AT1G69200

pfkB family carbohydrate kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
26016024 .. 26018365
2342 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G69200.1

Sequence Viewer

Length: 1845 bp
ATGGCGTCTCTCTCCTTCACCCAATTCTTATCATTCCCCAGATGCAATGCAGATGTTCCTTGTCTGCTCCAGTCGCATGGTTTTGTGAAGTTTAGAGGTGAAAGATGGAATGGGAAACAAAGCTTTTCTATGGCTGCTGGTAGGAGAAAGTTATCAGAGTCAGCACCTCTTGAAGAAGAAGGTAATGATGGAAACGGTGCGGTTGTGGGAAAGAAACCATCTAAAAGTGTTAAGAGAACAACGAAGAAGAAGGTTGTGGTTAAGGATGAACCATTAGAAGAAATTTCTGAATTTTTGGTTGATAATGATGATGTTTTAGACAAGGAAAGCATTGTCTCAGCTTTGAAACCAAAAAAGACAAGAACTAGAAAGAAAGCTGCAGCAGCTTCTTCTGATGTGGAGGAAGTAAAAACCGAGAAGAAAGTGAGACGAAAGAGGACTGTTAAGAAAGATAAAGATGTGGAGGATGATTTAGCTACTATTATGGATGCTGAGGTTAGTGATGTCGAGGAAGCATTGGCTGTTGAAAGCACTGATACAGAGAGTGAAGAAGAAGAGATTGATCTGAGTAAACATGAAGGTGAAGATATTAGTCACACTTATGGATGGCCTCCTCTCGTGTGTTGCTTTGGATCTGCACAACATGCTTTTGTGCCTTCGGGAAGGCCAGCAAACAGGCTATTAGATTATGAACTACACGAACGGATGAGAGATGCAAAGTGGGCTCCAGAGAAGTATATCCGGGCTCCTGGAGGATGTGCAGGAGGTGTTGCTATTGCTCTTGCAAGCTTGGGTGGTAAGGTTGCTTTTATGGGCAAACTTGGGGCTGATGACTATGGTCAAGCCATGTTGTATTATCTGAATGTGTGCAAAGTCCAAACTAGATCAGTTAAGATTGATGGTAAAAGGGTTACGGCGTGTTCTACTATGAAGATCAGCAAGAGAGGTCGCTTGAAATCGACTTGTATTAAGCCATGTGCAGAGGATTCACTTTCAAAATCTGAAATCAACGTTGATGTGCTCAAAGAGGCGAAAATGTTCTACTTCAGCACGCATTCTCTACTCGATAAGAAGATGATGTCAACTACGATACAAGCCATCAAGATATCAAAGCAACTAGGCAATGTCATTTTTTATGACTTGAATCTCCCTTTACCACTATGGCACTCCAGCGAAGAAACCAAGTCTTTCATACAGGAAGTGTGGAATCTTGCAGACGTCATTGAAATCACAAAACAGGAACTTGAATTCTTATGCGGAATCGAGCCTACTGAAGAGTTCGATACAGAAAACAATGACATCAGTAAGTTTGTCCATTACCCGCCAGAAACTGTGGAACAGCTTTGGCATGAAAATCTCAAGGTCTTGTTTGTGACCAATGGCACTTCTAAGATCCATTACTATACCAAAGAGCACAATGGTGCTGTTTCCGGAATGGAGGATGTTCCCATTACTCCTTTTACAAGGGATATGTCAGCATCTGGAGATGGCATCGTTGCAGGTCTAATAAGAATGCTTACGGTTCAGCCAGATCTTATGAACAATAAAGGGTACCTGGAACGCACAGCGAGATATGCAATTGAGTGTGGTATTATTGATCAATGGTTGCTGGCACAAACCCGAGGATATCCTCCAAAGGATGACATGGAAGAAGAAGAAGATGATGAAGAAGAAGATGAAGTGGAATCAGATCCAAACGGTATAAGATCGATAACAGAGAAGGAATACAGAACCTCAAAGCCTTATGATGAACCAGATGGTCCATACGTTATGAAACCAGTAGAGGAAAGGGAGTACAAGAAGTTAGAGCTTGTTGGCTCAATGTTTGAAGATGGTAGTTTATGA

