Prupe.1G289300_v2.0.a1

pfkB family carbohydrate kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
28848707 .. 28852109
3403 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G289300.1

Sequence Viewer

Length: 1668 bp
ATGGCATCTCTTTCTTTCACTCACTTTCTCCTCTTACCCAGGTGCCATTTGGATTGGCCCAATAGCCCGTCACTGAACTTTGTGCAGCTTCAGGGTCTTAGATTACATAGTAAAAAGCGGGGCCTTGCTGCTGTCCCTAAAAAGATTAACTCAGAGAACTCAGCTGTAGAGGCATCCAATGAAGATGAGGTTGTTGTGAAGAAAAACACATCTAGGACTCCCAAACGAACTCGAAAGAAAACAATAGCCGAAACAGATGCTTCAAGTGAGGAAAGCATCATTTCTGCATCTAGTGAAGATACCAAGAAACCGCGTGGAAGAACTCGTAGGAAAGCGGCATCTGCGTCTACAAGCACGGAGGAAGAACAAACTGAGAAGAAGGTACGGAGGAGAAAAACTAAGAAGAAAGATGATGTTGAGGAGCAGGTTAGTGAAGCTGAACTTAGTGAGCCTGAGGAGTTTACATTCACTGTGGATATGAAGGATGAGAATACGGAAGACATAGAATTGGAAATAGATGAGGGAGAGGATATTAGCTATACTTATGATTGGCCTCCTCTTGTTTGTTGCTTTGGGGCTGCACAACATGCTTTTGTGCCCTCAGGAAGGCCAGCCAACAGACTTATAGATTATGAAATACATGAAAGAAAGAAAGATGCATTATGGGCTCCTGAAAAATTTATTAGGTCTCCTGGGGGATCTGCAGGCAGTGTTGCAATTGCTCTTGCAAGCTTGGGTGGCAAGGTTGCTTTCATGGGAAAACTTGGGGATGATGAATATGGTCAGGCCATGCTATATTATATGAATGTCAACAATGTTCAAACTCGTTCTGTTCGCATTGATAGTAAAAGGGCAACTGCAGTATCACAGATGAAGATCGGTAAAAGGGCTCGCTTGAGATTGACTTGTGTCAAACCCTGTGCTGAGGATTCTTTATCAAAGTCGGAGATCAACATTGATGTGCTGAAGGAGGCAAAGATGTTTTACTTCAGCACGCATTCTATGCTTGATCAAAATATGAGATCAACTACACTGCAAGCAATCAAGATTTCGAAGAAATTAGGAGGAGTTATTTTCTATGATGTAAACCTTCCATTACCACTATGGCATTCTTGCGAAGAAACAAAGTTGTTCATACAGCAAGTGTGGAACCTTGCTGATATTATTGAGGTTACCAAGCAAGAGCTTGAGTTTATTTGTGGGATCCAGCCCTCTGAGGAATTTGACACCAAAAATAATGACAGATCAAAATTTGTCCATCATACACCAGAAGTGGTTGCACCGGTTTGGCATGAAAATCTTAAGGTTTTGTTTGTGACAAATGGGACTTCTAAGATTCACTACTACACAAAGGAGCACCATGGTGCTATTAATGGGATGGAGGATCCTCCTATTACTCCTTTCACGTCTGATATGTCAGCATCTGGAGATGGCATTGTGGCGGCTCTCATGAGAATGTTGACAGTTCAACCACATCTTATTACTGATAAAGAATATTTGGAGCACACAATCAAGTATGCAATTGATTGTGGGGTCATTGATCAATGGTTGCTCGGGCGAGAACGCGGCTTCCCTCCTAAAGAGGATACGGAAGAAGTGGTTCCTGATCCAGATGGTATAAGGTCTCTAACAGAAATGGAATATCGCACACTAGAGAGTGTAAGTTGA

Protein Analysis

556

Amino Acids

62.61

Weight (kDa)

5.85

Isoelectric Point (pI)

