Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0007626

Physical Location & Seq

Genomic Coordinates Forward (+)

12757730 .. 12763592

Gene Structure 5863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG156900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGAATGAATTGATTTACAGTGAACAGACTCGAGTGTTGTTAACGAGTGCGGCCTATGTCCATCTGAAGAGGGCTGAGGTTTCTAAGTACACCCGGAATCTTTCTCCGGCGAGTCGGGCTATTTTGCTCTCGGGGCCTGCTGAACTCTACCAACAACTGCTTGCCAAGGCTTTAGCCCATTACTTCCAAGCCAAGTTGCTGCTCTTAGATGTAACAGATTTTTCATTAAAGATTCAGAGCAAATATGGTACTGGCAATAAAGCATCTGCTTTTAAAAGGTCCACTTCGGAGATGACACTAGATCGGCTCTCTGGTCTATTTGGATCATTTTCAATTTTTCCTCAAAAGGAGGAACCCAAAGGCACATTACGAAGGCAAAGCAGCGGTGTGGATTTAGGATCCAGGGGACTAGAAGGTTCTAAAAATGCTCCAAAGCTTCGTAGAAATGCTTCTGCTGCAGCTAATATCAGTAACCTTGCTTCTCAGGGAACTCCTTCAAATCCAGCTTCTCATAAGCGCACAAGCAGCTGGTCTTTTGATGAAAGACTTTTCATACAGTCCCTGTACAAGGTCTTGGTTTATGTTTCAAAAACCACTCCCATTGTGCTGTATCTGAGGGACATCGACAACATCTTATCTAGATCTCAAAGGATATATAACTTGTTCCAGAAAATGTTGGATAAATTATCCGGAGCTGTGCTGATCCTTGGTTCCCGAATTGTGGATTTGGATAATGACTACAGAGACGTTGATGACAGGCTTACCGCGCTTTTCCCTTACAACATTGAGATCAGACCTCCTGAAAATGAGTCACATCTTGTTAGCTGGAAGACTCAACTAGAGGAAGATATGAAGATGATTCAGGTTCAGGATAACAAAAACCACATTATGGAAGTCCTTTCAGCTAATGATCTCGACTGTGATGATCTAGGTTCAATTTGCATTGCCGACACAATGGATCTCAGTCACTATATAGAAGAGATTGTGGTATCAGCTGTTTCTTATCATTTAATGAATAACAGAGATCCTGAGTATAGAAATGGAAAACTTGTGATTTCATCCAAGAGTTTGTCTCATGGATTAAGTATATTCCAAGAGGGAAAGTTCGGTGGCAAAGCTACAATGAAGCTGGAAGCACAGGCCGAATTTTCCAAGGAAGCAGGAAAGGAAGGGGCTGCTGGTGCGAATCCGGAAACAAAAGCTGAAAGCACTGCTCCTGAGAAAAAAACTGGAGCAGAGACGGTAGCTTCATTGGTAAAACCAGAACCTTTAACCATAAAAACAGAATCTTCTGCACCAAAAACAGATGCTGACAATCCAGTCCCAGCTTTTAAAGCTCCTGAAGTTCCCGATAATGAATTTGAGAAGCGAATAAGACCAGAGGTCATACCAGCCGATGAGATTGGTGTAACATTTTCTGATATCGGTGCTCTGGAGGAGATTAAAGAATCCCTTCAAGAATTAGTAATGCTCCCACTGCGGAGACCAGATCTTTTCAATGGAGGCCTTTTAAAGCCTTGTAGAGGTATATTGCTATTTGGTCCACCTGGTAGTGGGAAGACTATGCTGGCAAAGGCCATTGCTAGGGAGGCTGGAGCTAGCTTCATCAATGTATCCATGTCTACCATTACTTCCAAATGGTTTGGTGAAGATGAGAAAAATGTCCGAGCTTTGTTCACATTAGCATCCAAAGTCTCTCCAACTATCATCTTTGTGGATGAAGTTGACAGCATGCTTGGGCAGAGAACCCGAGTGGGAGAGCATGAAGCCATGCGAAAGATAAAGAATGAATTTATGACTCATTGGGATGGTCTCATGACTAAACAAGGAGAGCGGATCCTTGTCCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATTATTAGGCGTTTTGAACGGAGAATATTGGTTGGGCTACCAACTGCAGAGAACAGAGAAATGATCATGAGGACTCTGCTGTCAAAAGAGAAGGTGGATGACCAGCTAGATTTCAAGGAGCTTGCAACTATGACTGAAGGATATAGTGGAAGTGATCTTAAGAATTTGTGCACCACAGCTGCCTATCGGCCTGTTAGAGAGTTAATACAGGCAGAGAGACAAAAGGATTTGGAGAAAAAGAAGAGAGCTGCAGAAGGACAAAATCAACAAGATGCTTCTGAAGAACGAAATCCAGAAGCCGTCTCAGATACAAAAGAAGAACAGAAAGAGGCAAGAGTGATCACCCTCAGGCCCCTTAATATGGAAGACTTCCGGCAGGCAAAGAATCAAGTTGCGGCTAGCTTTGCAGCTGAGGGAGCCAGTATGAATGAATTGAAGCAGTGGAATGACCTATATGGGGAAGGGGGGTCGAGAAAGAAGGAGCAGTTATCTTATTTCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017076 GO:0017111 GO:0019867 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045041 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

795

Amino Acids

88.76

Weight (kDa)

6.33

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	305 - 365	1.2e-34	Domain of unknown function (DUF7751)
AAA	PF00004	510 - 640	4.7e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	664 - 707	1.6e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64110 AT1G64110 AT1G64110 AT1G64110 AT1G64110
fragaria_vesca	FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 FvH4_5g03560
malus_domestica	MD06G1095300.v1.1 MD14G1115400.v1.1
prunus_persica	Prupe.5G110200_v2.0.a1
pyrus_communis	pycom06g09190
rosa_chinensis	RchiOBHm_Chr7g0196151
rosa_laevigata	RLG00000004060
rosa_roxburghii	Rroxscaffold_3G00259730
rosa_rugosa	Rorug07G0030900 Rorug07G0030900 Rorug07G0030900
rosa_samantha	Rh7AG156900 Rh7BG158600 Rh7CG162400 Rh7DG157800
rosa_wichuraiana	Rw7G013400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1319, 1963
AccB7I	CCANNNNNTGG	1 cut(s)	889
AccBSI	CCGCTC	1 cut(s)	1834
AccI	GTMKAC	1 cut(s)	1622
AccII	CGCG	1 cut(s)	767
AccIII	TCCGGA	2 cut(s)	689, 1189
AciI	CCGC	6 cut(s)	50, 384, 765, 1480, 1834, 2279
AclWI	GGATC	8 cut(s)	331, 393, 406, 697, 966, 1019, 1831, 1844
AcsI	RAATTY	4 cut(s)	1145, 1358, 1790, 2047
AcuI	CTGAAG	4 cut(s)	86, 1362, 2040, 2184
AfaI	GTAC	3 cut(s)	89, 250, 566
AfiI	CCNNNNNNNGG	8 cut(s)	568, 721, 889, 1523, 1553, 1584, 2245, 2341
AflII	CTTAAG	1 cut(s)	2042
AgsI	TTSAA	9 cut(s)	333, 498, 588, 936, 1457, 1498, 1901, 1999, 2320
AhdI	GACNNNNNGTC	1 cut(s)	1382
AjnI	CCWGG	2 cut(s)	401, 1546
Alw21I	GWGCWC	2 cut(s)	1432, 2057
Alw26I	GTCTC	8 cut(s)	738, 1077, 1232, 1477, 1699, 1817, 2095, 2191
