pycom09g09900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
8012920 .. 8014800
1881 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g09900.5

Sequence Viewer

Length: 1371 bp
ATGAGTCTCAAGAAACTAGCATTCACCTTCTTGACTCCTAGTTGTTTCAAGGCCAACAAACTAAATGCAGATCAAAAATCCCAAACGTCAAAAGAAATCTCATTGCGGAGATTGTCACTCTCGGATTTGAGTAACTCATCGGTATGCACAGCCCTCAGTGATCTGTCAAATTCACTTATTGGCTCAAACCTTCATATTTTTGCACACAAGGAGCTTAAAAAGATTACACAAAGTTTCTCCAAGAGCAACTATCTCGGTGAGGGTGGGTTCGGGCAGGTGTACAAAGGTTTCATTGATGACAAGCTTAGGCCTGGATTGGAAGCTCAGCCTGTTGCTGTTAAAGTCTTGGATTTAGATGGCAAACAAGGACATAGGGAGTGGCTGGCTGAAGTGATTGTTCTTGGGCAACTGAAGCACCCGAATCTTGTTAACTTGATCGAGTACTGCTGTGAAGACGATCACAGGCTTCTGGTGTACGAGTACATGGAGAGAGGCAACTTAGATCACCAGCTATTTAAACGTTATGGTGGAACCCTGCCTTGGCTAACAAGAATCAAGATAGCAATTGGAGCTGCAAAAGGCCTCAGTTGCCTCCATGAGGAAGAAAAGCCAGTCATATACCGCGATTTTAAGACTTCGAACATCTTACTGGACTTGGATTACACGGCTAAGCTGTCTGATTTCGGTCTTGCCATAGATGGCCCGGAAGGAGATGAAACACACATTACAACGCACGTCATGGGAACTCATGGCTACGCAGCTCCAGAATACGTCAAGACAGGTCATTTAACAGCAATGAGCGATGTATATGGCTTCGGCGTAGTTCTTTTGGAACTACTAACTGGTAGAAGGTCCGTGGATGAGAGCCGTCATGGTAGAGAACAGAACCTAGTGGAGTGGTCCAAACCATTTTTGAAGGATACACATAAACTTGACCGCGTGATGGATCCTAGGCTCGAGGGTCAGTACTCGACCGAAGGAGCTAGAAAAGCAGCTGCATTGGCTCACCAATGCTTGAACCACAACCCCAAATGTAGACCAACGATGAGCAGTGTGGTCAAGACCTTAGAGCCTCTTATGGACTTGACTAATGACATCCCAATCGGACCCTTTGTGTACGTTGTTCCAACTGAGGAAGAAAACAAAGTTAGTGTGCATAGGGTTGAAAGAGAGGGGCAAGCTGAGTGGGAAGTGGTGAAAAACGAGAGCAAAGGTGAAGAAAGAGTGGTGGAAACGAGGGCGAAGGGCCGCCACAGGAGACGTAAAGGTCATCGGTATAGAAATCGGATTAAATCATTGAGGTCTAGTACCGTTTATTCTGATACTGCTCTTTATAGAATTCTTGGAACTGATTTGTACTCTCCCAAATAA

Protein Analysis

457

Amino Acids

51.52

Weight (kDa)

8.72

Isoelectric Point (pI)

