Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0010483

Physical Location & Seq

Genomic Coordinates Forward (+)

8636073 .. 8642958

Gene Structure 6886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00167530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGAGAGGTTTTCACAAAGAGAGAGCATTCTTTTAGGCTACAGTCCTCAAAATTCCTTCATCAACTCTGGTTCTTCGCCCCGCAGTCCCTACAACAACTCAGATGTTGATTTCCATGATGTGTTTGGTGGCCCGCCGAGGCGATCATCGATTCAAGATATGAGGTACAGCTTCAACGATGTTACAGTTACCAGTGCACCCAAAGGGGATGATGATGATGATGATGAGGAAGGTCGGTCTGAGAAGCCGGTTTTTGGGGGAGAGTCCCACAATAGAAGGCGGACTCACAGTGATGACTTCTTTGATGACATATTTAAAGCCAGCAATTCAGTGAGTTCTAGTCCGAGGAGGCTTCAACGGGACCCTTATTCTTCTTCTCCAGGTTCTCGGGTTCTAAGTCCAGCACGGCCCCTGCCGCCTAAACCGGAATCTTCTTTGGGTTCCTCACTGCCACCACAATTCAGCCTGCCTGCCAAATTGACCAAAGGGGTGGACTCTCCTCCAACAATTGGTGCCATTACTCGCACGACTTCTCTTTCTAGATTTTCAAGCCAAGCATTTCAAAGTTCTGAAAACTTGAAAAGTGACATTTGGTCTTCACTTCGCATGAGCCATTTTTCCCAGGACTTTTCTGTTACCGGTGAAGGGTCCTCAAACTTGGCCAAGACTGACAAAGATGATACAGGAGGCAATTTGGAACAGGATTCTAAGAGTTCCCAAAGTCCAACTAGGAGCAATCTGTTTCAGTTTCATTTCTCAATATACAAGTGGGCTAGCAAGCCAATGGTGATGCCTCTTAGGGGAAGGAGTGGTTCAAGAGCGCAAGCGAGTAAAAATGAGGAGCAATCAAGCACTTGTGAATACGCTGGTAACAAGAGTATTGGAAGGAAATCACCTATATCCACTCTGCCTAGTACTGATTTTACCTCCAATGATCACCCGCTGACAGATTCTACGTCGTCCAAGTTGGAAAGCAACAAACAAGAAAATGATTTCCTTCTTGATGAAAGCATTACCAACAAAGTAGAAGAACAGCCAAGTCGATTCATTGAGGAGACAATTCTTCCTGTAGTTGAATCTTCAGAAATTTTCCGCAGCCTTAGTAGTACTGTTGAAGATGTAGCTGGTGCCACTGTTTCATGCCAATGGCCGAAAAAAGATACCGATTCATGCCATTGGCCGAAAAAAGAGACCGATTCATGCCAGACTAGTGAAGATATAGAGCCTCGTCCTTTGCTTCAAACAGCTTGTGAAGATCCACAAGAAAAAGTTCATGTGCTTATGGAACAACTGCACAAGCCTGAGATAAAACCTACTCATTCTCTGTTTTTTGATAATGATCTTGGAGAAGGAACTAAGGGGATAACTAAATTGGCTGGTAAAAAGGAAAGCCTGGTCGAAGCCACCAAAAAATCATCTGTAGATGTTGGTTCTAGTAGAAATGTGAAAACTCAGAATGGAAAAAGAAGTTCCTTGACTAATGTTCAAGTCGATAAAGCTGGTGTCCAAGGTTCACTTCAGAAATTGGGAGACAATCTTGGGAGAAACAAAGTCAAGGGAACTGTTAAGGATTTTGTTAAAATGTTCAACCAAGAAGCATTGTCAAAACCCAAAGATGATGATGACTTTGGAAGTTGGCGCTTTAAACGGAAGGAGAAAAATCCTATTGAATCGGTGAATGAAGCAAGTATAAGCAGAACTATAATGCATGAGGAATTACAAAATTCCAATGTGAAGAAAACATTTCCAGATGCTTCTTCCATCAAGATAAAAGAAGATCTCAAACGTTCAGAGAAAGAAGCTTTTGAAGGAAAGACTGCTAGCTTTATCCTTAATAATGTTCCTAAGCAGTATGCCTCAGCTTCAAGTACTGGATCAGTTGCCAACTGCTCTAAGGCAAATACTGAAGATTTAGATGAGTCCTTCCATGAAAACTTCCAGATCAAAGAATTAACTCAAGGTGAGAAGAAACCGCCAGTAGTTGGCAATAATCATGAAGAGTTGCAGGTCATTGATGCTAAAATCCGGCAGTGGTCAAAGGGAAAGGAAGGAAACCTACGCTCACTGCTCACTACTATGCAACATATTGTTTGGCCTGAGAGCGGGTGGAAGACTGTACCTCTAGTTGATATAATTGAAGGTAATGCTGTGAAAAGATCATATCAAAGGGCTTTACTCTGTCTACACCCAGATAAACTACAACAGAAAGGAGCTACTTCACAACAGAAATACATTGCAGAAAAAGTCTTTGATATCTTGCAGGAGGCCTGGGATCACTTCAACTCGCTTGGTCCACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006897 