Alw44I	GTGCAC	1 cut(s)	2053
AlwI	GGATC	8 cut(s)	331, 393, 406, 697, 966, 1019, 1831, 1844
AlwNI	CAGNNNCTG	2 cut(s)	562, 1310
Ama87I	CYCGRG	3 cut(s)	30, 130, 1749
Aor13HI	TCCGGA	2 cut(s)	689, 1189
AoxI	GGCC	8 cut(s)	51, 134, 1140, 1504, 1575, 1862, 2072, 2234
ApaLI	GTGCAC	1 cut(s)	2053
ApoI	RAATTY	4 cut(s)	1145, 1358, 1790, 2047
Asp700I	GAANNNNTTC	3 cut(s)	448, 493, 1452
AspLEI	GCGC	2 cut(s)	519, 769
AspS9I	GGNCC	4 cut(s)	134, 279, 1541, 2235
AsuC2I	CCSGG	1 cut(s)	94
AsuHPI	GGTGA	2 cut(s)	1658, 2218
AsuNHI	GCTAGC	2 cut(s)	1598, 2282
AvaI	CYCGRG	3 cut(s)	30, 130, 1749
AvaII	GGWCC	2 cut(s)	279, 1541
AxyI	CCTNAGG	1 cut(s)	2231
BaeGI	GKGCMC	1 cut(s)	2057
BamHI	GGATCC	2 cut(s)	398, 1836
BarI	GAAGNNNNNNTAC	4 cut(s)	433, 463, 465, 495
BbsI	GAAGAC	3 cut(s)	836, 1565, 2256
Bbv12I	GWGCWC	2 cut(s)	1432, 2057
BbvCI	CCTCAGC	2 cut(s)	75, 2295
BccI	CCATC	2 cut(s)	69, 1802
BceAI	ACGGC	1 cut(s)	2168
BciT130I	CCWGG	2 cut(s)	403, 1548
BciVI	GTATCC	1 cut(s)	1624
BclI	TGATCA	2 cut(s)	1947, 2223
BcnI	CCSGG	1 cut(s)	94
BcoDI	GTCTC	8 cut(s)	738, 1077, 1232, 1477, 1699, 1817, 2095, 2191
BfaI	CTAG	9 cut(s)	299, 410, 639, 839, 929, 1584, 1599, 1991, 2283
BfmI	CTRYAG	4 cut(s)	456, 739, 1929, 2133
BfrI	CTTAAG	1 cut(s)	2042
BfuI	GTATCC	1 cut(s)	1624
BglII	AGATCT	2 cut(s)	641, 1489
Bme1390I	CCNGG	3 cut(s)	94, 403, 1548
Bme18I	GGWCC	2 cut(s)	279, 1541
BmeRI	GACNNNNNGTC	1 cut(s)	1382
BmeT110I	CYCGRG	3 cut(s)	30, 130, 1749
BmgT120I	GGNCC	4 cut(s)	134, 279, 1541, 2235
BmiI	GGNNCC	7 cut(s)	135, 354, 400, 712, 1838, 2237, 2302
BmrFI	CCNGG	3 cut(s)	94, 403, 1548
BmsI	GCATC	4 cut(s)	272, 1297, 1694, 2146
BmtI	GCTAGC	2 cut(s)	1602, 2286
BpiI	GAAGAC	3 cut(s)	836, 1565, 2256
BplI	GAGNNNNNCTC	2 cut(s)	1057, 1089
BpmI	CTGGAG	3 cut(s)	1251, 1454, 1614
Bpu10I	CCTNAGC	2 cut(s)	75, 2295
BpuMI	CCSGG	1 cut(s)	94
BsaI	GGTCTC	2 cut(s)	1477, 1817
BsaJI	CCNNGG	4 cut(s)	165, 402, 706, 1152
BsaWI	WCCGGW	2 cut(s)	689, 1189
Bsc4I	CCNNNNNNNGG	8 cut(s)	568, 721, 889, 1523, 1553, 1584, 2245, 2341
Bse1I	ACTGG	4 cut(s)	256, 1234, 1319, 2304
Bse21I	CCTNAGG	1 cut(s)	2231
Bse3DI	GCAATG	2 cut(s)	942, 1578
BseAI	TCCGGA	2 cut(s)	689, 1189
BseBI	CCWGG	2 cut(s)	403, 1548
BseDI	CCNNGG	4 cut(s)	165, 402, 706, 1152
