Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0011232

Physical Location & Seq

Genomic Coordinates Forward (+)

59617278 .. 59620811

Gene Structure 3534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00379130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGTGCAAGACCTCACCGGCACGCCTTTCGCACGTGCAAAGCTGTTTCCTCCCTCTCCCGCTAACCTGTACTAAAGAGTTGAAGAAACACACACACTTATCAGTTAGAAGCTTCTTCTTCCATGGCGAACAGCAACAAGACCCAATAGTTGGAGGTGCTTGTACAACCAAGAAGTTGTGCTCGTCCATGGCGTCGCTCTCTTTCACACACTTTCTACAATTACCCAGGTGCCATTTGGATTGGCCCAATAAGCCGTCACTTAATTTAGTGCAACTTCAGGGTCTTAGATTACACAGTAAAAAATGGGGCCTTGCTGCAATGCCTAAAAAGATAAACAATTCGGAGAATTCAGCTCTAGATGCAATGAATGAAGAGGAGGTTGTGGTGAAGAAGAAGACATCTAGGACTTCTAAACGTACTCGGAAGAAGACAGCATCAGATAGTGATGCTTCAAGTGATGAAGATGTCGGTGAAGGGCCCAAGAAAACCCGGGGAAGACGTAGGAAAGCTGCATCTGCTTCGGTAAGTGTGGAGGGAGAACAAACTGAGAAGAAGGTGAGGAAGAGAAGAACTAAGAAGAAGGTTGATGAGATTGAGCATCAGGTTAGTGAAGCTGAAGTTAATGAGGCTGAGGAGTTTACATTTGTTTTGGATGTGAAGGATGAGAGTGAGGATGATCTAGAATTGGAAATAGATGACGGGGAGGATATCAGCTATACTTATGGTTGGCCTCCTCTTGTCTGTTGCTTCGGAGCAGCTCAACATGCTTTTGTGCCATCGGGTAGGCCAGCCAACAGACTCTTAGATTATGAAATACATGAAAGAAAGAAAGATGCATTATGGGCCCCTGAAAAGTTCGTTAGGTCCCCTGGGGGATCTGCAGGCAGTGTAGCGATTGCTCTTGCAAAATTGGGCGGCAAGGTTGCTTTCATGGGAAAACTTGGGGATGATGACTACGGCAAGGCCATGTTATATTATATGAATGCCAACAATGTTCAAACCCGGTCTGTTCGCATGGATAGTAGAAGAGCAACTGCAGTGTCACAGATGAAGATCGGTAAAAGAAGTCGCTTGAGATTGACTTGTGTCAAACCCTGTGCTGAGGATTCTTTATCAAAGTCGGATATCAACATGGATGTGTTGAAGGAGGCAAAGATGTTCTACTTCAACACACATTCTCTGCTTGATCAAAACATGAGATCAACTACACTCCAAGCAATCAAAATTTCAAAGAAGCTAGGGGGAGTTGTTTTCTATGATGTAAACCTTCCATTACCATTATGGCAATCATCTGAAGAAACCAAGTTGTTCATACAGCAAGTATGGAATCTTTCTGATATTATTGAAGTTACTAAGCAAGAGCTTGAGTTTCTATGTGGAGTCCAGCCTTCTGAGGAATTCGATACCAAAAATAATGCCAGATCGAAGTTTGTTCATTATACACAAGAAATGATTGCACCACTTTGGCATGAAAACCTTAAGGTTTTGTTTGTGACAAATGGGACTTCTAAGATACATTACTATACAAAGGAGCATGATGGTGCTGTTAATGGGATGGAGGATCCCCCTATTAGTCCTTTCACTTCTGATATGTCAGCATCTGGAGATGGTATTGTGGCAGCTCTCATGAGAATGTTGACAGTTCAACCACATCTAGTTACTGATAGAGAATATTTGGAGCACACAATCAAGTATGCAATTGATTGTGGGGTCATAGACCAATGGTTGCTCGGGCGATCGAGTGGCTTCCCTCCTAAAGAAGATATGGAAGAAGTGGTTACTGATCCAGATGGTATCAAGTCTGTGACAGAAATGGAATATCGCACATTACCTGATGAGGTCCTTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000427 GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009295 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009662 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030880 GO:0031323 GO:0031326 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0042644 GO:0042646 GO:0042793 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061695 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PfkB

Protein Analysis

616

Amino Acids

69.24

Weight (kDa)

6.8

Isoelectric Point (pI)

51.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PfkB	PF00294	276 - 548	1.1e-29	pfkB family carbohydrate kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69200
fragaria_vesca	FvH4_4g29720 FvH4_4g29720 FvH4_4g29720 FvH4_4g29720
malus_domestica	MD13G1060100.v1.1
prunus_persica	Prupe.1G289300_v2.0.a1 Prupe.1G289300_v2.0.a1
pyrus_communis	pycom13g05350
rosa_chinensis	RchiOBHm_Chr4g0437971
rosa_laevigata	RLG00000006397
rosa_multiflora	Rmu_sc0007538.1_g000008
rosa_roxburghii	Rroxscaffold_5G00379130
rosa_rugosa	Rorug04G0306000
rosa_samantha	Rh4AG357600 Rh4BG368500 Rh4CG382600 Rh4DG363400
rosa_wichuraiana	Rw0G011510 Rw0G016160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	228
AccB7I	CCANNNNNTGG	1 cut(s)	149
AciI	CCGC	2 cut(s)	59, 915
AclWI	GGATC	4 cut(s)	883, 1556, 1569, 1778
AcsI	RAATTY	3 cut(s)	346, 1224, 1397
AcuI	CTGAAG	3 cut(s)	260, 636, 1314
AcvI	CACGTG	1 cut(s)	34
AcyI	GRCGYC	1 cut(s)	191
AfaI	GTAC	3 cut(s)	70, 163, 418
AfiI	CCNNNNNNNGG	1 cut(s)	149
AflII	CTTAAG	1 cut(s)	1478
AgsI	TTSAA	8 cut(s)	82, 453, 998, 1144, 1168, 1230, 1346, 1646
AjnI	CCWGG	2 cut(s)	224, 868
Alw21I	GWGCWC	2 cut(s)	182, 1683
AlwI	GGATC	4 cut(s)	883, 1556, 1569, 1778
AlwNI	CAGNNNCTG	1 cut(s)	1601
Ama87I	CYCGRG	2 cut(s)	489, 1730
AoxI	GGCC	7 cut(s)	242, 307, 476, 728, 785, 843, 963
ApaI	GGGCCC	2 cut(s)	480, 847
ApeKI	GCWGC	4 cut(s)	314, 509, 755, 1619
ApoI	RAATTY	3 cut(s)	346, 1224, 1397
AspS9I	GGNCC	8 cut(s)	243, 307, 476, 477, 843, 844, 864, 1840
AsuC2I	CCSGG	3 cut(s)	490, 491, 1003
AsuHPI	GGTGA	4 cut(s)	6, 397, 482, 568
AvaI	CYCGRG	2 cut(s)	489, 1730
AvaII	GGWCC	2 cut(s)	864, 1840
BaeGI	GKGCMC	2 cut(s)	480, 847
