AT1G68640
BZIP Family

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25769576 .. 25772650
3075 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68640.1

Sequence Viewer

Length: 1359 bp
ATGCAGAGCAGCTTCAAAACCGTTCCTTTCACTCCTGATTTCTACTCTCAGTCTTCTTACTTCTTCAGAGGAGATAGTTGTCTTGAGGAGTTTCATCAACCAGTCAATGGTTTTCACCATGAAGAAGCTATCGATTTAAGTCCAAATGTCACTATTGCTTCAGCTAACTTACACTACACGACGTTTGATACGGTTATGGATTGTGGTGGTGGTGGTGGTGGTGGCTTGAGGGAGAGACTTGAAGGAGGAGAAGAGGAGTGTTTGGACACAGGGCAACTAGTGTACCAGAAAGGGACAAGATTAGTAGGAGGAGGAGTAGGAGAAGTGAACAGCAGTTGGTGTGATTCGGTTTCAGCTATGGCTGATAACAGTCAACATACTGACACTTCCACAGATATTGATACTGATGACAAGACTCAGTTGAATGGAGGTCATCAAGGGATGCTATTGGCTACAAATTGTTCAGATCAATCCAATGTGAAATCTAGTGATCAAAGGACACTTCGTCGACTTGCTCAGAACCGGGAGGCTGCTAGGAAAAGTCGGTTGAGGAAAAAGGCATATGTTCAGCAACTTGAGAATAGTCGAATCAGGCTTGCACAGCTAGAGGAAGAGCTCAAAAGAGCTCGCCAACAGGGATCTTTGGTTGAAAGAGGAGTTTCAGCGGATCACACGCATTTGGCAGCCGGAAATGGTGTCTTTTCATTTGAATTGGAATATACACGTTGGAAGGAAGAACATCAAAGAATGATCAACGACTTAAGATCGGGTGTGAATTCGCAGTTAGGTGACAACGATCTACGCGTTCTAGTGGATGCTGTGATGAGTCACTATGATGAAATATTCAGGCTAAAGGGAATTGGTACTAAAGTTGACGTCTTTCATATGCTCTCAGGCATGTGGAAGACACCTGCCGAGAGATTTTTCATGTGGTTAGGTGGATTTAGATCATCAGAGTTACTTAAGATATTGGGGAACCATGTGGATCCATTGACGGACCAGCAGTTGATAGGCATTTGCAACCTTCAGCAATCGTCTCAACAAGCAGAGGATGCATTGTCACAAGGCATGGAAGCTCTACAACAATCACTTCTCGAGACGCTTTCTTCTGCTTCAATGGGTCCAAACTCTTCAGCAAATGTTGCAGATTATATGGGTCATATGGCTATGGCTATGGGCAAACTTGGCACTCTTGAAAACTTCCTTCGCCAGGCTGATTTATTGAGGCAACAAACTCTGCAACAGCTTCACAGAATTCTCACCACACGACAAGCTGCTCGCGCCTTTTTGGTCATCCACGATTATATTTCTCGGCTTAGAGCACTTAGCTCTCTATGGTTAGCCAGACCTAGAGACTAA

Protein Analysis

452

Amino Acids

50.46

Weight (kDa)

5.86

Isoelectric Point (pI)

