FvH4_6g34900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
27580173 .. 27581929
1757 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g34900.t1

Sequence Viewer

Length: 1353 bp
ATGAGGTTCAAAAAACTAGCCACCAACTTCTTCACACCTACTTGTTTCAAGGCCAATAGCCATACATCAGAACATAAATCCCAGTTATCATCCAAAGAGAGCACTATTTCGCGCAGATTATCACTTTCAGATTTGAGTAATTCATCAATCTGCACTGTCCTGAGTGACATATCAAACTCGCTTATCGGATCAAATCTTCATATTTTTGCTCACAATGAGCTCAAAAAGATCACTAAAAGCTTTTCCAAGAGCAACTATCTTGGAGAAGGCGGGTTCGGGAAAGTGTACAAAGGGTTTGTTGATGACAAGCTTAGGCCTGGCTTGGAAGCTCAACCTGTTGCTGTTAAGGTTTTGGACTTGGATGGCACGCAAGGTCATAGAGAGTGGCTGGCTGAAGTGATTTTTCTCGGGCAATTGAAGCACCCAAATCTTGTAAACTTGATTGGTTACTGCTGTGAAGATGAACATAGGCTTCTTGTGTATGAATACCTGGAAAGAGGAAACTTAGACCACAAACTATTCAAATGTTATTCTGGAACTTTGCCTTGGTTGACAAGAATCAAAATAGCAATTGGAGCTGCTAAAGGCCTCAGTTGCCTCCATGAGGAAGAAAAGCCAATTATATATAGAGATTTCAAAGCTTCAAACATCTTGCTAGACTGTGATTACACAGCTAAGCTCTCTGATTTGGGTCTAGCTATAGATGGCCCGGAAGGTGATGAAACACATGTCACAACGCGCGTCATGGGTACTCATGGCTATGCAGCTCCAGAATACATCATGACAGGTCATCTAACAACAATGAGCGATGTCTATAGCTTCGGTGTAGTTCTTTTAGAGCTTCTAACGGGTAGAAGATCCATGGATGAGAGCCGGACTTTTAGAGAACAGAATCTAGTGGAGTGGGCCAAGCCATTTTTGAAGGACTCCCACAAACTTGACCGTGTGATGGACCAAAGACTTGAGGGTCAGTACTCCACCGAAGGGGCTAGAAAGGCAGCTGCATTGGCTCATCAATGCCTGAGCCATAACCCCAAGTCTAGACCAACAATGAGCACTGTGATCAAGACCTTAGAGCCTCTAATGAACTTGAAGGACATACCAATCGGACCCTTTGTGTATGTTGTGCCAACTGAATCAGGAAAAGAAGGTCAAACCGGGTGTCATGATATGGTGAAAAATGACAACAAAGGTGAAGAAAAAGAGGGAGGGTTGGAGAAGGTGAAGGGCAGCCACCGGAGACGAAAAGGTCAGAGGCATAAGCATCGGATCAAGTCACTGAAGTCTAGTACTGTCTATTCGGATACTGCTCTATATAAAGTTCTCGGAACTGGTTTATACTCTCCCAGATGA

Protein Analysis

451

Amino Acids

50.44

Weight (kDa)

8.97

Isoelectric Point (pI)

