Rh6BG425800

Phosphatidylinositol phosphatidylcholine transfer protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
64743675 .. 64749494
5820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG425800.1

Sequence Viewer

Length: 1410 bp
ATGTCTGGGTCTTTAGATCGATTCGCCAGGCCATGTTTTGAGGGGTTCTCTAGCCATGAGGACAGGAGAGAAAGGAATGAGGAAAGGAGAGAAAGGAAGTCGGATTTTGAGAACTCAGAAGAGGATAGGAGGACCAGAATTGGATCATTGAAGAAGAAAGCTATCAATGCGTCTAGTAAGTTCAGGCATTCGTTGAAGAAGAAGAGGAGGAAGAGCAGTGGCCGCCACACTTCTGTTTCCATTGAGGATGTGCGAGACGTCGAGGAGCTGCAGGCTGTAGATGCATTTCGACAGGTGCTTATGTCGGAAGACTTGCTACCTCCTAAGCATGATGATTATCACACGTTGCTGAGATTTCTGGTAGCAAGAAAGTTCGATATTGAGAAAGCAAAGCACATGTGGGCCAATATGATTCAATGGAGGAAAGATTTTGGTACCGACACGATTTTGGAGGATTTTGAGTTTGGTGAGTTGGATCAAGTTCGGAAGTACTACCCTCAGTGCTACCATGGTGTCGACAAGGAGGGGAGACCTGTTTATATTGAAAGATTGGGGAAAGTTGATCCCAATAAGCTTCTGCAAGTGACTTCTTTGGAGCGATATGTGAAATATCATGTGCAGGAATTTGAAAGGAGTTTTGCCATTAAGTTTCCAGCCTGCTCTATTGCTGCAAAGAGGCATATAGATTCAAGTACAACAATCTTAGATGTTCAAGGCGTGGGTTTTAAAAACTTTACCAAGTCTGCACGAGATCTCATCACGCGACTGCAGAAGATTGATAATGACAACTACCCTGAGACACTTTGCAGAATGTTTATAATCAATGCTGGTCCTGGTTTTAGGCTCCTTTGGAATACTGTTAAGACATTTCTTGATCCCAGAACCACCACCAAGATTCATGTTCTGGGTAACAAGTACCAGTCAAAATTACTTGAAGTAATTGCTGCAAGTGAGTTGCCAGAATCTCTGGGTGGTAGCTGCAACTGTTCCGACGAGGGAGGTTGTATGAGGTCTGACAAGGGGCCATGGAAGGATCCCAACATTTTAAAGATGGTACTTAGTGGTGAGGCACAATGTTTCAGACAAATAGTTACAGTTTCAAACAGTGACGGGCGGATAATTGCTTCTGATAAGCCACGTTTTGCAAATATAAGAAGTAGTGATACATCTACCGCGGAGTCAGGATCAGAAGTTGAAGAAATGGCTTCACCCAAAGCAACTAGGAGTTACTTGCAACCTAAGTTGACTCCTGTTTGTGAAGAAGCTAGGGCGGCTGGCAAAGGAAGCAGTGCTAGCAGCTTGCCCGAGTATGATGAATATGTTCCCATGGTTGACAAGGCTGTGGATATGGGATGGAAGCAACAAGTTATCCAACAAAATCCACTTGATCCTGGAGGTTCGGAAGTCTAG

Protein Analysis

469

Amino Acids

53.46

Weight (kDa)

8.55

Isoelectric Point (pI)

