Rh2AG447600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
66092662 .. 66094683
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG447600.1

Sequence Viewer

Length: 1353 bp
ATGAGGTTCAAAAAACTAGCCACCAACTTCTTCACACCTACTTGTTTCAAGGCCAAAAGCCAGACATCAGAACATAAATCCCAGTTATCATCCAAAGAGATCACTATTTCGCGTAGATTGTCACTTTCGGATGTGAGCAATTCATCAATCTGCACTGTCCTCAGTGACATATCAAATTCGCTTATCGGATCAAATCTTCATATCTTTGCCCACAATGAGCTCGAAAAGATCACTCAAAGCTTTTCTAAGAGCAATTATCTTGGAGAAGGCGGGTTTGGGAAAGTGTACAAAGGGTTTGTTGATGACAAGCTTAGGCCTGGCTTGGAAGCTCAACCTGTTGCTGTTAAGGTTTTGGATTTGGATGGCACGCAAGGTCATAGGGAGTGGCTGGCTGAAGTGATTTTTCTTGGGCAATTGAAGCACCCTAATCTTGTGAACTTGATTGGGTACTGCTGTGAAGATGAACATAGGCTTCTCGTCTATGAATACATGGAGAGAGGCAACTTAGACAACAAACTATTCAAATGTTATTCTGGAACCTTGCCTTGGTTGACAAGAGTCAAAATAGCAATTGGAGCTGCTAAAGGCCTCAGTTTCCTCCATGAGGAAGAAAAGCCAGTCATATATAGAGATTTCAAGGCTTCAAATATCCTACTAGACTGTGATTACACAGCTAAGCTCTCTGATTTCGGTCTAGCTATAGATGGCCCGGAAGGCGGTGAAACACATGTCACAACGCATGTCATGGGTACTCATGGCTATGCAGCTCCAGAATACATCATGACAGGTCATTTAACAACAATGAGCGACGTCTATAGCTTCGGTGTAGTTCTTTTAGAGCTTCTAGCAGGTAGAAGATCCATGGATGAGAGCCGTACTTTTAGAGAACAGAACCTAGTGGAGTGGGCCAAGCCATTTTTGAAGGACTCGCACAAACTTGACCGTGTAATGGACCAAAGACTCGAGGGTCAGTACTCTACCGAAGGGGCTAAAAAGGCGGCTGCATTGGCTCATCAGTGCCTGAGTCATAACCCCAAGTCTAGACCAACAATGAGCACTGTGGTCAAGACTTTAGAGCCTCTAATGAACTTGAATGACATACCGATCGGACCCTTTGTGTATATTGTTCCAACTGAATCAGGAAAAGAAGATCAAATTGGGTGTCATGATAAGGTAAAAAATGACAACAAAGGTGAAGTAAAAGAGGGAGGGTTGGAGAAATTGAAGGGCAGCCACCGGAGACGAAAAGGTCAGAGGCATAGGCATCGGATTAAGCCACTGAAGTCTAGTACTGTCTTTTCGGATACTGCTCTATACAAAGTTCTCGGAACTGGTTTATACTCTCCCAGATGA

Protein Analysis

450

Amino Acids

50.43

Weight (kDa)

