No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74055 |
| malus_domestica | MD14G1219300.v1.1 |
| prunus_persica | Prupe.5G214000_v2.0.a1 |
| pyrus_communis | pycom06g18650 pycom14g18170 |
| rosa_chinensis | RchiOBHm_Chr7g0184281 |
| rosa_laevigata | RLG00000004990 |
| rosa_multiflora | Rmu_co8406705.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00269770 |
| rosa_samantha | Rh7AG081500 Rh7BG065800 Rh7CG066100 Rh7DG065800 |
| rosa_wichuraiana | Rw7G005390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 229 |
| AciI | CCGC | 1 cut(s) | 238 |
| AcoI | YGGCCR | 1 cut(s) | 336 |
| AcsI | RAATTY | 1 cut(s) | 408 |
| AcuI | CTGAAG | 1 cut(s) | 282 |
| AluBI | AGCT | 4 cut(s) | 27, 150, 359, 431 |
| AluI | AGCT | 4 cut(s) | 27, 150, 359, 431 |
| Alw26I | GTCTC | 2 cut(s) | 307, 319 |
| AoxI | GGCC | 2 cut(s) | 336, 351 |
| ApeKI | GCWGC | 2 cut(s) | 24, 116 |
| ApoI | RAATTY | 1 cut(s) | 408 |
| AspLEI | GCGC | 1 cut(s) | 230 |
| AspS9I | GGNCC | 1 cut(s) | 158 |
| AsuNHI | GCTAGC | 1 cut(s) | 377 |
| AvaII | GGWCC | 1 cut(s) | 158 |
| BbvI | GCAGC | 2 cut(s) | 36, 128 |
| BclI | TGATCA | 1 cut(s) | 403 |
| BcoDI | GTCTC | 2 cut(s) | 307, 319 |
| BfaI | CTAG | 4 cut(s) | 12, 254, 378, 416 |
| BisI | GCNGC | 3 cut(s) | 25, 117, 238 |
| BlsI | GCNGC | 3 cut(s) | 26, 118, 239 |
| Bme18I | GGWCC | 1 cut(s) | 158 |
| BmgT120I | GGNCC | 1 cut(s) | 158 |
| BmiI | GGNNCC | 2 cut(s) | 160, 236 |
| BmtI | GCTAGC | 1 cut(s) | 381 |
| BpmI | CTGGAG | 1 cut(s) | 411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 402 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 316, 346, 348, 378 |
| Bse1I | ACTGG | 1 cut(s) | 253 |
| Bse3DI | GCAATG | 1 cut(s) | 82 |
| Bse8I | GATNNNNATC | 1 cut(s) | 402 |
| BseJI | GATNNNNATC | 1 cut(s) | 402 |
| BseMI | GCAATG | 1 cut(s) | 82 |
| BseMII | CTCAG | 1 cut(s) | 302 |
| BseNI | ACTGG | 1 cut(s) | 253 |
| BseXI | GCAGC | 2 cut(s) | 36, 128 |
| BshFI | GGCC | 2 cut(s) | 338, 353 |
| BsiSI | CCGG | 2 cut(s) | 339, 354 |
| BsmAI | GTCTC | 2 cut(s) | 307, 319 |
| BsmBI | CGTCTC | 2 cut(s) | 307, 319 |
| BsnI | GGCC | 2 cut(s) | 338, 353 |
| Bsp143I | GATC | 2 cut(s) | 81, 403 |
| BspACI | CCGC | 1 cut(s) | 238 |
| BspANI | GGCC | 2 cut(s) | 338, 353 |
| BspCNI | CTCAG | 1 cut(s) | 303 |
| BspLI | GGNNCC | 2 cut(s) | 160, 236 |
| BspOI | GCTAGC | 1 cut(s) | 381 |
| BsrDI | GCAATG | 1 cut(s) | 82 |
| BsrI | ACTGG | 1 cut(s) | 253 |
| BssMI | GATC | 2 cut(s) | 81, 403 |
| Bst4CI | ACNGT | 1 cut(s) | 330 |
| Bst6I | CTCTTC | 1 cut(s) | 148 |
| BstC8I | GCNNGC | 1 cut(s) | 379 |
| BstDEI | CTNAG | 1 cut(s) | 311 |
| BstHHI | GCGC | 1 cut(s) | 230 |
| BstKTI | GATC | 2 cut(s) | 84, 406 |
| BstMAI | GTCTC | 2 cut(s) | 307, 319 |
| BstMBI | GATC | 2 cut(s) | 81, 403 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 101, 125, 234, 365, 374, 428 |
| BstV1I | GCAGC | 2 cut(s) | 36, 128 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 248 |
| BsuRI | GGCC | 2 cut(s) | 338, 353 |
| Cac8I | GCNNGC | 1 cut(s) | 379 |
| CfoI | GCGC | 1 cut(s) | 230 |
