AT1G75370

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
28276281 .. 28280033
3753 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G75370.1

Sequence Viewer

Length: 1839 bp
ATGTCAGGCTCTCTTGATCGATTTGCGAGACCTTGTTTTGAAGGAGTTTCAAGCAATGATGAGAGAAGAGAAAGGAGATCAGATTTCGAAGTTTCAGAGGATGAGAAGAAGACAAGAATCGGGAATTTCAATTTCAAGAAGAAAGCTGCGAAAGCTTCGAGCAAACTCAGACATTCGTTGAAGAAGAAAGGTAGCAGTAGGAGAAGAAGCAGTGATCGTACTTTCTCTCTTACCATTGAAGATATTCATGATGTTGAGGAATTGCGAGCTGTTGATGAATTCCGTAATTTACTCGTCTCTGAGAATTTGCTTCCTCCTACACTTGATGATTATCACATCATGCTGAGATTCTTGAAAGCTAGGAAATTTGATATTGGGAAAACCAAGTTAATGTGGAGTAATATGATCAAATGGAGAAAAGATTTTGGTACTGACACCATTTTCGAGGATTTTGAATTTGAAGAGTTTGATGAAGTTCTGAAATACTACCCTCATGGTTATCATGGTGTTGATAAAGAAGGAAGGCCTGTTTACATTGAAAGATTAGGACTAGTTGATCCGGCCAAGCTCATGCAAGTCACTACAGTGGAAAGATTCATAAGGTATCATGTTCGAGAGTTTGAGAAAACTGTCAACATAAAGCTTCCAGCTTGCTGCATTGCTGCTAAGAGACATATTGACTCTAGCACAACAATTCTAGATGTCCAAGGCGTGGGGTTCAAGAATTTCTCTAAGCCTGCGAGGGATCTCATAATCCAGCTGCAAAAGATTGATAACGATAACTACCCTGAGACACTTCATCGTATGTTCATCATCAATGGTGGTTCTGGTTTTAAGCTAGTCTGGGCCACAGTGAAACAGTTTCTTGATCCAAAAACAGTCACGAAGATTCATGTCATTGGTAACAAGTACCAAAACAAACTACTTGAGATCATTGATGCAAGCCAGCTGCCAGATTTTCTTGGTGGCACTTGCACCTGTGCAGATCGAGGTGGTTGTATGAGATCTGATAAAGGCCCCTGGAATGACCCTGAGATATTAAAGATGCTTCAAAGTGGTGGACCGCTCTGCAGGCATAATTCGGCTCTAAACAGTTTTTCCCGTGTGTCTTCATGCGATAAGCCATCTTTTTCTGGGATAAAAGCTAGTGACACCTCGACAGCAGAATCAGGGTCTGAAGTGGAAGAGATGGCTTCTCCAAAAGTAAATAGAGAGCTTCGTGTTCCCAAGCTGACTCCTGTTTGTGAAGATATTAGGGGCACTGCTATATCATATCCTACTGACTCATCAGAGTATGATTCACCAATGGTGGACAAAGTCGTGGATGTTGCTTGGATGGCCCATGAAAAGCCAAAGGCTTCAAAAGGTTCAGAGGATACACCCGATTCGGGCAAAATAAGAACGGTTACTTATATCTGGAGGTGGCTAATGATGTTCTTTGTAAACTTGTTTACGCTTCTCATATCTTTGGCTCTGCCACAGAGAGAAGGACACTCCCAGTCTGAATCTTCAGTTGATGGACCAAACGCTAGAGAGTCTCGTCCTCCTTCACCGGCTTTTGCAACTATCGCAGAGAGAAATGTGTTTTCTTCTGTTGTAAACAGACTAGGAGATCTTGAGAAACAGGTAGAAACACTGCACTCGAAGCGTCATGAGATGCCGCGTGAGAAAGAGGAGTTGCTTAATACAGCTGTTTATCGCGTGGATGCACTTGAAGCAGAGCTCATCGCTACAAAAAAGGCTTTACATGAGGCTTTAATGAGACAAGATGATCTTTTGGCTTACATAGACCGTGAAGAAGACGAGAAGTATCACAAGAAAAAGAAGGTGTGCTGGTGA

Protein Analysis

612

Amino Acids

69.95

Weight (kDa)