50.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011232)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 415
AccB1I GGYRCC 1 cut(s) 42
AccI GTMKAC 1 cut(s) 347
AccII CGCG 2 cut(s) 313, 1566
AciI CCGC 5 cut(s) 118, 311, 335, 1442, 1566
AclWI GGATC 6 cut(s) 706, 1198, 1211, 1379, 1392, 1601
AcsI RAATTY 3 cut(s) 677, 1220, 1250
AcuI CTGAAG 3 cut(s) 74, 973, 986
AfaI GTAC 1 cut(s) 384
AfiI CCNNNNNNNGG 1 cut(s) 606
AflII CTTAAG 1 cut(s) 1301
AgeI ACCGGT 1 cut(s) 1282
AgsI TTSAA 3 cut(s) 264, 821, 1469
AjiI CACGTC 1 cut(s) 1407
AjnI CCWGG 2 cut(s) 38, 691
AleI CACNNNNGTG 1 cut(s) 1362
AloI GAACNNNNNNTCC 2 cut(s) 1554, 1586
AluBI AGCT 6 cut(s) 88, 164, 437, 537, 732, 1186
AluI AGCT 6 cut(s) 88, 164, 437, 537, 732, 1186
Alw21I GWGCWC 2 cut(s) 1359, 1506
Alw26I GTCTC 2 cut(s) 693, 1629
AlwI GGATC 6 cut(s) 706, 1198, 1211, 1379, 1392, 1601
AlwNI CAGNNNCTG 1 cut(s) 1424
Ama87I CYCGRG 1 cut(s) 1553
AoxI GGCC 5 cut(s) 56, 121, 551, 608, 786
ApeKI GCWGC 3 cut(s) 85, 128, 578
ApoI RAATTY 3 cut(s) 677, 1220, 1250
AseI ATTAAT 1 cut(s) 1371
AsiGI ACCGGT 1 cut(s) 1282
Asp700I GAANNNNTTC 1 cut(s) 1599
AspS9I GGNCC 2 cut(s) 57, 121
AsuII TTCGAA 1 cut(s) 1052
AvaI CYCGRG 1 cut(s) 1553
AxyI CCTNAGG 2 cut(s) 453, 601
BaeGI GKGCMC 1 cut(s) 600
BaeI ACNNNNGTAYC 2 cut(s) 846, 879
BamHI GGATCC 2 cut(s) 1203, 1384
BanI GGYRCC 1 cut(s) 42
BanII GRGCYC 2 cut(s) 670, 892
BbsI GAAGAC 1 cut(s) 504
Bbv12I GWGCWC 2 cut(s) 1359, 1506
BbvCI CCTCAGC 1 cut(s) 924
BbvI GCAGC 3 cut(s) 97, 115, 565
BccI CCATC 4 cut(s) 1266, 1372, 1424, 1607
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BciT130I CCWGG 2 cut(s) 40, 693
BciVI GTATCC 1 cut(s) 1579
BclI TGATCA 2 cut(s) 1009, 1540
BcoDI GTCTC 2 cut(s) 693, 1629
BfaI CTAG 3 cut(s) 213, 291, 1652
BfmI CTRYAG 3 cut(s) 165, 702, 858
BfrI CTTAAG 1 cut(s) 1301
BfuAI ACCTGC 1 cut(s) 415
BfuI GTATCC 1 cut(s) 1579
BisI GCNGC 6 cut(s) 86, 129, 336, 579, 1443, 1567
BlsI GCNGC 6 cut(s) 87, 130, 337, 580, 1444, 1568
Bme1390I CCNGG 2 cut(s) 40, 693
BmeT110I CYCGRG 1 cut(s) 1553
BmgBI CACGTC 1 cut(s) 1407
BmgT120I GGNCC 2 cut(s) 57, 121
BmiI GGNNCC 7 cut(s) 44, 122, 669, 1151, 1205, 1386, 1602
BmrFI CCNGG 2 cut(s) 40, 693
