AT1G68370

Chaperone protein dnaJ

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013340
Physical Location & Seq
Reverse (-)
25631689 .. 25634780
3092 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68370.1

Sequence Viewer

Length: 1233 bp
ATGAGCGCGAAAAAGCTTGAAGGTTCGTCGGCTCCGGCGAATCGACGGGATCCGTACGAGGTCCTTTGTGTATCAAAGGACGCTAATGATCAAGAAATCAAATCCGCTTACAGAAAATTAGCTCTCAAGTATCATCCGGATAAGAATGCGAACAATCCTGATGCTTCTGAGCTTTTCAAGGAAGTTGCATTTTCGTATAGCATTTTGTCTGATCCTGAAAAGAGAAGGCACTATGACAATGCAGGATTTGAGGCACTCGATGCTGATGGAATGGATATGGAAATTGACTTGTCAAACCTCGGGACCGTAAATACCATGTTTGCAGCATTGTTCAGCAAACTAGGTGTGCCTATCAAGACTACTGTATCTGCTAATGTTCTTGAAGAGGCTATGAATGGAACTGTTACAGTTAGGCCTCTTCCTATTGGAACATCAGTTAGTGGGAAGGTTGAGAAGCAATGCGCTCATTTTTTTGGAGTTACGATAAGTGAACAACAAGCTGAATCAGGGGTTGTTGTTAGAGTAACTTCAACAGCACAAAGTAAATTTAAGTTACTTTATTTTGAGCAAGATTCAAGTGGTGGCTATGGATTGGCCTTACAGGAAGAGCGTGAGAAAACAGGGAAGGTGACATCAGCTGGCATGTATTTCTTACATTTTCAAGTGTATAGAATGGATACAACTGTCAATGCGTTGGCTGCAGCCAAGGACCCTGAATCTGCTTTCTTCAAGCGATTGGAAGGTCTTCAACCTTGTGAGGTTTCGGAACTGAAAGCTGGCACGCATATATTTGCAGTTTATGGTGATAATTTCTTTAAGACTGCATCTTACACGATTGAAGCACTCTGTGCCAAGACCTATGAGGATACAACAGAGAAGTTAAAGGAGATTGAAGCTCAAATCTTAAGAAAGAGAAACGAACTGCGGCAGTTTGAAACAGAGTACCGAAAAGCTTTGGCGCGGTTTCAAGAAGTTACCAACAGATATACACAGGAGAAACAAACTGTGGATGAACTGCTAAAGCAACGGGATACAATCCATTCGACCTTCTCTGTTGTGAAGACACCAAGCGGCAACAACTTGAGCAATGGAAGTAGCAGCAAAGCTCAGGGAGATGAATCAAAAGGTGATGGGGATAGTGCGGGAGAAGAAGGCGGAACAGAGAATAGAGACAAATCCAAGAGGAAATGGTTCAACTTGAACCTAAAAGGATCTGATAAGAAGCTTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

410

Amino Acids

45.48

Weight (kDa)

6.18

Isoelectric Point (pI)

