Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007626

Physical Location & Seq

Genomic Coordinates Reverse (-)

22894316 .. 22900361

Gene Structure 6046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1095300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGGAGCAGAAAGGCATTCTGCTGTCGGCTTTGGGGGTGGGGGTGGGAGTGGGAGTCGGTCTTGGGCTTGCTTCCGGCCAGACGATGAGCAAATGGACCGGAAACGACACGATGTCGAACGGCGTTACGCCAGATAGGGTGGAGCAGGAGTTGCTGCGACAGATCGTTGATGGAAGAGACAGCAAGGTCACATTCGACCAGTTCCCCTACTACCTCAGTGAACAGACGAGAGTTTTGATAACGAGTGCTGCTTATGTCCATCTTAAGCGAGCTGAGGTTTCGAAGTACACACGCAATCTCTCTCCTGCAAGTCGGGCTATTTTGCTCTCAGGACCTGCCGAACTTTACCAACAGCAGCTTGCCAAGGCTTTAGCCCATTACTTCCAAGCCAAGTTACTGCTCTTGGACGTAACAGATTTTTCTCTAAAGGTGCAGAGCAAATACGGCAATACCAACAAAGCATCTTCCTTTAAAAGATCCACTTCAGAGGTGACACTAGAGCGGTTGTCTGGGCTGTTTGGATCATTTTCGCTCTTTCCACAAAGGGAGGAACCACCTAAAGGTAATTTACAAAGGCAAAGCAGTGGTGTGGATCTCGGATCAAGTGGGCTAGAAGGTTCTTGTAAGCCTTGCACGCTTCGTAGGAATGCTTCAGCTTCAGCTAATATCAGTAACCTTGCTTCTCAGAGCACTCCTGCAATTTCAGGTGAGTTTAAGCGCACAAGCAGCTGGTCTTTTGATGAGAAGCTTCTTATACAGTCCCTGTACAGGGTTTTGGTTTTTGTCTCGAGTACTAGTCCCATTGTGCTGTATCTTAGGGACGTTGACAAGCTCTTATCTAGATCGCAAAGGATATACAACTTGTTCCAGAAAATGTTGAAGAAATTATCTGGAGCCGTGTTGATCCTTGGTTCACGTGTTGTGGATCTCGGTAGTGACAACAGAGAGGTCGAGGAGAGGCTTACTGCTCTTTTCCCTTACAACATTGAGATCAGGCCTCCCGAAAATGAATCCCATCTTGTCAGCTGGAAGACTCAACTGGAGGAGGATATGAGAATGATTCAGGTGCAGGATAACAAAAACCACATCATGGAAGTTCTTTCGGCTAATGACCTTGATTGTGATGACCTTGGTTCAATCTGCATCGCAGACACAATCGACCTCAGTAACTATATAGAAGAGATTGTTGTATCAGCAGTTTCTCATCATTTAATGAATAACAAAGATCCTGAATACAGAAATGGGAAACTCGTCATTTCCTCCAAGAGTTTGTCCCATGGATTAAACATATTCCAAGAGGGAAAATCCAGTGGGAAAGATACAATGAAGCTAGTAGCGAAGGCTGAAGTGCCTAAGGAAGGAGGAAATGAAGTGTCTGTTGGTGTAACAACAGAAACAATAACCGAAAGCACTGCTCCTGCTGCAGAGACAGCAGCTGCAGCAGCAAAACCGGATGCTGACAATTCAATTCCAGTATCAAGAGCTTCTGCAGAACTTGATAATGAATTTGAGAAACGCATAAGACCAGAGGTCATACCAGCTAACGAGATCAGTGTAACATTTGCTGATATTGGTGCCTTGGATGAGATTAAAGAATCCCTTCAGGAATTGGTAATGCTCCCACTGCGAAGACCAGACCTTTTCAACGGGGGCCTACTAAAGCCTTGTAGAGGTATACTGTTATTTGGCCCCCCCGGAAGTGGGAAGACCATGCTGGCAAAGGCCATAGCTGGAGAGGCTGGAGCAAGCTTCATTAATGTATCCATGTCTACCATTACCTCTAAATGGTTTGGTGAAGATGAGAAAAATGTCCGAGCGTTGTTCACCCTCGCAGCCAAAGTCTCTCCAACCATCATCTTTGTGGACGAGGTTGATAGCATGCTCGGGCAGCGAACAAGAGTTGGTGAGCATGAAGCTATGCGGAAAATAAAAAATGAATTCATGACTCACTGGGATGGGCTCTTGAGTAATCAAGGAGACCGAATCCTTGTTCTTGCTGCAACCAACAGACCATTTGACCTTGATGAAGCAATCATCAGGCGTTTTGAACGAAGAATTTTGGTGGGGCTACCGACTGTGGAGAACAGAGAGATGATTTTGAGAACCTTGTTGTCGAAAGAGAAGGTGGAAGCACGACTAGATTTCAAGGAGGTTGCAACCATGACTGAAGGATTTAGTGGAAGTGATCTTAGGAACTTATGCACAACAGCTGCCTATCGACCAGTTAGGGAATTAATACAGGCGGAGAGAAAGAAGGATCTGGAGAAAAAGAAGACAGCTGCACAAGATGGTGCGGGAGAACGGAATCCAGAAGCTGCCCCAGTAACAAAAGTAGAACATAAAGAAGAAAGAGTGATCACCCTCAGGCCTCTAAACATGGAAGACTTCAAGCAGGCGAAGAACCAGGTTGCAGCTAGCTTTGCAGCTGAGGGAGCCATGATGAATGAATTGAAGCAGTGGAATGATCTATACGGGGAAGGGGGGTCACGAAAGAGAGAACAATTGAGTTACTTCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017076 GO:0017111 GO:0019867 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033365 GO:0034613 GO:0035639 GO:0036094 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045041 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

840

Amino Acids

92.73

Weight (kDa)

6.33

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	372 - 432	2.8e-35	Domain of unknown function (DUF7751)
AAA	PF00004	559 - 689	1.1e-38	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	713 - 756	1.9e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64110 AT1G64110 AT1G64110 AT1G64110 AT1G64110
fragaria_vesca	FvH4_5g03560 FvH4_5g03560 FvH4_5g03560 FvH4_5g03560
malus_domestica	MD06G1095300.v1.1 MD14G1115400.v1.1
prunus_persica	Prupe.5G110200_v2.0.a1
pyrus_communis	pycom06g09190
rosa_chinensis	RchiOBHm_Chr7g0196151
rosa_laevigata	RLG00000004060
rosa_roxburghii	Rroxscaffold_3G00259730
rosa_rugosa	Rorug07G0030900 Rorug07G0030900 Rorug07G0030900
rosa_samantha	Rh7AG156900 Rh7BG158600 Rh7CG162400 Rh7DG157800
rosa_wichuraiana	Rw7G013400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	185
Acc36I	ACCTGC	1 cut(s)	343
AccB1I	GGYRCC	1 cut(s)	1574
AccB7I	CCANNNNNTGG	1 cut(s)	1090
AccBSI	CCGCTC	1 cut(s)	502
AccI	GTMKAC	2 cut(s)	1675, 1769
