AT1G72540
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
27314877 .. 27316669
1793 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G72540.1

Sequence Viewer

Length: 1353 bp
ATGAGATTTTCTTGGAAGAATATATGTCTTCCCATAAGCTGCATCAATAACACAAACCAGAAGAAGACTACAACAACAAACCCACCAAAGGAAAAACTTCTTCTTCTCTCCAGACAAACCTCTGTTCCAAGCAGAGTCTACATGTCCGATTTCAGCAATTCAACCATCTCACTCAACGACTTCTCAAACTCTTTCTTCATAAACATTCACATATTCACCTACGAAGAGCTCAAAACGATCACACAAGGCTTCTCAAAGTATAATTTCCTCGGTGAAGGAGGTTTCGGGGAAGTCTACAAAGGTTTCGTTGATGATAGCCTCAAGACTGGTTTGAAAGATCAGCCTGTTGCTGTTAAGGCTTTGAAACGAGAAGGTGGACAAGGCCATAGAGAGTGGCTGGCTGAAGTTATAATCCTTGGTCAGTTGAAGCATCCACATCTGGTAAATTTGGTCGGATACTGCTGTGAGGATGATGAGAGGCTTCTAGTATACGAGTACATGGAACGAGGCAATCTGGAAGACCATTTATTTCAAAAGTATGGTGGAGCCTTGCCTTGGTTAACAAGAGTGAAGATTCTTCTAGGTGCTGCGAAAGGCCTTGAGTTCCTTCACAAACAAGAGAAACCTGTCATATACAGAGATTTTAAGCCTTCCAACATCCTCTTGAGCTCGGACTTCAGCTCTAAGCTTTCAGATTTCGGCTTAGCCACAGATGGATCAGAGGAAGAAGACTCAAACTTTACCAAAAGTGTAATGGGCACAGAAGGATATGCAGCTCCAGAATACATCTCAGCAGGTAATCTGACGACAATGAGTGACGTGTTCAGTTTTGGGGTGGTGCTTTTGGAGATGCTAACAGCTAGAAAGGCAGTGGAGAAGTACCGGGCACAGAGAGGGAGGAACCTAGTGGAATGGGCAAGACCCATGTTAAAGGATCCCAACAAGCTTGAACGGATCATAGACCCGAGTCTCGAAGGGAAATACTCGGTAGAAGGCATCAGAAAGGCAGCTGCTTTGGCTTACCAGTGCCTGAGCCACAACCCTAAGTCACGACCAACTATGACCACTGTGGTTAAAACCCTAGAGCCTATTCTAGACCTCAAAGATATCCAAAACGGACCGTTTGTGTACATTGTTCCAGTAGCAGGTGTAAGTGAAGTTCATGAGATCAAATGTAAGGATGATGTCAAAGTCGTAAAAGAGGAAACAGAGAAGGACGCAAAAGTCTTCCCACGACACCGAGCAGGTCGAAGGAACAGACGTAAACACAAGGCAATGAGGTCTCGTGCAGTATATTCAGACACTGCTCTATACAAGAGTCTAGGAACCAGTTTATATAATCCAGCCAACTAA

Protein Analysis

450

Amino Acids

50.87

Weight (kDa)

9.05

Isoelectric Point (pI)

