pycom13g03950
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
2606602 .. 2609255
2654 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g03950.7

Sequence Viewer

Length: 1077 bp
ATGTACCAGCAGCAGAAAGGGACGACGTCGTCTGGAAACGGACACTTTGAGAATTGGGGTGATAATTCAGCCATGGCTGACAACAGCCAGCAGACTGACACTTCGACGGATGTTGACACCGATGACAAAAACCATCTTCATGGAGTGCAGCATGGAGCACTAATGGTAGTGGATTCCACAGAGCAGGCAAAGGAAAGAACTACTGGTGACCAAAAGACACTACGTAGGCTGGCCCAGAACAGAGAAGCAGCAAGGAAGAGTCGACAAAGGAAGAAAGCATATGTCCAGCAGCTGGAAAATAGTCGACTTAGGCTTTCGCAGCTAGAGCAAGAGCTTCAGCGAGCCCGCCAGCAGGGTATATATATTGCAGATGGACTTCCAGGGGATCATGGTCATTCAGTGGCAGGAAATGGGGCCTTAACATTCAACTTGGAGTATGCACGCTGGCTTGAAGAACATCAGCGGCTGATACATGAAATGCGATCAGCTGTGAATTCCCATATGGGAGATAATGAATTGCGGATTCTAGTTGACAGCGTAATGACACATTATGATGAGATATTCAGGTTGAAGAGCATTGCTGCAAAGATTGATGTGTTTCACATGCTCTCTGGCATGTGGAAGACGCCCGCTGAAAGGTGTTTTATGTGGTTGGGTGGATTCCGCTCGTCTGAACTTCTCAAGATACTTGGGAACCACCTCGAACCTTTAACAGACCAGCAGTTGATGGGAATATGCAATCTGCAGCAATCCTCCCAACAGGCTGAAGATGCCTTGTCACAAGGGATGGAAGCTTTGCAACAATCTCTTGTGGAAACACTTTCCTCGCCAAGTCATTGCCCCACTGGTTCTGATAATGTCGCGGACTACATGGGCCAAATGGCAATTGCCATGGGAAAGCTGGCCACACTTGAGAATTTCCTTCACCAGGCTGACCTTTTGAGACAGCAAACTCTGCAACAATTGCATCGGATTCTGACCACTCGCCAAGCAGCTCGCGCCCTTCTTGTCATCAGTGAGCACTTCTCTCGTCTCCGAGCACTCAGTTCTTTATGGCAAGCGCGTCCTAGGGACTAA

Protein Analysis

359

Amino Acids

40.46

Weight (kDa)