AciI	CCGC	4 cut(s)	502, 1921, 2243, 2294
AclWI	GGATC	8 cut(s)	471, 529, 600, 607, 898, 933, 1220, 2265
AcoI	YGGCCR	1 cut(s)	76
AcsI	RAATTY	3 cut(s)	1505, 1937, 2055
AcuI	CTGAAG	6 cut(s)	468, 636, 642, 1365, 1586, 2187
AcvI	CACGTG	1 cut(s)	917
AfaI	GTAC	3 cut(s)	287, 767, 793
AfiI	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1670, 1700, 1701, 1785
AflII	CTTAAG	1 cut(s)	263
AflIII	ACRYGT	1 cut(s)	916
AgsI	TTSAA	8 cut(s)	880, 1137, 1467, 1645, 2048, 2146, 2389, 2452
AhdI	GACNNNNNGTC	2 cut(s)	112, 1529
AhlI	ACTAGT	1 cut(s)	794
AjnI	CCWGG	1 cut(s)	2403
AjuI	GAANNNNNNNTTGG	2 cut(s)	1362, 1394
Alw21I	GWGCWC	1 cut(s)	692
Alw26I	GTCTC	5 cut(s)	171, 790, 1421, 1846, 1971
AlwI	GGATC	8 cut(s)	471, 529, 600, 607, 898, 933, 1220, 2265
AlwNI	CAGNNNCTG	4 cut(s)	335, 763, 1436, 2315
Ama87I	CYCGRG	2 cut(s)	787, 1883
AoxI	GGCC	6 cut(s)	76, 995, 1651, 1687, 1722, 2366
ApoI	RAATTY	3 cut(s)	1505, 1937, 2055
ArsI	GACNNNNNNTTYG	2 cut(s)	217, 249
AseI	ATTAAT	2 cut(s)	1755, 2234
Asp700I	GAANNNNTTC	1 cut(s)	1599
AspLEI	GCGC	1 cut(s)	720
AspS9I	GGNCC	4 cut(s)	96, 332, 1651, 1688
AsuC2I	CCSGG	1 cut(s)	1695
AsuHPI	GGTGA	6 cut(s)	502, 719, 1805, 1816, 1916, 2350
AsuII	TTCGAA	1 cut(s)	281
AsuNHI	GCTAGC	1 cut(s)	2414
AvaI	CYCGRG	2 cut(s)	787, 1883
AvaII	GGWCC	2 cut(s)	96, 332
AxyI	CCTNAGG	2 cut(s)	1353, 2363
BanI	GGYRCC	1 cut(s)	1574
BanII	GRGCYC	1 cut(s)	1962
BarI	GAAGNNNNNNTAC	4 cut(s)	634, 664, 666, 696
BbrPI	CACGTG	1 cut(s)	917
BbsI	GAAGAC	5 cut(s)	1037, 1636, 1712, 2279, 2388
Bbv12I	GWGCWC	1 cut(s)	692
BbvCI	CCTCAGC	2 cut(s)	273, 2427
BccI	CCATC	6 cut(s)	164, 267, 1023, 1859, 1949, 2282
BceAI	ACGGC	3 cut(s)	136, 460, 881
BcgI	CGANNNNNNTGC	2 cut(s)	1394, 1428
BciT130I	CCWGG	1 cut(s)	2405
BciVI	GTATCC	1 cut(s)	1771
BclI	TGATCA	1 cut(s)	2355
BcnI	CCSGG	1 cut(s)	1695
BcoDI	GTCTC	5 cut(s)	171, 790, 1421, 1846, 1971
BcuI	ACTAGT	1 cut(s)	794
BfaI	CTAG	7 cut(s)	497, 611, 795, 840, 1331, 2138, 2415
BfmI	CTRYAG	3 cut(s)	1422, 1437, 1488
BfrI	CTTAAG	1 cut(s)	263
BfuAI	ACCTGC	1 cut(s)	343
BfuI	GTATCC	1 cut(s)	1771
BmcAI	AGTACT	1 cut(s)	793