37.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014934)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72540
fragaria_vesca FvH4_6g34900
malus_domestica MD09G1181400.v1.1 MD17G1167600.v1.1
prunus_persica Prupe.3G039500_v2.0.a1
pyrus_communis pycom09g09900 pycom17g15930
rosa_chinensis RchiOBHm_Chr2g0145801
rosa_laevigata RLG00000020168
rosa_multiflora Rmu_sc0000473.1_g000002
rosa_roxburghii Rroxscaffold_152G00434760 Rroxscaffold_2G00100440
rosa_rugosa Rorug02G0393300
rosa_samantha Rh2AG447600 Rh2CG434500
rosa_wichuraiana Rw2G036580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 265
AasI GACNNNNNNGTC 1 cut(s) 1266
Acc36I ACCTGC 1 cut(s) 265
AccI GTMKAC 1 cut(s) 1036
AccII CGCG 2 cut(s) 624, 939
AciI CCGC 4 cut(s) 106, 622, 937, 1249
AclI AACGTT 1 cut(s) 520
AclWI GGATC 2 cut(s) 941, 954
AcsI RAATTY 2 cut(s) 169, 1338
AcuI CTGAAG 2 cut(s) 408, 431
AfaI GTAC 8 cut(s) 281, 443, 476, 482, 968, 1118, 1309, 1358
AfiI CCNNNNNNNGG 3 cut(s) 540, 598, 943
AgsI TTSAA 4 cut(s) 49, 916, 1018, 1166
AjiI CACGTC 1 cut(s) 736
AjnI CCWGG 1 cut(s) 310
AjuI GAANNNNNNNTTGG 2 cut(s) 523, 555
Alw26I GTCTC 2 cut(s) 11, 1252
AlwI GGATC 2 cut(s) 941, 954
Ama87I CYCGRG 1 cut(s) 956
AoxI GGCC 5 cut(s) 51, 308, 580, 700, 1246
ApeKI GCWGC 4 cut(s) 572, 758, 992, 995
ApoI RAATTY 2 cut(s) 169, 1338
AspA2I CCTAGG 1 cut(s) 950
AspS9I GGNCC 5 cut(s) 701, 852, 900, 1106, 1246
AsuC2I CCSGG 1 cut(s) 704
AsuHPI GGTGA 6 cut(s) 16, 269, 497, 998, 1207, 1226
AsuII TTCGAA 1 cut(s) 638
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 3 cut(s) 852, 900, 1106
AvrII CCTAGG 1 cut(s) 950
BamHI GGATCC 1 cut(s) 946
BbsI GAAGAC 1 cut(s) 459
BbvI GCAGC 4 cut(s) 559, 770, 982, 1004
BccI CCATC 3 cut(s) 350, 692, 937
BceAI ACGGC 2 cut(s) 681, 852
BcgI CGANNNNNNTGC 2 cut(s) 235, 269
BciT130I CCWGG 1 cut(s) 312
BciVI GTATCC 1 cut(s) 913
BcnI CCSGG 1 cut(s) 704
BcoDI GTCTC 2 cut(s) 11, 1252
BfaI CTAG 6 cut(s) 17, 39, 890, 951, 984, 1305
BfuAI ACCTGC 1 cut(s) 265
BfuI GTATCC 1 cut(s) 913
BisI GCNGC 5 cut(s) 573, 759, 993, 996, 1249
BlnI CCTAGG 1 cut(s) 950
BlpI GCTNAGC 2 cut(s) 324, 669
BlsI GCNGC 5 cut(s) 574, 760, 994, 997, 1250
BmcAI AGTACT 2 cut(s) 443, 968
Bme1390I CCNGG 2 cut(s) 312, 704
Bme18I GGWCC 3 cut(s) 852, 900, 1106
BmeT110I CYCGRG 1 cut(s) 956
BmgBI CACGTC 1 cut(s) 736
BmgT120I GGNCC 5 cut(s) 701, 852, 900, 1106, 1246
BmiI GGNNCC 3 cut(s) 532, 948, 1108
BmrFI CCNGG 2 cut(s) 312, 704
BpiI GAAGAC 1 cut(s) 459
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 1 cut(s) 305
Bpu1102I GCTNAGC 2 cut(s) 324, 669
Bpu14I TTCGAA 1 cut(s) 638
BpuMI CCSGG 1 cut(s) 704
BsaJI CCNNGG 3 cut(s) 539, 855, 950
Bsc4I CCNNNNNNNGG 3 cut(s) 540, 598, 943