33.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 17 - 79 2.3e-26 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013340)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68370
fragaria_vesca FvH4_4g27000
malus_domestica MD13G1039100.v1.1 MD16G1040000.v1.1
prunus_persica Prupe.1G314100_v2.0.a1 Prupe.1G314100_v2.0.a1 Prupe.1G314100_v2.0.a1
pyrus_communis pycom13g03360
rosa_chinensis RchiOBHm_Chr4g0434801
rosa_laevigata RLG00000006648
rosa_multiflora Rmu_sc0000179.1_g000002
rosa_roxburghii Rroxscaffold_5G00376010
rosa_rugosa Rorug04G0278500
rosa_samantha Rh4AG335000 Rh4BG343500 Rh4CG357900 Rh4DG337400
rosa_wichuraiana Rw4G029210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 8, 961
AccIII TCCGGA 1 cut(s) 136
AciI CCGC 6 cut(s) 105, 925, 961, 1071, 1142, 1155
AclWI GGATC 4 cut(s) 44, 57, 206, 1219
AcsI RAATTY 1 cut(s) 545
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 2 cut(s) 56, 944
AflII CTTAAG 1 cut(s) 904
Alw26I GTCTC 1 cut(s) 1164
AlwI GGATC 4 cut(s) 44, 57, 206, 1219
Ama87I CYCGRG 1 cut(s) 299
Aor13HI TCCGGA 1 cut(s) 136
AoxI GGCC 2 cut(s) 413, 594
ApeKI GCWGC 4 cut(s) 323, 698, 701, 1098
ApoI RAATTY 1 cut(s) 545
Asp700I GAANNNNTTC 2 cut(s) 744, 1190
AspLEI GCGC 3 cut(s) 8, 464, 961
AspS9I GGNCC 3 cut(s) 61, 303, 709
AsuHPI GGTGA 3 cut(s) 640, 815, 1139
AvaI CYCGRG 1 cut(s) 299
AvaII GGWCC 3 cut(s) 61, 303, 709
BaeI ACNNNNGTAYC 4 cut(s) 348, 381, 669, 702
BamHI GGATCC 1 cut(s) 49
BbsI GAAGAC 2 cut(s) 737, 1067
BbvI GCAGC 4 cut(s) 335, 685, 713, 1110
BccI CCATC 2 cut(s) 260, 1124
BciVI GTATCC 3 cut(s) 670, 859, 1024
BclI TGATCA 1 cut(s) 88
BcoDI GTCTC 1 cut(s) 1164
BfaI CTAG 1 cut(s) 341
BfmI CTRYAG 1 cut(s) 699
BfrI CTTAAG 1 cut(s) 904
BfuI GTATCC 3 cut(s) 670, 859, 1024
BisI GCNGC 6 cut(s) 324, 699, 702, 926, 1072, 1099
BlsI GCNGC 6 cut(s) 325, 700, 703, 927, 1073, 1100
Bme18I GGWCC 3 cut(s) 61, 303, 709
BmeT110I CYCGRG 1 cut(s) 299
BmgT120I GGNCC 3 cut(s) 61, 303, 709
BmiI GGNNCC 4 cut(s) 33, 51, 304, 711
BmsI GCATC 3 cut(s) 151, 250, 833
BpiI GAAGAC 2 cut(s) 737, 1067
Bpu10I CCTNAGC 1 cut(s) 1107
BpuEI CTTGAG 2 cut(s) 110, 1102
BsaJI CCNNGG 2 cut(s) 298, 705
BsaWI WCCGGW 1 cut(s) 136
Bse3DI GCAATG 2 cut(s) 464, 1093
BseAI TCCGGA 1 cut(s) 136
BseDI CCNNGG 2 cut(s) 298, 705
BseGI GGATG 2 cut(s) 133, 1015
BseMI GCAATG 2 cut(s) 464, 1093
BseMII CTCAG 2 cut(s) 159, 1121
BseXI GCAGC 4 cut(s) 335, 685, 713, 1110
Bsh1236I CGCG 2 cut(s) 8, 961
BshFI GGCC 2 cut(s) 415, 596
BsiHKCI CYCGRG 1 cut(s) 299
BsiSI CCGG 2 cut(s) 35, 137
BsiWI CGTACG 1 cut(s) 54
BslFI GGGAC 1 cut(s) 316
BsmAI GTCTC 1 cut(s) 1164
BsmFI GGGAC 1 cut(s) 316
BsmI GAATGC 1 cut(s) 151
BsnI GGCC 2 cut(s) 415, 596
BsoBI CYCGRG 1 cut(s) 299
Bsp13I TCCGGA 1 cut(s) 136
Bsp143I GATC 4 cut(s) 49, 88, 211, 1211
BspACI CCGC 6 cut(s) 105, 925, 961, 1071, 1142, 1155
BspANI GGCC 2 cut(s) 415, 596
BspCNI CTCAG 2 cut(s) 160, 1120
BspEI TCCGGA 1 cut(s) 136