BmsI GCATC 8 cut(s) 14, 182, 247, 285, 296, 347, 646, 1430
BoxI GACNNNNGTC 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 504
BpmI CTGGAG 1 cut(s) 1446
Bpu10I CCTNAGC 1 cut(s) 924
Bpu14I TTCGAA 1 cut(s) 1052
BpuEI CTTGAG 2 cut(s) 916, 1208
BsaBI GATNNNNATC 1 cut(s) 875
BsaI GGTCTC 2 cut(s) 693, 1629
BsaJI CCNNGG 3 cut(s) 38, 692, 1360
BsaWI WCCGGW 1 cut(s) 1282
Bsc4I CCNNNNNNNGG 1 cut(s) 606
Bse118I RCCGGY 1 cut(s) 1282
Bse21I CCTNAGG 2 cut(s) 453, 601
Bse8I GATNNNNATC 1 cut(s) 875
BseBI CCWGG 2 cut(s) 40, 693
BseDI CCNNGG 3 cut(s) 38, 692, 1360
BseGI GGATG 4 cut(s) 173, 490, 775, 1383
BseJI GATNNNNATC 1 cut(s) 875
BseLI CCNNNNNNNGG 1 cut(s) 606
BseMII CTCAG 7 cut(s) 165, 174, 363, 444, 615, 915, 1206
BseRI GAGGAG 6 cut(s) 20, 403, 434, 470, 546, 1080
BseSI GKGCMC 1 cut(s) 600
BseXI GCAGC 3 cut(s) 97, 115, 565
BsgI GTGCAG 2 cut(s) 104, 564
Bsh1236I CGCG 2 cut(s) 313, 1566
BshFI GGCC 5 cut(s) 58, 123, 553, 610, 788
BshNI GGYRCC 1 cut(s) 42
BshTI ACCGGT 1 cut(s) 1282
BsiHKAI GWGCWC 2 cut(s) 1359, 1506
BsiHKCI CYCGRG 1 cut(s) 1553
BsiSI CCGG 1 cut(s) 1283
BslFI GGGAC 2 cut(s) 119, 1339
BslI CCNNNNNNNGG 1 cut(s) 606
BsmAI GTCTC 2 cut(s) 693, 1629
BsmFI GGGAC 2 cut(s) 119, 1339
BsmI GAATGC 2 cut(s) 997, 1108
BsnI GGCC 5 cut(s) 58, 123, 553, 610, 788
Bso31I GGTCTC 2 cut(s) 693, 1629
BsoBI CYCGRG 1 cut(s) 1553
Bsp119I TTCGAA 1 cut(s) 1052
Bsp1286I GDGCHC 5 cut(s) 600, 670, 892, 1359, 1506
Bsp19I CCATGG 1 cut(s) 1360
BspACI CCGC 5 cut(s) 118, 311, 335, 1442, 1566
BspANI GGCC 5 cut(s) 58, 123, 553, 610, 788
BspCNI CTCAG 7 cut(s) 164, 173, 364, 445, 614, 916, 1207
BspFNI CGCG 2 cut(s) 313, 1566
BspHI TCATGA 1 cut(s) 1449
BspLI GGNNCC 7 cut(s) 44, 122, 669, 1151, 1205, 1386, 1602
BspMAI CTGCAG 2 cut(s) 706, 862
BspMI ACCTGC 1 cut(s) 415
BspPI GGATC 6 cut(s) 706, 1198, 1211, 1379, 1392, 1601
BspT104I TTCGAA 1 cut(s) 1052
BspT107I GGYRCC 1 cut(s) 42
BspTI CTTAAG 1 cut(s) 1301
BspTNI GGTCTC 2 cut(s) 693, 1629
BsrFI RCCGGY 1 cut(s) 1282
BssAI RCCGGY 1 cut(s) 1282
BssECI CCNNGG 3 cut(s) 38, 692, 1360
BssT1I CCWWGG 1 cut(s) 1360
Bst2UI CCWGG 2 cut(s) 40, 693
Bst4CI ACNGT 2 cut(s) 472, 1465
BstAFI CTTAAG 1 cut(s) 1301
BstAPI GCANNNNNTGC 2 cut(s) 587, 1003