Bse1I ACTGG 3 cut(s) 611, 654, 847
Bse3DI GCAATG 2 cut(s) 101, 801
BseBI CCWGG 1 cut(s) 312
BseDI CCNNGG 3 cut(s) 539, 855, 950
BseGI GGATG 2 cut(s) 865, 1095
BseLI CCNNNNNNNGG 3 cut(s) 540, 598, 943
BseMI GCAATG 2 cut(s) 101, 801
BseMII CTCAG 5 cut(s) 169, 338, 598, 1122, 1173
BseNI ACTGG 3 cut(s) 611, 654, 847
BseXI GCAGC 4 cut(s) 559, 770, 982, 1004
Bsh1236I CGCG 2 cut(s) 624, 939
Bsh1285I CGRYCG 1 cut(s) 975
BshFI GGCC 5 cut(s) 53, 310, 582, 702, 1248
BsiEI CGRYCG 1 cut(s) 975
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 1 cut(s) 704
BslI CCNNNNNNNGG 3 cut(s) 540, 598, 943
BsmAI GTCTC 2 cut(s) 11, 1252
BsmBI CGTCTC 1 cut(s) 1252
BsmI GAATGC 1 cut(s) 20
BsnI GGCC 5 cut(s) 53, 310, 582, 702, 1248
BsoBI CYCGRG 1 cut(s) 956
Bsp119I TTCGAA 1 cut(s) 638
Bsp1407I TGTACA 1 cut(s) 279
Bsp143I GATC 6 cut(s) 70, 160, 435, 457, 502, 946
Bsp1720I GCTNAGC 2 cut(s) 324, 669
BspACI CCGC 4 cut(s) 106, 622, 937, 1249
BspANI GGCC 5 cut(s) 53, 310, 582, 702, 1248
BspCNI CTCAG 5 cut(s) 168, 337, 597, 1123, 1174
BspFNI CGCG 2 cut(s) 624, 939
BspLI GGNNCC 3 cut(s) 532, 948, 1108
BspMI ACCTGC 1 cut(s) 265
BspPI GGATC 2 cut(s) 941, 954
BspT104I TTCGAA 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 101, 801
BsrGI TGTACA 1 cut(s) 279
BsrI ACTGG 3 cut(s) 611, 654, 847
BssECI CCNNGG 3 cut(s) 539, 855, 950
BssMI GATC 6 cut(s) 70, 160, 435, 457, 502, 946
BssT1I CCWWGG 2 cut(s) 539, 950
Bst2UI CCWGG 1 cut(s) 312
Bst4CI ACNGT 1 cut(s) 1312
BstAUI TGTACA 1 cut(s) 279
BstBI TTCGAA 1 cut(s) 638
BstC8I GCNNGC 2 cut(s) 384, 1179
BstDEI CTNAG 9 cut(s) 155, 305, 324, 499, 584, 669, 1066, 1131, 1182
BstDSI CCRYGG 1 cut(s) 855
BstENI CCTNNNNNAGG 1 cut(s) 596
BstF5I GGATG 2 cut(s) 865, 1095
BstFNI CGCG 2 cut(s) 624, 939
BstKTI GATC 6 cut(s) 73, 163, 438, 460, 505, 949
BstMAI GTCTC 2 cut(s) 11, 1252
BstMBI GATC 6 cut(s) 70, 160, 435, 457, 502, 946
BstMCI CGRYCG 1 cut(s) 975
BstMWI GCNNNNNNNGC 5 cut(s) 412, 569, 588, 989, 1001
BstNI CCWGG 1 cut(s) 312
BstSCI CCNGG 2 cut(s) 310, 702
BstUI CGCG 2 cut(s) 624, 939
BstV1I GCAGC 4 cut(s) 559, 770, 982, 1004
BstV2I GAAGAC 1 cut(s) 459
BstX2I RGATCY 1 cut(s) 946
BstYI RGATCY 1 cut(s) 946
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 5 cut(s) 53, 310, 582, 702, 1248
BtgI CCRYGG 1 cut(s) 855
BtgZI GCGATG 1 cut(s) 816
BtrI CACGTC 1 cut(s) 736
BtsCI GGATG 2 cut(s) 865, 1095
BtsI GCAGTG 1 cut(s) 1057
BtsIMutI CAGTG 2 cut(s) 163, 1057
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 2 cut(s) 384, 1179
Cfr13I GGNCC 5 cut(s) 701, 852, 900, 1106, 1246
Csp6I GTAC 8 cut(s) 280, 442, 475, 481, 967, 1117, 1308, 1357
CspCI CAANNNNNGTGG 2 cut(s) 1166, 1201
CviAII CATG 5 cut(s) 484, 596, 739, 749, 872