Protein Analysis

614

Amino Acids

68.98

Weight (kDa)

5.14

Isoelectric Point (pI)

47.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 244 - 508 1.3e-27 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011232)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1221
Acc36I ACCTGC 1 cut(s) 1490
Acc65I GGTACC 1 cut(s) 1551
AccB1I GGYRCC 1 cut(s) 1551
AccIII TCCGGA 1 cut(s) 1430
AciI CCGC 3 cut(s) 200, 1257, 1322
AclI AACGTT 1 cut(s) 1011
AclWI GGATC 3 cut(s) 640, 1387, 1685
AcsI RAATTY 3 cut(s) 282, 290, 1247
AcuI CTGAAG 2 cut(s) 1030, 1293
AcyI GRCGYC 2 cut(s) 5, 1218
AfaI GTAC 2 cut(s) 1553, 1796
AgsI TTSAA 9 cut(s) 173, 346, 527, 955, 996, 1144, 1226, 1247, 1829
AjnI CCWGG 2 cut(s) 748, 1554
AleI CACNNNNGTG 1 cut(s) 1419
AluBI AGCT 8 cut(s) 123, 341, 377, 386, 476, 789, 1342, 1810
AluI AGCT 8 cut(s) 123, 341, 377, 386, 476, 789, 1342, 1810
Alw21I GWGCWC 2 cut(s) 1023, 1416
Alw26I GTCTC 3 cut(s) 12, 340, 421
AlwI GGATC 3 cut(s) 640, 1387, 1685
AlwNI CAGNNNCTG 2 cut(s) 1331, 1481
Ama87I CYCGRG 1 cut(s) 1620
Aor13HI TCCGGA 1 cut(s) 1430
AoxI GGCC 2 cut(s) 608, 665
ApeKI GCWGC 4 cut(s) 134, 377, 380, 383
ApoI RAATTY 3 cut(s) 282, 290, 1247
Asp700I GAANNNNTTC 1 cut(s) 1037
Asp718I GGTACC 1 cut(s) 1551
AspS9I GGNCC 1 cut(s) 1760
AsuC2I CCSGG 1 cut(s) 743
AsuHPI GGTGA 3 cut(s) 10, 110, 593
AvaI CYCGRG 1 cut(s) 1620
AvaII GGWCC 1 cut(s) 1760
BanI GGYRCC 1 cut(s) 1551
BanII GRGCYC 2 cut(s) 727, 748
BauI CACGAG 1 cut(s) 617
Bbv12I GWGCWC 2 cut(s) 1023, 1416
BbvCI CCTCAGC 1 cut(s) 492
BbvI GCAGC 4 cut(s) 121, 364, 392, 395
BccI CCATC 9 cut(s) 99, 182, 226, 600, 893, 1106, 1481, 1751, 1826
BceAI ACGGC 1 cut(s) 930
BciT130I CCWGG 2 cut(s) 750, 1556
BclI TGATCA 1 cut(s) 1597
BcnI CCSGG 1 cut(s) 743
BcoDI GTCTC 3 cut(s) 12, 340, 421
BfaI CTAG 3 cut(s) 366, 882, 1118
BfmI CTRYAG 1 cut(s) 378
BfuAI ACCTGC 1 cut(s) 1490
BglII AGATCT 1 cut(s) 1531
BisI GCNGC 4 cut(s) 135, 378, 381, 384
BlsI GCNGC 4 cut(s) 136, 379, 382, 385
Bme1390I CCNGG 3 cut(s) 743, 750, 1556
Bme18I GGWCC 1 cut(s) 1760
BmeT110I CYCGRG 1 cut(s) 1620
BmgT120I GGNCC 1 cut(s) 1760