BstBI TTCGAA 1 cut(s) 1052
BstC8I GCNNGC 6 cut(s) 612, 706, 730, 892, 995, 1038
BstDSI CCRYGG 1 cut(s) 1360
BstEII GGTNACC 1 cut(s) 1171
BstENI CCTNNNNNAGG 1 cut(s) 604
BstF5I GGATG 4 cut(s) 173, 490, 775, 1383
BstFNI CGCG 2 cut(s) 313, 1566
BstMAI GTCTC 2 cut(s) 693, 1629
BstMWI GCNNNNNNNGC 6 cut(s) 170, 341, 587, 665, 738, 1003
BstNI CCWGG 2 cut(s) 40, 693
BstNSI RCATGY 1 cut(s) 590
BstPAI GACNNNNGTC 1 cut(s) 908
BstPI GGTNACC 1 cut(s) 1171
BstSCI CCNGG 2 cut(s) 38, 691
BstSFI CTRYAG 3 cut(s) 165, 702, 858
BstSLI GKGCMC 1 cut(s) 600
BstUI CGCG 2 cut(s) 313, 1566
BstV1I GCAGC 3 cut(s) 97, 115, 565
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 3 cut(s) 698, 1203, 1384
BstYI RGATCY 3 cut(s) 698, 1203, 1384
Bsu36I CCTNAGG 2 cut(s) 453, 601
BsuI GTATCC 1 cut(s) 1579
BsuRI GGCC 5 cut(s) 58, 123, 553, 610, 788
BtgI CCRYGG 1 cut(s) 1360
BtrI CACGTC 1 cut(s) 1407
BtsCI GGATG 4 cut(s) 173, 490, 775, 1383
BtsI GCAGTG 2 cut(s) 715, 1031
BtsIMutI CAGTG 4 cut(s) 71, 468, 715, 1031
BveI ACCTGC 1 cut(s) 415
Cac8I GCNNGC 6 cut(s) 612, 706, 730, 892, 995, 1038
CaiI CAGNNNCTG 1 cut(s) 1424
CciI TCATGA 1 cut(s) 1449
Cfr10I RCCGGY 1 cut(s) 1282
Cfr13I GGNCC 2 cut(s) 57, 121
CseI GACGC 1 cut(s) 333
Csp6I GTAC 1 cut(s) 383
CspAI ACCGGT 1 cut(s) 1282
CviAII CATG 7 cut(s) 587, 641, 754, 790, 1292, 1361, 1450
CviQI GTAC 1 cut(s) 383
Eco130I CCWWGG 1 cut(s) 1360
Eco24I GRGCYC 2 cut(s) 670, 892
Eco31I GGTCTC 2 cut(s) 693, 1629
Eco57I CTGAAG 3 cut(s) 74, 973, 986
Eco81I CCTNAGG 2 cut(s) 453, 601
Eco88I CYCGRG 1 cut(s) 1553
Eco91I GGTNACC 1 cut(s) 1171
EcoNI CCTNNNNNAGG 1 cut(s) 604
EcoO109I RGGNCCY 1 cut(s) 121
EcoO65I GGTNACC 1 cut(s) 1171
EcoRII CCWGG 2 cut(s) 38, 691
EcoT14I CCWWGG 1 cut(s) 1360
EcoT22I ATGCAT 1 cut(s) 661
EcoT38I GRGCYC 2 cut(s) 670, 892
ErhI CCWWGG 1 cut(s) 1360
FaeI CATG 7 cut(s) 590, 644, 757, 793, 1295, 1364, 1453
FalI AAGNNNNNCTT 2 cut(s) 426, 458
FaqI GGGAC 2 cut(s) 119, 1339
FatI CATG 7 cut(s) 586, 640, 753, 789, 1291, 1360, 1449
FauI CCCGC 1 cut(s) 111
FbaI TGATCA 2 cut(s) 1009, 1540
FblI GTMKAC 1 cut(s) 347
Fnu4HI GCNGC 6 cut(s) 86, 129, 336, 579, 1443, 1567
FokI GGATG 4 cut(s) 160, 497, 782, 1390
FriOI GRGCYC 2 cut(s) 670, 892