GO:0006898 GO:0006996 GO:0007010 GO:0007015 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0016192 GO:0019750 GO:0030029 GO:0030036 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071840 GO:0097435 GO:0098657 GO:0104004

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

766

Amino Acids

85.19

Weight (kDa)

6.3

Isoelectric Point (pI)

60.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010483)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75100
fragaria_vesca	FvH4_2g40090
malus_domestica	MD08G1032500.v1.1 MD15G1029200.v1.1
prunus_persica	Prupe.1G382200_v2.0.a1 Prupe.1G382200_v2.0.a1
pyrus_communis	pycom08g02580 pycom15g02590
rosa_chinensis	RchiOBHm_Chr6g0300651
rosa_laevigata	RLG00000011314
rosa_multiflora	Rmu_co8005646.1_g000001 Rmu_sc0004226.1_g000015 Rmu_sc0014374.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167530
rosa_rugosa	Rorug06G0298200
rosa_samantha	Rh6AG410800 Rh6BG418000 Rh6CG425500 Rh6DG410900
rosa_wichuraiana	Rw0G002200 Rw6G035940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1996
AccB1I	GGYRCC	2 cut(s)	512, 1127
AccB7I	CCANNNNNTGG	2 cut(s)	509, 1982
AccBSI	CCGCTC	1 cut(s)	2103
AccI	GTMKAC	1 cut(s)	2182
AciI	CCGC	8 cut(s)	82, 134, 280, 416, 941, 1093, 1973, 2103
AclI	AACGTT	1 cut(s)	1786
AclWI	GGATC	3 cut(s)	1250, 1882, 2280
AcoI	YGGCCR	3 cut(s)	660, 1148, 1178
AcsI	RAATTY	3 cut(s)	52, 1086, 1723
AcuI	CTGAAG	3 cut(s)	1065, 1502, 1926
AfaI	GTAC	5 cut(s)	167, 916, 1108, 1870, 2118
AfiI	CCNNNNNNNGG	6 cut(s)	254, 509, 645, 800, 1982, 2102
AgeI	ACCGGT	1 cut(s)	638
AhdI	GACNNNNNGTC	1 cut(s)	592
AhlI	ACTAGT	1 cut(s)	1208
AjnI	CCWGG	4 cut(s)	379, 621, 1392, 2267
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
AluBI	AGCT	8 cut(s)	171, 1124, 1247, 1499, 1802, 1824, 1862, 2213
AluI	AGCT	8 cut(s)	171, 1124, 1247, 1499, 1802, 1824, 1862, 2213
Alw21I	GWGCWC	1 cut(s)	199
Alw26I	GTCTC	3 cut(s)	1049, 1184, 1524
Alw44I	GTGCAC	1 cut(s)	195
AlwI	GGATC	3 cut(s)	1250, 1882, 2280
Ama87I	CYCGRG	1 cut(s)	387
AoxI	GGCC	7 cut(s)	130, 407, 660, 1148, 1178, 2093, 2265