| Cfr13I | GGNCC | 1 cut(s) | 158 |
| DdeI | CTNAG | 1 cut(s) | 311 |
| DpnI | GATC | 2 cut(s) | 83, 405 |
| DpnII | GATC | 2 cut(s) | 81, 403 |
| EaeI | YGGCCR | 1 cut(s) | 336 |
| Eam1104I | CTCTTC | 1 cut(s) | 148 |
| EarI | CTCTTC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 1 cut(s) | 158 |
| Eco57I | CTGAAG | 1 cut(s) | 282 |
| Esp3I | CGTCTC | 2 cut(s) | 307, 319 |
| FaiI | YATR | 3 cut(s) | 8, 92, 176 |
| FbaI | TGATCA | 1 cut(s) | 403 |
| Fnu4HI | GCNGC | 3 cut(s) | 25, 117, 238 |
| Fsp4HI | GCNGC | 3 cut(s) | 25, 117, 238 |
| FspBI | CTAG | 4 cut(s) | 12, 254, 378, 416 |
| FspI | TGCGCA | 1 cut(s) | 229 |
| GlaI | GCGC | 1 cut(s) | 229 |
| GluI | GCNGC | 3 cut(s) | 25, 117, 238 |
| GsuI | CTGGAG | 1 cut(s) | 411 |
| HaeIII | GGCC | 2 cut(s) | 338, 353 |
| HapII | CCGG | 2 cut(s) | 339, 354 |
| HhaI | GCGC | 1 cut(s) | 230 |
| Hin6I | GCGC | 1 cut(s) | 228 |
| HinP1I | GCGC | 1 cut(s) | 228 |
| HinfI | GANTC | 1 cut(s) | 222 |
| HpaII | CCGG | 2 cut(s) | 339, 354 |
| Hpy188III | TCNNGA | 1 cut(s) | 416 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 330 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 101, 125, 234, 365, 374, 428 |
| HpyF3I | CTNAG | 1 cut(s) | 311 |
| HspAI | GCGC | 1 cut(s) | 228 |
| Ksp22I | TGATCA | 1 cut(s) | 403 |
| Kzo9I | GATC | 2 cut(s) | 81, 403 |
| LmnI | GCTCC | 4 cut(s) | 133, 155, 234, 356 |
| LpnPI | CCDG | 6 cut(s) | 160, 220, 234, 254, 352, 367 |
| Lsp1109I | GCAGC | 2 cut(s) | 36, 128 |
| MaeI | CTAG | 4 cut(s) | 12, 254, 378, 416 |
| MalI | GATC | 2 cut(s) | 83, 405 |
| MboI | GATC | 2 cut(s) | 81, 403 |
| MboII | GAAGA | 2 cut(s) | 135, 157 |
| MluCI | AATT | 2 cut(s) | 65, 408 |
| MmeI | TCCRAC | 2 cut(s) | 70, 255 |
| MnlI | CCTC | 4 cut(s) | 65, 66, 343, 435 |
| MslI | CAYNNNNRTG | 1 cut(s) | 89 |
| MspI | CCGG | 2 cut(s) | 339, 354 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 101, 125, 234, 365, 374, 428 |
| NdeII | GATC | 2 cut(s) | 81, 403 |
| NheI | GCTAGC | 1 cut(s) | 377 |
| NlaIV | GGNNCC | 2 cut(s) | 160, 236 |
| NsbI | TGCGCA | 1 cut(s) | 229 |
| PfeI | GAWTC | 1 cut(s) | 222 |
| PkrI | GCNGC | 3 cut(s) | 26, 118, 239 |
| PspN4I | GGNNCC | 2 cut(s) | 160, 236 |
| PspPI | GGNCC | 1 cut(s) | 158 |
| RseI | CAYNNNNRTG | 1 cut(s) | 89 |
| SatI | GCNGC | 3 cut(s) | 25, 117, 238 |
| Sau3AI | GATC | 2 cut(s) | 81, 403 |
| Sau96I | GGNCC | 1 cut(s) | 158 |
| SetI | ASST | 9 cut(s) | 29, 58, 91, 152, 307, 361, 394, 427, 433 |
| SinI | GGWCC | 1 cut(s) | 158 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 89 |
| Sse9I | AATT | 2 cut(s) | 65, 408 |
| SsiI | CCGC | 1 cut(s) | 238 |
| SspMI | CTAG | 4 cut(s) | 12, 254, 378, 416 |
| TaaI | ACNGT | 1 cut(s) | 330 |
| TaqI | TCGA | 1 cut(s) | 220 |
| TasI | AATT | 2 cut(s) | 65, 408 |
| TauI | GCSGC | 1 cut(s) | 240 |
| TfiI | GAWTC | 1 cut(s) | 222 |
| TseI | GCWGC | 2 cut(s) | 24, 116 |
| TspGWI | ACGGA | 2 cut(s) | 247, 261 |
| VpaK11BI | GGWCC | 1 cut(s) | 158 |
| XapI | RAATTY | 1 cut(s) | 408 |
| XbaI | TCTAGA | 1 cut(s) | 415 |
| XspI | CTAG | 4 cut(s) | 12, 254, 378, 416 |