Fsp4HI GCNGC 6 cut(s) 86, 129, 336, 579, 1443, 1567
FspBI CTAG 3 cut(s) 213, 291, 1652
GluI GCNGC 6 cut(s) 86, 129, 336, 579, 1443, 1567
GsuI CTGGAG 1 cut(s) 1446
HaeIII GGCC 5 cut(s) 58, 123, 553, 610, 788
HapII CCGG 1 cut(s) 1283
HgaI GACGC 1 cut(s) 333
Hin1II CATG 7 cut(s) 590, 644, 757, 793, 1295, 1364, 1453
HincII GTYRAC 2 cut(s) 811, 1461
HindII GTYRAC 2 cut(s) 811, 1461
HindIII AAGCTT 1 cut(s) 730
HinfI GANTC 3 cut(s) 217, 929, 1336
HpaII CCGG 1 cut(s) 1283
Hpy166II GTNNAC 5 cut(s) 348, 462, 811, 1087, 1461
Hpy188I TCNGA 4 cut(s) 154, 946, 1216, 1411
Hpy188III TCNNGA 7 cut(s) 603, 671, 1045, 1425, 1450, 1604, 1610
Hpy8I GTNNAC 5 cut(s) 348, 462, 811, 1087, 1461
HpyAV CCTTC 5 cut(s) 373, 475, 600, 961, 1100
HpyCH4III ACNGT 2 cut(s) 472, 1465
HpyCH4IV ACGT 1 cut(s) 1406
HpyF10VI GCNNNNNNNGC 6 cut(s) 170, 341, 587, 665, 738, 1003
HpySE526I ACGT 1 cut(s) 1406
Hsp92II CATG 7 cut(s) 590, 644, 757, 793, 1295, 1364, 1453
Ksp22I TGATCA 2 cut(s) 1009, 1540
LmnI GCTCC 4 cut(s) 421, 673, 1354, 1501
Lsp1109I GCAGC 3 cut(s) 97, 115, 565
LweI GCATC 8 cut(s) 14, 182, 247, 285, 296, 347, 646, 1430
MaeI CTAG 3 cut(s) 213, 291, 1652
MaeII ACGT 1 cut(s) 1406
MaeIII GTNAC 3 cut(s) 69, 1171, 1315
MfeI CAATTG 2 cut(s) 717, 1521
MflI RGATCY 3 cut(s) 698, 1203, 1384
MhlI GDGCHC 5 cut(s) 600, 670, 892, 1359, 1506
MluCI AATT 7 cut(s) 506, 677, 717, 1058, 1220, 1250, 1521
MlyI GAGTC 1 cut(s) 211
MmeI TCCRAC 1 cut(s) 924
Mph1103I ATGCAT 1 cut(s) 661
MroXI GAANNNNTTC 1 cut(s) 1599
MseI TTAA 3 cut(s) 147, 1302, 1371
MslI CAYNNNNRTG 3 cut(s) 959, 1362, 1454
MspA1I CMGCKG 1 cut(s) 164
MspCI CTTAAG 1 cut(s) 1301
MspI CCGG 1 cut(s) 1283
MspR9I CCNGG 2 cut(s) 40, 693
MunI CAATTG 2 cut(s) 717, 1521
Mva1269I GAATGC 2 cut(s) 997, 1108
MvaI CCWGG 2 cut(s) 40, 693
MvnI CGCG 2 cut(s) 313, 1566
MwoI GCNNNNNNNGC 6 cut(s) 170, 341, 587, 665, 738, 1003
NcoI CCATGG 1 cut(s) 1360
NlaIII CATG 7 cut(s) 590, 644, 757, 793, 1295, 1364, 1453
NlaIV GGNNCC 7 cut(s) 44, 122, 669, 1151, 1205, 1386, 1602
NmuCI GTSAC 2 cut(s) 69, 1315
NsiI ATGCAT 1 cut(s) 661
NspI RCATGY 1 cut(s) 590
NspV TTCGAA 1 cut(s) 1052
OliI CACNNNNGTG 1 cut(s) 1362
PagI TCATGA 1 cut(s) 1449