8.15

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO PF00650 161 - 323 8.9e-32 CRAL/TRIO domain
CRAL_TRIO_2 PF13716 232 - 325 6e-06 Divergent CRAL/TRIO domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 712
AccBSI CCGCTC 1 cut(s) 1066
AccII CGCG 2 cut(s) 1663, 1701
AciI CCGC 2 cut(s) 1064, 1661
AclWI GGATC 3 cut(s) 551, 753, 863
AcoI YGGCCR 1 cut(s) 561
AcsI RAATTY 6 cut(s) 124, 278, 304, 365, 455, 724
AcuI CTGAAG 2 cut(s) 1197, 1494
AfaI GTAC 3 cut(s) 220, 430, 911
AfiI CCNNNNNNNGG 2 cut(s) 712, 1388
AhlI ACTAGT 1 cut(s) 550
AjnI CCWGG 1 cut(s) 1019
AleI CACNNNNGTG 1 cut(s) 584
Alw21I GWGCWC 1 cut(s) 1725
Alw26I GTCTC 6 cut(s) 22, 301, 664, 785, 1542, 1756
AlwI GGATC 3 cut(s) 551, 753, 863
AlwNI CAGNNNCTG 1 cut(s) 1175
AoxI GGCC 5 cut(s) 524, 561, 846, 1015, 1338
ApeKI GCWGC 5 cut(s) 146, 654, 662, 760, 949
ApoI RAATTY 6 cut(s) 124, 278, 304, 365, 455, 724
ArsI GACNNNNNNTTYG 2 cut(s) 425, 457
Asp700I GAANNNNTTC 1 cut(s) 243
AspS9I GGNCC 5 cut(s) 846, 1016, 1061, 1339, 1520
AsuHPI GGTGA 2 cut(s) 1293, 1542
AsuII TTCGAA 1 cut(s) 87
AvaII GGWCC 2 cut(s) 1061, 1520
BaeGI GKGCMC 1 cut(s) 1262
BanII GRGCYC 1 cut(s) 1725
BbsI GAAGAC 3 cut(s) 116, 1101, 1806
Bbv12I GWGCWC 1 cut(s) 1725
BbvI GCAGC 5 cut(s) 133, 641, 649, 747, 936
BccI CCATC 4 cut(s) 1132, 1183, 1330, 1511
BciT130I CCWGG 1 cut(s) 1021
BciVI GTATCC 1 cut(s) 1369
BclI TGATCA 1 cut(s) 405
BcoDI GTCTC 6 cut(s) 22, 301, 664, 785, 1542, 1756
BcuI ACTAGT 1 cut(s) 550
BfaI CTAG 8 cut(s) 360, 551, 684, 698, 839, 1146, 1530, 1607
BfmI CTRYAG 2 cut(s) 582, 1069
BfuI GTATCC 1 cut(s) 1369
BglII AGATCT 2 cut(s) 1004, 1612
BisI GCNGC 6 cut(s) 147, 655, 663, 761, 950, 1661
BlsI GCNGC 6 cut(s) 148, 656, 664, 762, 951, 1662
Bme1390I CCNGG 1 cut(s) 1021
Bme18I GGWCC 2 cut(s) 1061, 1520
BmgT120I GGNCC 5 cut(s) 846, 1016, 1061, 1339, 1520
BmiI GGNNCC 1 cut(s) 1018
BmrFI CCNGG 1 cut(s) 1021
BmrI ACTGGG 1 cut(s) 1492
BmsI GCATC 4 cut(s) 928, 1035, 1647, 1696
BmuI ACTGGG 1 cut(s) 1492
BpiI GAAGAC 3 cut(s) 116, 1101, 1806
BpmI CTGGAG 1 cut(s) 1438
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 2 cut(s) 947, 1637
Bsa29I ATCGAT 1 cut(s) 19
BsaBI GATNNNNATC 1 cut(s) 330
BsaI GGTCTC 1 cut(s) 22
BsaJI CCNNGG 2 cut(s) 706, 1019
Bsc4I CCNNNNNNNGG 2 cut(s) 712, 1388
Bse118I RCCGGY 1 cut(s) 1552
Bse1I ACTGG 1 cut(s) 1498
Bse3DI GCAATG 2 cut(s) 61, 657
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 1 cut(s) 1021
BseCI ATCGAT 1 cut(s) 19
BseDI CCNNGG 2 cut(s) 706, 1019
BseGI GGATG 4 cut(s) 106, 1330, 1341, 1711