52.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO_N PF03765 110 - 135 3e-06 CRAL/TRIO, N-terminal domain
CRAL_TRIO PF00650 163 - 325 1.3e-31 CRAL/TRIO domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 818
AatII GACGTC 1 cut(s) 261
Acc65I GGTACC 1 cut(s) 434
AccB1I GGYRCC 1 cut(s) 434
AccI GTMKAC 1 cut(s) 516
AccII CGCG 2 cut(s) 763, 1175
AciI CCGC 5 cut(s) 223, 1114, 1173, 1175, 1271
AclWI GGATC 8 cut(s) 151, 483, 557, 869, 1028, 1041, 1192, 1382
AcoI YGGCCR 1 cut(s) 220
AcsI RAATTY 1 cut(s) 623
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 5 cut(s) 436, 491, 694, 917, 1056
AflIII ACRYGT 2 cut(s) 342, 396
AjnI CCWGG 3 cut(s) 26, 832, 1390
AluBI AGCT 6 cut(s) 161, 268, 574, 978, 1265, 1299
AluI AGCT 6 cut(s) 161, 268, 574, 978, 1265, 1299
Alw26I GTCTC 3 cut(s) 249, 523, 791
AlwI GGATC 8 cut(s) 151, 483, 557, 869, 1028, 1041, 1192, 1382
Ama87I CYCGRG 1 cut(s) 1304
AoxI GGCC 4 cut(s) 29, 220, 402, 1022
ApeKI GCWGC 5 cut(s) 268, 668, 944, 978, 1296
ApoI RAATTY 1 cut(s) 623
Asp700I GAANNNNTTC 1 cut(s) 1320
Asp718I GGTACC 1 cut(s) 434
AspS9I GGNCC 4 cut(s) 132, 402, 830, 1022
AsuHPI GGTGA 3 cut(s) 479, 1076, 1200
AsuNHI GCTAGC 1 cut(s) 1292
AvaI CYCGRG 1 cut(s) 1304
AvaII GGWCC 2 cut(s) 132, 830
BamHI GGATCC 1 cut(s) 1033
BanI GGYRCC 1 cut(s) 434
BarI GAAGNNNNNNTAC 4 cut(s) 300, 332, 1147, 1179
BauI CACGAG 1 cut(s) 747
BbsI GAAGAC 1 cut(s) 315
BbvI GCAGC 5 cut(s) 255, 655, 931, 965, 1308
BccI CCATC 2 cut(s) 1045, 1347
BciT130I CCWGG 3 cut(s) 28, 834, 1392
BcoDI GTCTC 3 cut(s) 249, 523, 791
BfaI CTAG 6 cut(s) 51, 174, 1221, 1266, 1293, 1408
BfmI CTRYAG 3 cut(s) 269, 276, 767
BglII AGATCT 1 cut(s) 751
BisI GCNGC 7 cut(s) 223, 269, 669, 945, 979, 1272, 1297
BlsI GCNGC 7 cut(s) 224, 270, 670, 946, 980, 1273, 1298
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 3 cut(s) 28, 834, 1392
Bme18I GGWCC 2 cut(s) 132, 830
BmeT110I CYCGRG 1 cut(s) 1304
BmgT120I GGNCC 4 cut(s) 132, 402, 830, 1022
BmiI GGNNCC 4 cut(s) 436, 845, 1023, 1035
BmrFI CCNGG 3 cut(s) 28, 834, 1392
BmsI GCATC 1 cut(s) 271
BmtI GCTAGC 1 cut(s) 1296
BpiI GAAGAC 1 cut(s) 315
BplI GAGNNNNNCTC 2 cut(s) 32, 64
Bpu10I CCTNAGC 1 cut(s) 324
Bsa29I ATCGAT 1 cut(s) 19
BsaBI GATNNNNATC 1 cut(s) 336
BsaHI GRCGYC 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 523
BsaJI CCNNGG 4 cut(s) 508, 1025, 1173, 1326
Bse1I ACTGG 1 cut(s) 919
Bse8I GATNNNNATC 1 cut(s) 336