BseGI	GGATG	5 cut(s)	1058, 1685, 1723, 1813, 1987
BseLI	CCNNNNNNNGG	8 cut(s)	568, 721, 889, 1523, 1553, 1584, 2245, 2341
BseMI	GCAATG	2 cut(s)	942, 1578
BseMII	CTCAG	9 cut(s)	66, 497, 605, 976, 1020, 1209, 2202, 2245, 2286
BseNI	ACTGG	4 cut(s)	256, 1234, 1319, 2304
BseRI	GAGGAG	1 cut(s)	1451
BseSI	GKGCMC	1 cut(s)	2057
BseYI	CCCAGC	1 cut(s)	1324
BsgI	GTGCAG	1 cut(s)	1278
Bsh1236I	CGCG	1 cut(s)	767
BshFI	GGCC	8 cut(s)	53, 136, 1142, 1506, 1577, 1864, 2074, 2236
BsiHKAI	GWGCWC	2 cut(s)	1432, 2057
BsiHKCI	CYCGRG	3 cut(s)	30, 130, 1749
BsiSI	CCGG	5 cut(s)	94, 107, 690, 1190, 2257
BslFI	GGGAC	4 cut(s)	420, 544, 632, 1307
BslI	CCNNNNNNNGG	8 cut(s)	568, 721, 889, 1523, 1553, 1584, 2245, 2341
BsmAI	GTCTC	8 cut(s)	738, 1077, 1232, 1477, 1699, 1817, 2095, 2191
BsmBI	CGTCTC	3 cut(s)	738, 1232, 2191
BsmFI	GGGAC	4 cut(s)	420, 544, 632, 1307
BsnI	GGCC	8 cut(s)	53, 136, 1142, 1506, 1577, 1864, 2074, 2236
Bso31I	GGTCTC	2 cut(s)	1477, 1817
BsoBI	CYCGRG	3 cut(s)	30, 130, 1749
Bsp1286I	GDGCHC	2 cut(s)	1432, 2057
Bsp13I	TCCGGA	2 cut(s)	689, 1189
Bsp1407I	TGTACA	1 cut(s)	564
BspACI	CCGC	6 cut(s)	50, 384, 765, 1480, 1834, 2279
BspANI	GGCC	8 cut(s)	53, 136, 1142, 1506, 1577, 1864, 2074, 2236
BspCNI	CTCAG	9 cut(s)	67, 496, 606, 975, 1021, 1210, 2201, 2244, 2287
BspEI	TCCGGA	2 cut(s)	689, 1189
BspFNI	CGCG	1 cut(s)	767
BspHI	TCATGA	2 cut(s)	1815, 1950
BspLI	GGNNCC	7 cut(s)	135, 354, 400, 712, 1838, 2237, 2302
BspMAI	CTGCAG	3 cut(s)	460, 1933, 2137
BspOI	GCTAGC	2 cut(s)	1602, 2286
BspPI	GGATC	8 cut(s)	331, 393, 406, 697, 966, 1019, 1831, 1844
BspTI	CTTAAG	1 cut(s)	2042
BspTNI	GGTCTC	2 cut(s)	1477, 1817
BsrBI	CCGCTC	1 cut(s)	1834
BsrDI	GCAATG	2 cut(s)	942, 1578
BsrGI	TGTACA	1 cut(s)	564
BsrI	ACTGG	4 cut(s)	256, 1234, 1319, 2304
BssECI	CCNNGG	4 cut(s)	165, 402, 706, 1152
BssT1I	CCWWGG	3 cut(s)	165, 706, 1152
Bst2UI	CCWGG	2 cut(s)	403, 1548
Bst4CI	ACNGT	4 cut(s)	20, 558, 920, 1243
Bst6I	CTCTTC	3 cut(s)	62, 972, 2120
BstAFI	CTTAAG	1 cut(s)	2042
BstAUI	TGTACA	1 cut(s)	564
BstC8I	GCNNGC	8 cut(s)	138, 162, 1569, 1600, 1733, 2007, 2262, 2284
BstENI	CCTNNNNNAGG	2 cut(s)	566, 1521
BstF5I	GGATG	5 cut(s)	1058, 1685, 1723, 1813, 1987
BstFNI	CGCG	1 cut(s)	767
BstHHI	GCGC	2 cut(s)	519, 769
BstMAI	GTCTC	8 cut(s)	738, 1077, 1232, 1477, 1699, 1817, 2095, 2191