28.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 82 - 356 1.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 84 - 358 5.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014934)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72540
fragaria_vesca FvH4_6g34900
malus_domestica MD09G1181400.v1.1 MD17G1167600.v1.1
prunus_persica Prupe.3G039500_v2.0.a1
pyrus_communis pycom09g09900 pycom17g15930
rosa_chinensis RchiOBHm_Chr2g0145801
rosa_laevigata RLG00000020168
rosa_multiflora Rmu_sc0000473.1_g000002
rosa_roxburghii Rroxscaffold_152G00434760 Rroxscaffold_2G00100440
rosa_rugosa Rorug02G0393300
rosa_samantha Rh2AG447600 Rh2CG434500
rosa_wichuraiana Rw2G036580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 966, 1248
AccII CGCG 3 cut(s) 112, 739, 741
AciI CCGC 1 cut(s) 270
AclWI GGATC 3 cut(s) 196, 852, 1277
AcuI CTGAAG 2 cut(s) 414, 1301
AfaI GTAC 4 cut(s) 287, 751, 974, 1291
AfiI CCNNNNNNNGG 3 cut(s) 604, 949, 984
AflIII ACRYGT 1 cut(s) 727
AgsI TTSAA 8 cut(s) 10, 49, 418, 523, 637, 645, 922, 1093
AjnI CCWGG 2 cut(s) 316, 489
AjuI GAANNNNNNNTTGG 2 cut(s) 529, 561
Alw21I GWGCWC 3 cut(s) 104, 222, 1058
Alw26I GTCTC 1 cut(s) 1234
AlwI GGATC 3 cut(s) 196, 852, 1277
Ama87I CYCGRG 1 cut(s) 407
AoxI GGCC 5 cut(s) 51, 314, 586, 706, 906
ApeKI GCWGC 5 cut(s) 578, 764, 998, 1001, 1230
ArsI GACNNNNNNTTYG 2 cut(s) 1147, 1179
AspLEI GCGC 2 cut(s) 114, 741
AspS9I GGNCC 4 cut(s) 707, 906, 952, 1109
AsuC2I CCSGG 2 cut(s) 710, 1159
AsuHPI GGTGA 4 cut(s) 728, 1186, 1205, 1234
AvaI CYCGRG 1 cut(s) 407
AvaII GGWCC 2 cut(s) 952, 1109
BanII GRGCYC 1 cut(s) 222
Bbv12I GWGCWC 3 cut(s) 104, 222, 1058
BbvI GCAGC 5 cut(s) 565, 776, 988, 1010, 1242
BccI CCATC 3 cut(s) 356, 698, 943
BcgI CGANNNNNNTGC 2 cut(s) 1247, 1281
BciT130I CCWGG 2 cut(s) 318, 491
BciVI GTATCC 1 cut(s) 1297
BclI TGATCA 1 cut(s) 1062
BcnI CCSGG 2 cut(s) 710, 1159
BcoDI GTCTC 1 cut(s) 1234
BfaI CTAG 7 cut(s) 17, 656, 695, 896, 990, 1041, 1287
BfmI CTRYAG 2 cut(s) 699, 814
BfuI GTATCC 1 cut(s) 1297
BisI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
BlpI GCTNAGC 1 cut(s) 675
BlsI GCNGC 5 cut(s) 580, 766, 1000, 1003, 1232
BmcAI AGTACT 2 cut(s) 974, 1291
Bme1390I CCNGG 4 cut(s) 318, 491, 710, 1159
Bme18I GGWCC 2 cut(s) 952, 1109
BmeT110I CYCGRG 1 cut(s) 407
BmgT120I GGNCC 4 cut(s) 707, 906, 952, 1109
BmiI GGNNCC 1 cut(s) 1111
BmrFI CCNGG 4 cut(s) 318, 491, 710, 1159
BmrI ACTGGG 1 cut(s) 76
BmsI GCATC 1 cut(s) 1273
BmuI ACTGGG 1 cut(s) 76
BpmI CTGGAG 1 cut(s) 753
Bpu10I CCTNAGC 2 cut(s) 311, 1022
Bpu1102I GCTNAGC 1 cut(s) 675
BpuEI CTTGAG 1 cut(s) 983
BpuMI CCSGG 2 cut(s) 710, 1159
BsaJI CCNNGG 2 cut(s) 545, 861
BsaWI WCCGGW 1 cut(s) 1236
Bsc4I CCNNNNNNNGG 3 cut(s) 604, 949, 984