BamHI	GGATCC	1 cut(s)	1561
BanI	GGYRCC	1 cut(s)	228
BanII	GRGCYC	2 cut(s)	480, 847
BbrPI	CACGTG	1 cut(s)	34
BbsI	GAAGAC	3 cut(s)	401, 434, 502
Bbv12I	GWGCWC	2 cut(s)	182, 1683
BbvCI	CCTCAGC	2 cut(s)	630, 1101
BbvI	GCAGC	4 cut(s)	301, 496, 767, 1631
BccI	CCATC	5 cut(s)	784, 1532, 1549, 1601, 1784
BceAI	ACGGC	2 cut(s)	238, 973
BcgI	CGANNNNNNTGC	4 cut(s)	9, 43, 501, 535
BciT130I	CCWGG	2 cut(s)	226, 870
BclI	TGATCA	1 cut(s)	1186
BcnI	CCSGG	3 cut(s)	490, 491, 1003
BfaI	CTAG	5 cut(s)	356, 402, 680, 1238, 1655
BfmI	CTRYAG	2 cut(s)	879, 1035
BfrI	CTTAAG	1 cut(s)	1478
BisI	GCNGC	5 cut(s)	315, 510, 756, 916, 1620
BlsI	GCNGC	5 cut(s)	316, 511, 757, 917, 1621
Bme1390I	CCNGG	5 cut(s)	226, 490, 491, 870, 1003
Bme18I	GGWCC	2 cut(s)	864, 1840
BmeT110I	CYCGRG	2 cut(s)	489, 1730
BmgT120I	GGNCC	8 cut(s)	243, 307, 476, 477, 843, 844, 864, 1840
BmiI	GGNNCC	7 cut(s)	230, 308, 478, 845, 846, 866, 1563
BmrFI	CCNGG	5 cut(s)	226, 490, 491, 870, 1003
BmsI	GCATC	7 cut(s)	349, 436, 443, 521, 607, 823, 1607
BoxI	GACNNNNGTC	1 cut(s)	1085
BpiI	GAAGAC	3 cut(s)	401, 434, 502
BpmI	CTGGAG	1 cut(s)	1623
Bpu10I	CCTNAGC	2 cut(s)	630, 1101
BpuEI	CTTGAG	2 cut(s)	1093, 1385
BpuMI	CCSGG	3 cut(s)	490, 491, 1003
BsaAI	YACGTR	1 cut(s)	34
BsaBI	GATNNNNATC	1 cut(s)	1052
BsaHI	GRCGYC	1 cut(s)	191
BsaJI	CCNNGG	7 cut(s)	121, 186, 224, 489, 490, 868, 869
Bsc4I	CCNNNNNNNGG	1 cut(s)	149
Bse118I	RCCGGY	1 cut(s)	16
Bse3DI	GCAATG	2 cut(s)	324, 369
Bse8I	GATNNNNATC	1 cut(s)	1052
BseBI	CCWGG	2 cut(s)	226, 870
BseDI	CCNNGG	7 cut(s)	121, 186, 224, 489, 490, 868, 869
BseGI	GGATG	6 cut(s)	658, 667, 679, 952, 1141, 1560
BseJI	GATNNNNATC	1 cut(s)	1052
BseLI	CCNNNNNNNGG	1 cut(s)	149
BseMI	GCAATG	2 cut(s)	324, 369
BseMII	CTCAG	4 cut(s)	537, 621, 1092, 1383
BseRI	GAGGAG	3 cut(s)	389, 647, 723
BseSI	GKGCMC	2 cut(s)	480, 847
BseXI	GCAGC	4 cut(s)	301, 496, 767, 1631
Bsh1285I	CGRYCG	1 cut(s)	1739
BshFI	GGCC	7 cut(s)	244, 309, 478, 730, 787, 845, 965
BshNI	GGYRCC	1 cut(s)	228
BsiEI	CGRYCG	1 cut(s)	1739
BsiHKAI	GWGCWC	2 cut(s)	182, 1683
BsiHKCI	CYCGRG	2 cut(s)	489, 1730
BsiSI	CCGG	3 cut(s)	17, 490, 1003
BslFI	GGGAC	2 cut(s)	850, 1516
BslI	CCNNNNNNNGG	1 cut(s)	149
BsmFI	GGGAC	2 cut(s)	850, 1516
