protein required for chloroplast accumulation response
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75100 |
| fragaria_vesca | FvH4_2g40090 |
| malus_domestica | MD08G1032500.v1.1 MD15G1029200.v1.1 |
| prunus_persica | Prupe.1G382200_v2.0.a1 Prupe.1G382200_v2.0.a1 |
| pyrus_communis | pycom08g02580 pycom15g02590 |
| rosa_chinensis | RchiOBHm_Chr6g0300651 |
| rosa_laevigata | RLG00000011314 |
| rosa_multiflora | Rmu_co8005646.1_g000001 Rmu_sc0004226.1_g000015 Rmu_sc0014374.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00167530 |
| rosa_rugosa | Rorug06G0298200 |
| rosa_samantha | Rh6AG410800 Rh6BG418000 Rh6CG425500 Rh6DG410900 |
| rosa_wichuraiana | Rw0G002200 Rw6G035940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1277 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 203 |
| AatII | GACGTC | 2 cut(s) | 201, 213 |
| Acc36I | ACCTGC | 1 cut(s) | 1277 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1214 |
| AccBSI | CCGCTC | 2 cut(s) | 182, 1758 |
| AccI | GTMKAC | 1 cut(s) | 207 |
| AccII | CGCG | 1 cut(s) | 1802 |
| AciI | CCGC | 7 cut(s) | 180, 227, 1425, 1681, 1695, 1758, 1802 |
| AclWI | GGATC | 4 cut(s) | 343, 356, 563, 1446 |
| AcoI | YGGCCR | 1 cut(s) | 1890 |
| AcsI | RAATTY | 1 cut(s) | 1588 |
| AcuI | CTGAAG | 5 cut(s) | 154, 366, 720, 1260, 1671 |
| AcvI | CACGTG | 1 cut(s) | 908 |
| AcyI | GRCGYC | 4 cut(s) | 190, 198, 210, 274 |
| AfaI | GTAC | 3 cut(s) | 711, 1518, 1817 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 186, 248, 358, 638, 1214 |
| AflIII | ACRYGT | 1 cut(s) | 105 |
| AgeI | ACCGGT | 1 cut(s) | 1948 |
| AgsI | TTSAA | 7 cut(s) | 469, 516, 799, 871, 1008, 1116, 1936 |
| AhlI | ACTAGT | 1 cut(s) | 143 |
| AjiI | CACGTC | 2 cut(s) | 85, 106 |
| AjnI | CCWGG | 2 cut(s) | 829, 1504 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 396, 428 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1788, 1820 |
| Alw21I | GWGCWC | 1 cut(s) | 497 |
| Alw26I | GTCTC | 8 cut(s) | 121, 399, 538, 692, 901, 1024, 1522, 1722 |
| AlwI | GGATC | 4 cut(s) | 343, 356, 563, 1446 |
| AoxI | GGCC | 4 cut(s) | 629, 951, 1635, 1890 |
| ApeKI | GCWGC | 3 cut(s) | 452, 1202, 1732 |
| ApoI | RAATTY | 1 cut(s) | 1588 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 80, 112, 1212, 1244 |
| AsiGI | ACCGGT | 1 cut(s) | 1948 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 27, 733, 1901 |
| AspS9I | GGNCC | 3 cut(s) | 116, 1927, 1946 |
| AsuC2I | CCSGG | 4 cut(s) | 72, 339, 359, 1481 |
| AsuHPI | GGTGA | 3 cut(s) | 113, 274, 1520 |
| AsuII | TTCGAA | 2 cut(s) | 1807, 1905 |
| AvaII | GGWCC | 3 cut(s) | 116, 1927, 1946 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 693, 726 |
| BamHI | GGATCC | 1 cut(s) | 348 |
| BanII | GRGCYC | 2 cut(s) | 497, 1578 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1258, 1290 |