Bse1I ACTGG 2 cut(s) 82, 1336
BseBI CCWGG 2 cut(s) 318, 491
BseDI CCNNGG 2 cut(s) 545, 861
BseGI GGATG 3 cut(s) 89, 367, 871
BseLI CCNNNNNNNGG 3 cut(s) 604, 949, 984
BseMII CTCAG 3 cut(s) 152, 604, 1013
BseNI ACTGG 2 cut(s) 82, 1336
BseXI GCAGC 5 cut(s) 565, 776, 988, 1010, 1242
BsgI GTGCAG 1 cut(s) 136
Bsh1236I CGCG 3 cut(s) 112, 739, 741
BshFI GGCC 5 cut(s) 53, 316, 588, 708, 908
BsiHKAI GWGCWC 3 cut(s) 104, 222, 1058
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 4 cut(s) 710, 874, 1158, 1237
BslI CCNNNNNNNGG 3 cut(s) 604, 949, 984
BsmAI GTCTC 1 cut(s) 1234
BsmBI CGTCTC 1 cut(s) 1234
BsnI GGCC 5 cut(s) 53, 316, 588, 708, 908
BsoBI CYCGRG 1 cut(s) 407
Bsp1286I GDGCHC 3 cut(s) 104, 222, 1058
Bsp1407I TGTACA 1 cut(s) 285
Bsp143I GATC 5 cut(s) 188, 228, 857, 1062, 1269
Bsp1720I GCTNAGC 1 cut(s) 675
Bsp19I CCATGG 1 cut(s) 861
BspACI CCGC 1 cut(s) 270
BspANI GGCC 5 cut(s) 53, 316, 588, 708, 908
BspCNI CTCAG 3 cut(s) 153, 603, 1014
BspFNI CGCG 3 cut(s) 112, 739, 741
BspHI TCATGA 2 cut(s) 780, 1165
BspLI GGNNCC 1 cut(s) 1111
BspPI GGATC 3 cut(s) 196, 852, 1277
BsrGI TGTACA 1 cut(s) 285
BsrI ACTGG 2 cut(s) 82, 1336
BssECI CCNNGG 2 cut(s) 545, 861
BssMI GATC 5 cut(s) 188, 228, 857, 1062, 1269
BssT1I CCWWGG 2 cut(s) 545, 861
Bst2UI CCWGG 2 cut(s) 318, 491
Bst4CI ACNGT 5 cut(s) 157, 662, 944, 1060, 1294
BstAUI TGTACA 1 cut(s) 285
BstC8I GCNNGC 2 cut(s) 368, 390
BstDEI CTNAG 7 cut(s) 161, 311, 505, 590, 675, 1022, 1072
BstDSI CCRYGG 1 cut(s) 861
BstENI CCTNNNNNAGG 1 cut(s) 602
BstF5I GGATG 3 cut(s) 89, 367, 871
BstFNI CGCG 3 cut(s) 112, 739, 741
BstHHI GCGC 2 cut(s) 114, 741
BstKTI GATC 5 cut(s) 191, 231, 860, 1065, 1272
BstMAI GTCTC 1 cut(s) 1234
BstMBI GATC 5 cut(s) 188, 228, 857, 1062, 1269
BstMWI GCNNNNNNNGC 5 cut(s) 418, 575, 594, 995, 1007
BstNI CCWGG 2 cut(s) 318, 491
BstNSI RCATGY 1 cut(s) 731
BstSCI CCNGG 4 cut(s) 316, 489, 708, 1157
BstSFI CTRYAG 2 cut(s) 699, 814
BstUI CGCG 3 cut(s) 112, 739, 741
BstV1I GCAGC 5 cut(s) 565, 776, 988, 1010, 1242
BstX2I RGATCY 1 cut(s) 857
BstYI RGATCY 1 cut(s) 857
BsuI GTATCC 1 cut(s) 1297
BsuRI GGCC 5 cut(s) 53, 316, 588, 708, 908
BtgI CCRYGG 1 cut(s) 861
BtgZI GCGATG 1 cut(s) 822
BtsCI GGATG 3 cut(s) 89, 367, 871
BtsIMutI CAGTG 3 cut(s) 153, 1056, 1277
Cac8I GCNNGC 2 cut(s) 368, 390
CciI TCATGA 2 cut(s) 780, 1165
CfoI GCGC 2 cut(s) 114, 741
Cfr13I GGNCC 4 cut(s) 707, 906, 952, 1109
CseI GACGC 1 cut(s) 730
Csp6I GTAC 4 cut(s) 286, 750, 973, 1290
CviAII CATG 7 cut(s) 602, 728, 745, 755, 781, 862, 1166
CviQI GTAC 4 cut(s) 286, 750, 973, 1290
DdeI CTNAG 7 cut(s) 161, 311, 505, 590, 675, 1022, 1072
DpnI GATC 5 cut(s) 190, 230, 859, 1064, 1271
DpnII GATC 5 cut(s) 188, 228, 857, 1062, 1269