Bme1390I	CCNGG	2 cut(s)	1695, 2405
Bme18I	GGWCC	2 cut(s)	96, 332
BmeRI	GACNNNNNGTC	2 cut(s)	112, 1529
BmeT110I	CYCGRG	2 cut(s)	787, 1883
BmgT120I	GGNCC	4 cut(s)	96, 332, 1651, 1688
BmiI	GGNNCC	6 cut(s)	552, 895, 1576, 1652, 1690, 2434
BmrFI	CCNGG	2 cut(s)	1695, 2405
BmrI	ACTGGG	2 cut(s)	1960, 2315
BmsI	GCATC	3 cut(s)	470, 1152, 1444
BmtI	GCTAGC	1 cut(s)	2418
BmuI	ACTGGG	2 cut(s)	1960, 2315
BpiI	GAAGAC	5 cut(s)	1037, 1636, 1712, 2279, 2388
BpmI	CTGGAG	5 cut(s)	912, 1061, 1752, 1761, 2282
Bpu10I	CCTNAGC	2 cut(s)	273, 2427
Bpu14I	TTCGAA	1 cut(s)	281
BpuEI	CTTGAG	1 cut(s)	1984
BpuMI	CCSGG	1 cut(s)	1695
BsaAI	YACGTR	1 cut(s)	917
BsaI	GGTCTC	1 cut(s)	1971
BsaJI	CCNNGG	6 cut(s)	363, 907, 1129, 1276, 1578, 1693
BsaWI	WCCGGW	2 cut(s)	98, 1450
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 134, 164
Bsc4I	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1670, 1700, 1701, 1785
Bse1I	ACTGG	7 cut(s)	199, 1044, 1308, 1472, 1955, 2222, 2321
Bse21I	CCTNAGG	2 cut(s)	1353, 2363
BseBI	CCWGG	1 cut(s)	2405
BseDI	CCNNGG	6 cut(s)	363, 907, 1129, 1276, 1578, 1693
BseGI	GGATG	3 cut(s)	1459, 1588, 1960
BseLI	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1670, 1700, 1701, 1785
BseMII	CTCAG	7 cut(s)	229, 264, 342, 698, 1177, 2377, 2418
BseNI	ACTGG	7 cut(s)	199, 1044, 1308, 1472, 1955, 2222, 2321
BseRI	GAGGAG	2 cut(s)	968, 1058
BsgI	GTGCAG	3 cut(s)	452, 1088, 2265
BshFI	GGCC	6 cut(s)	78, 997, 1653, 1689, 1724, 2368
BshNI	GGYRCC	1 cut(s)	1574
BsiHKAI	GWGCWC	1 cut(s)	692
BsiHKCI	CYCGRG	2 cut(s)	787, 1883
BsiSI	CCGG	4 cut(s)	75, 99, 1451, 1695
BslFI	GGGAC	4 cut(s)	745, 783, 833, 1258
BslI	CCNNNNNNNGG	9 cut(s)	560, 768, 769, 1090, 1358, 1670, 1700, 1701, 1785
BsmAI	GTCTC	5 cut(s)	171, 790, 1421, 1846, 1971
BsmFI	GGGAC	4 cut(s)	745, 783, 833, 1258
BsmI	GAATGC	2 cut(s)	15, 652
BsnI	GGCC	6 cut(s)	78, 997, 1653, 1689, 1724, 2368
Bso31I	GGTCTC	1 cut(s)	1971
BsoBI	CYCGRG	2 cut(s)	787, 1883
Bsp119I	TTCGAA	1 cut(s)	281
Bsp1286I	GDGCHC	2 cut(s)	692, 1962
Bsp1407I	TGTACA	1 cut(s)	765
Bsp19I	CCATGG	1 cut(s)	1276
BspACI	CCGC	4 cut(s)	502, 1921, 2243, 2294
