 cut(s)	601, 1746
BciVI	GTATCC	2 cut(s)	1822, 2383
BclI	TGATCA	2 cut(s)	2145, 2421
BcnI	CCSGG	1 cut(s)	292
BcoDI	GTCTC	9 cut(s)	171, 936, 1275, 1430, 1675, 1897, 2015, 2293, 2389
BfmI	CTRYAG	4 cut(s)	654, 937, 2127, 2331
BfrI	CTTAAG	2 cut(s)	710, 2240
BfuI	GTATCC	2 cut(s)	1822, 2383
BglII	AGATCT	2 cut(s)	839, 1687
Bme1390I	CCNGG	3 cut(s)	292, 601, 1746
Bme18I	GGWCC	2 cut(s)	477, 1739
BmeT110I	CYCGRG	3 cut(s)	228, 328, 1947
BmgT120I	GGNCC	5 cut(s)	96, 332, 477, 1739, 2433
BmiI	GGNNCC	5 cut(s)	333, 552, 598, 910, 2435
BmrFI	CCNGG	3 cut(s)	292, 601, 1746
BmsI	GCATC	5 cut(s)	141, 470, 1495, 1892, 2344
BmtI	GCTAGC	2 cut(s)	1800, 2484
BpiI	GAAGAC	3 cut(s)	1034, 1763, 2454
BplI	GAGNNNNNCTC	2 cut(s)	1255, 1287
BpmI	CTGGAG	3 cut(s)	114, 1652, 1812
Bpu10I	CCTNAGC	2 cut(s)	273, 2493
BpuMI	CCSGG	1 cut(s)	292
BsaI	GGTCTC	2 cut(s)	1675, 2015
BsaJI	CCNNGG	4 cut(s)	363, 600, 904, 1350
BsaWI	WCCGGW	2 cut(s)	887, 1387
Bsc4I	CCNNNNNNNGG	8 cut(s)	766, 919, 1087, 1721, 1751, 1782, 2443, 2539
Bse1I	ACTGG	2 cut(s)	454, 1517
Bse21I	CCTNAGG	1 cut(s)	2429
Bse3DI	GCAATG	2 cut(s)	1140, 1776
BseAI	TCCGGA	2 cut(s)	887, 1387
BseBI	CCWGG	2 cut(s)	601, 1746
BseDI	CCNNGG	4 cut(s)	363, 600, 904, 1350
BseGI	GGATG	6 cut(s)	48, 1256, 1883, 1921, 2011, 2185
BseLI	CCNNNNNNNGG	8 cut(s)	766, 919, 1087, 1721, 1751, 1782, 2443, 2539
BseMI	GCAATG	2 cut(s)	1140, 1776
BseMII	CTCAG	7 cut(s)	264, 695, 803, 1174, 1407, 2443, 2484
BseNI	ACTGG	2 cut(s)	454, 1517
BseRI	GAGGAG	1 cut(s)	1649
BseSI	GKGCMC	1 cut(s)	2255
BseYI	CCCAGC	1 cut(s)	1522
BshFI	GGCC	8 cut(s)	98, 251, 334, 1704, 1775, 2062, 2272, 2434
BsiHKAI	GWGCWC	2 cut(s)	1630, 2255
BsiHKCI	CYCGRG	3 cut(s)	228, 328, 1947
BsiSI	CCGG	6 cut(s)	99, 292, 305, 888, 1388, 2455
BslFI	GGGAC	4 cut(s)	618, 742, 830, 1505
BslI	CCNNNNNNNGG	8 cut(s)	766, 919, 1087, 1721, 1751, 1782, 2443, 2539
BsmAI	GTCTC	9 cut(s)	171, 936, 1275, 1430, 1675, 1897, 2015, 2293, 2389
BsmBI	CGTCTC	3 cut(s)	936, 1430, 2389
BsmFI	GGGAC	4 cut(s)	618, 742, 830, 1505
BsnI	GGCC	8 cut(s)	98, 251, 334, 1704, 1775, 2062, 2272, 2434