CviQI GTAC 8 cut(s) 280, 442, 475, 481, 967, 1117, 1308, 1357
DdeI CTNAG 9 cut(s) 155, 305, 324, 499, 584, 669, 1066, 1131, 1182
DpnI GATC 6 cut(s) 72, 162, 437, 459, 504, 948
DpnII GATC 6 cut(s) 70, 160, 435, 457, 502, 946
DraI TTTAAA 1 cut(s) 517
DrdI GACNNNNNNGTC 1 cut(s) 1266
DseDI GACNNNNNNGTC 1 cut(s) 1266
Eco130I CCWWGG 2 cut(s) 539, 950
Eco147I AGGCCT 2 cut(s) 310, 582
Eco47I GGWCC 3 cut(s) 852, 900, 1106
Eco57I CTGAAG 2 cut(s) 408, 431
Eco88I CYCGRG 1 cut(s) 956
EcoNI CCTNNNNNAGG 1 cut(s) 596
EcoRI GAATTC 1 cut(s) 1338
EcoRII CCWGG 1 cut(s) 310
EcoT14I CCWWGG 2 cut(s) 539, 950
ErhI CCWWGG 2 cut(s) 539, 950
Esp3I CGTCTC 1 cut(s) 1252
FaeI CATG 5 cut(s) 487, 599, 742, 752, 875
FatI CATG 5 cut(s) 483, 595, 738, 748, 871
FblI GTMKAC 1 cut(s) 1036
Fnu4HI GCNGC 5 cut(s) 573, 759, 993, 996, 1249
FokI GGATG 2 cut(s) 872, 1082
Fsp4HI GCNGC 5 cut(s) 573, 759, 993, 996, 1249
FspBI CTAG 6 cut(s) 17, 39, 890, 951, 984, 1305
GluI GCNGC 5 cut(s) 573, 759, 993, 996, 1249
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 5 cut(s) 53, 310, 582, 702, 1248
HapII CCGG 1 cut(s) 704
Hin1II CATG 5 cut(s) 487, 599, 742, 752, 875
HincII GTYRAC 1 cut(s) 430
HindII GTYRAC 1 cut(s) 430
HindIII AAGCTT 1 cut(s) 302
HinfI GANTC 4 cut(s) 4, 34, 421, 552
HpaI GTTAAC 1 cut(s) 430
HpaII CCGG 1 cut(s) 704
HphI GGTGA 6 cut(s) 16, 269, 497, 998, 1207, 1226
Hpy166II GTNNAC 5 cut(s) 280, 430, 475, 1037, 1117
Hpy188I TCNGA 5 cut(s) 124, 679, 1106, 1287, 1321
Hpy188III TCNNGA 6 cut(s) 10, 31, 556, 764, 775, 1060
Hpy8I GTNNAC 5 cut(s) 280, 430, 475, 1037, 1117
HpyAV CCTTC 7 cut(s) 37, 200, 701, 843, 910, 971, 1237
HpyCH4III ACNGT 1 cut(s) 1312
HpyCH4IV ACGT 6 cut(s) 86, 520, 735, 771, 1119, 1261
HpyCH4V TGCA 6 cut(s) 68, 147, 203, 575, 998, 1156
HpyF10VI GCNNNNNNNGC 5 cut(s) 412, 569, 588, 989, 1001
HpyF3I CTNAG 9 cut(s) 155, 305, 324, 499, 584, 669, 1066, 1131, 1182
HpySE526I ACGT 6 cut(s) 86, 520, 735, 771, 1119, 1261
Hsp92II CATG 5 cut(s) 487, 599, 742, 752, 875
KspAI GTTAAC 1 cut(s) 430
Kzo9I GATC 6 cut(s) 70, 160, 435, 457, 502, 946
LmnI GCTCC 4 cut(s) 211, 569, 766, 980
Lsp1109I GCAGC 4 cut(s) 559, 770, 982, 1004
MaeI CTAG 6 cut(s) 17, 39, 890, 951, 984, 1305
MaeII ACGT 6 cut(s) 86, 520, 735, 771, 1119, 1261
MaeIII GTNAC 2 cut(s) 114, 131
MalI GATC 6 cut(s) 72, 162, 437, 459, 504, 948
MboI GATC 6 cut(s) 70, 160, 435, 457, 502, 946
MboII GAAGA 4 cut(s) 464, 614, 1148, 1229
MfeI CAATTG 1 cut(s) 564
MflI RGATCY 1 cut(s) 946
MluCI AATT 3 cut(s) 169, 564, 1338
MlyI GAGTC 2 cut(s) 13, 28
MmeI TCCRAC 1 cut(s) 1151
MseI TTAA 7 cut(s) 216, 339, 429, 516, 630, 788, 1290
MslI CAYNNNNRTG 1 cut(s) 142
MspA1I CMGCKG 1 cut(s) 995
MspI CCGG 1 cut(s) 704