8.87

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 82 - 356 1.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 84 - 358 2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014934)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72540
fragaria_vesca FvH4_6g34900
malus_domestica MD09G1181400.v1.1 MD17G1167600.v1.1
prunus_persica Prupe.3G039500_v2.0.a1
pyrus_communis pycom09g09900 pycom17g15930
rosa_chinensis RchiOBHm_Chr2g0145801
rosa_laevigata RLG00000020168
rosa_multiflora Rmu_sc0000473.1_g000002
rosa_roxburghii Rroxscaffold_152G00434760 Rroxscaffold_2G00100440
rosa_rugosa Rorug02G0393300
rosa_samantha Rh2AG447600 Rh2CG434500
rosa_wichuraiana Rw2G036580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 966, 1248
AatII GACGTC 1 cut(s) 813
Acc36I ACCTGC 1 cut(s) 839
AccII CGCG 1 cut(s) 112
AciI CCGC 3 cut(s) 270, 717, 998
AclWI GGATC 2 cut(s) 196, 852
AcsI RAATTY 1 cut(s) 175
AcuI CTGAAG 2 cut(s) 414, 1301
AcyI GRCGYC 1 cut(s) 810
AfaI GTAC 6 cut(s) 287, 449, 751, 877, 974, 1291
AfiI CCNNNNNNNGG 4 cut(s) 546, 604, 716, 949
AflIII ACRYGT 1 cut(s) 727
AgsI TTSAA 9 cut(s) 10, 49, 418, 523, 637, 645, 922, 1093, 1225
AjnI CCWGG 1 cut(s) 316
AjuI GAANNNNNNNTTGG 6 cut(s) 258, 290, 529, 561, 1140, 1172
Alw21I GWGCWC 2 cut(s) 222, 1058
Alw26I GTCTC 1 cut(s) 1234
AlwI GGATC 2 cut(s) 196, 852
AlwNI CAGNNNCTG 1 cut(s) 1021
Ama87I CYCGRG 1 cut(s) 962
AoxI GGCC 5 cut(s) 51, 314, 586, 706, 906
ApeKI GCWGC 4 cut(s) 578, 764, 1001, 1230
ApoI RAATTY 1 cut(s) 175
ArsI GACNNNNNNTTYG 2 cut(s) 1147, 1179
AspS9I GGNCC 4 cut(s) 707, 906, 952, 1109
AsuC2I CCSGG 1 cut(s) 710
AsuHPI GGTGA 2 cut(s) 731, 1205
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 2 cut(s) 952, 1109
BaeI ACNNNNGTAYC 2 cut(s) 439, 472
BanII GRGCYC 1 cut(s) 222
Bbv12I GWGCWC 2 cut(s) 222, 1058
BbvI GCAGC 4 cut(s) 565, 776, 988, 1242
BccI CCATC 2 cut(s) 356, 698
BceAI ACGGC 1 cut(s) 858
BcgI CGANNNNNNTGC 2 cut(s) 1247, 1281
BciT130I CCWGG 1 cut(s) 318
BciVI GTATCC 1 cut(s) 1297
BcnI CCSGG 1 cut(s) 710
BcoDI GTCTC 1 cut(s) 1234
BfaI CTAG 7 cut(s) 17, 656, 695, 845, 896, 1041, 1287
BfmI CTRYAG 2 cut(s) 699, 814
BfuAI ACCTGC 1 cut(s) 839
BfuI GTATCC 1 cut(s) 1297
BglI GCCNNNNNGGC 1 cut(s) 714
BisI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
BlpI GCTNAGC 1 cut(s) 675
BlsI GCNGC 5 cut(s) 580, 766, 1000, 1003, 1232
BmcAI AGTACT 2 cut(s) 974, 1291
Bme1390I CCNGG 2 cut(s) 318, 710
Bme18I GGWCC 2 cut(s) 952, 1109
BmeT110I CYCGRG 1 cut(s) 962
BmgT120I GGNCC 4 cut(s) 707, 906, 952, 1109
BmiI GGNNCC 2 cut(s) 538, 1111
BmrFI CCNGG 2 cut(s) 318, 710
BmrI ACTGGG 1 cut(s) 76
BmsI GCATC 1 cut(s) 1273
BmuI ACTGGG 1 cut(s) 76
BoxI GACNNNNGTC 1 cut(s) 557
BpmI CTGGAG 1 cut(s) 753
Bpu10I CCTNAGC 1 cut(s) 311
Bpu1102I GCTNAGC 1 cut(s) 675
BpuMI CCSGG 1 cut(s) 710
BsaHI GRCGYC 1 cut(s) 810
BsaJI CCNNGG 2 cut(s) 545, 861
BsaWI WCCGGW 1 cut(s) 1236