51.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 166 - 206 8.2e-07 bZIP transcription factor
DOG1 PF14144 251 - 324 1.9e-27 Seed dormancy control
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 919
AatII GACGTC 1 cut(s) 879
Acc36I ACCTGC 1 cut(s) 919
AccB7I CCANNNNNTGG 1 cut(s) 107
AccI GTMKAC 1 cut(s) 508
AccII CGCG 2 cut(s) 804, 1281
AciI CCGC 1 cut(s) 665
AclWI GGATC 4 cut(s) 646, 675, 980, 993
AcsI RAATTY 2 cut(s) 775, 1254
AcuI CTGAAG 4 cut(s) 49, 144, 1010, 1116
AcyI GRCGYC 1 cut(s) 876
AfaI GTAC 2 cut(s) 284, 865
AfiI CCNNNNNNNGG 2 cut(s) 107, 1210
AflII CTTAAG 2 cut(s) 760, 962
AflIII ACRYGT 2 cut(s) 722, 802
AgsI TTSAA 7 cut(s) 16, 242, 424, 650, 710, 1116, 1196
AhdI GACNNNNNGTC 1 cut(s) 504
AhlI ACTAGT 1 cut(s) 277
AjnI CCWGG 1 cut(s) 1209
Alw21I GWGCWC 3 cut(s) 618, 628, 1324
Alw26I GTCTC 4 cut(s) 229, 1041, 1091, 1347
AlwI GGATC 4 cut(s) 646, 675, 980, 993
Ama87I CYCGRG 1 cut(s) 1094
ApeKI GCWGC 4 cut(s) 9, 530, 683, 1274
ApoI RAATTY 2 cut(s) 775, 1254
AspLEI GCGC 1 cut(s) 1283
AspS9I GGNCC 2 cut(s) 997, 1121
AsuC2I CCSGG 1 cut(s) 524
AsuHPI GGTGA 3 cut(s) 107, 800, 1252
AvaI CYCGRG 1 cut(s) 1094
AvaII GGWCC 2 cut(s) 997, 1121
BaeI ACNNNNGTAYC 4 cut(s) 266, 299, 855, 888
BamHI GGATCC 1 cut(s) 985
BanII GRGCYC 2 cut(s) 618, 628
BbsI GAAGAC 2 cut(s) 45, 911
Bbv12I GWGCWC 3 cut(s) 618, 628, 1324
BbvI GCAGC 4 cut(s) 21, 517, 695, 1261
BciT130I CCWGG 1 cut(s) 1211
BclI TGATCA 2 cut(s) 490, 750
BcnI CCSGG 1 cut(s) 524
BcoDI GTCTC 4 cut(s) 229, 1041, 1091, 1347
BcuI ACTAGT 1 cut(s) 277
BfaI CTAG 6 cut(s) 278, 486, 534, 605, 809, 1350
BfrI CTTAAG 2 cut(s) 760, 962
BfuAI ACCTGC 1 cut(s) 919
BisI GCNGC 4 cut(s) 10, 531, 684, 1275
BlsI GCNGC 4 cut(s) 11, 532, 685, 1276
Bme1390I CCNGG 2 cut(s) 524, 1211
Bme18I GGWCC 2 cut(s) 997, 1121
BmeRI GACNNNNNGTC 1 cut(s) 504
BmeT110I CYCGRG 1 cut(s) 1094
BmgT120I GGNCC 2 cut(s) 997, 1121
BmiI GGNNCC 3 cut(s) 977, 987, 1122
BmrFI CCNGG 2 cut(s) 524, 1211
BmsI GCATC 3 cut(s) 432, 805, 1042
BpiI GAAGAC 2 cut(s) 45, 911
BpuEI CTTGAG 3 cut(s) 104, 247, 596
BpuMI CCSGG 1 cut(s) 524
Bsa29I ATCGAT 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 946
BsaHI GRCGYC 1 cut(s) 876
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 2 cut(s) 107, 1210
Bse1I ACTGG 1 cut(s) 101
Bse8I GATNNNNATC 1 cut(s) 946
BseBI CCWGG 1 cut(s) 1211
BseCI ATCGAT 1 cut(s) 132
BseGI GGATG 4 cut(s) 447, 820, 1057, 1293
BseJI GATNNNNATC 1 cut(s) 946
BseLI CCNNNNNNNGG 2 cut(s) 107, 1210
BseMII CTCAG 4 cut(s) 62, 431, 530, 906
BseNI ACTGG 1 cut(s) 101
BseRI GAGGAG 7 cut(s) 84, 101, 261, 269, 324, 327, 669
BseXI GCAGC 4 cut(s) 21, 517, 695, 1261
Bsh1236I CGCG 2 cut(s) 804, 1281