BspANI	GGCC	6 cut(s)	78, 997, 1653, 1689, 1724, 2368
BspCNI	CTCAG	7 cut(s)	228, 265, 341, 697, 1176, 2376, 2419
BspHI	TCATGA	1 cut(s)	1941
BspLI	GGNNCC	6 cut(s)	552, 895, 1576, 1652, 1690, 2434
BspMAI	CTGCAG	3 cut(s)	1426, 1441, 1492
BspMI	ACCTGC	1 cut(s)	343
BspOI	GCTAGC	1 cut(s)	2418
BspPI	GGATC	8 cut(s)	471, 529, 600, 607, 898, 933, 1220, 2265
BspT104I	TTCGAA	1 cut(s)	281
BspT107I	GGYRCC	1 cut(s)	1574
BspTI	CTTAAG	1 cut(s)	263
BspTNI	GGTCTC	1 cut(s)	1971
BsrBI	CCGCTC	1 cut(s)	502
BsrGI	TGTACA	1 cut(s)	765
BsrI	ACTGG	7 cut(s)	199, 1044, 1308, 1472, 1955, 2222, 2321
BssECI	CCNNGG	6 cut(s)	363, 907, 1129, 1276, 1578, 1693
BssNAI	GTATAC	1 cut(s)	1676
BssT1I	CCWWGG	5 cut(s)	363, 907, 1129, 1276, 1578
Bst1107I	GTATAC	1 cut(s)	1676
Bst2UI	CCWGG	1 cut(s)	2405
Bst4CI	ACNGT	3 cut(s)	759, 1680, 2077
Bst6I	CTCTTC	2 cut(s)	169, 1173
BstAFI	CTTAAG	1 cut(s)	263
BstAPI	GCANNNNNTGC	1 cut(s)	151
BstAUI	TGTACA	1 cut(s)	765
BstBAI	YACGTR	1 cut(s)	917
BstBI	TTCGAA	1 cut(s)	281
BstC8I	GCNNGC	9 cut(s)	69, 270, 360, 635, 1716, 1747, 1880, 2394, 2416
BstDSI	CCRYGG	1 cut(s)	1276
BstENI	CCTNNNNNAGG	2 cut(s)	1356, 1668
BstF5I	GGATG	3 cut(s)	1459, 1588, 1960
BstHHI	GCGC	1 cut(s)	720
BstMAI	GTCTC	5 cut(s)	171, 790, 1421, 1846, 1971
BstNI	CCWGG	1 cut(s)	2405
BstNSI	RCATGY	1 cut(s)	1882
BstSCI	CCNGG	2 cut(s)	1693, 2403
BstSFI	CTRYAG	3 cut(s)	1422, 1437, 1488
BstV2I	GAAGAC	5 cut(s)	1037, 1636, 1712, 2279, 2388
BstX2I	RGATCY	5 cut(s)	476, 592, 925, 1225, 2257
BstYI	RGATCY	5 cut(s)	476, 592, 925, 1225, 2257
BstZ17I	GTATAC	1 cut(s)	1676
Bsu36I	CCTNAGG	2 cut(s)	1353, 2363
BsuI	GTATCC	1 cut(s)	1771
BsuRI	GGCC	6 cut(s)	78, 997, 1653, 1689, 1724, 2368
BtgI	CCRYGG	1 cut(s)	1276
BtgZI	GCGATG	1 cut(s)	1129
BtsCI	GGATG	3 cut(s)	1459, 1588, 1960
BtsI	GCAGTG	4 cut(s)	589, 1410, 1622, 2462
BtsIMutI	CAGTG	8 cut(s)	223, 589, 1315, 1410, 1558, 1622, 1948, 2462
BveI	ACCTGC	1 cut(s)	343
Cac8I	GCNNGC	9 cut(s)	69, 270, 360, 635, 1716, 1747, 1880, 2394, 2416
CaiI	CAGNNNCTG	4 cut(s)	335, 763, 1436, 2315
CciI	TCATGA	1 cut(s)	1941
CfoI	GCGC	1 cut(s)	720
