AT1G66080

Protein of unknown function (DUF775)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
24599939 .. 24601308
1370 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G66080.1

Sequence Viewer

Length: 573 bp
ATGTTCGGAGTCGTCTTCCCCAATCGAAGTTTCCCAATAGACATCTCAACCTTCACTCAAATCGACACATTCCACTGGGTTCTCGACATGAACCACTTCGTCGGTGAAGCTTATGATCAAATCTCAGAGATGTGTATCTTCTTGTTAAACAATTTCAATCTTCCACCAGATAAAGCTTTAGCTGTTTATGTTCAATCTCCAGGATCAGCTTTTGTGTTCTGTGGTGCTGTAACTTTAGCTAGACCTTCTGCTGTTTTATCACTTCAATGGCCTGAACCTGGTAGTGCAGCGAAGATGCAACTCACGGCGGGTGATTCGAGTTCCTTATCGGCGAAGATCGGTGTTTCGGTGGAGGATGTAGCAGCGTTGAGGTCGTTGGATGTTGTTGCGGAGAGGAGGATTGAGAAATTGGCTATGAAAGTTGGAGAGAATTTGTTTAACTTTATGCAGTCTTTTTGTGGTGTTGATGGAAGTAAATTGGTTGTTCCTATGGATATTTTGGATCGTTGGTTTAAGAAGTTTCAGGAGAAAGCTAAACGTGATCCTGATTTCCTCAAAAGCTTTGCTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

190

Amino Acids

21.1

Weight (kDa)