| BbrPI | CACGTG | 1 cut(s) | 908 |
| BbsI | GAAGAC | 2 cut(s) | 404, 818 |
| Bbv12I | GWGCWC | 1 cut(s) | 497 |
| BbvCI | CCTCAGC | 1 cut(s) | 693 |
| BbvI | GCAGC | 3 cut(s) | 464, 1214, 1719 |
| BccI | CCATC | 5 cut(s) | 406, 767, 1217, 1311, 1352 |
| BciT130I | CCWGG | 2 cut(s) | 831, 1506 |
| BclI | TGATCA | 1 cut(s) | 1393 |
| BcnI | CCSGG | 4 cut(s) | 72, 339, 359, 1481 |
| BcoDI | GTCTC | 8 cut(s) | 121, 399, 538, 692, 901, 1024, 1522, 1722 |
| BcuI | ACTAGT | 1 cut(s) | 143 |
| BfaI | CTAG | 4 cut(s) | 144, 669, 1314, 1539 |
| BfuAI | ACCTGC | 1 cut(s) | 1277 |
| BisI | GCNGC | 3 cut(s) | 453, 1203, 1733 |
| BlsI | GCNGC | 3 cut(s) | 454, 1204, 1734 |
| Bme1390I | CCNGG | 6 cut(s) | 72, 339, 359, 831, 1481, 1506 |
| Bme18I | GGWCC | 3 cut(s) | 116, 1927, 1946 |
| BmgBI | CACGTC | 2 cut(s) | 85, 106 |
| BmgT120I | GGNCC | 3 cut(s) | 116, 1927, 1946 |
| BmiI | GGNNCC | 5 cut(s) | 40, 350, 1503, 1773, 1928 |
| BmrFI | CCNGG | 6 cut(s) | 72, 339, 359, 831, 1481, 1506 |
| BmrI | ACTGGG | 1 cut(s) | 600 |
| BmsI | GCATC | 2 cut(s) | 1636, 1660 |
| BmuI | ACTGGG | 1 cut(s) | 600 |
| BpiI | GAAGAC | 2 cut(s) | 404, 818 |
| BpmI | CTGGAG | 1 cut(s) | 1398 |
| Bpu10I | CCTNAGC | 2 cut(s) | 353, 693 |
| Bpu14I | TTCGAA | 2 cut(s) | 1807, 1905 |
| BpuMI | CCSGG | 4 cut(s) | 72, 339, 359, 1481 |
| Bsa29I | ATCGAT | 2 cut(s) | 93, 1668 |
| BsaAI | YACGTR | 1 cut(s) | 908 |
| BsaHI | GRCGYC | 4 cut(s) | 190, 198, 210, 274 |
| BsaI | GGTCTC | 2 cut(s) | 538, 1722 |
| BsaJI | CCNNGG | 1 cut(s) | 1371 |
| BsaWI | WCCGGW | 1 cut(s) | 1948 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 379, 409, 633, 663, 1263, 1293 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 186, 248, 358, 638, 1214 |
| Bse118I | RCCGGY | 2 cut(s) | 1768, 1948 |
| Bse1I | ACTGG | 1 cut(s) | 595 |
| BseBI | CCWGG | 2 cut(s) | 831, 1506 |
| BseCI | ATCGAT | 2 cut(s) | 93, 1668 |
| BseDI | CCNNGG | 1 cut(s) | 1371 |
| BseGI | GGATG | 3 cut(s) | 398, 1651, 1840 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 186, 248, 358, 638, 1214 |
| BseMII | CTCAG | 5 cut(s) | 33, 60, 684, 1475, 1572 |
| BseNI | ACTGG | 1 cut(s) | 595 |
| BseRI | GAGGAG | 1 cut(s) | 710 |
| BseXI | GCAGC | 3 cut(s) | 464, 1214, 1719 |
| Bsh1236I | CGCG | 1 cut(s) | 1802 |
| BshFI | GGCC | 4 cut(s) | 631, 953, 1637, 1892 |
| BshTI | ACCGGT | 1 cut(s) | 1948 |
| BshVI | ATCGAT | 2 cut(s) | 93, 1668 |
| BsiHKAI | GWGCWC | 1 cut(s) | 497 |
| BsiSI | CCGG | 8 cut(s) | 72, 187, 271, 338, 359, 1480, 1769, 1949 |
| BslFI | GGGAC | 3 cut(s) | 54, 400, 1940 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 186, 248, 358, 638, 1214 |
| BsmAI | GTCTC | 8 cut(s) | 121, 399, 538, 692, 901, 1024, 1522, 1722 |
| BsmBI | CGTCTC | 2 cut(s) | 121, 399 |