6.46

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 28
AatII GACGTC 1 cut(s) 29
AccB7I CCANNNNNTGG 1 cut(s) 292
AccBSI CCGCTC 1 cut(s) 666
AccI GTMKAC 2 cut(s) 262, 304
AccII CGCG 3 cut(s) 863, 999, 1063
AciI CCGC 6 cut(s) 346, 463, 520, 630, 664, 863
AclWI GGATC 1 cut(s) 393
AcoI YGGCCR 1 cut(s) 903
AcsI RAATTY 2 cut(s) 493, 916
AcuI CTGAAG 2 cut(s) 320, 786
AcyI GRCGYC 2 cut(s) 26, 626
AfaI GTAC 1 cut(s) 5
AfiI CCNNNNNNNGG 4 cut(s) 292, 352, 636, 928
AgsI TTSAA 3 cut(s) 427, 452, 571
AjnI CCWGG 2 cut(s) 379, 927
AluBI AGCT 7 cut(s) 292, 322, 334, 488, 794, 901, 995
AluI AGCT 7 cut(s) 292, 322, 334, 488, 794, 901, 995
Alw21I GWGCWC 3 cut(s) 160, 1023, 1042
Alw26I GTCTC 2 cut(s) 937, 1037
AlwI GGATC 1 cut(s) 393
AlwNI CAGNNNCTG 2 cut(s) 292, 466
AoxI GGCC 4 cut(s) 231, 414, 874, 903
ApeKI GCWGC 8 cut(s) 10, 148, 248, 289, 319, 581, 745, 992
ApoI RAATTY 2 cut(s) 493, 916
ArsI GACNNNNNNTTYG 2 cut(s) 85, 117
AspA2I CCTAGG 1 cut(s) 1067
AspLEI GCGC 2 cut(s) 1001, 1063
AspS9I GGNCC 3 cut(s) 232, 414, 874
AsuHPI GGTGA 3 cut(s) 71, 218, 917
AvrII CCTAGG 1 cut(s) 1067
BalI TGGCCA 1 cut(s) 905
BanII GRGCYC 1 cut(s) 346
BbsI GAAGAC 1 cut(s) 629
Bbv12I GWGCWC 3 cut(s) 160, 1023, 1042
BbvI GCAGC 8 cut(s) 22, 160, 260, 301, 331, 568, 757, 1004
BccI CCATC 4 cut(s) 141, 365, 721, 781
BcgI CGANNNNNNTGC 2 cut(s) 1010, 1044
BciT130I CCWGG 2 cut(s) 381, 929
BcoDI GTCTC 2 cut(s) 937, 1037
BfaI CTAG 3 cut(s) 323, 527, 1068
BfmI CTRYAG 1 cut(s) 743
BisI GCNGC 9 cut(s) 11, 149, 249, 290, 320, 464, 582, 746, 993
BlnI CCTAGG 1 cut(s) 1067
BlsI GCNGC 9 cut(s) 12, 150, 250, 291, 321, 465, 583, 747, 994
Bme1390I CCNGG 2 cut(s) 381, 929
BmgT120I GGNCC 3 cut(s) 232, 414, 874
BmiI GGNNCC 2 cut(s) 415, 695
BmrFI CCNGG 2 cut(s) 381, 929
BmsI GCATC 2 cut(s) 760, 976
BpiI GAAGAC 1 cut(s) 629
BplI GAGNNNNNCTC 2 cut(s) 1010, 1042
BpuEI CTTGAG 2 cut(s) 665, 932
BsaAI YACGTR 1 cut(s) 224
BsaHI GRCGYC 2 cut(s) 26, 626
BsaJI CCNNGG 4 cut(s) 72, 380, 891, 1067
Bsc4I CCNNNNNNNGG 4 cut(s) 292, 352, 636, 928
Bse1I ACTGG 2 cut(s) 208, 850
Bse3DI GCAATG 2 cut(s) 576, 835
BseBI CCWGG 2 cut(s) 381, 929
BseDI CCNNGG 4 cut(s) 72, 380, 891, 1067
BseGI GGATG 2 cut(s) 115, 792
BseLI CCNNNNNNNGG 4 cut(s) 292, 352, 636, 928
BseMI GCAATG 2 cut(s) 576, 835
BseMII CTCAG 1 cut(s) 1057
BseNI ACTGG 2 cut(s) 208, 850
BseXI GCAGC 8 cut(s) 22, 160, 260, 301, 331, 568, 757, 1004
BsgI GTGCAG 1 cut(s) 167
Bsh1236I CGCG 3 cut(s) 863, 999, 1063
BshFI GGCC 4 cut(s) 233, 416, 876, 905
BsiHKAI GWGCWC 3 cut(s) 160, 1023, 1042
BslFI GGGAC 1 cut(s) 34