Bsc4I CCNNNNNNNGG 4 cut(s) 546, 604, 716, 949
Bse1I ACTGG 3 cut(s) 82, 617, 1336
BseBI CCWGG 1 cut(s) 318
BseDI CCNNGG 2 cut(s) 545, 861
BseGI GGATG 4 cut(s) 89, 136, 367, 871
BseLI CCNNNNNNNGG 4 cut(s) 546, 604, 716, 949
BseMII CTCAG 3 cut(s) 175, 604, 1013
BseNI ACTGG 3 cut(s) 82, 617, 1336
BseXI GCAGC 4 cut(s) 565, 776, 988, 1242
BsgI GTGCAG 1 cut(s) 136
Bsh1236I CGCG 1 cut(s) 112
Bsh1285I CGRYCG 1 cut(s) 1107
BshFI GGCC 5 cut(s) 53, 316, 588, 708, 908
BsiEI CGRYCG 1 cut(s) 1107
BsiHKAI GWGCWC 2 cut(s) 222, 1058
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 2 cut(s) 710, 1237
BslI CCNNNNNNNGG 4 cut(s) 546, 604, 716, 949
BsmAI GTCTC 1 cut(s) 1234
BsmBI CGTCTC 1 cut(s) 1234
BsnI GGCC 5 cut(s) 53, 316, 588, 708, 908
BsoBI CYCGRG 1 cut(s) 962
Bsp1286I GDGCHC 2 cut(s) 222, 1058
Bsp1407I TGTACA 1 cut(s) 285
Bsp143I GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
Bsp1720I GCTNAGC 1 cut(s) 675
Bsp19I CCATGG 1 cut(s) 861
BspACI CCGC 3 cut(s) 270, 717, 998
BspANI GGCC 5 cut(s) 53, 316, 588, 708, 908
BspCNI CTCAG 3 cut(s) 174, 603, 1014
BspFNI CGCG 1 cut(s) 112
BspHI TCATGA 2 cut(s) 780, 1165
BspLI GGNNCC 2 cut(s) 538, 1111
BspMI ACCTGC 1 cut(s) 839
BspPI GGATC 2 cut(s) 196, 852
BsrGI TGTACA 1 cut(s) 285
BsrI ACTGG 3 cut(s) 82, 617, 1336
BssECI CCNNGG 2 cut(s) 545, 861
BssMI GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
BssNI GRCGYC 1 cut(s) 810
BssT1I CCWWGG 2 cut(s) 545, 861
Bst2UI CCWGG 1 cut(s) 318
Bst4CI ACNGT 5 cut(s) 157, 662, 944, 1060, 1294
BstACI GRCGYC 1 cut(s) 810
BstAUI TGTACA 1 cut(s) 285
BstC8I GCNNGC 2 cut(s) 368, 390
BstDEI CTNAG 7 cut(s) 161, 246, 311, 505, 590, 675, 1022
BstDSI CCRYGG 1 cut(s) 861
BstENI CCTNNNNNAGG 1 cut(s) 602
BstF5I GGATG 4 cut(s) 89, 136, 367, 871
BstFNI CGCG 1 cut(s) 112
BstKTI GATC 6 cut(s) 102, 191, 231, 860, 1107, 1153
BstMAI GTCTC 1 cut(s) 1234
BstMBI GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
BstMCI CGRYCG 1 cut(s) 1107
BstMWI GCNNNNNNNGC 5 cut(s) 418, 575, 714, 995, 1007
BstNI CCWGG 1 cut(s) 318
BstNSI RCATGY 2 cut(s) 731, 743
BstPAI GACNNNNGTC 1 cut(s) 557
BstSCI CCNGG 2 cut(s) 316, 708
BstSFI CTRYAG 2 cut(s) 699, 814
BstUI CGCG 1 cut(s) 112
BstV1I GCAGC 4 cut(s) 565, 776, 988, 1242
BstX2I RGATCY 1 cut(s) 857
BstYI RGATCY 1 cut(s) 857
BsuI GTATCC 1 cut(s) 1297
BsuRI GGCC 5 cut(s) 53, 316, 588, 708, 908
BtgI CCRYGG 1 cut(s) 861
BtsCI GGATG 4 cut(s) 89, 136, 367, 871
BtsIMutI CAGTG 5 cut(s) 153, 169, 1022, 1056, 1277
BveI ACCTGC 1 cut(s) 839
Cac8I GCNNGC 2 cut(s) 368, 390
CaiI CAGNNNCTG 1 cut(s) 1021
CciI TCATGA 2 cut(s) 780, 1165
Cfr13I GGNCC 4 cut(s) 707, 906, 952, 1109
Csp6I GTAC 6 cut(s) 286, 448, 750, 876, 973, 1290
CviAII CATG 9 cut(s) 490, 602, 728, 740, 745, 755, 781, 862, 1166
CviQI GTAC 6 cut(s) 286, 448, 750, 876, 973, 1290
DdeI CTNAG 7 cut(s) 161, 246, 311, 505, 590, 675, 1022
DpnI GATC 6 cut(s) 101, 190, 230, 859, 1106, 1152