BseJI GATNNNNATC 1 cut(s) 330
BseLI CCNNNNNNNGG 2 cut(s) 712, 1388
BseMI GCAATG 2 cut(s) 61, 657
BseMII CTCAG 5 cut(s) 181, 291, 335, 780, 1023
BseNI ACTGG 1 cut(s) 1498
BseRI GAGGAG 1 cut(s) 1688
BseSI GKGCMC 1 cut(s) 1262
BseXI GCAGC 5 cut(s) 133, 641, 649, 747, 936
BsgI GTGCAG 2 cut(s) 1002, 1622
Bsh1236I CGCG 2 cut(s) 1663, 1701
BshFI GGCC 5 cut(s) 526, 563, 848, 1017, 1340
BshVI ATCGAT 1 cut(s) 19
BsiHKAI GWGCWC 1 cut(s) 1725
BsiSI CCGG 2 cut(s) 560, 1553
BslI CCNNNNNNNGG 2 cut(s) 712, 1388
BsmAI GTCTC 6 cut(s) 22, 301, 664, 785, 1542, 1756
BsmBI CGTCTC 1 cut(s) 301
BsnI GGCC 5 cut(s) 526, 563, 848, 1017, 1340
Bso31I GGTCTC 1 cut(s) 22
Bsp119I TTCGAA 1 cut(s) 87
Bsp1286I GDGCHC 2 cut(s) 1262, 1725
BspACI CCGC 2 cut(s) 1064, 1661
BspANI GGCC 5 cut(s) 526, 563, 848, 1017, 1340
BspCNI CTCAG 5 cut(s) 180, 292, 336, 781, 1024
BspDI ATCGAT 1 cut(s) 19
BspFNI CGCG 2 cut(s) 1663, 1701
BspHI TCATGA 2 cut(s) 247, 1651
BspLI GGNNCC 1 cut(s) 1018
BspMAI CTGCAG 1 cut(s) 1073
BspPI GGATC 3 cut(s) 551, 753, 863
BspT104I TTCGAA 1 cut(s) 87
BspTNI GGTCTC 1 cut(s) 22
BsrBI CCGCTC 1 cut(s) 1066
BsrDI GCAATG 2 cut(s) 61, 657
BsrFI RCCGGY 1 cut(s) 1552
BsrI ACTGG 1 cut(s) 1498
BssAI RCCGGY 1 cut(s) 1552
BssECI CCNNGG 2 cut(s) 706, 1019
BssT1I CCWWGG 1 cut(s) 706
Bst2UI CCWGG 1 cut(s) 1021
Bst4CI ACNGT 8 cut(s) 586, 631, 853, 861, 880, 1094, 1405, 1793
Bst6I CTCTTC 3 cut(s) 61, 456, 1179
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 6 cut(s) 267, 652, 738, 943, 947, 1073
BstDEI CTNAG 7 cut(s) 167, 300, 344, 666, 732, 789, 1032
BstF5I GGATG 4 cut(s) 106, 1330, 1341, 1711
BstFNI CGCG 2 cut(s) 1663, 1701
BstMAI GTCTC 6 cut(s) 22, 301, 664, 785, 1542, 1756
BstMWI GCNNNNNNNGC 6 cut(s) 152, 1072, 1337, 1568, 1645, 1715
BstNI CCWGG 1 cut(s) 1021
BstSCI CCNGG 1 cut(s) 1019
BstSFI CTRYAG 2 cut(s) 582, 1069
BstSLI GKGCMC 1 cut(s) 1262
BstUI CGCG 2 cut(s) 1663, 1701
BstV1I GCAGC 5 cut(s) 133, 641, 649, 747, 936
BstV2I GAAGAC 3 cut(s) 116, 1101, 1806
BstX2I RGATCY 3 cut(s) 745, 1004, 1612
BstYI RGATCY 3 cut(s) 745, 1004, 1612
Bsu15I ATCGAT 1 cut(s) 19
BsuI GTATCC 1 cut(s) 1369
BsuRI GGCC 5 cut(s) 526, 563, 848, 1017, 1340
BsuTUI ATCGAT 1 cut(s) 19
BtgZI GCGATG 1 cut(s) 1711
BtsCI GGATG 4 cut(s) 106, 1330, 1341, 1711
BtsI GCAGTG 3 cut(s) 217, 1260, 1634
BtsIMutI CAGTG 5 cut(s) 217, 591, 858, 1260, 1634
Cac8I GCNNGC 6 cut(s) 267, 652, 738, 943, 947, 1073
CaiI CAGNNNCTG 1 cut(s) 1175
CciI TCATGA 2 cut(s) 247, 1651
Cfr10I RCCGGY 1 cut(s) 1552
Cfr13I GGNCC 5 cut(s) 846, 1016, 1061, 1339, 1520