BshVI ATCGAT 1 cut(s) 132
BsiHKAI GWGCWC 3 cut(s) 618, 628, 1324
BsiHKCI CYCGRG 1 cut(s) 1094
BsiSI CCGG 2 cut(s) 523, 687
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 2 cut(s) 107, 1210
BsmAI GTCTC 4 cut(s) 229, 1041, 1091, 1347
BsmBI CGTCTC 2 cut(s) 1041, 1091
BsmFI GGGAC 1 cut(s) 307
BsoBI CYCGRG 1 cut(s) 1094
Bsp1286I GDGCHC 3 cut(s) 618, 628, 1324
Bsp143I GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
BspACI CCGC 1 cut(s) 665
BspCNI CTCAG 4 cut(s) 61, 430, 529, 905
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 2 cut(s) 804, 1281
BspLI GGNNCC 3 cut(s) 977, 987, 1122
BspMI ACCTGC 1 cut(s) 919
BspPI GGATC 4 cut(s) 646, 675, 980, 993
BspQI GCTCTTC 1 cut(s) 606
BspTI CTTAAG 2 cut(s) 760, 962
BsrI ACTGG 1 cut(s) 101
BssMI GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
BssNI GRCGYC 1 cut(s) 876
Bst2UI CCWGG 1 cut(s) 1211
Bst4CI ACNGT 3 cut(s) 22, 193, 371
Bst6I CTCTTC 3 cut(s) 246, 606, 1135
BstACI GRCGYC 1 cut(s) 876
BstAFI CTTAAG 2 cut(s) 760, 962
BstAPI GCANNNNNTGC 2 cut(s) 1052, 1142
BstC8I GCNNGC 3 cut(s) 597, 628, 1279
BstDEI CTNAG 6 cut(s) 48, 417, 516, 892, 1316, 1325
BstENI CCTNNNNNAGG 1 cut(s) 1208
BstF5I GGATG 4 cut(s) 447, 820, 1057, 1293
BstFNI CGCG 2 cut(s) 804, 1281
BstHHI GCGC 1 cut(s) 1283
BstKTI GATC 9 cut(s) 469, 493, 641, 670, 753, 767, 799, 950, 988
BstMAI GTCTC 4 cut(s) 229, 1041, 1091, 1347
BstMBI GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
BstMWI GCNNNNNNNGC 5 cut(s) 601, 1052, 1142, 1185, 1280
BstNI CCWGG 1 cut(s) 1211
BstNSI RCATGY 1 cut(s) 901
BstSCI CCNGG 2 cut(s) 522, 1209
BstUI CGCG 2 cut(s) 804, 1281
BstV1I GCAGC 4 cut(s) 21, 517, 695, 1261
BstV2I GAAGAC 2 cut(s) 45, 911
BstX2I RGATCY 2 cut(s) 638, 985
BstYI RGATCY 2 cut(s) 638, 985
Bsu15I ATCGAT 1 cut(s) 132
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 4 cut(s) 447, 820, 1057, 1293
BveI ACCTGC 1 cut(s) 919
Cac8I GCNNGC 3 cut(s) 597, 628, 1279
CfoI GCGC 1 cut(s) 1283
Cfr13I GGNCC 2 cut(s) 997, 1121
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 1 cut(s) 1108
Csp6I GTAC 2 cut(s) 283, 864
CspCI CAANNNNNGTGG 2 cut(s) 379, 414
CviAII CATG 5 cut(s) 119, 898, 928, 980, 1069
CviQI GTAC 2 cut(s) 283, 864
DdeI CTNAG 6 cut(s) 48, 417, 516, 892, 1316, 1325
DpnI GATC 9 cut(s) 468, 492, 640, 669, 752, 766, 798, 949, 987
DpnII GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
DriI GACNNNNNGTC 1 cut(s) 504
Eam1104I CTCTTC 3 cut(s) 246, 606, 1135
Eam1105I GACNNNNNGTC 1 cut(s) 504
EarI CTCTTC 3 cut(s) 246, 606, 1135
Ecl136II GAGCTC 2 cut(s) 616, 626
Eco24I GRGCYC 2 cut(s) 618, 628
Eco47I GGWCC 2 cut(s) 997, 1121
Eco53kI GAGCTC 2 cut(s) 616, 626
Eco57I CTGAAG 4 cut(s) 49, 144, 1010, 1116