DrdI GACNNNNNNGTC 2 cut(s) 966, 1248
DseDI GACNNNNNNGTC 2 cut(s) 966, 1248
Ecl136II GAGCTC 1 cut(s) 220
Eco130I CCWWGG 2 cut(s) 545, 861
Eco147I AGGCCT 2 cut(s) 316, 588
Eco24I GRGCYC 1 cut(s) 222
Eco47I GGWCC 2 cut(s) 952, 1109
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 2 cut(s) 414, 1301
Eco88I CYCGRG 1 cut(s) 407
EcoICRI GAGCTC 1 cut(s) 220
EcoNI CCTNNNNNAGG 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 316, 489
EcoT14I CCWWGG 2 cut(s) 545, 861
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 2 cut(s) 545, 861
Esp3I CGTCTC 1 cut(s) 1234
FaeI CATG 7 cut(s) 605, 731, 748, 758, 784, 865, 1169
FatI CATG 7 cut(s) 601, 727, 744, 754, 780, 861, 1165
FauI CCCGC 1 cut(s) 263
FbaI TGATCA 1 cut(s) 1062
Fnu4HI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
FokI GGATG 3 cut(s) 76, 374, 878
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
FspBI CTAG 7 cut(s) 17, 656, 695, 896, 990, 1041, 1287
GlaI GCGC 2 cut(s) 113, 740
GluI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
GsuI CTGGAG 1 cut(s) 753
HaeIII GGCC 5 cut(s) 53, 316, 588, 708, 908
HapII CCGG 4 cut(s) 710, 874, 1158, 1237
HgaI GACGC 1 cut(s) 730
HhaI GCGC 2 cut(s) 114, 741
Hin1II CATG 7 cut(s) 605, 731, 748, 758, 784, 865, 1169
Hin6I GCGC 2 cut(s) 112, 739
HinP1I GCGC 2 cut(s) 112, 739
HincII GTYRAC 1 cut(s) 552
HindII GTYRAC 1 cut(s) 552
HindIII AAGCTT 3 cut(s) 238, 308, 639
HinfI GANTC 4 cut(s) 558, 892, 926, 1136
HpaII CCGG 4 cut(s) 710, 874, 1158, 1237
HphI GGTGA 4 cut(s) 728, 1186, 1205, 1234
Hpy166II GTNNAC 3 cut(s) 286, 436, 552
Hpy188I TCNGA 9 cut(s) 70, 130, 188, 685, 1109, 1254, 1269, 1303, 1328
Hpy188III TCNNGA 9 cut(s) 160, 277, 534, 770, 781, 1041, 1066, 1140, 1166
Hpy8I GTNNAC 3 cut(s) 286, 436, 552
HpyAV CCTTC 8 cut(s) 260, 707, 916, 977, 1087, 1142, 1213, 1219
HpyCH4III ACNGT 5 cut(s) 157, 662, 944, 1060, 1294
HpyCH4V TGCA 3 cut(s) 153, 764, 1004
HpyF10VI GCNNNNNNNGC 5 cut(s) 418, 575, 594, 995, 1007
HpyF3I CTNAG 7 cut(s) 161, 311, 505, 590, 675, 1022, 1072
Hsp92II CATG 7 cut(s) 605, 731, 748, 758, 784, 865, 1169
HspAI GCGC 2 cut(s) 112, 739
Ksp22I TGATCA 1 cut(s) 1062
Kzo9I GATC 5 cut(s) 188, 228, 857, 1062, 1269
LmnI GCTCC 2 cut(s) 575, 772
Lsp1109I GCAGC 5 cut(s) 565, 776, 988, 1010, 1242
LweI GCATC 1 cut(s) 1273
MaeI CTAG 7 cut(s) 17, 656, 695, 896, 990, 1041, 1287
MaeIII GTNAC 4 cut(s) 164, 446, 730, 1275
MalI GATC 5 cut(s) 190, 230, 859, 1064, 1271
MboI GATC 5 cut(s) 188, 228, 857, 1062, 1269
MboII GAAGA 6 cut(s) 22, 188, 470, 620, 867, 1208
MfeI CAATTG 2 cut(s) 413, 570
MflI RGATCY 1 cut(s) 857
MhlI GDGCHC 3 cut(s) 104, 222, 1058
MluCI AATT 4 cut(s) 139, 413, 570, 618
MlyI GAGTC 1 cut(s) 920