Bso31I	GGTCTC	2 cut(s)	1675, 2015
BsoBI	CYCGRG	3 cut(s)	228, 328, 1947
Bsp1286I	GDGCHC	2 cut(s)	1630, 2255
Bsp13I	TCCGGA	2 cut(s)	887, 1387
Bsp1407I	TGTACA	1 cut(s)	762
BspACI	CCGC	4 cut(s)	248, 582, 963, 1678
BspANI	GGCC	8 cut(s)	98, 251, 334, 1704, 1775, 2062, 2272, 2434
BspCNI	CTCAG	7 cut(s)	265, 694, 804, 1173, 1408, 2442, 2485
BspEI	TCCGGA	2 cut(s)	887, 1387
BspHI	TCATGA	2 cut(s)	2013, 2148
BspLI	GGNNCC	5 cut(s)	333, 552, 598, 910, 2435
BspMAI	CTGCAG	3 cut(s)	658, 2131, 2335
BspOI	GCTAGC	2 cut(s)	1800, 2484
BspPI	GGATC	6 cut(s)	529, 591, 604, 895, 1164, 1217
BspTI	CTTAAG	2 cut(s)	710, 2240
BspTNI	GGTCTC	2 cut(s)	1675, 2015
BsrDI	GCAATG	2 cut(s)	1140, 1776
BsrGI	TGTACA	1 cut(s)	762
BsrI	ACTGG	2 cut(s)	454, 1517
BssECI	CCNNGG	4 cut(s)	363, 600, 904, 1350
BssNAI	GTATAC	1 cut(s)	17
BssT1I	CCWWGG	3 cut(s)	363, 904, 1350
Bst1107I	GTATAC	1 cut(s)	17
Bst2UI	CCWGG	2 cut(s)	601, 1746
Bst4CI	ACNGT	4 cut(s)	182, 756, 1118, 1441
Bst6I	CTCTTC	3 cut(s)	260, 1170, 2318
BstAFI	CTTAAG	2 cut(s)	710, 2240
BstAPI	GCANNNNNTGC	1 cut(s)	151
BstAUI	TGTACA	1 cut(s)	762
BstC8I	GCNNGC	9 cut(s)	69, 336, 360, 1767, 1798, 1931, 2205, 2460, 2482
BstDEI	CTNAG	9 cut(s)	273, 282, 403, 681, 812, 1160, 1416, 2429, 2493
BstEII	GGTNACC	1 cut(s)	187
BstENI	CCTNNNNNAGG	2 cut(s)	764, 1719
BstF5I	GGATG	6 cut(s)	48, 1256, 1883, 1921, 2011, 2185
BstHHI	GCGC	1 cut(s)	717
BstMAI	GTCTC	9 cut(s)	171, 936, 1275, 1430, 1675, 1897, 2015, 2293, 2389
BstNI	CCWGG	2 cut(s)	601, 1746
BstNSI	RCATGY	1 cut(s)	1933
BstPI	GGTNACC	1 cut(s)	187
BstSCI	CCNGG	3 cut(s)	290, 599, 1744
BstSFI	CTRYAG	4 cut(s)	654, 937, 2127, 2331
BstSLI	GKGCMC	1 cut(s)	2255
BstV2I	GAAGAC	3 cut(s)	1034, 1763, 2454
BstX2I	RGATCY	5 cut(s)	596, 839, 1156, 1222, 1687
BstYI	RGATCY	5 cut(s)	596, 839, 1156, 1222, 1687
BstZ17I	GTATAC	1 cut(s)	17
Bsu36I	CCTNAGG	1 cut(s)	2429
BsuI	GTATCC	2 cut(s)	1822, 2383
BsuRI	GGCC	8 cut(s)	98, 251, 334, 1704, 1775, 2062, 2272, 2434
BtsCI	GGATG	6 cut(s)	48, 1256, 1883, 1921, 2011, 2185
BtsI	GCAGTG	3 cut(s)	1407, 1673, 2528