ApaLI	GTGCAC	1 cut(s)	195
ApeKI	GCWGC	1 cut(s)	1095
ApoI	RAATTY	3 cut(s)	52, 1086, 1723
AsiGI	ACCGGT	1 cut(s)	638
Asp700I	GAANNNNTTC	1 cut(s)	1269
AspLEI	GCGC	2 cut(s)	823, 1641
AspS9I	GGNCC	5 cut(s)	131, 361, 408, 648, 2291
AsuHPI	GGTGA	6 cut(s)	653, 799, 885, 929, 1687, 1973
AsuNHI	GCTAGC	2 cut(s)	773, 1820
AvaI	CYCGRG	1 cut(s)	387
AvaII	GGWCC	3 cut(s)	361, 648, 2291
BaeGI	GKGCMC	1 cut(s)	199
BalI	TGGCCA	1 cut(s)	662
BanI	GGYRCC	2 cut(s)	512, 1127
BarI	GAAGNNNNNNTAC	2 cut(s)	2040, 2072
BbsI	GAAGAC	2 cut(s)	588, 2117
Bbv12I	GWGCWC	1 cut(s)	199
BbvCI	CCTCAGC	1 cut(s)	1858
BbvI	GCAGC	1 cut(s)	1107
BccI	CCATC	1 cut(s)	1769
BceAI	ACGGC	1 cut(s)	422
BciT130I	CCWGG	4 cut(s)	381, 623, 1394, 2269
BclI	TGATCA	1 cut(s)	934
BcoDI	GTCTC	3 cut(s)	1049, 1184, 1524
BcuI	ACTAGT	1 cut(s)	1208
BfaI	CTAG	9 cut(s)	339, 540, 729, 774, 912, 1209, 1434, 1821, 2123
BfmI	CTRYAG	3 cut(s)	40, 1068, 1419
BfoI	RGCGCY	1 cut(s)	1642
BfuAI	ACCTGC	1 cut(s)	1996
BglII	AGATCT	1 cut(s)	1777
BisI	GCNGC	2 cut(s)	416, 1096
BlsI	GCNGC	2 cut(s)	417, 1097
BmcAI	AGTACT	3 cut(s)	916, 1108, 1870
Bme1390I	CCNGG	4 cut(s)	381, 623, 1394, 2269
Bme18I	GGWCC	3 cut(s)	361, 648, 2291
BmeRI	GACNNNNNGTC	1 cut(s)	592
BmeT110I	CYCGRG	1 cut(s)	387
BmgT120I	GGNCC	5 cut(s)	131, 361, 408, 648, 2291
BmiI	GGNNCC	7 cut(s)	362, 363, 410, 442, 514, 649, 1129
BmrFI	CCNGG	4 cut(s)	381, 623, 1394, 2269
BmsI	GCATC	3 cut(s)	780, 1741, 2005
BmtI	GCTAGC	2 cut(s)	777, 1824
BpiI	GAAGAC	2 cut(s)	588, 2117
BpmI	CTGGAG	1 cut(s)	363
Bpu10I	CCTNAGC	2 cut(s)	1845, 1858
BpuEI	CTTGAG	1 cut(s)	1941
Bsa29I	ATCGAT	1 cut(s)	149
BsaBI	GATNNNNATC	1 cut(s)	1338
BsaI	GGTCTC	1 cut(s)	1184
BsaJI	CCNNGG	5 cut(s)	137, 344, 621, 1507, 2268
BsaWI	WCCGGW	2 cut(s)	424, 638
Bsc4I	CCNNNNNNNGG	6 cut(s)	254, 509, 645, 800, 1982, 2102
Bse118I	RCCGGY	2 cut(s)	247, 638
Bse1I	ACTGG	3 cut(s)	192, 1876, 1976
Bse3DI	GCAATG	1 cut(s)	2232
Bse8I	GATNNNNATC	1 cut(s)	1338
BseBI	CCWGG	4 cut(s)	381, 623, 1394, 2269
BseCI	ATCGAT	1 cut(s)	149
BseDI	CCNNGG	5 cut(s)	137, 344, 621, 1507, 2268
BseGI	GGATG	1 cut(s)	214
BseJI	GATNNNNATC	1 cut(s)	1338
BseLI	CCNNNNNNNGG	6 cut(s)	254, 509, 645, 800, 1982, 2102
BseMI	GCAATG	1 cut(s)	2232
BseMII	CTCAG	6 cut(s)	114, 231, 1293, 1466, 1872, 2088
BseNI	ACTGG	3 cut(s)	192, 1876, 1976
BseRI	GAGGAG	4 cut(s)	361, 489, 854, 1067
BseSI	GKGCMC	1 cut(s)	199
BseXI	GCAGC	1 cut(s)	1107