DpnII GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
DrdI GACNNNNNNGTC 2 cut(s) 966, 1248
DseDI GACNNNNNNGTC 2 cut(s) 966, 1248
Ecl136II GAGCTC 1 cut(s) 220
Eco130I CCWWGG 2 cut(s) 545, 861
Eco147I AGGCCT 2 cut(s) 316, 588
Eco24I GRGCYC 1 cut(s) 222
Eco47I GGWCC 2 cut(s) 952, 1109
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 2 cut(s) 414, 1301
Eco88I CYCGRG 1 cut(s) 962
EcoICRI GAGCTC 1 cut(s) 220
EcoNI CCTNNNNNAGG 1 cut(s) 602
EcoRII CCWGG 1 cut(s) 316
EcoT14I CCWWGG 2 cut(s) 545, 861
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 2 cut(s) 545, 861
Esp3I CGTCTC 1 cut(s) 1234
FaeI CATG 9 cut(s) 493, 605, 731, 743, 748, 758, 784, 865, 1169
FatI CATG 9 cut(s) 489, 601, 727, 739, 744, 754, 780, 861, 1165
FauI CCCGC 1 cut(s) 263
Fnu4HI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
FokI GGATG 4 cut(s) 76, 143, 374, 878
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
FspBI CTAG 7 cut(s) 17, 656, 695, 845, 896, 1041, 1287
GluI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
GsuI CTGGAG 1 cut(s) 753
HaeIII GGCC 5 cut(s) 53, 316, 588, 708, 908
HapII CCGG 2 cut(s) 710, 1237
Hin1I GRCGYC 1 cut(s) 810
Hin1II CATG 9 cut(s) 493, 605, 731, 743, 748, 758, 784, 865, 1169
HincII GTYRAC 1 cut(s) 552
HindII GTYRAC 1 cut(s) 552
HindIII AAGCTT 2 cut(s) 238, 308
HinfI GANTC 5 cut(s) 558, 926, 960, 1024, 1136
HpaII CCGG 2 cut(s) 710, 1237
HphI GGTGA 2 cut(s) 731, 1205
Hpy166II GTNNAC 3 cut(s) 286, 436, 552
Hpy188I TCNGA 9 cut(s) 70, 130, 188, 685, 1109, 1254, 1269, 1303, 1328
Hpy188III TCNNGA 7 cut(s) 534, 770, 781, 1041, 1066, 1140, 1166
Hpy8I GTNNAC 3 cut(s) 286, 436, 552
Hpy99I CGWCG 1 cut(s) 812
HpyAV CCTTC 5 cut(s) 260, 707, 916, 977, 1219
HpyCH4III ACNGT 5 cut(s) 157, 662, 944, 1060, 1294
HpyCH4IV ACGT 1 cut(s) 810
HpyCH4V TGCA 3 cut(s) 153, 764, 1004
HpyF10VI GCNNNNNNNGC 5 cut(s) 418, 575, 714, 995, 1007
HpyF3I CTNAG 7 cut(s) 161, 246, 311, 505, 590, 675, 1022
HpySE526I ACGT 1 cut(s) 810
Hsp92I GRCGYC 1 cut(s) 810
Hsp92II CATG 9 cut(s) 493, 605, 731, 743, 748, 758, 784, 865, 1169
Kzo9I GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
LmnI GCTCC 2 cut(s) 575, 772
Lsp1109I GCAGC 4 cut(s) 565, 776, 988, 1242
LweI GCATC 1 cut(s) 1273
MaeI CTAG 7 cut(s) 17, 656, 695, 845, 896, 1041, 1287
MaeII ACGT 1 cut(s) 810
MaeIII GTNAC 3 cut(s) 120, 164, 730
MalI GATC 6 cut(s) 101, 190, 230, 859, 1106, 1152
MboI GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
MboII GAAGA 6 cut(s) 22, 188, 470, 620, 867, 1160
MfeI CAATTG 2 cut(s) 413, 570
MflI RGATCY 1 cut(s) 857
MhlI GDGCHC 2 cut(s) 222, 1058
MluCI AATT 7 cut(s) 139, 175, 253, 413, 570, 1155, 1220
MlyI GAGTC 4 cut(s) 567, 920, 954, 1033
MmeI TCCRAC 2 cut(s) 1154, 1194
MseI TTAA 3 cut(s) 345, 794, 1272
MslI CAYNNNNRTG 1 cut(s) 759
MspI CCGG 2 cut(s) 710, 1237
MspR9I CCNGG 2 cut(s) 318, 710
MunI CAATTG 2 cut(s) 413, 570