35.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 85 - 359 3.8e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 88 - 361 7e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014934)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72540
fragaria_vesca FvH4_6g34900
malus_domestica MD09G1181400.v1.1 MD17G1167600.v1.1
prunus_persica Prupe.3G039500_v2.0.a1
pyrus_communis pycom09g09900 pycom17g15930
rosa_chinensis RchiOBHm_Chr2g0145801
rosa_laevigata RLG00000020168
rosa_multiflora Rmu_sc0000473.1_g000002
rosa_roxburghii Rroxscaffold_152G00434760 Rroxscaffold_2G00100440
rosa_rugosa Rorug02G0393300
rosa_samantha Rh2AG447600 Rh2CG434500
rosa_wichuraiana Rw2G036580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 410
AarI CACCTGC 1 cut(s) 1136
AasI GACNNNNNNGTC 1 cut(s) 1223
Acc36I ACCTGC 3 cut(s) 785, 1136, 1235
AccI GTMKAC 3 cut(s) 138, 294, 489
AclWI GGATC 4 cut(s) 724, 929, 942, 962
AcsI RAATTY 1 cut(s) 445
AcuI CTGAAG 2 cut(s) 423, 661
AfaI GTAC 3 cut(s) 497, 881, 1130
AfiI CCNNNNNNNGG 3 cut(s) 88, 555, 1145
AflIII ACRYGT 2 cut(s) 141, 819
AgsI TTSAA 6 cut(s) 162, 334, 364, 427, 533, 950
AjiI CACGTC 1 cut(s) 820
AluBI AGCT 9 cut(s) 39, 229, 669, 681, 688, 776, 860, 946, 1010
AluI AGCT 9 cut(s) 39, 229, 669, 681, 688, 776, 860, 946, 1010
Alw21I GWGCWC 2 cut(s) 231, 671
Alw26I GTCTC 2 cut(s) 974, 1287
AlwI GGATC 4 cut(s) 724, 929, 942, 962
AlwNI CAGNNNCTG 2 cut(s) 1030, 1304
Ama87I CYCGRG 1 cut(s) 964
AoxI GGCC 2 cut(s) 382, 595
ApeKI GCWGC 5 cut(s) 39, 587, 773, 1007, 1010
ApoI RAATTY 1 cut(s) 445
Asp700I GAANNNNTTC 1 cut(s) 96
AspS9I GGNCC 1 cut(s) 1118
AsuC2I CCSGG 1 cut(s) 884
AsuHPI GGTGA 2 cut(s) 208, 284
AvaI CYCGRG 1 cut(s) 964
AvaII GGWCC 1 cut(s) 1118
BaeGI GKGCMC 2 cut(s) 761, 889
BaeI ACNNNNGTAYC 2 cut(s) 448, 481
BamHI GGATCC 1 cut(s) 934
BanII GRGCYC 2 cut(s) 231, 671
BauI CACGAG 1 cut(s) 1284
BbsI GAAGAC 5 cut(s) 20, 71, 525, 735, 1219
Bbv12I GWGCWC 2 cut(s) 231, 671
BbvI GCAGC 5 cut(s) 26, 574, 785, 997, 1019
BccI CCATC 2 cut(s) 173, 707
BciVI GTATCC 1 cut(s) 449
BcnI CCSGG 1 cut(s) 884
BcoDI GTCTC 2 cut(s) 974, 1287
BfaI CTAG 7 cut(s) 485, 581, 861, 905, 1082, 1094, 1322
BfuAI ACCTGC 3 cut(s) 785, 1136, 1235
BfuI GTATCC 1 cut(s) 449
BisI GCNGC 5 cut(s) 40, 588, 774, 1008, 1011
BlpI GCTNAGC 1 cut(s) 703
BlsI GCNGC 5 cut(s) 41, 589, 775, 1009, 1012
Bme1390I CCNGG 1 cut(s) 884
Bme18I GGWCC 1 cut(s) 1118
BmeT110I CYCGRG 1 cut(s) 964
BmgBI CACGTC 1 cut(s) 820
BmgT120I GGNCC 1 cut(s) 1118
BmiI GGNNCC 4 cut(s) 547, 902, 936, 1327
BmrFI CCNGG 1 cut(s) 884
BmsI GCATC 4 cut(s) 51, 439, 840, 1005
BoxI GACNNNNGTC 1 cut(s) 966
BpiI GAAGAC 5 cut(s) 20, 71, 525, 735, 1219
BpmI CTGGAG 2 cut(s) 94, 762
Bpu10I CCTNAGC 1 cut(s) 1031
Bpu1102I GCTNAGC 1 cut(s) 703
BpuEI CTTGAG 3 cut(s) 305, 620, 685