BslI CCNNNNNNNGG 4 cut(s) 292, 352, 636, 928
BsmAI GTCTC 2 cut(s) 937, 1037
BsmBI CGTCTC 1 cut(s) 1037
BsmFI GGGAC 1 cut(s) 34
BsnI GGCC 4 cut(s) 233, 416, 876, 905
Bsp1286I GDGCHC 4 cut(s) 160, 346, 1023, 1042
Bsp143I GATC 2 cut(s) 385, 482
Bsp19I CCATGG 2 cut(s) 72, 891
BspACI CCGC 6 cut(s) 346, 463, 520, 630, 664, 863
BspANI GGCC 4 cut(s) 233, 416, 876, 905
BspCNI CTCAG 1 cut(s) 1056
BspFNI CGCG 3 cut(s) 863, 999, 1063
BspLI GGNNCC 2 cut(s) 415, 695
BspMAI CTGCAG 1 cut(s) 747
BspPI GGATC 1 cut(s) 393
BspQI GCTCTTC 1 cut(s) 566
BsrBI CCGCTC 1 cut(s) 666
BsrDI GCAATG 2 cut(s) 576, 835
BsrI ACTGG 2 cut(s) 208, 850
BssECI CCNNGG 4 cut(s) 72, 380, 891, 1067
BssMI GATC 2 cut(s) 385, 482
BssNI GRCGYC 2 cut(s) 26, 626
BssT1I CCWWGG 3 cut(s) 72, 891, 1067
Bst2UI CCWGG 2 cut(s) 381, 929
Bst6I CTCTTC 2 cut(s) 251, 566
BstACI GRCGYC 2 cut(s) 26, 626
BstAPI GCANNNNNTGC 2 cut(s) 955, 964
BstBAI YACGTR 1 cut(s) 224
BstDEI CTNAG 2 cut(s) 308, 1043
BstDSI CCRYGG 2 cut(s) 72, 891
BstEII GGTNACC 1 cut(s) 206
BstENI CCTNNNNNAGG 1 cut(s) 926
BstF5I GGATG 2 cut(s) 115, 792
BstFNI CGCG 3 cut(s) 863, 999, 1063
BstHHI GCGC 2 cut(s) 1001, 1063
BstKTI GATC 2 cut(s) 388, 485
BstMAI GTCTC 2 cut(s) 937, 1037
BstMBI GATC 2 cut(s) 385, 482
BstMWI GCNNNNNNNGC 6 cut(s) 319, 325, 770, 955, 964, 998
BstNI CCWGG 2 cut(s) 381, 929
BstNSI RCATGY 2 cut(s) 607, 619
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 2 cut(s) 379, 927
BstSFI CTRYAG 1 cut(s) 743
BstSNI TACGTA 1 cut(s) 224
BstUI CGCG 3 cut(s) 863, 999, 1063
BstV1I GCAGC 8 cut(s) 22, 160, 260, 301, 331, 568, 757, 1004
BstV2I GAAGAC 1 cut(s) 629
BstXI CCANNNNNNTGG 1 cut(s) 140
BsuRI GGCC 4 cut(s) 233, 416, 876, 905
BtgI CCRYGG 2 cut(s) 72, 891
BtsCI GGATG 2 cut(s) 115, 792
BtsIMutI CAGTG 3 cut(s) 405, 843, 1021
CaiI CAGNNNCTG 2 cut(s) 292, 466
CfoI GCGC 2 cut(s) 1001, 1063
Cfr13I GGNCC 3 cut(s) 232, 414, 874
CseI GACGC 2 cut(s) 634, 1052
Csp6I GTAC 1 cut(s) 4
CviAII CATG 9 cut(s) 73, 140, 152, 389, 473, 604, 616, 871, 892
CviQI GTAC 1 cut(s) 4
DdeI CTNAG 2 cut(s) 308, 1043
DpnI GATC 2 cut(s) 387, 484
DpnII GATC 2 cut(s) 385, 482
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 903
Eam1104I CTCTTC 2 cut(s) 251, 566
EarI CTCTTC 2 cut(s) 251, 566
Eco105I TACGTA 1 cut(s) 224
Eco130I CCWWGG 3 cut(s) 72, 891, 1067
Eco24I GRGCYC 1 cut(s) 346
Eco57I CTGAAG 2 cut(s) 320, 786
Eco91I GGTNACC 1 cut(s) 206
EcoNI CCTNNNNNAGG 1 cut(s) 926
EcoO109I RGGNCCY 1 cut(s) 414
EcoO65I GGTNACC 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 2 cut(s) 379, 927
EcoT14I CCWWGG 3 cut(s) 72, 891, 1067