| BsmFI | GGGAC | 3 cut(s) | 54, 400, 1940 |
| BsnI | GGCC | 4 cut(s) | 631, 953, 1637, 1892 |
| Bso31I | GGTCTC | 2 cut(s) | 538, 1722 |
| Bsp119I | TTCGAA | 2 cut(s) | 1807, 1905 |
| Bsp1286I | GDGCHC | 2 cut(s) | 497, 1578 |
| Bsp1407I | TGTACA | 1 cut(s) | 1516 |
| Bsp143I | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| BspACI | CCGC | 7 cut(s) | 180, 227, 1425, 1681, 1695, 1758, 1802 |
| BspANI | GGCC | 4 cut(s) | 631, 953, 1637, 1892 |
| BspCNI | CTCAG | 5 cut(s) | 32, 59, 685, 1474, 1571 |
| BspDI | ATCGAT | 2 cut(s) | 93, 1668 |
| BspFNI | CGCG | 1 cut(s) | 1802 |
| BspHI | TCATGA | 2 cut(s) | 1015, 1354 |
| BspLI | GGNNCC | 5 cut(s) | 40, 350, 1503, 1773, 1928 |
| BspMI | ACCTGC | 1 cut(s) | 1277 |
| BspPI | GGATC | 4 cut(s) | 343, 356, 563, 1446 |
| BspT104I | TTCGAA | 2 cut(s) | 1807, 1905 |
| BspTNI | GGTCTC | 2 cut(s) | 538, 1722 |
| BsrBI | CCGCTC | 2 cut(s) | 182, 1758 |
| BsrFI | RCCGGY | 2 cut(s) | 1768, 1948 |
| BsrGI | TGTACA | 1 cut(s) | 1516 |
| BsrI | ACTGG | 1 cut(s) | 595 |
| BssAI | RCCGGY | 2 cut(s) | 1768, 1948 |
| BssECI | CCNNGG | 1 cut(s) | 1371 |
| BssMI | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| BssNI | GRCGYC | 4 cut(s) | 190, 198, 210, 274 |
| BssT1I | CCWWGG | 1 cut(s) | 1371 |
| Bst2UI | CCWGG | 2 cut(s) | 831, 1506 |
| Bst4CI | ACNGT | 6 cut(s) | 28, 487, 991, 1381, 1455, 1516 |
| Bst6I | CTCTTC | 5 cut(s) | 843, 1005, 1518, 1626, 1725 |
| BstACI | GRCGYC | 4 cut(s) | 190, 198, 210, 274 |
| BstAUI | TGTACA | 1 cut(s) | 1516 |
| BstBAI | YACGTR | 1 cut(s) | 908 |
| BstBI | TTCGAA | 2 cut(s) | 1807, 1905 |
| BstDEI | CTNAG | 7 cut(s) | 19, 46, 123, 353, 693, 1461, 1558 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 636 |
| BstF5I | GGATG | 3 cut(s) | 398, 1651, 1840 |
| BstFNI | CGCG | 1 cut(s) | 1802 |
| BstKTI | GATC | 6 cut(s) | 220, 351, 571, 1396, 1441, 1791 |
| BstMAI | GTCTC | 8 cut(s) | 121, 399, 538, 692, 901, 1024, 1522, 1722 |
| BstMBI | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 911, 980 |
| BstNI | CCWGG | 2 cut(s) | 831, 1506 |
| BstSCI | CCNGG | 6 cut(s) | 70, 337, 357, 829, 1479, 1504 |
| BstUI | CGCG | 1 cut(s) | 1802 |
| BstV1I | GCAGC | 3 cut(s) | 464, 1214, 1719 |
| BstV2I | GAAGAC | 2 cut(s) | 404, 818 |
| BstX2I | RGATCY | 1 cut(s) | 348 |
| BstYI | RGATCY | 1 cut(s) | 348 |
| Bsu15I | ATCGAT | 2 cut(s) | 93, 1668 |
| BsuRI | GGCC | 4 cut(s) | 631, 953, 1637, 1892 |
| BsuTUI | ATCGAT | 2 cut(s) | 93, 1668 |
| BtgZI | GCGATG | 1 cut(s) | 93 |
| BtrI | CACGTC | 2 cut(s) | 85, 106 |
| BtsCI | GGATG | 3 cut(s) | 398, 1651, 1840 |
| BtsIMutI | CAGTG | 2 cut(s) | 178, 285 |
| BveI | ACCTGC | 1 cut(s) | 1277 |
| CciI | TCATGA | 2 cut(s) | 1015, 1354 |
| Cfr10I | RCCGGY | 2 cut(s) | 1768, 1948 |
| Cfr13I | GGNCC | 3 cut(s) | 116, 1927, 1946 |
| ClaI | ATCGAT | 2 cut(s) | 93, 1668 |