5.38

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hikeshi-like_N PF05603 18 - 123 7.5e-12 Hikeshi-like, N-terminal domain
Hikeshi-like_C PF21057 134 - 186 1.8e-13 Hikeshi-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 308, 389
AclWI GGATC 3 cut(s) 211, 510, 536
AcsI RAATTY 1 cut(s) 430
AfiI CCNNNNNNNGG 1 cut(s) 278
AgsI TTSAA 3 cut(s) 157, 194, 266
AjnI CCWGG 2 cut(s) 199, 277
AjuI GAANNNNNNNTTGG 2 cut(s) 14, 46
AluBI AGCT 7 cut(s) 110, 176, 182, 209, 239, 533, 561
AluI AGCT 7 cut(s) 110, 176, 182, 209, 239, 533, 561
AlwI GGATC 3 cut(s) 211, 510, 536
AoxI GGCC 1 cut(s) 269
ApeKI GCWGC 2 cut(s) 287, 362
ApoI RAATTY 1 cut(s) 430
Asp700I GAANNNNTTC 1 cut(s) 95
AsuHPI GGTGA 2 cut(s) 116, 323
BbsI GAAGAC 1 cut(s) 7
BbvI GCAGC 2 cut(s) 299, 374
BccI CCATC 1 cut(s) 461
BceAI ACGGC 1 cut(s) 321
BciT130I CCWGG 2 cut(s) 201, 279
BclI TGATCA 1 cut(s) 115
BfaI CTAG 1 cut(s) 240
BisI GCNGC 2 cut(s) 288, 363
BlsI GCNGC 2 cut(s) 289, 364
Bme1390I CCNGG 2 cut(s) 201, 279
BmrFI CCNGG 2 cut(s) 201, 279
BmrI ACTGGG 1 cut(s) 85
BmsI GCATC 1 cut(s) 285
BmuI ACTGGG 1 cut(s) 85
BpiI GAAGAC 1 cut(s) 7
BpmI CTGGAG 1 cut(s) 183
BsaBI GATNNNNATC 1 cut(s) 134
Bsc4I CCNNNNNNNGG 1 cut(s) 278
Bse1I ACTGG 1 cut(s) 80
Bse8I GATNNNNATC 1 cut(s) 134
BseBI CCWGG 2 cut(s) 201, 279
BseGI GGATG 2 cut(s) 361, 385
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 1 cut(s) 278
BseMII CTCAG 1 cut(s) 138
BseNI ACTGG 1 cut(s) 80
BseRI GAGGAG 1 cut(s) 409
BseXI GCAGC 2 cut(s) 299, 374
BsgI GTGCAG 1 cut(s) 306
BshFI GGCC 1 cut(s) 271
BslI CCNNNNNNNGG 1 cut(s) 278
BsnI GGCC 1 cut(s) 271
Bsp143I GATC 5 cut(s) 115, 203, 336, 502, 541
BspACI CCGC 2 cut(s) 308, 389
BspANI GGCC 1 cut(s) 271
BspCNI CTCAG 1 cut(s) 137
BspPI GGATC 3 cut(s) 211, 510, 536
BsrI ACTGG 1 cut(s) 80
BssMI GATC 5 cut(s) 115, 203, 336, 502, 541
Bst2UI CCWGG 2 cut(s) 201, 279
BstDEI CTNAG 1 cut(s) 124
BstF5I GGATG 2 cut(s) 361, 385
BstKTI GATC 5 cut(s) 118, 206, 339, 505, 544
BstMBI GATC 5 cut(s) 115, 203, 336, 502, 541
BstNI CCWGG 2 cut(s) 201, 279
BstSCI CCNGG 2 cut(s) 199, 277
BstV1I GCAGC 2 cut(s) 299, 374
BstV2I GAAGAC 1 cut(s) 7
BsuRI GGCC 1 cut(s) 271
BtsCI GGATG 2 cut(s) 361, 385
BtsIMutI CAGTG 1 cut(s) 73
CsiI ACCWGGT 1 cut(s) 277
CviAII CATG 1 cut(s) 88
CviJI RGCY 9 cut(s) 110, 176, 182, 209, 239, 271, 413, 533, 561
CviKI_1 RGCY 9 cut(s) 110, 176, 182, 209, 239, 271, 413, 533, 561
DdeI CTNAG 1 cut(s) 124
DpnI GATC 5 cut(s) 117, 205, 338, 504, 543
DpnII GATC 5 cut(s) 115, 203, 336, 502, 541
EcoRII CCWGG 2 cut(s) 199, 277
FaeI CATG 1 cut(s) 91
FaiI YATR 6 cut(s) 89, 114, 189, 416, 446, 491
FalI AAGNNNNNCTT 1 cut(s) 550
FatI CATG 1 cut(s) 87
FauI CCCGC 1 cut(s) 301
FbaI TGATCA 1 cut(s) 115
Fnu4HI GCNGC 2 cut(s) 288, 363
FokI GGATG 2 cut(s) 368, 392
Fsp4HI GCNGC 2 cut(s) 288, 363
FspBI CTAG 1 cut(s) 240
GluI GCNGC 2 cut(s) 288, 363
GsuI CTGGAG 1 cut(s) 183
HaeIII GGCC 1 cut(s) 271
Hin1II CATG 1 cut(s) 91
HindIII AAGCTT 3 cut(s) 108, 174, 559
HinfI GANTC 2 cut(s) 9, 314
HphI GGTGA 2 cut(s) 116, 323
Hpy188I TCNGA 2 cut(s) 8, 127
Hpy188III TCNNGA 3 cut(s) 83, 524, 545
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 2 cut(s) 61, 255
HpyCH4IV ACGT 1 cut(s) 538
HpyCH4V TGCA 3 cut(s) 287, 298, 448
HpyF3I CTNAG 1 cut(s) 124
HpySE526I ACGT 1 cut(s) 538
Hsp92II CATG 1 cut(s) 91
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 5 cut(s) 115, 203, 336, 502, 541
LpnPI CCDG 9 cut(s) 61, 180, 186, 213, 264, 285, 291, 509, 558
Lsp1109I GCAGC 2 cut(s) 299, 374
LweI GCATC 1 cut(s) 285
MabI ACCWGGT 1 cut(s) 277
MaeI CTAG 1 cut(s) 240
MaeII ACGT 1 cut(s) 538
MaeIII GTNAC 1 cut(s) 229
MalI GATC 5 cut(s) 117, 205, 338, 504, 543
MboI GATC 5 cut(s) 115, 203, 336, 502, 541
MboII GAAGA 5 cut(s) 7, 130, 152, 304, 346
MluCI AATT 4 cut(s) 151, 407, 430, 476
MlyI GAGTC 1 cut(s) 18
MmeI TCCRAC 2 cut(s) 357, 403
MnlI CCTC 5 cut(s) 346, 363, 387, 390, 563
MroXI GAANNNNTTC 1 cut(s) 95
MseI TTAA 3 cut(s) 146, 438, 513
MslI CAYNNNNRTG 1 cut(s) 265
MspR9I CCNGG 2 cut(s) 201, 279
MvaI CCWGG 2 cut(s) 201, 279
NdeII GATC 5 cut(s) 115, 203, 336, 502, 541
NlaIII CATG 1 cut(s) 91
PdmI GAANNNNTTC 1 cut(s) 95
PfeI GAWTC 1 cut(s) 314
PfoI TCCNGGA 1 cut(s) 199
PkrI GCNGC 2 cut(s) 289, 364
PleI GAGTC 1 cut(s) 17
PpsI GAGTC 1 cut(s) 17
Psp6I CCWGG 2 cut(s) 199, 277
PspGI CCWGG 2 cut(s) 199, 277
RseI CAYNNNNRTG 1 cut(s) 265
SaqAI TTAA 3 cut(s) 146, 438, 513
SatI GCNGC 2 cut(s) 288, 363
Sau3AI GATC 5 cut(s) 115, 203, 336, 502, 541
SchI GAGTC 1 cut(s) 18
ScrFI CCNGG 2 cut(s) 201, 279
SexAI ACCWGGT 1 cut(s) 277
SfaNI GCATC 1 cut(s) 285
SmiMI CAYNNNNRTG 1 cut(s) 265
Sse9I AATT 4 cut(s) 151, 407, 430, 476
SsiI CCGC 2 cut(s) 308, 389
SspMI CTAG 1 cut(s) 240
StyD4I CCNGG 2 cut(s) 199, 277
TaiI ACGT 1 cut(s) 541
TaqI TCGA 4 cut(s) 25, 63, 84, 317
TasI AATT 4 cut(s) 151, 407, 430, 476
TfiI GAWTC 1 cut(s) 314
Tru1I TTAA 3 cut(s) 146, 438, 513
Tru9I TTAA 3 cut(s) 146, 438, 513
TscAI CASTG 1 cut(s) 80
TseI GCWGC 2 cut(s) 287, 362
TspDTI ATGAA 2 cut(s) 104, 431
TspRI CASTG 1 cut(s) 80
XapI RAATTY 1 cut(s) 430
XmnI GAANNNNTTC 1 cut(s) 95
XspI CTAG 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.