ClaI ATCGAT 1 cut(s) 19
CseI GACGC 1 cut(s) 1637
Csp6I GTAC 3 cut(s) 219, 429, 910
CviQI GTAC 3 cut(s) 219, 429, 910
DdeI CTNAG 7 cut(s) 167, 300, 344, 666, 732, 789, 1032
EaeI YGGCCR 1 cut(s) 561
Eam1104I CTCTTC 3 cut(s) 61, 456, 1179
EarI CTCTTC 3 cut(s) 61, 456, 1179
Ecl136II GAGCTC 1 cut(s) 1723
Eco130I CCWWGG 1 cut(s) 706
Eco147I AGGCCT 1 cut(s) 526
Eco24I GRGCYC 1 cut(s) 1725
Eco31I GGTCTC 1 cut(s) 22
Eco47I GGWCC 2 cut(s) 1061, 1520
Eco53kI GAGCTC 1 cut(s) 1723
Eco57I CTGAAG 2 cut(s) 1197, 1494
EcoICRI GAGCTC 1 cut(s) 1723
EcoO109I RGGNCCY 1 cut(s) 1016
EcoRI GAATTC 1 cut(s) 278
EcoRII CCWGG 1 cut(s) 1019
EcoT14I CCWWGG 1 cut(s) 706
EcoT38I GRGCYC 1 cut(s) 1725
ErhI CCWWGG 1 cut(s) 706
Esp3I CGTCTC 1 cut(s) 301
FalI AAGNNNNNCTT 2 cut(s) 1758, 1790
FbaI TGATCA 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 147, 655, 663, 761, 950, 1661
FokI GGATG 4 cut(s) 113, 1337, 1348, 1718
FriOI GRGCYC 1 cut(s) 1725
Fsp4HI GCNGC 6 cut(s) 147, 655, 663, 761, 950, 1661
FspBI CTAG 8 cut(s) 360, 551, 684, 698, 839, 1146, 1530, 1607
GluI GCNGC 6 cut(s) 147, 655, 663, 761, 950, 1661
GsuI CTGGAG 1 cut(s) 1438
HaeIII GGCC 5 cut(s) 526, 563, 848, 1017, 1340
HapII CCGG 2 cut(s) 560, 1553
HgaI GACGC 1 cut(s) 1637
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HindIII AAGCTT 2 cut(s) 153, 641
HpaII CCGG 2 cut(s) 560, 1553
HphI GGTGA 2 cut(s) 1293, 1542
Hpy166II GTNNAC 7 cut(s) 532, 634, 1061, 1312, 1444, 1452, 1600
Hpy8I GTNNAC 7 cut(s) 532, 634, 1061, 1312, 1444, 1452, 1600
HpyAV CCTTC 6 cut(s) 35, 512, 516, 1481, 1557, 1819
HpyCH4III ACNGT 8 cut(s) 586, 631, 853, 861, 880, 1094, 1405, 1793
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 1072, 1337, 1568, 1645, 1715
HpyF3I CTNAG 7 cut(s) 167, 300, 344, 666, 732, 789, 1032
Ksp22I TGATCA 1 cut(s) 405
Lsp1109I GCAGC 5 cut(s) 133, 641, 649, 747, 936
LweI GCATC 4 cut(s) 928, 1035, 1647, 1696
MaeI CTAG 8 cut(s) 360, 551, 684, 698, 839, 1146, 1530, 1607
MaeIII GTNAC 5 cut(s) 577, 880, 902, 1148, 1405
MbiI CCGCTC 1 cut(s) 1066
MflI RGATCY 3 cut(s) 745, 1004, 1612
MhlI GDGCHC 2 cut(s) 1262, 1725
MlyI GAGTC 4 cut(s) 674, 1228, 1277, 1544
MroXI GAANNNNTTC 1 cut(s) 243
MseI TTAA 5 cut(s) 389, 834, 1040, 1683, 1757
MslI CAYNNNNRTG 1 cut(s) 584
MspA1I CMGCKG 3 cut(s) 760, 949, 1691
MspI CCGG 2 cut(s) 560, 1553
MspR9I CCNGG 1 cut(s) 1021
MvaI CCWGG 1 cut(s) 1021
MvnI CGCG 2 cut(s) 1663, 1701
MwoI GCNNNNNNNGC 6 cut(s) 152, 1072, 1337, 1568, 1645, 1715
NlaIV GGNNCC 1 cut(s) 1018
NmuCI GTSAC 3 cut(s) 577, 880, 1148