| CpoI | CGGWCCG | 1 cut(s) | 1946 |
| CseI | GACGC | 4 cut(s) | 138, 179, 263, 815 |
| Csp6I | GTAC | 3 cut(s) | 710, 1517, 1816 |
| CspAI | ACCGGT | 1 cut(s) | 1948 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 42, 77 |
| CspI | CGGWCCG | 1 cut(s) | 1946 |
| CviAII | CATG | 7 cut(s) | 977, 1016, 1355, 1489, 1583, 1888, 1923 |
| CviQI | GTAC | 3 cut(s) | 710, 1517, 1816 |
| DdeI | CTNAG | 7 cut(s) | 19, 46, 123, 353, 693, 1461, 1558 |
| DpnI | GATC | 6 cut(s) | 219, 350, 570, 1395, 1440, 1790 |
| DpnII | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 203 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 203 |
| EaeI | YGGCCR | 1 cut(s) | 1890 |
| Eam1104I | CTCTTC | 5 cut(s) | 843, 1005, 1518, 1626, 1725 |
| EarI | CTCTTC | 5 cut(s) | 843, 1005, 1518, 1626, 1725 |
| Ecl136II | GAGCTC | 1 cut(s) | 495 |
| Eco130I | CCWWGG | 1 cut(s) | 1371 |
| Eco147I | AGGCCT | 1 cut(s) | 953 |
| Eco24I | GRGCYC | 2 cut(s) | 497, 1578 |
| Eco31I | GGTCTC | 2 cut(s) | 538, 1722 |
| Eco32I | GATATC | 2 cut(s) | 1348, 1420 |
| Eco47I | GGWCC | 3 cut(s) | 116, 1927, 1946 |
| Eco53kI | GAGCTC | 1 cut(s) | 495 |
| Eco57I | CTGAAG | 5 cut(s) | 154, 366, 720, 1260, 1671 |
| Eco72I | CACGTG | 1 cut(s) | 908 |
| EcoICRI | GAGCTC | 1 cut(s) | 495 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 636 |
| EcoRII | CCWGG | 2 cut(s) | 829, 1504 |
| EcoRV | GATATC | 2 cut(s) | 1348, 1420 |
| EcoT14I | CCWWGG | 1 cut(s) | 1371 |
| EcoT38I | GRGCYC | 2 cut(s) | 497, 1578 |
| ErhI | CCWWGG | 1 cut(s) | 1371 |
| Esp3I | CGTCTC | 2 cut(s) | 121, 399 |
| FaeI | CATG | 7 cut(s) | 980, 1019, 1358, 1492, 1586, 1891, 1926 |
| FaqI | GGGAC | 3 cut(s) | 54, 400, 1940 |
| FatI | CATG | 7 cut(s) | 976, 1015, 1354, 1488, 1582, 1887, 1922 |
| FauI | CCCGC | 2 cut(s) | 1432, 1751 |
| FbaI | TGATCA | 1 cut(s) | 1393 |
| FblI | GTMKAC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 3 cut(s) | 453, 1203, 1733 |
| FokI | GGATG | 3 cut(s) | 385, 1658, 1827 |
| FriOI | GRGCYC | 2 cut(s) | 497, 1578 |
| Fsp4HI | GCNGC | 3 cut(s) | 453, 1203, 1733 |
| FspBI | CTAG | 4 cut(s) | 144, 669, 1314, 1539 |
| GluI | GCNGC | 3 cut(s) | 453, 1203, 1733 |
| GsuI | CTGGAG | 1 cut(s) | 1398 |
| HaeIII | GGCC | 4 cut(s) | 631, 953, 1637, 1892 |
| HapII | CCGG | 8 cut(s) | 72, 187, 271, 338, 359, 1480, 1769, 1949 |
| HgaI | GACGC | 4 cut(s) | 138, 179, 263, 815 |
| Hin1I | GRCGYC | 4 cut(s) | 190, 198, 210, 274 |
| Hin1II | CATG | 7 cut(s) | 980, 1019, 1358, 1492, 1586, 1891, 1926 |
| HincII | GTYRAC | 2 cut(s) | 208, 1458 |
| HindII | GTYRAC | 2 cut(s) | 208, 1458 |
| HpaII | CCGG | 8 cut(s) | 72, 187, 271, 338, 359, 1480, 1769, 1949 |
| HphI | GGTGA | 3 cut(s) | 113, 274, 1520 |
| Hpy166II | GTNNAC | 4 cut(s) | 88, 208, 1384, 1458 |