MvaI CCWGG 1 cut(s) 318
MvnI CGCG 1 cut(s) 112
MwoI GCNNNNNNNGC 5 cut(s) 418, 575, 714, 995, 1007
NciI CCSGG 1 cut(s) 710
NcoI CCATGG 1 cut(s) 861
NdeII GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
NlaIII CATG 9 cut(s) 493, 605, 731, 743, 748, 758, 784, 865, 1169
NlaIV GGNNCC 2 cut(s) 538, 1111
NmuCI GTSAC 3 cut(s) 120, 164, 730
NspI RCATGY 2 cut(s) 731, 743
PaeR7I CTCGAG 1 cut(s) 962
PagI TCATGA 2 cut(s) 780, 1165
PceI AGGCCT 2 cut(s) 316, 588
PciI ACATGT 1 cut(s) 727
PfeI GAWTC 1 cut(s) 1136
PkrI GCNGC 5 cut(s) 580, 766, 1000, 1003, 1232
Ple19I CGATCG 1 cut(s) 1107
PleI GAGTC 4 cut(s) 566, 920, 954, 1032
PpsI GAGTC 4 cut(s) 566, 920, 954, 1032
PscI ACATGT 1 cut(s) 727
PshAI GACNNNNGTC 1 cut(s) 557
Psp124BI GAGCTC 1 cut(s) 222
Psp6I CCWGG 1 cut(s) 316
PspGI CCWGG 1 cut(s) 316
PspN4I GGNNCC 2 cut(s) 538, 1111
PspPI GGNCC 4 cut(s) 707, 906, 952, 1109
PspXI VCTCGAGB 1 cut(s) 962
PstNI CAGNNNCTG 1 cut(s) 1021
PsuI RGATCY 1 cut(s) 857
PvuI CGATCG 1 cut(s) 1107
RsaI GTAC 6 cut(s) 287, 449, 751, 877, 974, 1291
RsaNI GTAC 6 cut(s) 286, 448, 750, 876, 973, 1290
RseI CAYNNNNRTG 1 cut(s) 759
SacI GAGCTC 1 cut(s) 222
SaqAI TTAA 3 cut(s) 345, 794, 1272
SatI GCNGC 5 cut(s) 579, 765, 999, 1002, 1231
Sau3AI GATC 6 cut(s) 99, 188, 228, 857, 1104, 1150
Sau96I GGNCC 4 cut(s) 707, 906, 952, 1109
ScaI AGTACT 2 cut(s) 974, 1291
SchI GAGTC 4 cut(s) 567, 920, 954, 1033
ScrFI CCNGG 2 cut(s) 318, 710
SduI GDGCHC 2 cut(s) 222, 1058
SfaNI GCATC 1 cut(s) 1273
SfcI CTRYAG 2 cut(s) 699, 814
Sfr274I CTCGAG 1 cut(s) 962
SinI GGWCC 2 cut(s) 952, 1109
SlaI CTCGAG 1 cut(s) 962
SmiMI CAYNNNNRTG 1 cut(s) 759
SmlI CTYRAG 1 cut(s) 962
SmoI CTYRAG 1 cut(s) 962
Sse9I AATT 7 cut(s) 139, 175, 253, 413, 570, 1155, 1220
SseBI AGGCCT 2 cut(s) 316, 588
SsiI CCGC 3 cut(s) 270, 717, 998
SspMI CTAG 7 cut(s) 17, 656, 695, 845, 896, 1041, 1287
SstI GAGCTC 1 cut(s) 222
StuI AGGCCT 2 cut(s) 316, 588
StyD4I CCNGG 2 cut(s) 316, 708
StyI CCWWGG 2 cut(s) 545, 861
TaaI ACNGT 5 cut(s) 157, 662, 944, 1060, 1294
TaiI ACGT 1 cut(s) 813
TaqI TCGA 2 cut(s) 222, 963
TaqII GACCGA 1 cut(s) 680
TasI AATT 7 cut(s) 139, 175, 253, 413, 570, 1155, 1220
TatI WGTACW 3 cut(s) 285, 972, 1289
TauI GCSGC 1 cut(s) 1001
TfiI GAWTC 1 cut(s) 1136
Tru1I TTAA 3 cut(s) 345, 794, 1272
Tru9I TTAA 3 cut(s) 345, 794, 1272
TscAI CASTG 5 cut(s) 160, 169, 1022, 1063, 1284
TseFI GTSAC 3 cut(s) 120, 164, 730
TseI GCWGC 4 cut(s) 578, 764, 1001, 1230
Tsp45I GTSAC 3 cut(s) 120, 164, 730
TspDTI ATGAA 5 cut(s) 132, 188, 477, 498, 1100
TspRI CASTG 5 cut(s) 160, 169, 1022, 1063, 1284
VpaK11BI GGWCC 2 cut(s) 952, 1109
XagI CCTNNNNNAGG 1 cut(s) 602
XapI RAATTY 1 cut(s) 175
XbaI TCTAGA 1 cut(s) 1040
XceI RCATGY 2 cut(s) 731, 743
XhoI CTCGAG 1 cut(s) 962
XspI CTAG 7 cut(s) 17, 656, 695, 845, 896, 1041, 1287
ZraI GACGTC 1 cut(s) 811
ZrmI AGTACT 2 cut(s) 974, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.