BpuMI CCSGG 1 cut(s) 884
BsaI GGTCTC 1 cut(s) 1287
BsaJI CCNNGG 3 cut(s) 268, 415, 554
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 555, 1145
Bse1I ACTGG 4 cut(s) 331, 1024, 1139, 1329
Bse3DI GCAATG 1 cut(s) 1281
BseDI CCNNGG 3 cut(s) 268, 415, 554
BseGI GGATG 4 cut(s) 430, 475, 657, 1186
BseLI CCNNNNNNNGG 3 cut(s) 88, 555, 1145
BseMI GCAATG 1 cut(s) 1281
BseMII CTCAG 2 cut(s) 804, 1022
BseNI ACTGG 4 cut(s) 331, 1024, 1139, 1329
BseSI GKGCMC 2 cut(s) 761, 889
BseXI GCAGC 5 cut(s) 26, 574, 785, 997, 1019
BsgI GTGCAG 1 cut(s) 1308
BshFI GGCC 2 cut(s) 384, 597
BsiHKAI GWGCWC 2 cut(s) 231, 671
BsiHKCI CYCGRG 1 cut(s) 964
BsiSI CCGG 1 cut(s) 883
BslI CCNNNNNNNGG 3 cut(s) 88, 555, 1145
BsmAI GTCTC 2 cut(s) 974, 1287
BsnI GGCC 2 cut(s) 384, 597
Bso31I GGTCTC 1 cut(s) 1287
BsoBI CYCGRG 1 cut(s) 964
Bsp1286I GDGCHC 4 cut(s) 231, 671, 761, 889
Bsp1407I TGTACA 1 cut(s) 1128
Bsp143I GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
Bsp1720I GCTNAGC 1 cut(s) 703
BspANI GGCC 2 cut(s) 384, 597
BspCNI CTCAG 2 cut(s) 803, 1023
BspHI TCATGA 1 cut(s) 1162
BspLI GGNNCC 4 cut(s) 547, 902, 936, 1327
BspMI ACCTGC 3 cut(s) 785, 1136, 1235
BspPI GGATC 4 cut(s) 724, 929, 942, 962
BspQI GCTCTTC 1 cut(s) 219
BspTNI GGTCTC 1 cut(s) 1287
BsrDI GCAATG 1 cut(s) 1281
BsrGI TGTACA 1 cut(s) 1128
BsrI ACTGG 4 cut(s) 331, 1024, 1139, 1329
BssECI CCNNGG 3 cut(s) 268, 415, 554
BssMI GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
BssNAI GTATAC 1 cut(s) 490
BssSI CACGAG 1 cut(s) 1284
BssT1I CCWWGG 2 cut(s) 415, 554
Bst1107I GTATAC 1 cut(s) 490
Bst2BI CACGAG 1 cut(s) 1284
Bst4CI ACNGT 2 cut(s) 1069, 1122
Bst6I CTCTTC 1 cut(s) 219
BstAUI TGTACA 1 cut(s) 1128
BstC8I GCNNGC 1 cut(s) 399
BstDEI CTNAG 5 cut(s) 684, 703, 790, 1031, 1044
BstF5I GGATG 4 cut(s) 430, 475, 657, 1186
BstKTI GATC 6 cut(s) 240, 340, 719, 937, 957, 1170
BstMAI GTCTC 2 cut(s) 974, 1287
BstMBI GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
BstMWI GCNNNNNNNGC 3 cut(s) 356, 866, 1016
BstNSI RCATGY 1 cut(s) 145
BstPAI GACNNNNGTC 1 cut(s) 966
BstSCI CCNGG 1 cut(s) 882
BstSLI GKGCMC 2 cut(s) 761, 889
BstV1I GCAGC 5 cut(s) 26, 574, 785, 997, 1019
BstV2I GAAGAC 5 cut(s) 20, 71, 525, 735, 1219
BstX2I RGATCY 1 cut(s) 934
BstYI RGATCY 1 cut(s) 934
BstZ17I GTATAC 1 cut(s) 490
BsuI GTATCC 1 cut(s) 449
BsuRI GGCC 2 cut(s) 384, 597
BtrI CACGTC 1 cut(s) 820
BtsCI GGATG 4 cut(s) 430, 475, 657, 1186
BtsI GCAGTG 2 cut(s) 876, 1302
BtsIMutI CAGTG 4 cut(s) 876, 1031, 1065, 1302
BveI ACCTGC 3 cut(s) 785, 1136, 1235
Cac8I GCNNGC 1 cut(s) 399
CaiI CAGNNNCTG 2 cut(s) 1030, 1304
CciI TCATGA 1 cut(s) 1162
Cfr13I GGNCC 1 cut(s) 1118
CpoI CGGWCCG 1 cut(s) 1118
CseI GACGC 1 cut(s) 1226
Csp6I GTAC 3 cut(s) 496, 880, 1129
CspI CGGWCCG 1 cut(s) 1118
CviAII CATG 4 cut(s) 142, 499, 925, 1163