NspV TTCGAA 1 cut(s) 87
OliI CACNNNNGTG 1 cut(s) 584
PagI TCATGA 2 cut(s) 247, 1651
PceI AGGCCT 1 cut(s) 526
PdmI GAANNNNTTC 1 cut(s) 243
PfeI GAWTC 8 cut(s) 117, 348, 594, 889, 1166, 1298, 1385, 1505
PflFI GACNNNGTC 1 cut(s) 1316
PflMI CCANNNNNTGG 1 cut(s) 712
PkrI GCNGC 6 cut(s) 148, 656, 664, 762, 951, 1662
PleI GAGTC 4 cut(s) 674, 1228, 1277, 1543
PpsI GAGTC 4 cut(s) 674, 1228, 1277, 1543
Psp124BI GAGCTC 1 cut(s) 1725
Psp6I CCWGG 1 cut(s) 1019
PspGI CCWGG 1 cut(s) 1019
PspN4I GGNNCC 1 cut(s) 1018
PspPI GGNCC 5 cut(s) 846, 1016, 1061, 1339, 1520
PstI CTGCAG 1 cut(s) 1073
PstNI CAGNNNCTG 1 cut(s) 1175
PsuI RGATCY 3 cut(s) 745, 1004, 1612
PsyI GACNNNGTC 1 cut(s) 1316
PvuII CAGCTG 3 cut(s) 760, 949, 1691
RsaI GTAC 3 cut(s) 220, 430, 911
RsaNI GTAC 3 cut(s) 219, 429, 910
RseI CAYNNNNRTG 1 cut(s) 584
SacI GAGCTC 1 cut(s) 1725
SaqAI TTAA 5 cut(s) 389, 834, 1040, 1683, 1757
SatI GCNGC 6 cut(s) 147, 655, 663, 761, 950, 1661
Sau96I GGNCC 5 cut(s) 846, 1016, 1061, 1339, 1520
SchI GAGTC 4 cut(s) 674, 1228, 1277, 1544
ScrFI CCNGG 1 cut(s) 1021
SduI GDGCHC 2 cut(s) 1262, 1725
SfaNI GCATC 4 cut(s) 928, 1035, 1647, 1696
SfcI CTRYAG 2 cut(s) 582, 1069
SfuI TTCGAA 1 cut(s) 87
SinI GGWCC 2 cut(s) 1061, 1520
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 2 cut(s) 926, 1616
SmoI CTYRAG 2 cut(s) 926, 1616
SpeI ACTAGT 1 cut(s) 550
SseBI AGGCCT 1 cut(s) 526
SsiI CCGC 2 cut(s) 1064, 1661
SspMI CTAG 8 cut(s) 360, 551, 684, 698, 839, 1146, 1530, 1607
SstI GAGCTC 1 cut(s) 1725
StuI AGGCCT 1 cut(s) 526
StyD4I CCNGG 1 cut(s) 1019
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 8 cut(s) 586, 631, 853, 861, 880, 1094, 1405, 1793
TaqI TCGA 8 cut(s) 19, 87, 158, 444, 613, 988, 1157, 1643
TauI GCSGC 1 cut(s) 1663
TfiI GAWTC 8 cut(s) 117, 348, 594, 889, 1166, 1298, 1385, 1505
Tru1I TTAA 5 cut(s) 389, 834, 1040, 1683, 1757
Tru9I TTAA 5 cut(s) 389, 834, 1040, 1683, 1757
TscAI CASTG 5 cut(s) 217, 591, 858, 1267, 1641
TseFI GTSAC 3 cut(s) 577, 880, 1148
TseI GCWGC 5 cut(s) 146, 654, 662, 760, 949
Tsp45I GTSAC 3 cut(s) 577, 880, 1148
TspDTI ATGAA 9 cut(s) 236, 291, 486, 586, 788, 799, 881, 1101, 1359
TspGWI ACGGA 1 cut(s) 272
TspRI CASTG 5 cut(s) 217, 591, 858, 1267, 1641
Tth111I GACNNNGTC 1 cut(s) 1316
Van91I CCANNNNNTGG 1 cut(s) 712
VpaK11BI GGWCC 2 cut(s) 1061, 1520
XapI RAATTY 6 cut(s) 124, 278, 304, 365, 455, 724
XbaI TCTAGA 1 cut(s) 697
XmnI GAANNNNTTC 1 cut(s) 243
XspI CTAG 8 cut(s) 360, 551, 684, 698, 839, 1146, 1530, 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.