BsmI	GAATGC	1 cut(s)	988
BsnI	GGCC	7 cut(s)	244, 309, 478, 730, 787, 845, 965
BsoBI	CYCGRG	2 cut(s)	489, 1730
Bsp120I	GGGCCC	2 cut(s)	476, 843
Bsp1286I	GDGCHC	4 cut(s)	182, 480, 847, 1683
Bsp1407I	TGTACA	1 cut(s)	161
Bsp143I	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
Bsp19I	CCATGG	2 cut(s)	121, 186
BspACI	CCGC	2 cut(s)	59, 915
BspANI	GGCC	7 cut(s)	244, 309, 478, 730, 787, 845, 965
BspCNI	CTCAG	4 cut(s)	538, 622, 1093, 1384
BspHI	TCATGA	1 cut(s)	1626
BspLI	GGNNCC	7 cut(s)	230, 308, 478, 845, 846, 866, 1563
BspMAI	CTGCAG	2 cut(s)	883, 1039
BspPI	GGATC	4 cut(s)	883, 1556, 1569, 1778
BspQI	GCTCTTC	1 cut(s)	1021
BspT107I	GGYRCC	1 cut(s)	228
BspTI	CTTAAG	1 cut(s)	1478
BsrDI	GCAATG	2 cut(s)	324, 369
BsrFI	RCCGGY	1 cut(s)	16
BsrGI	TGTACA	1 cut(s)	161
BssAI	RCCGGY	1 cut(s)	16
BssECI	CCNNGG	7 cut(s)	121, 186, 224, 489, 490, 868, 869
BssMI	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
BssNI	GRCGYC	1 cut(s)	191
BssT1I	CCWWGG	2 cut(s)	121, 186
Bst2UI	CCWGG	2 cut(s)	226, 870
Bst4CI	ACNGT	2 cut(s)	296, 1642
Bst6I	CTCTTC	3 cut(s)	366, 557, 1021
BstACI	GRCGYC	1 cut(s)	191
BstAFI	CTTAAG	1 cut(s)	1478
BstAUI	TGTACA	1 cut(s)	161
BstBAI	YACGTR	1 cut(s)	34
BstC8I	GCNNGC	3 cut(s)	22, 789, 883
BstDEI	CTNAG	9 cut(s)	284, 546, 573, 630, 802, 1101, 1353, 1392, 1509
BstDSI	CCRYGG	2 cut(s)	121, 186
BstF5I	GGATG	6 cut(s)	658, 667, 679, 952, 1141, 1560
BstKTI	GATC	9 cut(s)	679, 878, 1056, 1189, 1202, 1424, 1564, 1739, 1786
BstMBI	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
BstMCI	CGRYCG	1 cut(s)	1739
BstMWI	GCNNNNNNNGC	5 cut(s)	250, 359, 515, 764, 842
BstNI	CCWGG	2 cut(s)	226, 870
BstNSI	RCATGY	1 cut(s)	767
BstPAI	GACNNNNGTC	1 cut(s)	1085
BstSCI	CCNGG	5 cut(s)	224, 488, 489, 868, 1001
BstSFI	CTRYAG	2 cut(s)	879, 1035
BstSLI	GKGCMC	2 cut(s)	480, 847
BstV1I	GCAGC	4 cut(s)	301, 496, 767, 1631
BstV2I	GAAGAC	3 cut(s)	401, 434, 502
BstX2I	RGATCY	2 cut(s)	875, 1561
BstYI	RGATCY	2 cut(s)	875, 1561
BsuRI	GGCC	7 cut(s)	244, 309, 478, 730, 787, 845, 965
BtgI	CCRYGG	2 cut(s)	121, 186
BtsCI	GGATG	6 cut(s)	658, 667, 679, 952, 1141, 1560
BtsI	GCAGTG	2 cut(s)	892, 1044
BtsIMutI	CAGTG	2 cut(s)	892, 1044
Cac8I	GCNNGC	3 cut(s)	22, 789, 883