Eco88I CYCGRG 1 cut(s) 1094
EcoICRI GAGCTC 2 cut(s) 616, 626
EcoNI CCTNNNNNAGG 1 cut(s) 1208
EcoRI GAATTC 2 cut(s) 775, 1254
EcoRII CCWGG 1 cut(s) 1209
EcoT22I ATGCAT 1 cut(s) 1057
EcoT38I GRGCYC 2 cut(s) 618, 628
Esp3I CGTCTC 2 cut(s) 1041, 1091
FaeI CATG 5 cut(s) 122, 901, 931, 983, 1072
FaqI GGGAC 1 cut(s) 307
FatI CATG 5 cut(s) 118, 897, 927, 979, 1068
FauNDI CATATG 3 cut(s) 562, 885, 1161
FbaI TGATCA 2 cut(s) 490, 750
FblI GTMKAC 1 cut(s) 508
Fnu4HI GCNGC 4 cut(s) 10, 531, 684, 1275
FokI GGATG 4 cut(s) 454, 827, 1064, 1280
FriOI GRGCYC 2 cut(s) 618, 628
Fsp4HI GCNGC 4 cut(s) 10, 531, 684, 1275
FspBI CTAG 6 cut(s) 278, 486, 534, 605, 809, 1350
GlaI GCGC 1 cut(s) 1282
GluI GCNGC 4 cut(s) 10, 531, 684, 1275
HapII CCGG 2 cut(s) 523, 687
HgaI GACGC 1 cut(s) 1108
HhaI GCGC 1 cut(s) 1283
Hin1I GRCGYC 1 cut(s) 876
Hin1II CATG 5 cut(s) 122, 901, 931, 983, 1072
Hin6I GCGC 1 cut(s) 1281
HinP1I GCGC 1 cut(s) 1281
HincII GTYRAC 3 cut(s) 374, 509, 874
HindII GTYRAC 3 cut(s) 374, 509, 874
HinfI GANTC 4 cut(s) 344, 415, 588, 826
HpaII CCGG 2 cut(s) 523, 687
HphI GGTGA 3 cut(s) 107, 800, 1252
Hpy166II GTNNAC 5 cut(s) 283, 328, 374, 509, 874
Hpy188I TCNGA 4 cut(s) 68, 466, 519, 955
Hpy188III TCNNGA 5 cut(s) 35, 83, 1094, 1096, 1193
Hpy8I GTNNAC 5 cut(s) 283, 328, 374, 509, 874
Hpy99I CGWCG 2 cut(s) 184, 510
HpyAV CCTTC 4 cut(s) 236, 724, 1034, 1214
HpyCH4III ACNGT 3 cut(s) 22, 193, 371
HpyCH4IV ACGT 3 cut(s) 182, 724, 876
HpyCH4V TGCA 6 cut(s) 4, 599, 1020, 1055, 1145, 1240
HpyF10VI GCNNNNNNNGC 5 cut(s) 601, 1052, 1142, 1185, 1280
HpyF3I CTNAG 6 cut(s) 48, 417, 516, 892, 1316, 1325
HpySE526I ACGT 3 cut(s) 182, 724, 876
Hsp92I GRCGYC 1 cut(s) 876
Hsp92II CATG 5 cut(s) 122, 901, 931, 983, 1072
HspAI GCGC 1 cut(s) 1281
Ksp22I TGATCA 2 cut(s) 490, 750
Kzo9I GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
LguI GCTCTTC 1 cut(s) 606
Lsp1109I GCAGC 4 cut(s) 21, 517, 695, 1261
LweI GCATC 3 cut(s) 432, 805, 1042
MaeI CTAG 6 cut(s) 278, 486, 534, 605, 809, 1350
MaeII ACGT 3 cut(s) 182, 724, 876
MaeIII GTNAC 5 cut(s) 148, 788, 827, 957, 1059
MalI GATC 9 cut(s) 468, 492, 640, 669, 752, 766, 798, 949, 987
MboI GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
MboII GAAGA 9 cut(s) 45, 55, 134, 263, 623, 746, 916, 1098, 1122
MflI RGATCY 2 cut(s) 638, 985
MhlI GDGCHC 3 cut(s) 618, 628, 1324
MluCI AATT 5 cut(s) 457, 710, 775, 858, 1254
MluI ACGCGT 1 cut(s) 802
MlyI GAGTC 2 cut(s) 409, 835
MmeI TCCRAC 1 cut(s) 707
Mph1103I ATGCAT 1 cut(s) 1057
MseI TTAA 3 cut(s) 137, 761, 963
MslI CAYNNNNRTG 1 cut(s) 834
MspA1I CMGCKG 1 cut(s) 665
MspCI CTTAAG 2 cut(s) 760, 962
MspI CCGG 2 cut(s) 523, 687
MspR9I CCNGG 2 cut(s) 524, 1211