BspFNI CGCG 2 cut(s) 8, 961
BspLI GGNNCC 4 cut(s) 33, 51, 304, 711
BspMAI CTGCAG 1 cut(s) 703
BspPI GGATC 4 cut(s) 44, 57, 206, 1219
BspQI GCTCTTC 1 cut(s) 600
BspTI CTTAAG 1 cut(s) 904
BsrDI GCAATG 2 cut(s) 464, 1093
BssECI CCNNGG 2 cut(s) 298, 705
BssMI GATC 4 cut(s) 49, 88, 211, 1211
BssT1I CCWWGG 1 cut(s) 705
Bst4CI ACNGT 6 cut(s) 307, 364, 403, 409, 685, 1006
Bst6I CTCTTC 3 cut(s) 378, 423, 600
BstAFI CTTAAG 1 cut(s) 904
BstAPI GCANNNNNTGC 2 cut(s) 260, 848
BstC8I GCNNGC 3 cut(s) 640, 778, 782
BstDEI CTNAG 2 cut(s) 168, 1107
BstF5I GGATG 2 cut(s) 133, 1015
BstFNI CGCG 2 cut(s) 8, 961
BstHHI GCGC 3 cut(s) 8, 464, 961
BstKTI GATC 4 cut(s) 52, 91, 214, 1214
BstMAI GTCTC 1 cut(s) 1164
BstMBI GATC 4 cut(s) 49, 88, 211, 1211
BstMWI GCNNNNNNNGC 3 cut(s) 260, 698, 848
BstNSI RCATGY 1 cut(s) 646
BstSFI CTRYAG 1 cut(s) 699
BstUI CGCG 2 cut(s) 8, 961
BstV1I GCAGC 4 cut(s) 335, 685, 713, 1110
BstV2I GAAGAC 2 cut(s) 737, 1067
BstX2I RGATCY 2 cut(s) 49, 1211
BstYI RGATCY 2 cut(s) 49, 1211
BsuI GTATCC 3 cut(s) 670, 859, 1024
BsuRI GGCC 2 cut(s) 415, 596
BtsCI GGATG 2 cut(s) 133, 1015
Cac8I GCNNGC 3 cut(s) 640, 778, 782
CfoI GCGC 3 cut(s) 8, 464, 961
Cfr13I GGNCC 3 cut(s) 61, 303, 709
CseI GACGC 1 cut(s) 89
Csp6I GTAC 2 cut(s) 55, 943
CviAII CATG 2 cut(s) 316, 643
CviQI GTAC 2 cut(s) 55, 943
DdeI CTNAG 2 cut(s) 168, 1107
DpnI GATC 4 cut(s) 51, 90, 213, 1213
DpnII GATC 4 cut(s) 49, 88, 211, 1211
DraIII CACNNNGTG 1 cut(s) 848
Eam1104I CTCTTC 3 cut(s) 378, 423, 600
EarI CTCTTC 3 cut(s) 378, 423, 600
EciI GGCGGA 1 cut(s) 1170
Eco130I CCWWGG 1 cut(s) 705
Eco147I AGGCCT 1 cut(s) 415
Eco47I GGWCC 3 cut(s) 61, 303, 709
Eco88I CYCGRG 1 cut(s) 299
EcoO109I RGGNCCY 2 cut(s) 61, 709
EcoT14I CCWWGG 1 cut(s) 705
ErhI CCWWGG 1 cut(s) 705
FaeI CATG 2 cut(s) 319, 646
FaqI GGGAC 1 cut(s) 316
FatI CATG 2 cut(s) 315, 642
FauI CCCGC 1 cut(s) 1135
FbaI TGATCA 1 cut(s) 88
Fnu4HI GCNGC 6 cut(s) 324, 699, 702, 926, 1072, 1099
FokI GGATG 2 cut(s) 120, 1022
Fsp4HI GCNGC 6 cut(s) 324, 699, 702, 926, 1072, 1099
FspBI CTAG 1 cut(s) 341
GlaI GCGC 3 cut(s) 7, 463, 960
GluI GCNGC 6 cut(s) 324, 699, 702, 926, 1072, 1099
HaeIII GGCC 2 cut(s) 415, 596
HapII CCGG 2 cut(s) 35, 137
HgaI GACGC 1 cut(s) 89
HhaI GCGC 3 cut(s) 8, 464, 961
Hin1II CATG 2 cut(s) 319, 646
Hin6I GCGC 3 cut(s) 6, 462, 959
HinP1I GCGC 3 cut(s) 6, 462, 959
HindIII AAGCTT 3 cut(s) 14, 951, 1223
HinfI GANTC 5 cut(s) 40, 503, 572, 716, 1118
HpaII CCGG 2 cut(s) 35, 137
HphI GGTGA 3 cut(s) 640, 815, 1139
Hpy166II GTNNAC 1 cut(s) 491
Hpy188I TCNGA 4 cut(s) 169, 211, 766, 1216
Hpy188III TCNNGA 8 cut(s) 92, 137, 158, 215, 301, 355, 380, 968
Hpy8I GTNNAC 1 cut(s) 491
Hpy99I CGWCG 2 cut(s) 31, 48
HpyAV CCTTC 7 cut(s) 14, 219, 439, 619, 734, 1057, 1145
HpyCH4III ACNGT 6 cut(s) 307, 364, 403, 409, 685, 1006
HpyCH4V TGCA 6 cut(s) 188, 242, 323, 701, 794, 824
HpyF10VI GCNNNNNNNGC 3 cut(s) 260, 698, 848
HpyF3I CTNAG 2 cut(s) 168, 1107