| Hpy8I | GTNNAC | 4 cut(s) | 88, 208, 1384, 1458 |
| Hpy99I | CGWCG | 6 cut(s) | 195, 209, 212, 215, 279, 305 |
| HpyAV | CCTTC | 7 cut(s) | 594, 761, 895, 964, 1458, 1588, 1787 |
| HpyCH4III | ACNGT | 6 cut(s) | 28, 487, 991, 1381, 1455, 1516 |
| HpyCH4IV | ACGT | 5 cut(s) | 84, 105, 198, 210, 907 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 419, 1735, 1874 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 911, 980 |
| HpyF3I | CTNAG | 7 cut(s) | 19, 46, 123, 353, 693, 1461, 1558 |
| HpySE526I | ACGT | 5 cut(s) | 84, 105, 198, 210, 907 |
| Hsp92I | GRCGYC | 4 cut(s) | 190, 198, 210, 274 |
| Hsp92II | CATG | 7 cut(s) | 980, 1019, 1358, 1492, 1586, 1891, 1926 |
| Ksp22I | TGATCA | 1 cut(s) | 1393 |
| Kzo9I | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| LmnI | GCTCC | 5 cut(s) | 44, 1271, 1283, 1507, 1755 |
| Lsp1109I | GCAGC | 3 cut(s) | 464, 1214, 1719 |
| LweI | GCATC | 2 cut(s) | 1636, 1660 |
| MaeI | CTAG | 4 cut(s) | 144, 669, 1314, 1539 |
| MaeII | ACGT | 5 cut(s) | 84, 105, 198, 210, 907 |
| MaeIII | GTNAC | 7 cut(s) | 101, 139, 146, 154, 194, 586, 1244 |
| MalI | GATC | 6 cut(s) | 219, 350, 570, 1395, 1440, 1790 |
| MbiI | CCGCTC | 2 cut(s) | 182, 1758 |
| MboI | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| MflI | RGATCY | 1 cut(s) | 348 |
| MhlI | GDGCHC | 2 cut(s) | 497, 1578 |
| MluCI | AATT | 7 cut(s) | 404, 445, 605, 749, 1008, 1588, 1907 |
| MlyI | GAGTC | 3 cut(s) | 950, 1236, 1405 |
| MmeI | TCCRAC | 3 cut(s) | 66, 461, 1261 |
| MroXI | GAANNNNTTC | 3 cut(s) | 27, 733, 1901 |
| MseI | TTAA | 4 cut(s) | 318, 444, 1254, 1954 |
| MspI | CCGG | 8 cut(s) | 72, 187, 271, 338, 359, 1480, 1769, 1949 |
| MspR9I | CCNGG | 6 cut(s) | 72, 339, 359, 831, 1481, 1506 |
| MvaI | CCWGG | 2 cut(s) | 831, 1506 |
| MvnI | CGCG | 1 cut(s) | 1802 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 911, 980 |
| NciI | CCSGG | 4 cut(s) | 72, 339, 359, 1481 |
| NdeII | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| NlaIII | CATG | 7 cut(s) | 980, 1019, 1358, 1492, 1586, 1891, 1926 |
| NlaIV | GGNNCC | 5 cut(s) | 40, 350, 1503, 1773, 1928 |
| NmeAIII | GCCGAG | 1 cut(s) | 1918 |
| NmuCI | GTSAC | 4 cut(s) | 101, 154, 194, 1244 |
| NspV | TTCGAA | 2 cut(s) | 1807, 1905 |
| PagI | TCATGA | 2 cut(s) | 1015, 1354 |
| PaqCI | CACCTGC | 1 cut(s) | 1277 |
| PceI | AGGCCT | 1 cut(s) | 953 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 90, 204, 213 |
| PdmI | GAANNNNTTC | 3 cut(s) | 27, 733, 1901 |
| PfeI | GAWTC | 9 cut(s) | 176, 323, 374, 433, 932, 1112, 1295, 1432, 1472 |
| PflFI | GACNNNGTC | 1 cut(s) | 391 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1214 |
| PinAI | ACCGGT | 1 cut(s) | 1948 |
| PkrI | GCNGC | 3 cut(s) | 454, 1204, 1734 |
| PleI | GAGTC | 3 cut(s) | 949, 1235, 1405 |
| PmaCI | CACGTG | 1 cut(s) | 908 |