BmiI GGNNCC 3 cut(s) 726, 747, 1553
BmrFI CCNGG 3 cut(s) 743, 750, 1556
BmsI GCATC 5 cut(s) 32, 478, 703, 1487, 1500
BoxI GACNNNNGTC 1 cut(s) 837
BpmI CTGGAG 5 cut(s) 53, 711, 771, 1153, 1503
Bpu10I CCTNAGC 1 cut(s) 492
BpuEI CTTGAG 1 cut(s) 1343
BpuMI CCSGG 1 cut(s) 743
Bsa29I ATCGAT 1 cut(s) 1709
BsaHI GRCGYC 2 cut(s) 5, 1218
BsaJI CCNNGG 1 cut(s) 1621
BsaWI WCCGGW 1 cut(s) 1430
Bse1I ACTGG 2 cut(s) 70, 1778
Bse3DI GCAATG 2 cut(s) 52, 1129
BseAI TCCGGA 1 cut(s) 1430
BseBI CCWGG 2 cut(s) 750, 1556
BseCI ATCGAT 1 cut(s) 1709
BseDI CCNNGG 1 cut(s) 1621
BseGI GGATG 8 cut(s) 271, 472, 493, 611, 711, 761, 1447, 1645
BseMI GCAATG 2 cut(s) 52, 1129
BseMII CTCAG 3 cut(s) 351, 483, 557
BseNI ACTGG 2 cut(s) 70, 1778
BseRI GAGGAG 1 cut(s) 603
BseXI GCAGC 4 cut(s) 121, 364, 392, 395
BsgI GTGCAG 3 cut(s) 621, 780, 999
BshFI GGCC 2 cut(s) 610, 667
BshNI GGYRCC 1 cut(s) 1551
BshVI ATCGAT 1 cut(s) 1709
BsiHKAI GWGCWC 2 cut(s) 1023, 1416
BsiHKCI CYCGRG 1 cut(s) 1620
BsiSI CCGG 2 cut(s) 742, 1431
BsmAI GTCTC 3 cut(s) 12, 340, 421
BsmBI CGTCTC 2 cut(s) 12, 421
BsmI GAATGC 2 cut(s) 1054, 1518
BsnI GGCC 2 cut(s) 610, 667
BsoBI CYCGRG 1 cut(s) 1620
Bsp1286I GDGCHC 4 cut(s) 727, 748, 1023, 1416
Bsp13I TCCGGA 1 cut(s) 1430
Bsp143I GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
BspACI CCGC 3 cut(s) 200, 1257, 1322
BspANI GGCC 2 cut(s) 610, 667
BspCNI CTCAG 3 cut(s) 350, 484, 558
BspDI ATCGAT 1 cut(s) 1709
BspEI TCCGGA 1 cut(s) 1430
BspLI GGNNCC 3 cut(s) 726, 747, 1553
BspMAI CTGCAG 1 cut(s) 382
BspMI ACCTGC 1 cut(s) 1490
BspPI GGATC 3 cut(s) 640, 1387, 1685
BspT107I GGYRCC 1 cut(s) 1551
BsrDI GCAATG 2 cut(s) 52, 1129
BsrI ACTGG 2 cut(s) 70, 1778
BssECI CCNNGG 1 cut(s) 1621
BssMI GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
BssNI GRCGYC 2 cut(s) 5, 1218
BssSI CACGAG 1 cut(s) 617
Bst2BI CACGAG 1 cut(s) 617
Bst2UI CCWGG 2 cut(s) 750, 1556
Bst4CI ACNGT 5 cut(s) 197, 442, 1333, 1522, 1700
Bst6I CTCTTC 2 cut(s) 549, 1269
BstACI GRCGYC 2 cut(s) 5, 1218
BstAPI GCANNNNNTGC 1 cut(s) 644
BstC8I GCNNGC 4 cut(s) 669, 787, 1052, 1611
BstDEI CTNAG 4 cut(s) 337, 492, 566, 1389