MvaI CCWGG 1 cut(s) 1211
MvnI CGCG 2 cut(s) 804, 1281
MwoI GCNNNNNNNGC 5 cut(s) 601, 1052, 1142, 1185, 1280
NciI CCSGG 1 cut(s) 524
NdeI CATATG 3 cut(s) 562, 885, 1161
NdeII GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
NlaIII CATG 5 cut(s) 122, 901, 931, 983, 1072
NlaIV GGNNCC 3 cut(s) 977, 987, 1122
NmeAIII GCCGAG 2 cut(s) 940, 1291
NmuCI GTSAC 4 cut(s) 148, 788, 827, 1059
NsiI ATGCAT 1 cut(s) 1057
NspI RCATGY 1 cut(s) 901
PaeR7I CTCGAG 1 cut(s) 1094
PaqCI CACCTGC 1 cut(s) 919
PciSI GCTCTTC 1 cut(s) 606
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PfeI GAWTC 2 cut(s) 344, 588
PflMI CCANNNNNTGG 1 cut(s) 107
PkrI GCNGC 4 cut(s) 11, 532, 685, 1276
PleI GAGTC 2 cut(s) 409, 834
PpsI GAGTC 2 cut(s) 409, 834
Psp124BI GAGCTC 2 cut(s) 618, 628
Psp6I CCWGG 1 cut(s) 1209
PspGI CCWGG 1 cut(s) 1209
PspN4I GGNNCC 3 cut(s) 977, 987, 1122
PspPI GGNCC 2 cut(s) 997, 1121
PsuI RGATCY 2 cut(s) 638, 985
RsaI GTAC 2 cut(s) 284, 865
RsaNI GTAC 2 cut(s) 283, 864
RseI CAYNNNNRTG 1 cut(s) 834
SacI GAGCTC 2 cut(s) 618, 628
SalI GTCGAC 1 cut(s) 507
SapI GCTCTTC 1 cut(s) 606
SaqAI TTAA 3 cut(s) 137, 761, 963
SatI GCNGC 4 cut(s) 10, 531, 684, 1275
Sau3AI GATC 9 cut(s) 466, 490, 638, 667, 750, 764, 796, 947, 985
Sau96I GGNCC 2 cut(s) 997, 1121
SchI GAGTC 2 cut(s) 409, 835
ScrFI CCNGG 2 cut(s) 524, 1211
SduI GDGCHC 3 cut(s) 618, 628, 1324
SfaNI GCATC 3 cut(s) 432, 805, 1042
Sfr274I CTCGAG 1 cut(s) 1094
SinI GGWCC 2 cut(s) 997, 1121
SlaI CTCGAG 1 cut(s) 1094
SmiMI CAYNNNNRTG 1 cut(s) 834
SmlI CTYRAG 6 cut(s) 83, 226, 575, 760, 962, 1094
SmoI CTYRAG 6 cut(s) 83, 226, 575, 760, 962, 1094
SpeI ACTAGT 1 cut(s) 277
Sse9I AATT 5 cut(s) 457, 710, 775, 858, 1254
SsiI CCGC 1 cut(s) 665
SspI AATATT 1 cut(s) 843
SspMI CTAG 6 cut(s) 278, 486, 534, 605, 809, 1350
SstI GAGCTC 2 cut(s) 618, 628
StyD4I CCNGG 2 cut(s) 522, 1209
TaaI ACNGT 3 cut(s) 22, 193, 371
TaiI ACGT 3 cut(s) 185, 727, 879
TaqI TCGA 4 cut(s) 132, 508, 586, 1095
TasI AATT 5 cut(s) 457, 710, 775, 858, 1254
TfiI GAWTC 2 cut(s) 344, 588
Tru1I TTAA 3 cut(s) 137, 761, 963
Tru9I TTAA 3 cut(s) 137, 761, 963
TseFI GTSAC 4 cut(s) 148, 788, 827, 1059
TseI GCWGC 4 cut(s) 9, 530, 683, 1274
Tsp45I GTSAC 4 cut(s) 148, 788, 827, 1059
TspDTI ATGAA 6 cut(s) 83, 135, 693, 852, 872, 916
TspGWI ACGGA 1 cut(s) 1010
Van91I CCANNNNNTGG 1 cut(s) 107
Vha464I CTTAAG 2 cut(s) 760, 962
VpaK11BI GGWCC 2 cut(s) 997, 1121
XagI CCTNNNNNAGG 1 cut(s) 1208
XapI RAATTY 2 cut(s) 775, 1254
XceI RCATGY 1 cut(s) 901
XhoI CTCGAG 1 cut(s) 1094
XmiI GTMKAC 1 cut(s) 508
XspI CTAG 6 cut(s) 278, 486, 534, 605, 809, 1350
ZraI GACGTC 1 cut(s) 877
Zsp2I ATGCAT 1 cut(s) 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.