BstNI	CCWGG	2 cut(s)	403, 1548
BstNSI	RCATGY	1 cut(s)	1735
BstSCI	CCNGG	3 cut(s)	92, 401, 1546
BstSFI	CTRYAG	4 cut(s)	456, 739, 1929, 2133
BstSLI	GKGCMC	1 cut(s)	2057
BstUI	CGCG	1 cut(s)	767
BstV2I	GAAGAC	3 cut(s)	836, 1565, 2256
BstX2I	RGATCY	6 cut(s)	398, 641, 958, 1024, 1489, 1836
BstYI	RGATCY	6 cut(s)	398, 641, 958, 1024, 1489, 1836
Bsu36I	CCTNAGG	1 cut(s)	2231
BsuI	GTATCC	1 cut(s)	1624
BsuRI	GGCC	8 cut(s)	53, 136, 1142, 1506, 1577, 1864, 2074, 2236
BtsCI	GGATG	5 cut(s)	1058, 1685, 1723, 1813, 1987
BtsI	GCAGTG	3 cut(s)	1209, 1475, 2330
BtsIMutI	CAGTG	4 cut(s)	25, 1209, 1475, 2330
Cac8I	GCNNGC	8 cut(s)	138, 162, 1569, 1600, 1733, 2007, 2262, 2284
CaiI	CAGNNNCTG	2 cut(s)	562, 1310
CciI	TCATGA	2 cut(s)	1815, 1950
CfoI	GCGC	2 cut(s)	519, 769
Cfr13I	GGNCC	4 cut(s)	134, 279, 1541, 2235
CsiI	ACCWGGT	1 cut(s)	1546
Csp6I	GTAC	3 cut(s)	88, 249, 565
CspCI	CAANNNNNGTGG	2 cut(s)	583, 618
CviAII	CATG	7 cut(s)	1076, 1618, 1732, 1763, 1771, 1816, 1951
CviQI	GTAC	3 cut(s)	88, 249, 565
DraI	TTTAAA	3 cut(s)	274, 1333, 1512
DrdI	GACNNNNNNGTC	2 cut(s)	1319, 1963
DriI	GACNNNNNGTC	1 cut(s)	1382
DseDI	GACNNNNNNGTC	2 cut(s)	1319, 1963
Eam1104I	CTCTTC	3 cut(s)	62, 972, 2120
Eam1105I	GACNNNNNGTC	1 cut(s)	1382
EarI	CTCTTC	3 cut(s)	62, 972, 2120
Eco130I	CCWWGG	3 cut(s)	165, 706, 1152
Eco147I	AGGCCT	1 cut(s)	1506
Eco31I	GGTCTC	2 cut(s)	1477, 1817
Eco32I	GATATC	1 cut(s)	1423
Eco47I	GGWCC	2 cut(s)	279, 1541
Eco57I	CTGAAG	4 cut(s)	86, 1362, 2040, 2184
Eco81I	CCTNAGG	1 cut(s)	2231
Eco88I	CYCGRG	3 cut(s)	30, 130, 1749
EcoNI	CCTNNNNNAGG	2 cut(s)	566, 1521
EcoO109I	RGGNCCY	2 cut(s)	134, 2235
EcoRII	CCWGG	2 cut(s)	401, 1546
EcoRV	GATATC	1 cut(s)	1423
EcoT14I	CCWWGG	3 cut(s)	165, 706, 1152
ErhI	CCWWGG	3 cut(s)	165, 706, 1152
Esp3I	CGTCTC	3 cut(s)	738, 1232, 2191
FaeI	CATG	7 cut(s)	1079, 1621, 1735, 1766, 1774, 1819, 1954
FalI	AAGNNNNNCTT	4 cut(s)	268, 300, 1437, 1469
FaqI	GGGAC	4 cut(s)	420, 544, 632, 1307
FatI	CATG	7 cut(s)	1075, 1617, 1731, 1762, 1770, 1815, 1950
FbaI	TGATCA	2 cut(s)	1947, 2223
FblI	GTMKAC	1 cut(s)	1622
FokI	GGATG	5 cut(s)	1045, 1672, 1730, 1820, 1994
FspBI	CTAG	9 cut(s)	299, 410, 639, 839, 929, 1584, 1599, 1991, 2283
GlaI	GCGC	2 cut(s)	518, 768
GsaI	CCCAGC	1 cut(s)	1328