Hsp92II CATG 2 cut(s) 319, 646
HspAI GCGC 3 cut(s) 6, 462, 959
Kpn2I TCCGGA 1 cut(s) 136
Ksp22I TGATCA 1 cut(s) 88
Kzo9I GATC 4 cut(s) 49, 88, 211, 1211
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 1 cut(s) 37
Lsp1109I GCAGC 4 cut(s) 335, 685, 713, 1110
LweI GCATC 3 cut(s) 151, 250, 833
MaeI CTAG 1 cut(s) 341
MaeIII GTNAC 6 cut(s) 403, 478, 523, 552, 628, 973
MalI GATC 4 cut(s) 51, 90, 213, 1213
MboI GATC 4 cut(s) 49, 88, 211, 1211
MboII GAAGA 7 cut(s) 395, 410, 617, 718, 737, 1072, 1160
MflI RGATCY 2 cut(s) 49, 1211
MluCI AATT 4 cut(s) 116, 282, 545, 808
MnlI CCTC 8 cut(s) 52, 244, 308, 379, 426, 751, 856, 1176
MroI TCCGGA 1 cut(s) 136
MroXI GAANNNNTTC 2 cut(s) 744, 1190
MseI TTAA 4 cut(s) 549, 816, 881, 905
MspA1I CMGCKG 1 cut(s) 638
MspCI CTTAAG 1 cut(s) 904
MspI CCGG 2 cut(s) 35, 137
Mva1269I GAATGC 1 cut(s) 151
MvnI CGCG 2 cut(s) 8, 961
MwoI GCNNNNNNNGC 3 cut(s) 260, 698, 848
NdeII GATC 4 cut(s) 49, 88, 211, 1211
NlaIII CATG 2 cut(s) 319, 646
NlaIV GGNNCC 4 cut(s) 33, 51, 304, 711
NmuCI GTSAC 1 cut(s) 628
NspI RCATGY 1 cut(s) 646
PceI AGGCCT 1 cut(s) 415
PciSI GCTCTTC 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PctI GAATGC 1 cut(s) 151
PdmI GAANNNNTTC 2 cut(s) 744, 1190
PfeI GAWTC 5 cut(s) 40, 503, 572, 716, 1118
Pfl23II CGTACG 1 cut(s) 54
PkrI GCNGC 6 cut(s) 325, 700, 703, 927, 1073, 1100
PpuMI RGGWCCY 2 cut(s) 61, 709
Psp5II RGGWCCY 2 cut(s) 61, 709
PspLI CGTACG 1 cut(s) 54
PspN4I GGNNCC 4 cut(s) 33, 51, 304, 711
PspPI GGNCC 3 cut(s) 61, 303, 709
PspPPI RGGWCCY 2 cut(s) 61, 709
PstI CTGCAG 1 cut(s) 703
PsuI RGATCY 2 cut(s) 49, 1211
PvuII CAGCTG 1 cut(s) 638
RsaI GTAC 2 cut(s) 56, 944
RsaNI GTAC 2 cut(s) 55, 943
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 4 cut(s) 549, 816, 881, 905
SatI GCNGC 6 cut(s) 324, 699, 702, 926, 1072, 1099
Sau3AI GATC 4 cut(s) 49, 88, 211, 1211
Sau96I GGNCC 3 cut(s) 61, 303, 709
SfaNI GCATC 3 cut(s) 151, 250, 833
SfcI CTRYAG 1 cut(s) 699
SinI GGWCC 3 cut(s) 61, 303, 709
SmlI CTYRAG 3 cut(s) 125, 904, 1081
SmoI CTYRAG 3 cut(s) 125, 904, 1081
Sse9I AATT 4 cut(s) 116, 282, 545, 808
SseBI AGGCCT 1 cut(s) 415
SsiI CCGC 6 cut(s) 105, 925, 961, 1071, 1142, 1155
SspMI CTAG 1 cut(s) 341
StuI AGGCCT 1 cut(s) 415
StyI CCWWGG 1 cut(s) 705
TaaI ACNGT 6 cut(s) 307, 364, 403, 409, 685, 1006
TaqI TCGA 3 cut(s) 43, 258, 1043
TasI AATT 4 cut(s) 116, 282, 545, 808
TauI GCSGC 2 cut(s) 928, 1074
TfiI GAWTC 5 cut(s) 40, 503, 572, 716, 1118
Tru1I TTAA 4 cut(s) 549, 816, 881, 905
Tru9I TTAA 4 cut(s) 549, 816, 881, 905
TseFI GTSAC 1 cut(s) 628
TseI GCWGC 4 cut(s) 323, 698, 701, 1098
Tsp45I GTSAC 1 cut(s) 628
TspDTI ATGAA 3 cut(s) 407, 1026, 1131
TspGWI ACGGA 1 cut(s) 42
Vha464I CTTAAG 1 cut(s) 904
VpaK11BI GGWCC 3 cut(s) 61, 303, 709
XapI RAATTY 1 cut(s) 545
XceI RCATGY 1 cut(s) 646
XmnI GAANNNNTTC 2 cut(s) 744, 1190
XspI CTAG 1 cut(s) 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.