| PmlI | CACGTG | 1 cut(s) | 908 |
| PpsI | GAGTC | 3 cut(s) | 949, 1235, 1405 |
| Ppu21I | YACGTR | 1 cut(s) | 908 |
| Psp124BI | GAGCTC | 1 cut(s) | 497 |
| Psp6I | CCWGG | 2 cut(s) | 829, 1504 |
| PspCI | CACGTG | 1 cut(s) | 908 |
| PspGI | CCWGG | 2 cut(s) | 829, 1504 |
| PspN4I | GGNNCC | 5 cut(s) | 40, 350, 1503, 1773, 1928 |
| PspPI | GGNCC | 3 cut(s) | 116, 1927, 1946 |
| PsuI | RGATCY | 1 cut(s) | 348 |
| PsyI | GACNNNGTC | 1 cut(s) | 391 |
| RsaI | GTAC | 3 cut(s) | 711, 1518, 1817 |
| RsaNI | GTAC | 3 cut(s) | 710, 1517, 1816 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1946 |
| RsrII | CGGWCCG | 1 cut(s) | 1946 |
| SacI | GAGCTC | 1 cut(s) | 497 |
| SalI | GTCGAC | 1 cut(s) | 206 |
| SaqAI | TTAA | 4 cut(s) | 318, 444, 1254, 1954 |
| SatI | GCNGC | 3 cut(s) | 453, 1203, 1733 |
| Sau3AI | GATC | 6 cut(s) | 217, 348, 568, 1393, 1438, 1788 |
| Sau96I | GGNCC | 3 cut(s) | 116, 1927, 1946 |
| SchI | GAGTC | 3 cut(s) | 950, 1236, 1405 |
| ScrFI | CCNGG | 6 cut(s) | 72, 339, 359, 831, 1481, 1506 |
| SduI | GDGCHC | 2 cut(s) | 497, 1578 |
| SfaNI | GCATC | 2 cut(s) | 1636, 1660 |
| SfuI | TTCGAA | 2 cut(s) | 1807, 1905 |
| SgrDI | CGTCGACG | 1 cut(s) | 206 |
| SinI | GGWCC | 3 cut(s) | 116, 1927, 1946 |
| SpeI | ACTAGT | 1 cut(s) | 143 |
| Sse9I | AATT | 7 cut(s) | 404, 445, 605, 749, 1008, 1588, 1907 |
| SseBI | AGGCCT | 1 cut(s) | 953 |
| SsiI | CCGC | 7 cut(s) | 180, 227, 1425, 1681, 1695, 1758, 1802 |
| SspMI | CTAG | 4 cut(s) | 144, 669, 1314, 1539 |
| SstI | GAGCTC | 1 cut(s) | 497 |
| StuI | AGGCCT | 1 cut(s) | 953 |
| StyD4I | CCNGG | 6 cut(s) | 70, 337, 357, 829, 1479, 1504 |
| StyI | CCWWGG | 1 cut(s) | 1371 |
| TaaI | ACNGT | 6 cut(s) | 28, 487, 991, 1381, 1455, 1516 |
| TaiI | ACGT | 5 cut(s) | 87, 108, 201, 213, 910 |
| TaqII | GACCGA | 1 cut(s) | 1704 |
| TasI | AATT | 7 cut(s) | 404, 445, 605, 749, 1008, 1588, 1907 |
| TatI | WGTACW | 1 cut(s) | 1516 |
| TfiI | GAWTC | 9 cut(s) | 176, 323, 374, 433, 932, 1112, 1295, 1432, 1472 |
| Tru1I | TTAA | 4 cut(s) | 318, 444, 1254, 1954 |
| Tru9I | TTAA | 4 cut(s) | 318, 444, 1254, 1954 |
| TscAI | CASTG | 2 cut(s) | 178, 292 |
| TseFI | GTSAC | 4 cut(s) | 101, 154, 194, 1244 |
| TseI | GCWGC | 3 cut(s) | 452, 1202, 1732 |
| Tsp45I | GTSAC | 4 cut(s) | 101, 154, 194, 1244 |
| TspRI | CASTG | 2 cut(s) | 178, 292 |
| Tth111I | GACNNNGTC | 1 cut(s) | 391 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1214 |
| VpaK11BI | GGWCC | 3 cut(s) | 116, 1927, 1946 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 636 |
| XapI | RAATTY | 1 cut(s) | 1588 |
| XbaI | TCTAGA | 2 cut(s) | 668, 1313 |
| XmiI | GTMKAC | 1 cut(s) | 207 |
| XmnI | GAANNNNTTC | 3 cut(s) | 27, 733, 1901 |
| XspI | CTAG | 4 cut(s) | 144, 669, 1314, 1539 |
| ZraI | GACGTC | 2 cut(s) | 199, 211 |