EcoT38I GRGCYC 1 cut(s) 346
ErhI CCWWGG 3 cut(s) 72, 891, 1067
Esp3I CGTCTC 1 cut(s) 1037
FaeI CATG 9 cut(s) 76, 143, 155, 392, 476, 607, 619, 874, 895
FaqI GGGAC 1 cut(s) 34
FatI CATG 9 cut(s) 72, 139, 151, 388, 472, 603, 615, 870, 891
FauI CCCGC 2 cut(s) 353, 637
FauNDI CATATG 2 cut(s) 280, 501
FblI GTMKAC 2 cut(s) 262, 304
Fnu4HI GCNGC 9 cut(s) 11, 149, 249, 290, 320, 464, 582, 746, 993
FokI GGATG 2 cut(s) 122, 799
FriOI GRGCYC 1 cut(s) 346
Fsp4HI GCNGC 9 cut(s) 11, 149, 249, 290, 320, 464, 582, 746, 993
FspBI CTAG 3 cut(s) 323, 527, 1068
GlaI GCGC 2 cut(s) 1000, 1062
GluI GCNGC 9 cut(s) 11, 149, 249, 290, 320, 464, 582, 746, 993
HaeIII GGCC 4 cut(s) 233, 416, 876, 905
HgaI GACGC 2 cut(s) 634, 1052
HhaI GCGC 2 cut(s) 1001, 1063
Hin1I GRCGYC 2 cut(s) 26, 626
Hin1II CATG 9 cut(s) 76, 143, 155, 392, 476, 607, 619, 874, 895
Hin6I GCGC 2 cut(s) 999, 1061
HinP1I GCGC 2 cut(s) 999, 1061
HincII GTYRAC 4 cut(s) 115, 263, 305, 532
HindII GTYRAC 4 cut(s) 115, 263, 305, 532
HindIII AAGCTT 1 cut(s) 792
HinfI GANTC 5 cut(s) 173, 259, 523, 660, 973
HphI GGTGA 3 cut(s) 71, 218, 917
Hpy166II GTNNAC 4 cut(s) 115, 263, 305, 532
Hpy188I TCNGA 5 cut(s) 673, 853, 972, 978, 1037
Hpy188III TCNNGA 2 cut(s) 33, 682
Hpy8I GTNNAC 4 cut(s) 115, 263, 305, 532
Hpy99I CGWCG 3 cut(s) 28, 31, 109
HpyAV CCTTC 2 cut(s) 932, 1013
HpyCH4IV ACGT 2 cut(s) 26, 223
HpyCH4V TGCA 9 cut(s) 148, 368, 440, 584, 738, 745, 799, 958, 967
HpyF10VI GCNNNNNNNGC 6 cut(s) 319, 325, 770, 955, 964, 998
HpyF3I CTNAG 2 cut(s) 308, 1043
HpySE526I ACGT 2 cut(s) 26, 223
Hsp92I GRCGYC 2 cut(s) 26, 626
Hsp92II CATG 9 cut(s) 76, 143, 155, 392, 476, 607, 619, 874, 895
HspAI GCGC 2 cut(s) 999, 1061
Kzo9I GATC 2 cut(s) 385, 482
LguI GCTCTTC 1 cut(s) 566
LmnI GCTCC 1 cut(s) 155
Lsp1109I GCAGC 8 cut(s) 22, 160, 260, 301, 331, 568, 757, 1004
LweI GCATC 2 cut(s) 760, 976
MaeI CTAG 3 cut(s) 323, 527, 1068
MaeII ACGT 2 cut(s) 26, 223
MaeIII GTNAC 2 cut(s) 206, 777
MalI GATC 2 cut(s) 387, 484
MbiI CCGCTC 1 cut(s) 666
MboI GATC 2 cut(s) 385, 482
MboII GAAGA 7 cut(s) 128, 268, 283, 464, 583, 634, 779
MfeI CAATTG 2 cut(s) 885, 962
MhlI GDGCHC 4 cut(s) 160, 346, 1023, 1042
MlsI TGGCCA 1 cut(s) 905
MluCI AATT 7 cut(s) 52, 64, 493, 515, 885, 916, 962
MluNI TGGCCA 1 cut(s) 905
MlyI GAGTC 1 cut(s) 268
MnlI CCTC 3 cut(s) 710, 763, 835
Mox20I TGGCCA 1 cut(s) 905
MscI TGGCCA 1 cut(s) 905
MseI TTAA 2 cut(s) 419, 710
MslI CAYNNNNRTG 2 cut(s) 138, 552
Msp20I TGGCCA 1 cut(s) 905
MspA1I CMGCKG 4 cut(s) 292, 463, 488, 632
MspR9I CCNGG 2 cut(s) 381, 929
MunI CAATTG 2 cut(s) 885, 962