Cfr13I	GGNCC	4 cut(s)	96, 332, 1651, 1688
CsiI	ACCWGGT	1 cut(s)	2403
Csp6I	GTAC	3 cut(s)	286, 766, 792
CviQI	GTAC	3 cut(s)	286, 766, 792
DraI	TTTAAA	1 cut(s)	472
DrdI	GACNNNNNNGTC	1 cut(s)	185
DriI	GACNNNNNGTC	2 cut(s)	112, 1529
DseDI	GACNNNNNNGTC	1 cut(s)	185
EaeI	YGGCCR	1 cut(s)	76
Eam1104I	CTCTTC	2 cut(s)	169, 1173
Eam1105I	GACNNNNNGTC	2 cut(s)	112, 1529
EarI	CTCTTC	2 cut(s)	169, 1173
EciI	GGCGGA	1 cut(s)	2258
Eco130I	CCWWGG	5 cut(s)	363, 907, 1129, 1276, 1578
Eco147I	AGGCCT	2 cut(s)	997, 2368
Eco24I	GRGCYC	1 cut(s)	1962
Eco31I	GGTCTC	1 cut(s)	1971
Eco47I	GGWCC	2 cut(s)	96, 332
Eco57I	CTGAAG	6 cut(s)	468, 636, 642, 1365, 1586, 2187
Eco72I	CACGTG	1 cut(s)	917
Eco81I	CCTNAGG	2 cut(s)	1353, 2363
Eco88I	CYCGRG	2 cut(s)	787, 1883
EcoNI	CCTNNNNNAGG	2 cut(s)	1356, 1668
EcoO109I	RGGNCCY	2 cut(s)	332, 1651
EcoRI	GAATTC	1 cut(s)	1937
EcoRII	CCWGG	1 cut(s)	2403
EcoT14I	CCWWGG	5 cut(s)	363, 907, 1129, 1276, 1578
EcoT38I	GRGCYC	1 cut(s)	1962
ErhI	CCWWGG	5 cut(s)	363, 907, 1129, 1276, 1578
FalI	AAGNNNNNCTT	4 cut(s)	466, 498, 1584, 1616
FaqI	GGGAC	4 cut(s)	745, 783, 833, 1258
FauI	CCCGC	1 cut(s)	2287
FbaI	TGATCA	1 cut(s)	2355
FblI	GTMKAC	2 cut(s)	1675, 1769
FokI	GGATG	3 cut(s)	1466, 1595, 1967
FriOI	GRGCYC	1 cut(s)	1962
FspBI	CTAG	7 cut(s)	497, 611, 795, 840, 1331, 2138, 2415
GlaI	GCGC	1 cut(s)	719
GsuI	CTGGAG	5 cut(s)	912, 1061, 1752, 1761, 2282
HaeIII	GGCC	6 cut(s)	78, 997, 1653, 1689, 1724, 2368
HapII	CCGG	4 cut(s)	75, 99, 1451, 1695
HhaI	GCGC	1 cut(s)	720
Hin6I	GCGC	1 cut(s)	718
HinP1I	GCGC	1 cut(s)	718
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HindIII	AAGCTT	2 cut(s)	746, 1747
HinfI	GANTC	8 cut(s)	54, 1010, 1033, 1060, 1595, 1945, 1983, 2305
HpaII	CCGG	4 cut(s)	75, 99, 1451, 1695
HphI	GGTGA	6 cut(s)	502, 719, 1805, 1816, 1916, 2350
Hpy166II	GTNNAC	8 cut(s)	221, 288, 826, 914, 1676, 1770, 1824, 1864
Hpy188I	TCNGA	4 cut(s)	487, 599, 687, 1814
Hpy8I	GTNNAC	8 cut(s)	221, 288, 826, 914, 1676, 1770, 1824, 1864
HpyAV	CCTTC	8 cut(s)	608, 1333, 1352, 1610, 2116, 2162, 2248, 2471
HpyCH4III	ACNGT	3 cut(s)	759, 1680, 2077