MmeI TCCRAC 1 cut(s) 1194
MnlI CCTC 9 cut(s) 491, 598, 599, 608, 958, 1089, 1198, 1202, 1248
MseI TTAA 1 cut(s) 345
MslI CAYNNNNRTG 1 cut(s) 759
MspA1I CMGCKG 1 cut(s) 1001
MspI CCGG 4 cut(s) 710, 874, 1158, 1237
MspR9I CCNGG 4 cut(s) 318, 491, 710, 1159
MunI CAATTG 2 cut(s) 413, 570
MvaI CCWGG 2 cut(s) 318, 491
MvnI CGCG 3 cut(s) 112, 739, 741
MwoI GCNNNNNNNGC 5 cut(s) 418, 575, 594, 995, 1007
NciI CCSGG 2 cut(s) 710, 1159
NcoI CCATGG 1 cut(s) 861
NdeII GATC 5 cut(s) 188, 228, 857, 1062, 1269
NlaIII CATG 7 cut(s) 605, 731, 748, 758, 784, 865, 1169
NlaIV GGNNCC 1 cut(s) 1111
NmuCI GTSAC 3 cut(s) 164, 730, 1275
NspI RCATGY 1 cut(s) 731
PagI TCATGA 2 cut(s) 780, 1165
PceI AGGCCT 2 cut(s) 316, 588
PciI ACATGT 1 cut(s) 727
PfeI GAWTC 3 cut(s) 558, 892, 1136
PkrI GCNGC 5 cut(s) 580, 766, 1000, 1003, 1232
PleI GAGTC 1 cut(s) 920
PpsI GAGTC 1 cut(s) 920
PscI ACATGT 1 cut(s) 727
Psp124BI GAGCTC 1 cut(s) 222
Psp6I CCWGG 2 cut(s) 316, 489
PspGI CCWGG 2 cut(s) 316, 489
PspN4I GGNNCC 1 cut(s) 1111
PspPI GGNCC 4 cut(s) 707, 906, 952, 1109
PsuI RGATCY 1 cut(s) 857
PvuII CAGCTG 1 cut(s) 1001
RsaI GTAC 4 cut(s) 287, 751, 974, 1291
RsaNI GTAC 4 cut(s) 286, 750, 973, 1290
RseI CAYNNNNRTG 1 cut(s) 759
SacI GAGCTC 1 cut(s) 222
SaqAI TTAA 1 cut(s) 345
SatI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
Sau3AI GATC 5 cut(s) 188, 228, 857, 1062, 1269
Sau96I GGNCC 4 cut(s) 707, 906, 952, 1109
ScaI AGTACT 2 cut(s) 974, 1291
SchI GAGTC 1 cut(s) 920
ScrFI CCNGG 4 cut(s) 318, 491, 710, 1159
SduI GDGCHC 3 cut(s) 104, 222, 1058
SfaNI GCATC 1 cut(s) 1273
SfcI CTRYAG 2 cut(s) 699, 814
SinI GGWCC 2 cut(s) 952, 1109
SmiMI CAYNNNNRTG 1 cut(s) 759
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse9I AATT 4 cut(s) 139, 413, 570, 618
SseBI AGGCCT 2 cut(s) 316, 588
SsiI CCGC 1 cut(s) 270
SspMI CTAG 7 cut(s) 17, 656, 695, 896, 990, 1041, 1287
SstI GAGCTC 1 cut(s) 222
StuI AGGCCT 2 cut(s) 316, 588
StyD4I CCNGG 4 cut(s) 316, 489, 708, 1157
StyI CCWWGG 2 cut(s) 545, 861
TaaI ACNGT 5 cut(s) 157, 662, 944, 1060, 1294
TasI AATT 4 cut(s) 139, 413, 570, 618
TatI WGTACW 3 cut(s) 285, 972, 1289
TfiI GAWTC 3 cut(s) 558, 892, 1136
Tru1I TTAA 1 cut(s) 345
Tru9I TTAA 1 cut(s) 345
TscAI CASTG 3 cut(s) 160, 1063, 1284
TseFI GTSAC 3 cut(s) 164, 730, 1275
TseI GCWGC 5 cut(s) 578, 764, 998, 1001, 1230
Tsp45I GTSAC 3 cut(s) 164, 730, 1275
TspDTI ATGAA 6 cut(s) 132, 188, 477, 498, 735, 1100
TspRI CASTG 3 cut(s) 160, 1063, 1284
VpaK11BI GGWCC 2 cut(s) 952, 1109
XagI CCTNNNNNAGG 1 cut(s) 602
XbaI TCTAGA 1 cut(s) 1040
XceI RCATGY 1 cut(s) 731
XspI CTAG 7 cut(s) 17, 656, 695, 896, 990, 1041, 1287
ZrmI AGTACT 2 cut(s) 974, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.