CaiI	CAGNNNCTG	1 cut(s)	1601
CciI	TCATGA	1 cut(s)	1626
Cfr10I	RCCGGY	1 cut(s)	16
Cfr13I	GGNCC	8 cut(s)	243, 307, 476, 477, 843, 844, 864, 1840
Cfr9I	CCCGGG	1 cut(s)	489
CseI	GACGC	1 cut(s)	180
Csp6I	GTAC	3 cut(s)	69, 162, 417
CviQI	GTAC	3 cut(s)	69, 162, 417
DdeI	CTNAG	9 cut(s)	284, 546, 573, 630, 802, 1101, 1353, 1392, 1509
DpnI	GATC	9 cut(s)	678, 877, 1055, 1188, 1201, 1423, 1563, 1738, 1785
DpnII	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
Eam1104I	CTCTTC	3 cut(s)	366, 557, 1021
EarI	CTCTTC	3 cut(s)	366, 557, 1021
Eco130I	CCWWGG	2 cut(s)	121, 186
Eco24I	GRGCYC	2 cut(s)	480, 847
Eco32I	GATATC	2 cut(s)	709, 1126
Eco47I	GGWCC	2 cut(s)	864, 1840
Eco57I	CTGAAG	3 cut(s)	260, 636, 1314
Eco72I	CACGTG	1 cut(s)	34
Eco88I	CYCGRG	2 cut(s)	489, 1730
EcoO109I	RGGNCCY	5 cut(s)	307, 476, 844, 864, 1840
EcoRI	GAATTC	2 cut(s)	346, 1397
EcoRII	CCWGG	2 cut(s)	224, 868
EcoRV	GATATC	2 cut(s)	709, 1126
EcoT14I	CCWWGG	2 cut(s)	121, 186
EcoT22I	ATGCAT	1 cut(s)	838
EcoT38I	GRGCYC	2 cut(s)	480, 847
ErhI	CCWWGG	2 cut(s)	121, 186
FaqI	GGGAC	2 cut(s)	850, 1516
FauI	CCCGC	1 cut(s)	66
FbaI	TGATCA	1 cut(s)	1186
Fnu4HI	GCNGC	5 cut(s)	315, 510, 756, 916, 1620
FokI	GGATG	6 cut(s)	665, 674, 686, 959, 1148, 1567
FriOI	GRGCYC	2 cut(s)	480, 847
Fsp4HI	GCNGC	5 cut(s)	315, 510, 756, 916, 1620
FspBI	CTAG	5 cut(s)	356, 402, 680, 1238, 1655
GluI	GCNGC	5 cut(s)	315, 510, 756, 916, 1620
GsuI	CTGGAG	1 cut(s)	1623
HaeIII	GGCC	7 cut(s)	244, 309, 478, 730, 787, 845, 965
HapII	CCGG	3 cut(s)	17, 490, 1003
HgaI	GACGC	1 cut(s)	180
Hin1I	GRCGYC	1 cut(s)	191
HincII	GTYRAC	1 cut(s)	1638
HindII	GTYRAC	1 cut(s)	1638
HindIII	AAGCTT	1 cut(s)	109
HinfI	GANTC	4 cut(s)	798, 1106, 1327, 1380
HpaII	CCGG	3 cut(s)	17, 490, 1003
HphI	GGTGA	4 cut(s)	6, 397, 482, 568
Hpy166II	GTNNAC	3 cut(s)	639, 1264, 1638
Hpy188I	TCNGA	9 cut(s)	343, 423, 439, 752, 1123, 1294, 1336, 1393, 1588
Hpy188III	TCNNGA	5 cut(s)	356, 680, 1602, 1627, 1787
Hpy8I	GTNNAC	3 cut(s)	639, 1264, 1638
Hpy99I	CGWCG	1 cut(s)	196
HpyAV	CCTTC	7 cut(s)	467, 547, 574, 652, 1138, 1277, 1398
HpyCH4III	ACNGT	2 cut(s)	296, 1642
HpyCH4IV	ACGT	3 cut(s)	33, 415, 499
HpyF10VI	GCNNNNNNNGC	5 cut(s)	250, 359, 515, 764, 842