BstF5I GGATG 8 cut(s) 271, 472, 493, 611, 711, 761, 1447, 1645
BstKTI GATC 9 cut(s) 565, 635, 887, 936, 1395, 1534, 1600, 1693, 1709
BstMAI GTCTC 3 cut(s) 12, 340, 421
BstMBI GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
BstMWI GCNNNNNNNGC 5 cut(s) 73, 383, 644, 722, 1574
BstNI CCWGG 2 cut(s) 750, 1556
BstNSI RCATGY 1 cut(s) 647
BstPAI GACNNNNGTC 1 cut(s) 837
BstSCI CCNGG 3 cut(s) 741, 748, 1554
BstSFI CTRYAG 1 cut(s) 378
BstV1I GCAGC 4 cut(s) 121, 364, 392, 395
BstX2I RGATCY 4 cut(s) 632, 1392, 1531, 1690
BstXI CCANNNNNNTGG 1 cut(s) 77
BstYI RGATCY 4 cut(s) 632, 1392, 1531, 1690
Bsu15I ATCGAT 1 cut(s) 1709
BsuRI GGCC 2 cut(s) 610, 667
BsuTUI ATCGAT 1 cut(s) 1709
BtsCI GGATG 8 cut(s) 271, 472, 493, 611, 711, 761, 1447, 1645
BtsIMutI CAGTG 1 cut(s) 531
BveI ACCTGC 1 cut(s) 1490
Cac8I GCNNGC 4 cut(s) 669, 787, 1052, 1611
CaiI CAGNNNCTG 2 cut(s) 1331, 1481
Cfr13I GGNCC 1 cut(s) 1760
ClaI ATCGAT 1 cut(s) 1709
Csp6I GTAC 2 cut(s) 1552, 1795
CviAII CATG 7 cut(s) 77, 575, 644, 847, 975, 1349, 1645
CviQI GTAC 2 cut(s) 1552, 1795
DdeI CTNAG 4 cut(s) 337, 492, 566, 1389
DpnI GATC 9 cut(s) 564, 634, 886, 935, 1394, 1533, 1599, 1692, 1708
DpnII GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
Eam1104I CTCTTC 2 cut(s) 549, 1269
EarI CTCTTC 2 cut(s) 549, 1269
Eco24I GRGCYC 2 cut(s) 727, 748
Eco32I GATATC 2 cut(s) 1107, 1628
Eco47I GGWCC 1 cut(s) 1760
Eco57I CTGAAG 2 cut(s) 1030, 1293
Eco88I CYCGRG 1 cut(s) 1620
EcoRI GAATTC 1 cut(s) 1247
EcoRII CCWGG 2 cut(s) 748, 1554
EcoRV GATATC 2 cut(s) 1107, 1628
EcoT38I GRGCYC 2 cut(s) 727, 748
Esp3I CGTCTC 2 cut(s) 12, 421
FaeI CATG 7 cut(s) 80, 578, 647, 850, 978, 1352, 1648
FatI CATG 7 cut(s) 76, 574, 643, 846, 974, 1348, 1644
FauI CCCGC 1 cut(s) 1329
FbaI TGATCA 1 cut(s) 1597
Fnu4HI GCNGC 4 cut(s) 135, 378, 381, 384
FokI GGATG 8 cut(s) 278, 479, 500, 618, 718, 768, 1454, 1652
FriOI GRGCYC 2 cut(s) 727, 748
Fsp4HI GCNGC 4 cut(s) 135, 378, 381, 384
FspBI CTAG 3 cut(s) 366, 882, 1118
GluI GCNGC 4 cut(s) 135, 378, 381, 384
GsuI CTGGAG 5 cut(s) 53, 711, 771, 1153, 1503
HaeIII GGCC 2 cut(s) 610, 667
