AT1G73770

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
27742081 .. 27743565
1485 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G73770.3

Sequence Viewer

Length: 576 bp
ATGAGACGATTTCTGCAGAGAGTTCCCAGTTTACTGGCTCGAAATATCCTTCACTCACCCGCAAATTTCCGCCATTTGAGAATCAACAACCCTCGTGTTGTTGTTCCTCTCTTCGAACGAGCTATTTCCCGGTTCGTCTTCTTCTCTTCCGAGTCCGACTCGTCGCGTGGTTTCAGAACTGAAGAGGTTCTTTCTAAAGAAGAGCTGAAAAAAAGAATTCAAAGCTTTTTGGATGATGGAAATGAGGATGCTATACCTGATTTATTTGAGGCATTGATGATTAGGAAGTTATCAGGGAAGCACGATGATAGTGATGATGAAGTGATGGATGTGGTGCGTAAGTATCCAGTTAACGATGCACATAAGGTTGACGATATTGACTCTGATATTGAGAGTGATGGCCATGGTGATTCGTCTGATTCAGATATTGAGAGTGATGACTTGAGAGATGGTGATTCGTCTGATTCCGATGTAGAGTTTGATGGTTTCAATGATGTTGGCTTGTCTGATGTCAATATTAAGACTGATGCCCTGAAAGCTAATCGCTCGTCTTATTCTTACTCTGAAAGTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

191

Amino Acids

21.65

Weight (kDa)

4.56

Isoelectric Point (pI)