GsuI	CTGGAG	3 cut(s)	1251, 1454, 1614
HaeIII	GGCC	8 cut(s)	53, 136, 1142, 1506, 1577, 1864, 2074, 2236
HapII	CCGG	5 cut(s)	94, 107, 690, 1190, 2257
HhaI	GCGC	2 cut(s)	519, 769
Hin1II	CATG	7 cut(s)	1079, 1621, 1735, 1766, 1774, 1819, 1954
Hin6I	GCGC	2 cut(s)	517, 767
HinP1I	GCGC	2 cut(s)	517, 767
HincII	GTYRAC	2 cut(s)	42, 1726
HindII	GTYRAC	2 cut(s)	42, 1726
HindIII	AAGCTT	1 cut(s)	434
HpaI	GTTAAC	1 cut(s)	42
HpaII	CCGG	5 cut(s)	94, 107, 690, 1190, 2257
HphI	GGTGA	2 cut(s)	1658, 2218
Hpy166II	GTNNAC	9 cut(s)	23, 42, 90, 282, 1544, 1623, 1677, 1726, 2055
Hpy188I	TCNGA	9 cut(s)	66, 237, 289, 615, 794, 1420, 1667, 2164, 2191
Hpy8I	GTNNAC	9 cut(s)	23, 42, 90, 282, 1544, 1623, 1677, 1726, 2055
HpyCH4III	ACNGT	4 cut(s)	20, 558, 920, 1243
HpyCH4IV	ACGT	1 cut(s)	747
HpyCH4V	TGCA	9 cut(s)	458, 942, 1295, 1853, 1931, 2009, 2055, 2135, 2291
HpySE526I	ACGT	1 cut(s)	747
Hsp92II	CATG	7 cut(s)	1079, 1621, 1735, 1766, 1774, 1819, 1954
HspAI	GCGC	2 cut(s)	517, 767
Kpn2I	TCCGGA	2 cut(s)	689, 1189
Ksp22I	TGATCA	2 cut(s)	1947, 2223
KspAI	GTTAAC	1 cut(s)	42
LweI	GCATC	4 cut(s)	272, 1297, 1694, 2146
MabI	ACCWGGT	1 cut(s)	1546
MaeI	CTAG	9 cut(s)	299, 410, 639, 839, 929, 1584, 1599, 1991, 2283
MaeII	ACGT	1 cut(s)	747
MaeIII	GTNAC	5 cut(s)	211, 470, 810, 965, 1408
MbiI	CCGCTC	1 cut(s)	1834
MflI	RGATCY	6 cut(s)	398, 641, 958, 1024, 1489, 1836
MhlI	GDGCHC	2 cut(s)	1432, 2057
MlyI	GAGTC	6 cut(s)	22, 121, 818, 826, 1792, 1951
MmeI	TCCRAC	2 cut(s)	657, 1724
MroI	TCCGGA	2 cut(s)	689, 1189
MroXI	GAANNNNTTC	3 cut(s)	448, 493, 1452
MslI	CAYNNNNRTG	2 cut(s)	1712, 1806
MspA1I	CMGCKG	5 cut(s)	384, 528, 995, 2063, 2294
MspCI	CTTAAG	1 cut(s)	2042
MspI	CCGG	5 cut(s)	94, 107, 690, 1190, 2257
MspR9I	CCNGG	3 cut(s)	94, 403, 1548
MvaI	CCWGG	2 cut(s)	403, 1548
MvnI	CGCG	1 cut(s)	767
NciI	CCSGG	1 cut(s)	94
NheI	GCTAGC	2 cut(s)	1598, 2282
NlaIII	CATG	7 cut(s)	1079, 1621, 1735, 1766, 1774, 1819, 1954
NlaIV	GGNNCC	7 cut(s)	135, 354, 400, 712, 1838, 2237, 2302
NmuCI	GTSAC	2 cut(s)	810, 965
NspI	RCATGY	1 cut(s)	1735
PaeI	GCATGC	1 cut(s)	1735
PaeR7I	CTCGAG	1 cut(s)	30
PagI	TCATGA	2 cut(s)	1815, 1950
PceI	AGGCCT	1 cut(s)	1506
PdmI	GAANNNNTTC	3 cut(s)	448, 493, 1452
PfeI	GAWTC	7 cut(s)	97, 232, 859, 1186, 1286, 1448, 2269