HapII CCGG 2 cut(s) 742, 1431
Hin1I GRCGYC 2 cut(s) 5, 1218
Hin1II CATG 7 cut(s) 80, 578, 647, 850, 978, 1352, 1648
HincII GTYRAC 1 cut(s) 1083
HindII GTYRAC 1 cut(s) 1083
HindIII AAGCTT 2 cut(s) 121, 787
HinfI GANTC 6 cut(s) 158, 986, 1144, 1207, 1260, 1685
HpaII CCGG 2 cut(s) 742, 1431
HphI GGTGA 3 cut(s) 10, 110, 593
Hpy166II GTNNAC 2 cut(s) 572, 1083
Hpy188I TCNGA 7 cut(s) 157, 289, 394, 567, 861, 1003, 1690
Hpy188III TCNNGA 6 cut(s) 170, 660, 728, 1102, 1431, 1482
Hpy8I GTNNAC 2 cut(s) 572, 1083
HpyAV CCTTC 7 cut(s) 25, 173, 244, 572, 657, 666, 1714
HpyCH4III ACNGT 5 cut(s) 197, 442, 1333, 1522, 1700
HpyCH4IV ACGT 3 cut(s) 1011, 1218, 1767
HpyF10VI GCNNNNNNNGC 5 cut(s) 73, 383, 644, 722, 1574
HpyF3I CTNAG 4 cut(s) 337, 492, 566, 1389
HpySE526I ACGT 3 cut(s) 1011, 1218, 1767
Hsp92I GRCGYC 2 cut(s) 5, 1218
Hsp92II CATG 7 cut(s) 80, 578, 647, 850, 978, 1352, 1648
Kpn2I TCCGGA 1 cut(s) 1430
KpnI GGTACC 1 cut(s) 1555
Ksp22I TGATCA 1 cut(s) 1597
Kzo9I GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
LmnI GCTCC 3 cut(s) 72, 730, 751
Lsp1109I GCAGC 4 cut(s) 121, 364, 392, 395
LweI GCATC 5 cut(s) 32, 478, 703, 1487, 1500
MaeI CTAG 3 cut(s) 366, 882, 1118
MaeII ACGT 3 cut(s) 1011, 1218, 1767
MaeIII GTNAC 3 cut(s) 593, 910, 1372
MalI GATC 9 cut(s) 564, 634, 886, 935, 1394, 1533, 1599, 1692, 1708
MboI GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
MfeI CAATTG 1 cut(s) 1578
MflI RGATCY 4 cut(s) 632, 1392, 1531, 1690
MhlI GDGCHC 4 cut(s) 727, 748, 1023, 1416
MluCI AATT 5 cut(s) 23, 282, 290, 1247, 1578
MlyI GAGTC 1 cut(s) 167
MroI TCCGGA 1 cut(s) 1430
MroXI GAANNNNTTC 1 cut(s) 1037
MseI TTAA 5 cut(s) 231, 261, 444, 891, 969
MslI CAYNNNNRTG 3 cut(s) 579, 600, 1419
MspI CCGG 2 cut(s) 742, 1431
MspR9I CCNGG 3 cut(s) 743, 750, 1556
MunI CAATTG 1 cut(s) 1578
Mva1269I GAATGC 2 cut(s) 1054, 1518
MvaI CCWGG 2 cut(s) 750, 1556
MwoI GCNNNNNNNGC 5 cut(s) 73, 383, 644, 722, 1574
NciI CCSGG 1 cut(s) 743
NdeII GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
NlaIII CATG 7 cut(s) 80, 578, 647, 850, 978, 1352, 1648
NlaIV GGNNCC 3 cut(s) 726, 747, 1553