BtsIMutI	CAGTG	3 cut(s)	1407, 1673, 2528
Cac8I	GCNNGC	9 cut(s)	69, 336, 360, 1767, 1798, 1931, 2205, 2460, 2482
CaiI	CAGNNNCTG	2 cut(s)	760, 1508
CciI	TCATGA	2 cut(s)	2013, 2148
CfoI	GCGC	1 cut(s)	717
Cfr13I	GGNCC	5 cut(s)	96, 332, 477, 1739, 2433
CsiI	ACCWGGT	1 cut(s)	1744
Csp6I	GTAC	2 cut(s)	447, 763
CspCI	CAANNNNNGTGG	2 cut(s)	781, 816
CviAII	CATG	7 cut(s)	1274, 1816, 1930, 1961, 1969, 2014, 2149
CviQI	GTAC	2 cut(s)	447, 763
DdeI	CTNAG	9 cut(s)	273, 282, 403, 681, 812, 1160, 1416, 2429, 2493
DraI	TTTAAA	2 cut(s)	472, 1710
DrdI	GACNNNNNNGTC	3 cut(s)	185, 1517, 2161
DseDI	GACNNNNNNGTC	3 cut(s)	185, 1517, 2161
Eam1104I	CTCTTC	3 cut(s)	260, 1170, 2318
EarI	CTCTTC	3 cut(s)	260, 1170, 2318
Eco130I	CCWWGG	3 cut(s)	363, 904, 1350
Eco147I	AGGCCT	1 cut(s)	1704
Eco31I	GGTCTC	2 cut(s)	1675, 2015
Eco32I	GATATC	1 cut(s)	1621
Eco47I	GGWCC	2 cut(s)	477, 1739
Eco57I	CTGAAG	3 cut(s)	284, 1560, 2382
Eco81I	CCTNAGG	1 cut(s)	2429
Eco88I	CYCGRG	3 cut(s)	228, 328, 1947
Eco91I	GGTNACC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	2 cut(s)	764, 1719
EcoO109I	RGGNCCY	2 cut(s)	332, 2433
EcoO65I	GGTNACC	1 cut(s)	187
EcoRII	CCWGG	2 cut(s)	599, 1744
EcoRV	GATATC	1 cut(s)	1621
EcoT14I	CCWWGG	3 cut(s)	363, 904, 1350
ErhI	CCWWGG	3 cut(s)	363, 904, 1350
Esp3I	CGTCTC	3 cut(s)	936, 1430, 2389
FaeI	CATG	7 cut(s)	1277, 1819, 1933, 1964, 1972, 2017, 2152
FalI	AAGNNNNNCTT	6 cut(s)	176, 208, 466, 498, 1635, 1667
FaqI	GGGAC	4 cut(s)	618, 742, 830, 1505
FatI	CATG	7 cut(s)	1273, 1815, 1929, 1960, 1968, 2013, 2148
FbaI	TGATCA	2 cut(s)	2145, 2421
FblI	GTMKAC	2 cut(s)	16, 1820
FokI	GGATG	6 cut(s)	55, 1243, 1870, 1928, 2018, 2192
GlaI	GCGC	1 cut(s)	716
GsaI	CCCAGC	1 cut(s)	1526
GsuI	CTGGAG	3 cut(s)	114, 1652, 1812
HaeIII	GGCC	8 cut(s)	98, 251, 334, 1704, 1775, 2062, 2272, 2434
HapII	CCGG	6 cut(s)	99, 292, 305, 888, 1388, 2455
HhaI	GCGC	1 cut(s)	717
Hin1II	CATG	7 cut(s)	1277, 1819, 1933, 1964, 1972, 2017, 2152
Hin6I	GCGC	1 cut(s)	715
HinP1I	GCGC	1 cut(s)	715
HincII	GTYRAC	2 cut(s)	240, 1924
HindII	GTYRAC	2 cut(s)	240, 1924