BsgI	GTGCAG	1 cut(s)	1277
BshFI	GGCC	7 cut(s)	132, 409, 662, 1150, 1180, 2095, 2267
BshNI	GGYRCC	2 cut(s)	512, 1127
BshTI	ACCGGT	1 cut(s)	638
BshVI	ATCGAT	1 cut(s)	149
BsiHKAI	GWGCWC	1 cut(s)	199
BsiHKCI	CYCGRG	1 cut(s)	387
BsiSI	CCGG	4 cut(s)	248, 425, 639, 2026
BslFI	GGGAC	3 cut(s)	72, 250, 374
BslI	CCNNNNNNNGG	6 cut(s)	254, 509, 645, 800, 1982, 2102
BsmAI	GTCTC	3 cut(s)	1049, 1184, 1524
BsmFI	GGGAC	3 cut(s)	72, 250, 374
BsmI	GAATGC	1 cut(s)	27
BsnI	GGCC	7 cut(s)	132, 409, 662, 1150, 1180, 2095, 2267
Bso31I	GGTCTC	1 cut(s)	1184
BsoBI	CYCGRG	1 cut(s)	387
Bsp1286I	GDGCHC	1 cut(s)	199
Bsp143I	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
BspACI	CCGC	8 cut(s)	82, 134, 280, 416, 941, 1093, 1973, 2103
BspANI	GGCC	7 cut(s)	132, 409, 662, 1150, 1180, 2095, 2267
BspCNI	CTCAG	6 cut(s)	113, 232, 1294, 1465, 1871, 2089
BspDI	ATCGAT	1 cut(s)	149
BspHI	TCATGA	1 cut(s)	1993
BspLI	GGNNCC	7 cut(s)	362, 363, 410, 442, 514, 649, 1129
BspMI	ACCTGC	1 cut(s)	1996
BspOI	GCTAGC	2 cut(s)	777, 1824
BspPI	GGATC	3 cut(s)	1250, 1882, 2280
BspT107I	GGYRCC	2 cut(s)	512, 1127
BspTNI	GGTCTC	1 cut(s)	1184
BsrBI	CCGCTC	1 cut(s)	2103
BsrDI	GCAATG	1 cut(s)	2232
BsrFI	RCCGGY	2 cut(s)	247, 638
BsrI	ACTGG	3 cut(s)	192, 1876, 1976
BssAI	RCCGGY	2 cut(s)	247, 638
BssECI	CCNNGG	5 cut(s)	137, 344, 621, 1507, 2268
BssMI	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
BssT1I	CCWWGG	1 cut(s)	1507
Bst2UI	CCWGG	4 cut(s)	381, 623, 1394, 2269
Bst4CI	ACNGT	7 cut(s)	44, 187, 290, 1111, 1135, 1564, 2116
Bst6I	CTCTTC	1 cut(s)	1992
BstC8I	GCNNGC	8 cut(s)	134, 322, 467, 471, 775, 779, 825, 1822
BstF5I	GGATG	1 cut(s)	214
BstH2I	RGCGCY	1 cut(s)	1642
BstHHI	GCGC	2 cut(s)	823, 1641
BstKTI	GATC	9 cut(s)	146, 937, 1258, 1342, 1780, 1877, 1944, 2159, 2275
BstMAI	GTCTC	3 cut(s)	1049, 1184, 1524
BstMBI	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
BstMWI	GCNNNNNNNGC	1 cut(s)	415
BstNI	CCWGG	4 cut(s)	381, 623, 1394, 2269
BstSCI	CCNGG	4 cut(s)	379, 621, 1392, 2267
BstSFI	CTRYAG	3 cut(s)	40, 1068, 1419
BstSLI	GKGCMC	1 cut(s)	199
BstV1I	GCAGC	1 cut(s)	1107
BstV2I	GAAGAC	2 cut(s)	588, 2117
BstX2I	RGATCY	2 cut(s)	1255, 1777
BstXI	CCANNNNNNTGG	1 cut(s)	490
BstYI	RGATCY	2 cut(s)	1255, 1777
Bsu15I	ATCGAT	1 cut(s)	149
BsuRI	GGCC	7 cut(s)	132, 409, 662, 1150, 1180, 2095, 2267
BsuTUI	ATCGAT	1 cut(s)	149
BtsCI	GGATG	1 cut(s)	214
BtsI	GCAGTG	3 cut(s)	446, 2036, 2063