HpyF3I	CTNAG	9 cut(s)	284, 546, 573, 630, 802, 1101, 1353, 1392, 1509
HpySE526I	ACGT	3 cut(s)	33, 415, 499
Hsp92I	GRCGYC	1 cut(s)	191
Ksp22I	TGATCA	1 cut(s)	1186
Kzo9I	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
LguI	GCTCTTC	1 cut(s)	1021
LmnI	GCTCC	3 cut(s)	752, 1531, 1678
Lsp1109I	GCAGC	4 cut(s)	301, 496, 767, 1631
LweI	GCATC	7 cut(s)	349, 436, 443, 521, 607, 823, 1607
MaeI	CTAG	5 cut(s)	356, 402, 680, 1238, 1655
MaeII	ACGT	3 cut(s)	33, 415, 499
MaeIII	GTNAC	7 cut(s)	255, 1041, 1348, 1492, 1657, 1777, 1804
MalI	GATC	9 cut(s)	678, 877, 1055, 1188, 1201, 1423, 1563, 1738, 1785
MboI	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
MfeI	CAATTG	1 cut(s)	1698
MflI	RGATCY	2 cut(s)	875, 1561
MhlI	GDGCHC	4 cut(s)	182, 480, 847, 1683
MluCI	AATT	9 cut(s)	218, 262, 337, 346, 683, 908, 1224, 1397, 1698
MlyI	GAGTC	2 cut(s)	792, 1389
MmeI	TCCRAC	2 cut(s)	130, 1101
Mph1103I	ATGCAT	1 cut(s)	838
MseI	TTAA	4 cut(s)	261, 621, 1479, 1548
MslI	CAYNNNNRTG	3 cut(s)	1136, 1539, 1631
MspCI	CTTAAG	1 cut(s)	1478
MspI	CCGG	3 cut(s)	17, 490, 1003
MspR9I	CCNGG	5 cut(s)	226, 490, 491, 870, 1003
MunI	CAATTG	1 cut(s)	1698
Mva1269I	GAATGC	1 cut(s)	988
MvaI	CCWGG	2 cut(s)	226, 870
MwoI	GCNNNNNNNGC	5 cut(s)	250, 359, 515, 764, 842
NciI	CCSGG	3 cut(s)	490, 491, 1003
NcoI	CCATGG	2 cut(s)	121, 186
NdeII	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
NlaIV	GGNNCC	7 cut(s)	230, 308, 478, 845, 846, 866, 1563
NmuCI	GTSAC	4 cut(s)	255, 1041, 1492, 1804
NsiI	ATGCAT	1 cut(s)	838
NspI	RCATGY	1 cut(s)	767
PagI	TCATGA	1 cut(s)	1626
PasI	CCCWGGG	1 cut(s)	869
PciSI	GCTCTTC	1 cut(s)	1021
PcsI	WCGNNNNNNNCGW	1 cut(s)	188
PctI	GAATGC	1 cut(s)	988
PfeI	GAWTC	2 cut(s)	1106, 1327
PflMI	CCANNNNNTGG	1 cut(s)	149
PkrI	GCNGC	5 cut(s)	316, 511, 757, 917, 1621
Ple19I	CGATCG	1 cut(s)	1739
PleI	GAGTC	2 cut(s)	792, 1388
PmaCI	CACGTG	1 cut(s)	34
PmlI	CACGTG	1 cut(s)	34
PpsI	GAGTC	2 cut(s)	792, 1388
Ppu21I	YACGTR	1 cut(s)	34
PpuMI	RGGWCCY	2 cut(s)	864, 1840
PshAI	GACNNNNGTC	1 cut(s)	1085
Psp5II	RGGWCCY	2 cut(s)	864, 1840
Psp6I	CCWGG	2 cut(s)	224, 868
PspCI	CACGTG	1 cut(s)	34
PspGI	CCWGG	2 cut(s)	224, 868
PspN4I	GGNNCC	7 cut(s)	230, 308, 478, 845, 846, 866, 1563