HindIII	AAGCTT	1 cut(s)	632
HpaI	GTTAAC	1 cut(s)	240
HpaII	CCGG	6 cut(s)	99, 292, 305, 888, 1388, 2455
HphI	GGTGA	4 cut(s)	181, 1856, 1887, 2416
Hpy166II	GTNNAC	8 cut(s)	17, 240, 480, 1742, 1821, 1875, 1924, 2253
Hpy8I	GTNNAC	8 cut(s)	17, 240, 480, 1742, 1821, 1875, 1924, 2253
HpyCH4III	ACNGT	4 cut(s)	182, 756, 1118, 1441
HpyCH4IV	ACGT	1 cut(s)	945
HpyCH4V	TGCA	9 cut(s)	656, 1140, 2051, 2129, 2207, 2253, 2333, 2477, 2489
HpyF3I	CTNAG	9 cut(s)	273, 282, 403, 681, 812, 1160, 1416, 2429, 2493
HpySE526I	ACGT	1 cut(s)	945
Hsp92II	CATG	7 cut(s)	1277, 1819, 1933, 1964, 1972, 2017, 2152
HspAI	GCGC	1 cut(s)	715
Kpn2I	TCCGGA	2 cut(s)	887, 1387
Ksp22I	TGATCA	2 cut(s)	2145, 2421
KspAI	GTTAAC	1 cut(s)	240
LweI	GCATC	5 cut(s)	141, 470, 1495, 1892, 2344
MabI	ACCWGGT	1 cut(s)	1744
MaeII	ACGT	1 cut(s)	945
MaeIII	GTNAC	6 cut(s)	187, 409, 668, 1008, 1163, 1606
MflI	RGATCY	5 cut(s)	596, 839, 1156, 1222, 1687
MhlI	GDGCHC	2 cut(s)	1630, 2255
MlyI	GAGTC	7 cut(s)	63, 220, 319, 1016, 1024, 1990, 2149
MmeI	TCCRAC	2 cut(s)	31, 855
MroI	TCCGGA	2 cut(s)	887, 1387
MroXI	GAANNNNTTC	3 cut(s)	646, 691, 1650
MslI	CAYNNNNRTG	2 cut(s)	1910, 2004
MspA1I	CMGCKG	5 cut(s)	582, 726, 1193, 2261, 2492
MspCI	CTTAAG	2 cut(s)	710, 2240
MspI	CCGG	6 cut(s)	99, 292, 305, 888, 1388, 2455
MspR9I	CCNGG	3 cut(s)	292, 601, 1746
MvaI	CCWGG	2 cut(s)	601, 1746
NciI	CCSGG	1 cut(s)	292
NheI	GCTAGC	2 cut(s)	1796, 2480
NlaIII	CATG	7 cut(s)	1277, 1819, 1933, 1964, 1972, 2017, 2152
NlaIV	GGNNCC	5 cut(s)	333, 552, 598, 910, 2435
NmuCI	GTSAC	3 cut(s)	187, 1008, 1163
NspI	RCATGY	1 cut(s)	1933
PaeI	GCATGC	1 cut(s)	1933
PaeR7I	CTCGAG	1 cut(s)	228
PagI	TCATGA	2 cut(s)	2013, 2148
PceI	AGGCCT	1 cut(s)	1704
PcsI	WCGNNNNNNNCGW	1 cut(s)	80
PdmI	GAANNNNTTC	3 cut(s)	646, 691, 1650
PfeI	GAWTC	8 cut(s)	295, 430, 1057, 1384, 1484, 1646, 2034, 2467
PflMI	CCANNNNNTGG	1 cut(s)	1087
PleI	GAGTC	7 cut(s)	62, 220, 318, 1015, 1024, 1990, 2149
PpsI	GAGTC	7 cut(s)	62, 220, 318, 1015, 1024, 1990, 2149
Psp6I	CCWGG	2 cut(s)	599, 1744
PspEI	GGTNACC	1 cut(s)	187
PspFI	CCCAGC	1 cut(s)	1522