BtsIMutI	CAGTG	7 cut(s)	199, 295, 336, 446, 1131, 2036, 2063
BveI	ACCTGC	1 cut(s)	1996
Cac8I	GCNNGC	8 cut(s)	134, 322, 467, 471, 775, 779, 825, 1822
CciI	TCATGA	1 cut(s)	1993
CfoI	GCGC	2 cut(s)	823, 1641
Cfr10I	RCCGGY	2 cut(s)	247, 638
Cfr13I	GGNCC	5 cut(s)	131, 361, 408, 648, 2291
ClaI	ATCGAT	1 cut(s)	149
Csp6I	GTAC	5 cut(s)	166, 915, 1107, 1869, 2117
CspAI	ACCGGT	1 cut(s)	638
CviAII	CATG	9 cut(s)	116, 607, 1140, 1170, 1200, 1274, 1709, 1928, 1994
CviQI	GTAC	5 cut(s)	166, 915, 1107, 1869, 2117
DpnI	GATC	9 cut(s)	145, 936, 1257, 1341, 1779, 1876, 1943, 2158, 2274
DpnII	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
DraI	TTTAAA	2 cut(s)	316, 1645
DriI	GACNNNNNGTC	1 cut(s)	592
EaeI	YGGCCR	3 cut(s)	660, 1148, 1178
Eam1104I	CTCTTC	1 cut(s)	1992
Eam1105I	GACNNNNNGTC	1 cut(s)	592
EarI	CTCTTC	1 cut(s)	1992
EciI	GGCGGA	1 cut(s)	295
Eco130I	CCWWGG	1 cut(s)	1507
Eco147I	AGGCCT	1 cut(s)	2267
Eco31I	GGTCTC	1 cut(s)	1184
Eco32I	GATATC	1 cut(s)	2254
Eco47I	GGWCC	3 cut(s)	361, 648, 2291
Eco57I	CTGAAG	3 cut(s)	1065, 1502, 1926
Eco88I	CYCGRG	1 cut(s)	387
EcoO109I	RGGNCCY	2 cut(s)	361, 648
EcoRII	CCWGG	4 cut(s)	379, 621, 1392, 2267
EcoRV	GATATC	1 cut(s)	2254
EcoT14I	CCWWGG	1 cut(s)	1507
EcoT22I	ATGCAT	1 cut(s)	1710
ErhI	CCWWGG	1 cut(s)	1507
FaeI	CATG	9 cut(s)	119, 610, 1143, 1173, 1203, 1277, 1712, 1931, 1997
FalI	AAGNNNNNCTT	2 cut(s)	1500, 1532
FaqI	GGGAC	3 cut(s)	72, 250, 374
FatI	CATG	9 cut(s)	115, 606, 1139, 1169, 1199, 1273, 1708, 1927, 1993
FauI	CCCGC	4 cut(s)	89, 141, 948, 2096
FbaI	TGATCA	1 cut(s)	934
FblI	GTMKAC	1 cut(s)	2182
Fnu4HI	GCNGC	2 cut(s)	416, 1096
FokI	GGATG	1 cut(s)	221
Fsp4HI	GCNGC	2 cut(s)	416, 1096
FspBI	CTAG	9 cut(s)	339, 540, 729, 774, 912, 1209, 1434, 1821, 2123
GlaI	GCGC	2 cut(s)	822, 1640
GluI	GCNGC	2 cut(s)	416, 1096
GsuI	CTGGAG	1 cut(s)	363
HaeII	RGCGCY	1 cut(s)	1642
HaeIII	GGCC	7 cut(s)	132, 409, 662, 1150, 1180, 2095, 2267
HapII	CCGG	4 cut(s)	248, 425, 639, 2026
HhaI	GCGC	2 cut(s)	823, 1641
Hin1II	CATG	9 cut(s)	119, 610, 1143, 1173, 1203, 1277, 1712, 1931, 1997
Hin6I	GCGC	2 cut(s)	821, 1639
HinP1I	GCGC	2 cut(s)	821, 1639
HindIII	AAGCTT	1 cut(s)	1800
HpaII	CCGG	4 cut(s)	248, 425, 639, 2026
HphI	GGTGA	6 cut(s)	653, 799, 885, 929, 1687, 1973
Hpy166II	GTNNAC	5 cut(s)	197, 493, 1514, 2183, 2294
Hpy188I	TCNGA	8 cut(s)	103, 241, 345, 571, 1084, 1455, 1521, 1792