CviQI GTAC 3 cut(s) 496, 880, 1129
DdeI CTNAG 5 cut(s) 684, 703, 790, 1031, 1044
DpnI GATC 6 cut(s) 239, 339, 718, 936, 956, 1169
DpnII GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
DrdI GACNNNNNNGTC 1 cut(s) 1223
DseDI GACNNNNNNGTC 1 cut(s) 1223
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
Ecl136II GAGCTC 2 cut(s) 229, 669
Eco130I CCWWGG 2 cut(s) 415, 554
Eco147I AGGCCT 1 cut(s) 597
Eco24I GRGCYC 2 cut(s) 231, 671
Eco31I GGTCTC 1 cut(s) 1287
Eco32I GATATC 1 cut(s) 1108
Eco47I GGWCC 1 cut(s) 1118
Eco53kI GAGCTC 2 cut(s) 229, 669
Eco57I CTGAAG 2 cut(s) 423, 661
Eco88I CYCGRG 1 cut(s) 964
EcoICRI GAGCTC 2 cut(s) 229, 669
EcoRV GATATC 1 cut(s) 1108
EcoT14I CCWWGG 2 cut(s) 415, 554
EcoT38I GRGCYC 2 cut(s) 231, 671
ErhI CCWWGG 2 cut(s) 415, 554
FaeI CATG 4 cut(s) 145, 502, 928, 1166
FatI CATG 4 cut(s) 141, 498, 924, 1162
FblI GTMKAC 3 cut(s) 138, 294, 489
Fnu4HI GCNGC 5 cut(s) 40, 588, 774, 1008, 1011
FokI GGATG 4 cut(s) 417, 482, 644, 1193
FriOI GRGCYC 2 cut(s) 231, 671
Fsp4HI GCNGC 5 cut(s) 40, 588, 774, 1008, 1011
FspBI CTAG 7 cut(s) 485, 581, 861, 905, 1082, 1094, 1322
GluI GCNGC 5 cut(s) 40, 588, 774, 1008, 1011
GsuI CTGGAG 2 cut(s) 94, 762
HaeIII GGCC 2 cut(s) 384, 597
HapII CCGG 1 cut(s) 883
HgaI GACGC 1 cut(s) 1226
Hin1II CATG 4 cut(s) 145, 502, 928, 1166
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HindIII AAGCTT 2 cut(s) 686, 944
HinfI GANTC 5 cut(s) 135, 574, 731, 967, 1318
HpaI GTTAAC 1 cut(s) 561
HpaII CCGG 1 cut(s) 883
HphI GGTGA 2 cut(s) 208, 284
Hpy166II GTNNAC 7 cut(s) 139, 295, 377, 490, 561, 1129, 1265
Hpy188I TCNGA 8 cut(s) 148, 455, 673, 694, 721, 804, 1001, 1300
Hpy188III TCNNGA 9 cut(s) 111, 322, 515, 664, 779, 971, 1050, 1094, 1163
Hpy8I GTNNAC 7 cut(s) 139, 295, 377, 490, 561, 1129, 1265
HpyAV CCTTC 9 cut(s) 269, 365, 617, 660, 758, 968, 986, 1207, 1245
HpyCH4III ACNGT 2 cut(s) 1069, 1122
HpyCH4IV ACGT 2 cut(s) 819, 1261
HpyCH4V TGCA 3 cut(s) 42, 773, 1289
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 866, 1016
HpyF3I CTNAG 5 cut(s) 684, 703, 790, 1031, 1044
HpySE526I ACGT 2 cut(s) 819, 1261
Hsp92II CATG 4 cut(s) 145, 502, 928, 1166
KspAI GTTAAC 1 cut(s) 561
Kzo9I GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
LguI GCTCTTC 1 cut(s) 219
LmnI GCTCC 2 cut(s) 545, 781
Lsp1109I GCAGC 5 cut(s) 26, 574, 785, 997, 1019
LweI GCATC 4 cut(s) 51, 439, 840, 1005
MaeI CTAG 7 cut(s) 485, 581, 861, 905, 1082, 1094, 1322
MaeII ACGT 2 cut(s) 819, 1261
MaeIII GTNAC 2 cut(s) 815, 1047
MalI GATC 6 cut(s) 239, 339, 718, 936, 956, 1169
MboI GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
MflI RGATCY 1 cut(s) 934
MhlI GDGCHC 4 cut(s) 231, 671, 761, 889
MluCI AATT 3 cut(s) 157, 262, 445
MlyI GAGTC 4 cut(s) 144, 725, 976, 1327
MmeI TCCRAC 2 cut(s) 433, 678