NmuCI GTSAC 2 cut(s) 593, 1372
NspI RCATGY 1 cut(s) 647
OliI CACNNNNGTG 1 cut(s) 1419
PctI GAATGC 2 cut(s) 1054, 1518
PdmI GAANNNNTTC 1 cut(s) 1037
PfeI GAWTC 5 cut(s) 986, 1144, 1207, 1260, 1685
PfoI TCCNGGA 1 cut(s) 748
PkrI GCNGC 4 cut(s) 136, 379, 382, 385
PleI GAGTC 1 cut(s) 166
PpsI GAGTC 1 cut(s) 166
PshAI GACNNNNGTC 1 cut(s) 837
Psp1406I AACGTT 1 cut(s) 1011
Psp6I CCWGG 2 cut(s) 748, 1554
PspGI CCWGG 2 cut(s) 748, 1554
PspN4I GGNNCC 3 cut(s) 726, 747, 1553
PspPI GGNCC 1 cut(s) 1760
PstI CTGCAG 1 cut(s) 382
PstNI CAGNNNCTG 2 cut(s) 1331, 1481
PsuI RGATCY 4 cut(s) 632, 1392, 1531, 1690
RsaI GTAC 2 cut(s) 1553, 1796
RsaNI GTAC 2 cut(s) 1552, 1795
RseI CAYNNNNRTG 3 cut(s) 579, 600, 1419
SaqAI TTAA 5 cut(s) 231, 261, 444, 891, 969
SatI GCNGC 4 cut(s) 135, 378, 381, 384
Sau3AI GATC 9 cut(s) 562, 632, 884, 933, 1392, 1531, 1597, 1690, 1706
Sau96I GGNCC 1 cut(s) 1760
SchI GAGTC 1 cut(s) 167
ScrFI CCNGG 3 cut(s) 743, 750, 1556
SduI GDGCHC 4 cut(s) 727, 748, 1023, 1416
SfaNI GCATC 5 cut(s) 32, 478, 703, 1487, 1500
SfcI CTRYAG 1 cut(s) 378
SinI GGWCC 1 cut(s) 1760
SmiMI CAYNNNNRTG 3 cut(s) 579, 600, 1419
SmlI CTYRAG 1 cut(s) 1358
SmoI CTYRAG 1 cut(s) 1358
Sse9I AATT 5 cut(s) 23, 282, 290, 1247, 1578
SsiI CCGC 3 cut(s) 200, 1257, 1322
SspMI CTAG 3 cut(s) 366, 882, 1118
StyD4I CCNGG 3 cut(s) 741, 748, 1554
TaaI ACNGT 5 cut(s) 197, 442, 1333, 1522, 1700
TaiI ACGT 3 cut(s) 1014, 1221, 1770
TaqI TCGA 6 cut(s) 507, 959, 1065, 1263, 1281, 1709
TasI AATT 5 cut(s) 23, 282, 290, 1247, 1578
TatI WGTACW 1 cut(s) 1794
TfiI GAWTC 5 cut(s) 986, 1144, 1207, 1260, 1685
Tru1I TTAA 5 cut(s) 231, 261, 444, 891, 969
Tru9I TTAA 5 cut(s) 231, 261, 444, 891, 969
TscAI CASTG 1 cut(s) 538
TseFI GTSAC 2 cut(s) 593, 1372
TseI GCWGC 4 cut(s) 134, 377, 380, 383
Tsp45I GTSAC 2 cut(s) 593, 1372
TspGWI ACGGA 1 cut(s) 718
TspRI CASTG 1 cut(s) 538
VpaK11BI GGWCC 1 cut(s) 1760
XapI RAATTY 3 cut(s) 282, 290, 1247
XceI RCATGY 1 cut(s) 647
XmnI GAANNNNTTC 1 cut(s) 1037
XspI CTAG 3 cut(s) 366, 882, 1118
ZraI GACGTC 1 cut(s) 1219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.