HpyCH4IV	ACGT	3 cut(s)	408, 822, 916
HpySE526I	ACGT	3 cut(s)	408, 822, 916
HspAI	GCGC	1 cut(s)	718
Ksp22I	TGATCA	1 cut(s)	2355
LmnI	GCTCC	7 cut(s)	4, 142, 893, 1420, 1623, 1742, 2432
LweI	GCATC	3 cut(s)	470, 1152, 1444
MabI	ACCWGGT	1 cut(s)	2403
MaeI	CTAG	7 cut(s)	497, 611, 795, 840, 1331, 2138, 2415
MaeII	ACGT	3 cut(s)	408, 822, 916
MbiI	CCGCTC	1 cut(s)	502
MfeI	CAATTG	1 cut(s)	2501
MflI	RGATCY	5 cut(s)	476, 592, 925, 1225, 2257
MhlI	GDGCHC	2 cut(s)	692, 1962
MlyI	GAGTC	3 cut(s)	63, 1027, 1939
MmeI	TCCRAC	1 cut(s)	1871
MroXI	GAANNNNTTC	1 cut(s)	1599
MseI	TTAA	8 cut(s)	264, 471, 714, 1211, 1283, 1590, 1755, 2234
MslI	CAYNNNNRTG	2 cut(s)	1859, 1953
MspA1I	CMGCKG	6 cut(s)	729, 1026, 1436, 2210, 2279, 2426
MspCI	CTTAAG	1 cut(s)	263
MspI	CCGG	4 cut(s)	75, 99, 1451, 1695
MspR9I	CCNGG	2 cut(s)	1695, 2405
MunI	CAATTG	1 cut(s)	2501
Mva1269I	GAATGC	2 cut(s)	15, 652
MvaI	CCWGG	1 cut(s)	2405
NciI	CCSGG	1 cut(s)	1695
NcoI	CCATGG	1 cut(s)	1276
NheI	GCTAGC	1 cut(s)	2414
NlaIV	GGNNCC	6 cut(s)	552, 895, 1576, 1652, 1690, 2434
NmuCI	GTSAC	4 cut(s)	187, 490, 935, 2484
NspI	RCATGY	1 cut(s)	1882
NspV	TTCGAA	1 cut(s)	281
PaeI	GCATGC	1 cut(s)	1882
PaeR7I	CTCGAG	1 cut(s)	787
PagI	TCATGA	1 cut(s)	1941
PceI	AGGCCT	2 cut(s)	997, 2368
PctI	GAATGC	2 cut(s)	15, 652
PdmI	GAANNNNTTC	1 cut(s)	1599
PfeI	GAWTC	5 cut(s)	1010, 1060, 1595, 1983, 2305
PflMI	CCANNNNNTGG	1 cut(s)	1090
PleI	GAGTC	3 cut(s)	62, 1027, 1939
PmaCI	CACGTG	1 cut(s)	917
PmlI	CACGTG	1 cut(s)	917
PpsI	GAGTC	3 cut(s)	62, 1027, 1939
Ppu21I	YACGTR	1 cut(s)	917
PpuMI	RGGWCCY	1 cut(s)	332
PshBI	ATTAAT	2 cut(s)	1755, 2234
Psp5II	RGGWCCY	1 cut(s)	332
Psp6I	CCWGG	1 cut(s)	2403
PspCI	CACGTG	1 cut(s)	917
PspGI	CCWGG	1 cut(s)	2403
PspN4I	GGNNCC	6 cut(s)	552, 895, 1576, 1652, 1690, 2434
PspPI	GGNCC	4 cut(s)	96, 332, 1651, 1688
PspPPI	RGGWCCY	1 cut(s)	332
PstI	CTGCAG	3 cut(s)	1426, 1441, 1492
PstNI	CAGNNNCTG	4 cut(s)	335, 763, 1436, 2315
PsuI	RGATCY	5 cut(s)	476, 592, 925, 1225, 2257
PvuII	CAGCTG	6 cut(s)	729, 1026, 1436, 2210, 2279, 2426
RsaI	GTAC	3 cut(s)	287, 767, 793