PctI GAATGC 2 cut(s) 997, 1108
PdmI GAANNNNTTC 1 cut(s) 1599
PfeI GAWTC 2 cut(s) 929, 1336
PinAI ACCGGT 1 cut(s) 1282
PkrI GCNGC 6 cut(s) 87, 130, 337, 580, 1444, 1568
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
PshAI GACNNNNGTC 1 cut(s) 908
PshBI ATTAAT 1 cut(s) 1371
Psp6I CCWGG 2 cut(s) 38, 691
PspEI GGTNACC 1 cut(s) 1171
PspGI CCWGG 2 cut(s) 38, 691
PspN4I GGNNCC 7 cut(s) 44, 122, 669, 1151, 1205, 1386, 1602
PspPI GGNCC 2 cut(s) 57, 121
PstI CTGCAG 2 cut(s) 706, 862
PstNI CAGNNNCTG 1 cut(s) 1424
PsuI RGATCY 3 cut(s) 698, 1203, 1384
PvuII CAGCTG 1 cut(s) 164
RsaI GTAC 1 cut(s) 384
RsaNI GTAC 1 cut(s) 383
RseI CAYNNNNRTG 3 cut(s) 959, 1362, 1454
SaqAI TTAA 3 cut(s) 147, 1302, 1371
SatI GCNGC 6 cut(s) 86, 129, 336, 579, 1443, 1567
Sau96I GGNCC 2 cut(s) 57, 121
SchI GAGTC 1 cut(s) 211
ScrFI CCNGG 2 cut(s) 40, 693
SduI GDGCHC 5 cut(s) 600, 670, 892, 1359, 1506
SfaNI GCATC 8 cut(s) 14, 182, 247, 285, 296, 347, 646, 1430
SfcI CTRYAG 3 cut(s) 165, 702, 858
SfuI TTCGAA 1 cut(s) 1052
SmiMI CAYNNNNRTG 3 cut(s) 959, 1362, 1454
SmlI CTYRAG 3 cut(s) 895, 1187, 1301
SmoI CTYRAG 3 cut(s) 895, 1187, 1301
Sse9I AATT 7 cut(s) 506, 677, 717, 1058, 1220, 1250, 1521
SsiI CCGC 5 cut(s) 118, 311, 335, 1442, 1566
SspI AATATT 1 cut(s) 1496
SspMI CTAG 3 cut(s) 213, 291, 1652
StyD4I CCNGG 2 cut(s) 38, 691
StyI CCWWGG 1 cut(s) 1360
TaaI ACNGT 2 cut(s) 472, 1465
TaiI ACGT 1 cut(s) 1409
TaqI TCGA 2 cut(s) 232, 1052
TasI AATT 7 cut(s) 506, 677, 717, 1058, 1220, 1250, 1521
TauI GCSGC 3 cut(s) 338, 1445, 1569
TfiI GAWTC 2 cut(s) 929, 1336
Tru1I TTAA 3 cut(s) 147, 1302, 1371
Tru9I TTAA 3 cut(s) 147, 1302, 1371
TscAI CASTG 4 cut(s) 78, 475, 715, 1038
TseFI GTSAC 2 cut(s) 69, 1315
TseI GCWGC 3 cut(s) 85, 128, 578
Tsp45I GTSAC 2 cut(s) 69, 1315
TspGWI ACGGA 4 cut(s) 371, 400, 509, 1604
TspRI CASTG 4 cut(s) 78, 475, 715, 1038
Vha464I CTTAAG 1 cut(s) 1301
VspI ATTAAT 1 cut(s) 1371
XagI CCTNNNNNAGG 1 cut(s) 604
XapI RAATTY 3 cut(s) 677, 1220, 1250
XceI RCATGY 1 cut(s) 590
XcmI CCANNNNNNNNNTGG 2 cut(s) 46, 1101
XmiI GTMKAC 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 1599
XspI CTAG 3 cut(s) 213, 291, 1652
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.