MvaI CCWGG 2 cut(s) 381, 929
MvnI CGCG 3 cut(s) 863, 999, 1063
MwoI GCNNNNNNNGC 6 cut(s) 319, 325, 770, 955, 964, 998
NcoI CCATGG 2 cut(s) 72, 891
NdeI CATATG 2 cut(s) 280, 501
NdeII GATC 2 cut(s) 385, 482
NlaIII CATG 9 cut(s) 76, 143, 155, 392, 476, 607, 619, 874, 895
NlaIV GGNNCC 2 cut(s) 415, 695
NmuCI GTSAC 2 cut(s) 206, 777
NspI RCATGY 2 cut(s) 607, 619
PciSI GCTCTTC 1 cut(s) 566
PfeI GAWTC 4 cut(s) 173, 523, 660, 973
PflFI GACNNNGTC 2 cut(s) 25, 28
PflMI CCANNNNNTGG 1 cut(s) 292
PkrI GCNGC 9 cut(s) 12, 150, 250, 291, 321, 465, 583, 747, 994
PleI GAGTC 1 cut(s) 267
PpsI GAGTC 1 cut(s) 267
Ppu21I YACGTR 1 cut(s) 224
Psp6I CCWGG 2 cut(s) 379, 927
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 2 cut(s) 379, 927
PspN4I GGNNCC 2 cut(s) 415, 695
PspPI GGNCC 3 cut(s) 232, 414, 874
PstI CTGCAG 1 cut(s) 747
PstNI CAGNNNCTG 2 cut(s) 292, 466
PsyI GACNNNGTC 2 cut(s) 25, 28
PvuII CAGCTG 2 cut(s) 292, 488
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
RseI CAYNNNNRTG 2 cut(s) 138, 552
SalI GTCGAC 2 cut(s) 261, 303
SapI GCTCTTC 1 cut(s) 566
SaqAI TTAA 2 cut(s) 419, 710
SatI GCNGC 9 cut(s) 11, 149, 249, 290, 320, 464, 582, 746, 993
Sau3AI GATC 2 cut(s) 385, 482
Sau96I GGNCC 3 cut(s) 232, 414, 874
SchI GAGTC 1 cut(s) 268
ScrFI CCNGG 2 cut(s) 381, 929
SduI GDGCHC 4 cut(s) 160, 346, 1023, 1042
SfaNI GCATC 2 cut(s) 760, 976
SfcI CTRYAG 1 cut(s) 743
SmiMI CAYNNNNRTG 2 cut(s) 138, 552
SmlI CTYRAG 2 cut(s) 680, 911
SmoI CTYRAG 2 cut(s) 680, 911
SnaBI TACGTA 1 cut(s) 224
Sse9I AATT 7 cut(s) 52, 64, 493, 515, 885, 916, 962
SsiI CCGC 6 cut(s) 346, 463, 520, 630, 664, 863
SspMI CTAG 3 cut(s) 323, 527, 1068
StyD4I CCNGG 2 cut(s) 379, 927
StyI CCWWGG 3 cut(s) 72, 891, 1067
TaiI ACGT 2 cut(s) 29, 226
TaqI TCGA 4 cut(s) 104, 262, 304, 702
TasI AATT 7 cut(s) 52, 64, 493, 515, 885, 916, 962
TauI GCSGC 1 cut(s) 466
TfiI GAWTC 4 cut(s) 173, 523, 660, 973
Tru1I TTAA 2 cut(s) 419, 710
Tru9I TTAA 2 cut(s) 419, 710
TscAI CASTG 3 cut(s) 405, 850, 1021
TseFI GTSAC 2 cut(s) 206, 777
TseI GCWGC 8 cut(s) 10, 148, 248, 289, 319, 581, 745, 992
Tsp45I GTSAC 2 cut(s) 206, 777
TspDTI ATGAA 3 cut(s) 128, 489, 528
TspGWI ACGGA 2 cut(s) 54, 122
TspRI CASTG 3 cut(s) 405, 850, 1021
Tth111I GACNNNGTC 2 cut(s) 25, 28
Van91I CCANNNNNTGG 1 cut(s) 292
XagI CCTNNNNNAGG 1 cut(s) 926
XapI RAATTY 2 cut(s) 493, 916
XceI RCATGY 2 cut(s) 607, 619
XcmI CCANNNNNNNNNTGG 1 cut(s) 898
XmaJI CCTAGG 1 cut(s) 1067
XmiI GTMKAC 2 cut(s) 262, 304
XspI CTAG 3 cut(s) 323, 527, 1068
ZraI GACGTC 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.