PspOMI	GGGCCC	2 cut(s)	476, 843
PspPI	GGNCC	8 cut(s)	243, 307, 476, 477, 843, 844, 864, 1840
PspPPI	RGGWCCY	2 cut(s)	864, 1840
PstI	CTGCAG	2 cut(s)	883, 1039
PstNI	CAGNNNCTG	1 cut(s)	1601
PsuI	RGATCY	2 cut(s)	875, 1561
PvuI	CGATCG	1 cut(s)	1739
RsaI	GTAC	3 cut(s)	70, 163, 418
RsaNI	GTAC	3 cut(s)	69, 162, 417
RseI	CAYNNNNRTG	3 cut(s)	1136, 1539, 1631
SapI	GCTCTTC	1 cut(s)	1021
SaqAI	TTAA	4 cut(s)	261, 621, 1479, 1548
SatI	GCNGC	5 cut(s)	315, 510, 756, 916, 1620
Sau3AI	GATC	9 cut(s)	676, 875, 1053, 1186, 1199, 1421, 1561, 1736, 1783
Sau96I	GGNCC	8 cut(s)	243, 307, 476, 477, 843, 844, 864, 1840
SchI	GAGTC	2 cut(s)	792, 1389
ScrFI	CCNGG	5 cut(s)	226, 490, 491, 870, 1003
SduI	GDGCHC	4 cut(s)	182, 480, 847, 1683
SfaNI	GCATC	7 cut(s)	349, 436, 443, 521, 607, 823, 1607
SfcI	CTRYAG	2 cut(s)	879, 1035
SinI	GGWCC	2 cut(s)	864, 1840
SmaI	CCCGGG	1 cut(s)	491
SmiMI	CAYNNNNRTG	3 cut(s)	1136, 1539, 1631
SmlI	CTYRAG	3 cut(s)	1072, 1364, 1478
SmoI	CTYRAG	3 cut(s)	1072, 1364, 1478
Sse9I	AATT	9 cut(s)	218, 262, 337, 346, 683, 908, 1224, 1397, 1698
SsiI	CCGC	2 cut(s)	59, 915
SspI	AATATT	1 cut(s)	1673
SspMI	CTAG	5 cut(s)	356, 402, 680, 1238, 1655
StyD4I	CCNGG	5 cut(s)	224, 488, 489, 868, 1001
StyI	CCWWGG	2 cut(s)	121, 186
TaaI	ACNGT	2 cut(s)	296, 1642
TaiI	ACGT	3 cut(s)	36, 418, 502
TaqI	TCGA	3 cut(s)	1401, 1424, 1739
TasI	AATT	9 cut(s)	218, 262, 337, 346, 683, 908, 1224, 1397, 1698
TatI	WGTACW	2 cut(s)	68, 161
TauI	GCSGC	1 cut(s)	918
TfiI	GAWTC	2 cut(s)	1106, 1327
Tru1I	TTAA	4 cut(s)	261, 621, 1479, 1548
Tru9I	TTAA	4 cut(s)	261, 621, 1479, 1548
TscAI	CASTG	2 cut(s)	892, 1044
TseFI	GTSAC	4 cut(s)	255, 1041, 1492, 1804
TseI	GCWGC	4 cut(s)	314, 509, 755, 1619
Tsp45I	GTSAC	4 cut(s)	255, 1041, 1492, 1804
TspMI	CCCGGG	1 cut(s)	489
TspRI	CASTG	2 cut(s)	892, 1044
Van91I	CCANNNNNTGG	1 cut(s)	149
Vha464I	CTTAAG	1 cut(s)	1478
VpaK11BI	GGWCC	2 cut(s)	864, 1840
XapI	RAATTY	3 cut(s)	346, 1224, 1397
XbaI	TCTAGA	2 cut(s)	355, 679
XceI	RCATGY	1 cut(s)	767
XcmI	CCANNNNNNNNNTGG	2 cut(s)	232, 1278
XmaI	CCCGGG	1 cut(s)	489
XspI	CTAG	5 cut(s)	356, 402, 680, 1238, 1655
Zsp2I	ATGCAT	1 cut(s)	838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.