MroXI GAANNNNTTC 1 cut(s) 96
MseI TTAA 5 cut(s) 354, 560, 645, 929, 1074
MspA1I CMGCKG 1 cut(s) 1010
MspI CCGG 1 cut(s) 883
MspR9I CCNGG 1 cut(s) 884
MwoI GCNNNNNNNGC 3 cut(s) 356, 866, 1016
NciI CCSGG 1 cut(s) 884
NdeII GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
NlaIII CATG 4 cut(s) 145, 502, 928, 1166
NlaIV GGNNCC 4 cut(s) 547, 902, 936, 1327
NmuCI GTSAC 2 cut(s) 815, 1047
NspI RCATGY 1 cut(s) 145
PagI TCATGA 1 cut(s) 1162
PaqCI CACCTGC 1 cut(s) 1136
PceI AGGCCT 1 cut(s) 597
PciI ACATGT 1 cut(s) 141
PciSI GCTCTTC 1 cut(s) 219
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 1 cut(s) 574
PkrI GCNGC 5 cut(s) 41, 589, 775, 1009, 1012
PleI GAGTC 4 cut(s) 143, 725, 975, 1326
PpsI GAGTC 4 cut(s) 143, 725, 975, 1326
PscI ACATGT 1 cut(s) 141
PshAI GACNNNNGTC 1 cut(s) 966
PsiI TTATAA 1 cut(s) 410
Psp124BI GAGCTC 2 cut(s) 231, 671
PspN4I GGNNCC 4 cut(s) 547, 902, 936, 1327
PspPI GGNCC 1 cut(s) 1118
PsrI GAACNNNNNNTAC 2 cut(s) 1143, 1175
PstNI CAGNNNCTG 2 cut(s) 1030, 1304
PsuI RGATCY 1 cut(s) 934
PvuII CAGCTG 1 cut(s) 1010
RsaI GTAC 3 cut(s) 497, 881, 1130
RsaNI GTAC 3 cut(s) 496, 880, 1129
Rsr2I CGGWCCG 1 cut(s) 1118
RsrII CGGWCCG 1 cut(s) 1118
SacI GAGCTC 2 cut(s) 231, 671
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 5 cut(s) 354, 560, 645, 929, 1074
SatI GCNGC 5 cut(s) 40, 588, 774, 1008, 1011
Sau3AI GATC 6 cut(s) 237, 337, 716, 934, 954, 1167
Sau96I GGNCC 1 cut(s) 1118
SchI GAGTC 4 cut(s) 144, 725, 976, 1327
ScrFI CCNGG 1 cut(s) 884
SduI GDGCHC 4 cut(s) 231, 671, 761, 889
SfaNI GCATC 4 cut(s) 51, 439, 840, 1005
SinI GGWCC 1 cut(s) 1118
SmlI CTYRAG 3 cut(s) 320, 599, 664
SmoI CTYRAG 3 cut(s) 320, 599, 664
Sse9I AATT 3 cut(s) 157, 262, 445
SseBI AGGCCT 1 cut(s) 597
SspMI CTAG 7 cut(s) 485, 581, 861, 905, 1082, 1094, 1322
SstI GAGCTC 2 cut(s) 231, 671
StuI AGGCCT 1 cut(s) 597
StyD4I CCNGG 1 cut(s) 882
StyI CCWWGG 2 cut(s) 415, 554
TaaI ACNGT 2 cut(s) 1069, 1122
TaiI ACGT 2 cut(s) 822, 1264
TaqI TCGA 2 cut(s) 972, 1249
TasI AATT 3 cut(s) 157, 262, 445
TatI WGTACW 2 cut(s) 495, 1128
TfiI GAWTC 1 cut(s) 574
Tru1I TTAA 5 cut(s) 354, 560, 645, 929, 1074
Tru9I TTAA 5 cut(s) 354, 560, 645, 929, 1074
TscAI CASTG 4 cut(s) 876, 1031, 1072, 1309
TseFI GTSAC 2 cut(s) 815, 1047
TseI GCWGC 5 cut(s) 39, 587, 773, 1007, 1010
Tsp45I GTSAC 2 cut(s) 815, 1047
TspDTI ATGAA 2 cut(s) 187, 1151
TspGWI ACGGA 2 cut(s) 967, 1131
TspRI CASTG 4 cut(s) 876, 1031, 1072, 1309
VpaK11BI GGWCC 1 cut(s) 1118
XapI RAATTY 1 cut(s) 445
XbaI TCTAGA 1 cut(s) 1093
XceI RCATGY 1 cut(s) 145
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XmiI GTMKAC 3 cut(s) 138, 294, 489
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 7 cut(s) 485, 581, 861, 905, 1082, 1094, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.