PspGI	CCWGG	2 cut(s)	599, 1744
PspN4I	GGNNCC	5 cut(s)	333, 552, 598, 910, 2435
PspPI	GGNCC	5 cut(s)	96, 332, 477, 1739, 2433
PspXI	VCTCGAGB	1 cut(s)	228
PstI	CTGCAG	3 cut(s)	658, 2131, 2335
PstNI	CAGNNNCTG	2 cut(s)	760, 1508
PsuI	RGATCY	5 cut(s)	596, 839, 1156, 1222, 1687
PvuII	CAGCTG	4 cut(s)	726, 1193, 2261, 2492
RsaI	GTAC	2 cut(s)	448, 764
RsaNI	GTAC	2 cut(s)	447, 763
RseI	CAYNNNNRTG	2 cut(s)	1910, 2004
Sau96I	GGNCC	5 cut(s)	96, 332, 477, 1739, 2433
SchI	GAGTC	7 cut(s)	63, 220, 319, 1016, 1024, 1990, 2149
ScrFI	CCNGG	3 cut(s)	292, 601, 1746
SduI	GDGCHC	2 cut(s)	1630, 2255
SexAI	ACCWGGT	1 cut(s)	1744
SfaNI	GCATC	5 cut(s)	141, 470, 1495, 1892, 2344
SfcI	CTRYAG	4 cut(s)	654, 937, 2127, 2331
Sfr274I	CTCGAG	1 cut(s)	228
SinI	GGWCC	2 cut(s)	477, 1739
SlaI	CTCGAG	1 cut(s)	228
SmiMI	CAYNNNNRTG	2 cut(s)	1910, 2004
SmlI	CTYRAG	3 cut(s)	228, 710, 2240
SmoI	CTYRAG	3 cut(s)	228, 710, 2240
SphI	GCATGC	1 cut(s)	1933
SseBI	AGGCCT	1 cut(s)	1704
SsiI	CCGC	4 cut(s)	248, 582, 963, 1678
SspI	AATATT	1 cut(s)	2109
StuI	AGGCCT	1 cut(s)	1704
StyD4I	CCNGG	3 cut(s)	290, 599, 1744
StyI	CCWWGG	3 cut(s)	363, 904, 1350
TaaI	ACNGT	4 cut(s)	182, 756, 1118, 1441
TaiI	ACGT	1 cut(s)	948
TaqI	TCGA	7 cut(s)	195, 229, 822, 984, 1113, 1341, 2552
TaqII	GACCGA	1 cut(s)	47
TatI	WGTACW	1 cut(s)	762
TauI	GCSGC	1 cut(s)	251
TfiI	GAWTC	8 cut(s)	295, 430, 1057, 1384, 1484, 1646, 2034, 2467
TscAI	CASTG	3 cut(s)	1414, 1680, 2528
TseFI	GTSAC	3 cut(s)	187, 1008, 1163
Tsp45I	GTSAC	3 cut(s)	187, 1008, 1163
TspGWI	ACGGA	2 cut(s)	2116, 2231
TspRI	CASTG	3 cut(s)	1414, 1680, 2528
Van91I	CCANNNNNTGG	1 cut(s)	1087
Vha464I	CTTAAG	2 cut(s)	710, 2240
VneI	GTGCAC	1 cut(s)	2251
VpaK11BI	GGWCC	2 cut(s)	477, 1739
XagI	CCTNNNNNAGG	2 cut(s)	764, 1719
XapI	RAATTY	4 cut(s)	1343, 1556, 1988, 2245
XbaI	TCTAGA	1 cut(s)	836
XceI	RCATGY	1 cut(s)	1933
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1909
XhoI	CTCGAG	1 cut(s)	228
XmiI	GTMKAC	2 cut(s)	16, 1820
XmnI	GAANNNNTTC	3 cut(s)	646, 691, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.