Hpy188III	TCNNGA	8 cut(s)	155, 540, 816, 1001, 1748, 1765, 1939, 1994
Hpy8I	GTNNAC	5 cut(s)	197, 493, 1514, 2183, 2294
Hpy99I	CGWCG	1 cut(s)	961
HpyCH4III	ACNGT	7 cut(s)	44, 187, 290, 1111, 1135, 1564, 2116
HpyCH4IV	ACGT	2 cut(s)	956, 1786
HpyCH4V	TGCA	7 cut(s)	197, 1294, 1708, 2005, 2080, 2237, 2260
HpyF10VI	GCNNNNNNNGC	1 cut(s)	415
HpySE526I	ACGT	2 cut(s)	956, 1786
Hsp92II	CATG	9 cut(s)	119, 610, 1143, 1173, 1203, 1277, 1712, 1931, 1997
HspAI	GCGC	2 cut(s)	821, 1639
KflI	GGGWCCC	1 cut(s)	361
Ksp22I	TGATCA	1 cut(s)	934
Kzo9I	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
LmnI	GCTCC	3 cut(s)	732, 841, 2210
Lsp1109I	GCAGC	1 cut(s)	1107
LweI	GCATC	3 cut(s)	780, 1741, 2005
MaeI	CTAG	9 cut(s)	339, 540, 729, 774, 912, 1209, 1434, 1821, 2123
MaeII	ACGT	2 cut(s)	956, 1786
MaeIII	GTNAC	5 cut(s)	181, 187, 584, 634, 869
MalI	GATC	9 cut(s)	145, 936, 1257, 1341, 1779, 1876, 1943, 2158, 2274
MbiI	CCGCTC	1 cut(s)	2103
MboI	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
MfeI	CAATTG	1 cut(s)	507
MflI	RGATCY	2 cut(s)	1255, 1777
MhlI	GDGCHC	1 cut(s)	199
MlsI	TGGCCA	1 cut(s)	662
MluNI	TGGCCA	1 cut(s)	662
MlyI	GAGTC	4 cut(s)	272, 277, 488, 1928
MmeI	TCCRAC	3 cut(s)	527, 749, 948
Mox20I	TGGCCA	1 cut(s)	662
Mph1103I	ATGCAT	1 cut(s)	1710
MroXI	GAANNNNTTC	1 cut(s)	1269
MscI	TGGCCA	1 cut(s)	662
MseI	TTAA	6 cut(s)	315, 1566, 1578, 1644, 1833, 1952
MslI	CAYNNNNRTG	3 cut(s)	291, 1144, 2075
Msp20I	TGGCCA	1 cut(s)	662
MspA1I	CMGCKG	1 cut(s)	943
MspI	CCGG	4 cut(s)	248, 425, 639, 2026
MspR9I	CCNGG	4 cut(s)	381, 623, 1394, 2269
MunI	CAATTG	1 cut(s)	507
Mva1269I	GAATGC	1 cut(s)	27
MvaI	CCWGG	4 cut(s)	381, 623, 1394, 2269
MwoI	GCNNNNNNNGC	1 cut(s)	415
NdeII	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
NheI	GCTAGC	2 cut(s)	773, 1820
NlaIII	CATG	9 cut(s)	119, 610, 1143, 1173, 1203, 1277, 1712, 1931, 1997
NlaIV	GGNNCC	7 cut(s)	362, 363, 410, 442, 514, 649, 1129
NmeAIII	GCCGAG	1 cut(s)	162
NmuCI	GTSAC	1 cut(s)	584
NsiI	ATGCAT	1 cut(s)	1710
PagI	TCATGA	1 cut(s)	1993
PceI	AGGCCT	1 cut(s)	2267
PctI	GAATGC	1 cut(s)	27
PdmI	GAANNNNTTC	1 cut(s)	1269
PfeI	GAWTC	9 cut(s)	151, 428, 704, 950, 1044, 1076, 1166, 1196, 1670
PflMI	CCANNNNNTGG	2 cut(s)	509, 1982
PinAI	ACCGGT	1 cut(s)	638
PkrI	GCNGC	2 cut(s)	417, 1097
PleI	GAGTC	4 cut(s)	271, 277, 488, 1927
PpsI	GAGTC	4 cut(s)	271, 277, 488, 1927
PpuMI	RGGWCCY	2 cut(s)	361, 648