62.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 166
AciI CCGC 2 cut(s) 60, 70
AcoI YGGCCR 1 cut(s) 400
AcsI RAATTY 2 cut(s) 64, 216
AcuI CTGAAG 1 cut(s) 201
AgsI TTSAA 2 cut(s) 221, 490
AluBI AGCT 4 cut(s) 122, 205, 225, 539
AluI AGCT 4 cut(s) 122, 205, 225, 539
AoxI GGCC 1 cut(s) 400
ApoI RAATTY 2 cut(s) 64, 216
Asp700I GAANNNNTTC 1 cut(s) 186
AsuC2I CCSGG 1 cut(s) 130
AsuHPI GGTGA 3 cut(s) 48, 419, 464
AsuII TTCGAA 1 cut(s) 114
BalI TGGCCA 1 cut(s) 402
BauI CACGAG 1 cut(s) 93
BbsI GAAGAC 1 cut(s) 130
BccI CCATC 5 cut(s) 230, 319, 392, 443, 476
BciVI GTATCC 1 cut(s) 354
BcnI CCSGG 1 cut(s) 130
BfmI CTRYAG 1 cut(s) 14
BfuI GTATCC 1 cut(s) 354
Bme1390I CCNGG 1 cut(s) 130
BmrFI CCNGG 1 cut(s) 130
BmrI ACTGGG 1 cut(s) 21
BmsI GCATC 3 cut(s) 238, 346, 517
BmuI ACTGGG 1 cut(s) 21
BpiI GAAGAC 1 cut(s) 130
BplI GAGNNNNNCTC 2 cut(s) 143, 175
Bpu14I TTCGAA 1 cut(s) 114
BpuEI CTTGAG 1 cut(s) 463
BpuMI CCSGG 1 cut(s) 130
BsaJI CCNNGG 1 cut(s) 403
Bse1I ACTGG 3 cut(s) 27, 39, 347
BseDI CCNNGG 1 cut(s) 403
BseGI GGATG 3 cut(s) 238, 253, 334
BseNI ACTGG 3 cut(s) 27, 39, 347
Bsh1236I CGCG 1 cut(s) 166
BshFI GGCC 1 cut(s) 402
BsiSI CCGG 1 cut(s) 130
BsnI GGCC 1 cut(s) 402
Bsp119I TTCGAA 1 cut(s) 114
Bsp19I CCATGG 1 cut(s) 403
BspACI CCGC 2 cut(s) 60, 70
BspANI GGCC 1 cut(s) 402
BspFNI CGCG 1 cut(s) 166
BspMAI CTGCAG 1 cut(s) 18
BspQI GCTCTTC 1 cut(s) 195
BspT104I TTCGAA 1 cut(s) 114
BsrI ACTGG 3 cut(s) 27, 39, 347
BssECI CCNNGG 1 cut(s) 403
BssSI CACGAG 1 cut(s) 93
BssT1I CCWWGG 1 cut(s) 403
Bst2BI CACGAG 1 cut(s) 93
Bst6I CTCTTC 4 cut(s) 116, 151, 177, 195
BstBI TTCGAA 1 cut(s) 114
BstDSI CCRYGG 1 cut(s) 403
BstF5I GGATG 3 cut(s) 238, 253, 334
BstFNI CGCG 1 cut(s) 166
BstMWI GCNNNNNNNGC 1 cut(s) 536
BstSCI CCNGG 1 cut(s) 128
BstSFI CTRYAG 1 cut(s) 14
BstUI CGCG 1 cut(s) 166
BstV2I GAAGAC 1 cut(s) 130
BstXI CCANNNNNNTGG 1 cut(s) 34
BsuI GTATCC 1 cut(s) 354
BsuRI GGCC 1 cut(s) 402
BtgI CCRYGG 1 cut(s) 403
BtsCI GGATG 3 cut(s) 238, 253, 334
CviAII CATG 1 cut(s) 404
CviJI RGCY 7 cut(s) 38, 122, 205, 225, 402, 501, 539
CviKI_1 RGCY 7 cut(s) 38, 122, 205, 225, 402, 501, 539
EaeI YGGCCR 1 cut(s) 400
Eam1104I CTCTTC 4 cut(s) 116, 151, 177, 195
EarI CTCTTC 4 cut(s) 116, 151, 177, 195
EciI GGCGGA 1 cut(s) 59
Eco130I CCWWGG 1 cut(s) 403
Eco57I CTGAAG 1 cut(s) 201
EcoRI GAATTC 1 cut(s) 216
EcoT14I CCWWGG 1 cut(s) 403
ErhI CCWWGG 1 cut(s) 403
FaeI CATG 1 cut(s) 407
FaiI YATR 3 cut(s) 254, 363, 405
FalI AAGNNNNNCTT 2 cut(s) 174, 206
FatI CATG 1 cut(s) 403
FauI CCCGC 1 cut(s) 67
FokI GGATG 3 cut(s) 245, 260, 341
HaeIII GGCC 1 cut(s) 402
HapII CCGG 1 cut(s) 130
Hin1II CATG 1 cut(s) 407
HincII GTYRAC 2 cut(s) 352, 370
HindII GTYRAC 2 cut(s) 352, 370
HindIII AAGCTT 1 cut(s) 223
HinfI GANTC 8 cut(s) 81, 152, 158, 380, 410, 419, 455, 464
HpaI GTTAAC 1 cut(s) 352
HpaII CCGG 1 cut(s) 130
HphI GGTGA 3 cut(s) 48, 419, 464
Hpy166II GTNNAC 3 cut(s) 32, 352, 370
Hpy8I GTNNAC 3 cut(s) 32, 352, 370
Hpy99I CGWCG 1 cut(s) 166
HpyAV CCTTC 1 cut(s) 59
HpyCH4V TGCA 2 cut(s) 16, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 536
Hsp92II CATG 1 cut(s) 407
KspAI GTTAAC 1 cut(s) 352
LguI GCTCTTC 1 cut(s) 195
LpnPI CCDG 7 cut(s) 20, 40, 143, 270, 279, 360, 545
LweI GCATC 3 cut(s) 238, 346, 517
MboII GAAGA 6 cut(s) 103, 130, 133, 138, 194, 212
MlsI TGGCCA 1 cut(s) 402
MluCI AATT 2 cut(s) 64, 216
MluNI TGGCCA 1 cut(s) 402
MlyI GAGTC 3 cut(s) 152, 161, 374
MmeI TCCRAC 1 cut(s) 180
MnlI CCTC 5 cut(s) 102, 117, 178, 238, 262
Mox20I TGGCCA 1 cut(s) 402
MroXI GAANNNNTTC 1 cut(s) 186
MscI TGGCCA 1 cut(s) 402
MseI TTAA 3 cut(s) 351, 519, 574
Msp20I TGGCCA 1 cut(s) 402
MspI CCGG 1 cut(s) 130
MspR9I CCNGG 1 cut(s) 130
MvnI CGCG 1 cut(s) 166
MwoI GCNNNNNNNGC 1 cut(s) 536
NciI CCSGG 1 cut(s) 130
NcoI CCATGG 1 cut(s) 403
NlaIII CATG 1 cut(s) 407
NspV TTCGAA 1 cut(s) 114
PciSI GCTCTTC 1 cut(s) 195
PdmI GAANNNNTTC 1 cut(s) 186
PfeI GAWTC 5 cut(s) 81, 410, 419, 455, 464
PleI GAGTC 3 cut(s) 152, 160, 374
PpsI GAGTC 3 cut(s) 152, 160, 374
PstI CTGCAG 1 cut(s) 18
SapI GCTCTTC 1 cut(s) 195
SaqAI TTAA 3 cut(s) 351, 519, 574
SchI GAGTC 3 cut(s) 152, 161, 374
ScrFI CCNGG 1 cut(s) 130
SetI ASST 7 cut(s) 124, 189, 207, 227, 259, 369, 541
SfaNI GCATC 3 cut(s) 238, 346, 517
SfcI CTRYAG 1 cut(s) 14
SfuI TTCGAA 1 cut(s) 114
SmlI CTYRAG 1 cut(s) 442
SmoI CTYRAG 1 cut(s) 442
Sse9I AATT 2 cut(s) 64, 216
SsiI CCGC 2 cut(s) 60, 70
SspI AATATT 1 cut(s) 517
StyD4I CCNGG 1 cut(s) 128
StyI CCWWGG 1 cut(s) 403
TaqI TCGA 2 cut(s) 40, 114
TasI AATT 2 cut(s) 64, 216
TfiI GAWTC 5 cut(s) 81, 410, 419, 455, 464
Tru1I TTAA 3 cut(s) 351, 519, 574
Tru9I TTAA 3 cut(s) 351, 519, 574
TspDTI ATGAA 1 cut(s) 333
XapI RAATTY 2 cut(s) 64, 216
XmnI GAANNNNTTC 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.