RsaNI	GTAC	3 cut(s)	286, 766, 792
RseI	CAYNNNNRTG	2 cut(s)	1859, 1953
SaqAI	TTAA	8 cut(s)	264, 471, 714, 1211, 1283, 1590, 1755, 2234
Sau96I	GGNCC	4 cut(s)	96, 332, 1651, 1688
ScaI	AGTACT	1 cut(s)	793
SchI	GAGTC	3 cut(s)	63, 1027, 1939
ScrFI	CCNGG	2 cut(s)	1695, 2405
SduI	GDGCHC	2 cut(s)	692, 1962
SexAI	ACCWGGT	1 cut(s)	2403
SfaNI	GCATC	3 cut(s)	470, 1152, 1444
SfcI	CTRYAG	3 cut(s)	1422, 1437, 1488
Sfr274I	CTCGAG	1 cut(s)	787
SfuI	TTCGAA	1 cut(s)	281
SinI	GGWCC	2 cut(s)	96, 332
SlaI	CTCGAG	1 cut(s)	787
SmiMI	CAYNNNNRTG	2 cut(s)	1859, 1953
SmlI	CTYRAG	3 cut(s)	263, 787, 1963
SmoI	CTYRAG	3 cut(s)	263, 787, 1963
SpeI	ACTAGT	1 cut(s)	794
SphI	GCATGC	1 cut(s)	1882
SseBI	AGGCCT	2 cut(s)	997, 2368
SsiI	CCGC	4 cut(s)	502, 1921, 2243, 2294
SspMI	CTAG	7 cut(s)	497, 611, 795, 840, 1331, 2138, 2415
StuI	AGGCCT	2 cut(s)	997, 2368
StyD4I	CCNGG	2 cut(s)	1693, 2403
StyI	CCWWGG	5 cut(s)	363, 907, 1129, 1276, 1578
TaaI	ACNGT	3 cut(s)	759, 1680, 2077
TaiI	ACGT	3 cut(s)	411, 825, 919
TaqI	TCGA	8 cut(s)	116, 195, 281, 788, 951, 1158, 2114, 2218
TaqII	GACCGA	2 cut(s)	47, 1995
TatI	WGTACW	3 cut(s)	285, 765, 791
TfiI	GAWTC	5 cut(s)	1010, 1060, 1595, 1983, 2305
Tru1I	TTAA	8 cut(s)	264, 471, 714, 1211, 1283, 1590, 1755, 2234
Tru9I	TTAA	8 cut(s)	264, 471, 714, 1211, 1283, 1590, 1755, 2234
TscAI	CASTG	8 cut(s)	223, 589, 1315, 1417, 1558, 1629, 1955, 2462
TseFI	GTSAC	4 cut(s)	187, 490, 935, 2484
Tsp45I	GTSAC	4 cut(s)	187, 490, 935, 2484
TspGWI	ACGGA	1 cut(s)	2317
TspRI	CASTG	8 cut(s)	223, 589, 1315, 1417, 1558, 1629, 1955, 2462
Van91I	CCANNNNNTGG	1 cut(s)	1090
Vha464I	CTTAAG	1 cut(s)	263
VpaK11BI	GGWCC	2 cut(s)	96, 332
VspI	ATTAAT	2 cut(s)	1755, 2234
XagI	CCTNNNNNAGG	2 cut(s)	1356, 1668
XapI	RAATTY	3 cut(s)	1505, 1937, 2055
XbaI	TCTAGA	1 cut(s)	839
XceI	RCATGY	1 cut(s)	1882
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1858
XhoI	CTCGAG	1 cut(s)	787
XmiI	GTMKAC	2 cut(s)	1675, 1769
XmnI	GAANNNNTTC	1 cut(s)	1599
XspI	CTAG	7 cut(s)	497, 611, 795, 840, 1331, 2138, 2415
ZrmI	AGTACT	1 cut(s)	793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.