Psp1406I	AACGTT	1 cut(s)	1786
Psp5II	RGGWCCY	2 cut(s)	361, 648
Psp6I	CCWGG	4 cut(s)	379, 621, 1392, 2267
PspGI	CCWGG	4 cut(s)	379, 621, 1392, 2267
PspN4I	GGNNCC	7 cut(s)	362, 363, 410, 442, 514, 649, 1129
PspPI	GGNCC	5 cut(s)	131, 361, 408, 648, 2291
PspPPI	RGGWCCY	2 cut(s)	361, 648
PsuI	RGATCY	2 cut(s)	1255, 1777
RsaI	GTAC	5 cut(s)	167, 916, 1108, 1870, 2118
RsaNI	GTAC	5 cut(s)	166, 915, 1107, 1869, 2117
RseI	CAYNNNNRTG	3 cut(s)	291, 1144, 2075
SaqAI	TTAA	6 cut(s)	315, 1566, 1578, 1644, 1833, 1952
SatI	GCNGC	2 cut(s)	416, 1096
Sau3AI	GATC	9 cut(s)	143, 934, 1255, 1339, 1777, 1874, 1941, 2156, 2272
Sau96I	GGNCC	5 cut(s)	131, 361, 408, 648, 2291
ScaI	AGTACT	3 cut(s)	916, 1108, 1870
SchI	GAGTC	4 cut(s)	272, 277, 488, 1928
ScrFI	CCNGG	4 cut(s)	381, 623, 1394, 2269
SduI	GDGCHC	1 cut(s)	199
SfaNI	GCATC	3 cut(s)	780, 1741, 2005
SfcI	CTRYAG	3 cut(s)	40, 1068, 1419
SinI	GGWCC	3 cut(s)	361, 648, 2291
SmiMI	CAYNNNNRTG	3 cut(s)	291, 1144, 2075
SmlI	CTYRAG	1 cut(s)	1956
SmoI	CTYRAG	1 cut(s)	1956
SpeI	ACTAGT	1 cut(s)	1208
SseBI	AGGCCT	1 cut(s)	2267
SsiI	CCGC	8 cut(s)	82, 134, 280, 416, 941, 1093, 1973, 2103
SspMI	CTAG	9 cut(s)	339, 540, 729, 774, 912, 1209, 1434, 1821, 2123
StuI	AGGCCT	1 cut(s)	2267
StyD4I	CCNGG	4 cut(s)	379, 621, 1392, 2267
StyI	CCWWGG	1 cut(s)	1507
TaaI	ACNGT	7 cut(s)	44, 187, 290, 1111, 1135, 1564, 2116
TaiI	ACGT	2 cut(s)	959, 1789
TaqI	TCGA	4 cut(s)	149, 1042, 1398, 1491
TaqII	GACCGA	2 cut(s)	225, 1208
TatI	WGTACW	3 cut(s)	914, 1106, 1868
TauI	GCSGC	1 cut(s)	418
TfiI	GAWTC	9 cut(s)	151, 428, 704, 950, 1044, 1076, 1166, 1196, 1670
Tru1I	TTAA	6 cut(s)	315, 1566, 1578, 1644, 1833, 1952
Tru9I	TTAA	6 cut(s)	315, 1566, 1578, 1644, 1833, 1952
TscAI	CASTG	7 cut(s)	199, 295, 336, 453, 1138, 2036, 2070
TseFI	GTSAC	1 cut(s)	584
TseI	GCWGC	1 cut(s)	1095
Tsp45I	GTSAC	1 cut(s)	584
TspGWI	ACGGA	1 cut(s)	1663
TspRI	CASTG	7 cut(s)	199, 295, 336, 453, 1138, 2036, 2070
Van91I	CCANNNNNTGG	2 cut(s)	509, 1982
VneI	GTGCAC	1 cut(s)	195
VpaK11BI	GGWCC	3 cut(s)	361, 648, 2291
XapI	RAATTY	3 cut(s)	52, 1086, 1723
XbaI	TCTAGA	1 cut(s)	539
XcmI	CCANNNNNNNNNTGG	1 cut(s)	122
XmiI	GTMKAC	1 cut(s)	2182
XmnI	GAANNNNTTC	1 cut(s)	1269
XspI	CTAG	9 cut(s)	339, 540, 729, 774, 912, 1209, 1434, 1821, 2123
ZrmI	AGTACT	3 cut(s)	916, 1108, 1870
Zsp2I	ATGCAT	1 cut(s)	1710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.