MspR9I CCNGG 2 cut(s) 312, 704
MunI CAATTG 1 cut(s) 564
Mva1269I GAATGC 1 cut(s) 20
MvaI CCWGG 1 cut(s) 312
MvnI CGCG 2 cut(s) 624, 939
MwoI GCNNNNNNNGC 5 cut(s) 412, 569, 588, 989, 1001
NciI CCSGG 1 cut(s) 704
NdeII GATC 6 cut(s) 70, 160, 435, 457, 502, 946
NlaIII CATG 5 cut(s) 487, 599, 742, 752, 875
NlaIV GGNNCC 3 cut(s) 532, 948, 1108
NmuCI GTSAC 1 cut(s) 114
NspV TTCGAA 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 956
PaqCI CACCTGC 1 cut(s) 265
PceI AGGCCT 2 cut(s) 310, 582
PctI GAATGC 1 cut(s) 20
PfeI GAWTC 2 cut(s) 421, 552
PkrI GCNGC 5 cut(s) 574, 760, 994, 997, 1250
PleI GAGTC 2 cut(s) 12, 28
PpsI GAGTC 2 cut(s) 12, 28
Psp1406I AACGTT 1 cut(s) 520
Psp6I CCWGG 1 cut(s) 310
PspGI CCWGG 1 cut(s) 310
PspN4I GGNNCC 3 cut(s) 532, 948, 1108
PspPI GGNCC 5 cut(s) 701, 852, 900, 1106, 1246
PspXI VCTCGAGB 1 cut(s) 956
PsuI RGATCY 1 cut(s) 946
PvuII CAGCTG 1 cut(s) 995
RsaI GTAC 8 cut(s) 281, 443, 476, 482, 968, 1118, 1309, 1358
RsaNI GTAC 8 cut(s) 280, 442, 475, 481, 967, 1117, 1308, 1357
RseI CAYNNNNRTG 1 cut(s) 142
SaqAI TTAA 7 cut(s) 216, 339, 429, 516, 630, 788, 1290
SatI GCNGC 5 cut(s) 573, 759, 993, 996, 1249
Sau3AI GATC 6 cut(s) 70, 160, 435, 457, 502, 946
Sau96I GGNCC 5 cut(s) 701, 852, 900, 1106, 1246
ScaI AGTACT 2 cut(s) 443, 968
SchI GAGTC 2 cut(s) 13, 28
ScrFI CCNGG 2 cut(s) 312, 704
Sfr274I CTCGAG 1 cut(s) 956
SfuI TTCGAA 1 cut(s) 638
SinI GGWCC 3 cut(s) 852, 900, 1106
SlaI CTCGAG 1 cut(s) 956
SmiMI CAYNNNNRTG 1 cut(s) 142
SmlI CTYRAG 2 cut(s) 8, 956
SmoI CTYRAG 2 cut(s) 8, 956
Sse9I AATT 3 cut(s) 169, 564, 1338
SseBI AGGCCT 2 cut(s) 310, 582
SsiI CCGC 4 cut(s) 106, 622, 937, 1249
SspMI CTAG 6 cut(s) 17, 39, 890, 951, 984, 1305
StuI AGGCCT 2 cut(s) 310, 582
StyD4I CCNGG 2 cut(s) 310, 702
StyI CCWWGG 2 cut(s) 539, 950
TaaI ACNGT 1 cut(s) 1312
TaiI ACGT 6 cut(s) 89, 523, 738, 774, 1122, 1264
TaqI TCGA 4 cut(s) 438, 638, 957, 971
TaqII GACCGA 2 cut(s) 674, 989
TasI AATT 3 cut(s) 169, 564, 1338
TatI WGTACW 5 cut(s) 279, 441, 480, 966, 1356
TauI GCSGC 1 cut(s) 1251
TfiI GAWTC 2 cut(s) 421, 552
Tru1I TTAA 7 cut(s) 216, 339, 429, 516, 630, 788, 1290
Tru9I TTAA 7 cut(s) 216, 339, 429, 516, 630, 788, 1290
TscAI CASTG 2 cut(s) 163, 1057
TseFI GTSAC 1 cut(s) 114
TseI GCWGC 4 cut(s) 572, 758, 992, 995
Tsp45I GTSAC 1 cut(s) 114
TspDTI ATGAA 3 cut(s) 182, 280, 729
TspGWI ACGGA 1 cut(s) 844
TspRI CASTG 2 cut(s) 163, 1057
VpaK11BI GGWCC 3 cut(s) 852, 900, 1106
XagI CCTNNNNNAGG 1 cut(s) 596
XapI RAATTY 2 cut(s) 169, 1338
XhoI CTCGAG 1 cut(s) 956
XmaJI CCTAGG 1 cut(s) 950
XmiI GTMKAC 1 cut(s) 1036
XspI CTAG 6 cut(s) 17, 39, 890, 951, 984, 1305
ZrmI AGTACT 2 cut(s) 443, 968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.