PflMI	CCANNNNNTGG	1 cut(s)	889
PleI	GAGTC	6 cut(s)	22, 120, 817, 826, 1792, 1951
PpsI	GAGTC	6 cut(s)	22, 120, 817, 826, 1792, 1951
Psp6I	CCWGG	2 cut(s)	401, 1546
PspFI	CCCAGC	1 cut(s)	1324
PspGI	CCWGG	2 cut(s)	401, 1546
PspN4I	GGNNCC	7 cut(s)	135, 354, 400, 712, 1838, 2237, 2302
PspPI	GGNCC	4 cut(s)	134, 279, 1541, 2235
PspXI	VCTCGAGB	1 cut(s)	30
PstI	CTGCAG	3 cut(s)	460, 1933, 2137
PstNI	CAGNNNCTG	2 cut(s)	562, 1310
PsuI	RGATCY	6 cut(s)	398, 641, 958, 1024, 1489, 1836
PvuII	CAGCTG	4 cut(s)	528, 995, 2063, 2294
RsaI	GTAC	3 cut(s)	89, 250, 566
RsaNI	GTAC	3 cut(s)	88, 249, 565
RseI	CAYNNNNRTG	2 cut(s)	1712, 1806
Sau96I	GGNCC	4 cut(s)	134, 279, 1541, 2235
SchI	GAGTC	6 cut(s)	22, 121, 818, 826, 1792, 1951
ScrFI	CCNGG	3 cut(s)	94, 403, 1548
SduI	GDGCHC	2 cut(s)	1432, 2057
SexAI	ACCWGGT	1 cut(s)	1546
SfaNI	GCATC	4 cut(s)	272, 1297, 1694, 2146
SfcI	CTRYAG	4 cut(s)	456, 739, 1929, 2133
Sfr274I	CTCGAG	1 cut(s)	30
SinI	GGWCC	2 cut(s)	279, 1541
SlaI	CTCGAG	1 cut(s)	30
SmiMI	CAYNNNNRTG	2 cut(s)	1712, 1806
SmlI	CTYRAG	2 cut(s)	30, 2042
SmoI	CTYRAG	2 cut(s)	30, 2042
SphI	GCATGC	1 cut(s)	1735
SseBI	AGGCCT	1 cut(s)	1506
SsiI	CCGC	6 cut(s)	50, 384, 765, 1480, 1834, 2279
SspI	AATATT	1 cut(s)	1911
SspMI	CTAG	9 cut(s)	299, 410, 639, 839, 929, 1584, 1599, 1991, 2283
StuI	AGGCCT	1 cut(s)	1506
StyD4I	CCNGG	3 cut(s)	92, 401, 1546
StyI	CCWWGG	3 cut(s)	165, 706, 1152
TaaI	ACNGT	4 cut(s)	20, 558, 920, 1243
TaiI	ACGT	1 cut(s)	750
TaqI	TCGA	4 cut(s)	31, 624, 915, 2354
TatI	WGTACW	2 cut(s)	87, 564
TauI	GCSGC	2 cut(s)	53, 2282
TfiI	GAWTC	7 cut(s)	97, 232, 859, 1186, 1286, 1448, 2269
TscAI	CASTG	4 cut(s)	25, 1216, 1482, 2330
TseFI	GTSAC	2 cut(s)	810, 965
Tsp45I	GTSAC	2 cut(s)	810, 965
TspGWI	ACGGA	1 cut(s)	1918
TspRI	CASTG	4 cut(s)	25, 1216, 1482, 2330
Van91I	CCANNNNNTGG	1 cut(s)	889
Vha464I	CTTAAG	1 cut(s)	2042
VneI	GTGCAC	1 cut(s)	2053
VpaK11BI	GGWCC	2 cut(s)	279, 1541
XagI	CCTNNNNNAGG	2 cut(s)	566, 1521
XapI	RAATTY	4 cut(s)	1145, 1358, 1790, 2047
XbaI	TCTAGA	1 cut(s)	638
XceI	RCATGY	1 cut(s)	1735
XhoI	CTCGAG	1 cut(s)	30
XmiI	GTMKAC	1 cut(s)	1622
XmnI	GAANNNNTTC	3 cut(s)	448, 493, 1452
XspI	CTAG	9 cut(s)	299, 410, 639, 839, 929, 1584, 1599, 1991, 2283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.