BseBI CCWGG 3 cut(s) 28, 834, 1392
BseCI ATCGAT 1 cut(s) 19
BseDI CCNNGG 4 cut(s) 508, 1025, 1173, 1326
BseGI GGATG 2 cut(s) 253, 1358
BseJI GATNNNNATC 1 cut(s) 336
BseMII CTCAG 4 cut(s) 129, 341, 512, 786
BseNI ACTGG 1 cut(s) 919
BseRI GAGGAG 2 cut(s) 220, 278
BseXI GCAGC 5 cut(s) 255, 655, 931, 965, 1308
BsgI GTGCAG 2 cut(s) 638, 729
Bsh1236I CGCG 2 cut(s) 763, 1175
BshFI GGCC 4 cut(s) 31, 222, 404, 1024
BshNI GGYRCC 1 cut(s) 434
BshVI ATCGAT 1 cut(s) 19
BsiHKCI CYCGRG 1 cut(s) 1304
BsmAI GTCTC 3 cut(s) 249, 523, 791
BsmBI CGTCTC 1 cut(s) 249
BsmI GAATGC 1 cut(s) 187
BsnI GGCC 4 cut(s) 31, 222, 404, 1024
Bso31I GGTCTC 1 cut(s) 523
BsoBI CYCGRG 1 cut(s) 1304
Bsp143I GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
Bsp19I CCATGG 3 cut(s) 508, 1025, 1326
BspACI CCGC 5 cut(s) 223, 1114, 1173, 1175, 1271
BspANI GGCC 4 cut(s) 31, 222, 404, 1024
BspCNI CTCAG 4 cut(s) 128, 342, 511, 787
BspDI ATCGAT 1 cut(s) 19
BspFNI CGCG 2 cut(s) 763, 1175
BspLI GGNNCC 4 cut(s) 436, 845, 1023, 1035
BspMAI CTGCAG 2 cut(s) 273, 771
BspOI GCTAGC 1 cut(s) 1296
BspPI GGATC 8 cut(s) 151, 483, 557, 869, 1028, 1041, 1192, 1382
BspQI GCTCTTC 1 cut(s) 206
BspT107I GGYRCC 1 cut(s) 434
BspTNI GGTCTC 1 cut(s) 523
BsrI ACTGG 1 cut(s) 919
BssECI CCNNGG 4 cut(s) 508, 1025, 1173, 1326
BssMI GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
BssNI GRCGYC 1 cut(s) 258
BssSI CACGAG 1 cut(s) 747
BssT1I CCWWGG 3 cut(s) 508, 1025, 1326
Bst2BI CACGAG 1 cut(s) 747
Bst2UI CCWGG 3 cut(s) 28, 834, 1392
Bst4CI ACNGT 4 cut(s) 859, 986, 1096, 1106
Bst6I CTCTTC 3 cut(s) 114, 197, 206
BstACI GRCGYC 1 cut(s) 258
BstC8I GCNNGC 5 cut(s) 273, 658, 1276, 1294, 1301
BstDEI CTNAG 8 cut(s) 115, 324, 350, 498, 703, 795, 1058, 1239
BstDSI CCRYGG 4 cut(s) 508, 1025, 1173, 1326
BstF5I GGATG 2 cut(s) 253, 1358
BstFNI CGCG 2 cut(s) 763, 1175
BstKTI GATC 9 cut(s) 19, 146, 478, 565, 754, 877, 1036, 1187, 1390
BstMAI GTCTC 3 cut(s) 249, 523, 791
BstMBI GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
BstMWI GCNNNNNNNGC 6 cut(s) 167, 222, 281, 1271, 1284, 1293
BstNI CCWGG 3 cut(s) 28, 834, 1392
BstNSI RCATGY 1 cut(s) 400
BstSCI CCNGG 3 cut(s) 26, 832, 1390
BstSFI CTRYAG 3 cut(s) 269, 276, 767
BstUI CGCG 2 cut(s) 763, 1175
BstV1I GCAGC 5 cut(s) 255, 655, 931, 965, 1308
BstV2I GAAGAC 1 cut(s) 315
BstX2I RGATCY 2 cut(s) 751, 1033
BstYI RGATCY 2 cut(s) 751, 1033
Bsu15I ATCGAT 1 cut(s) 19
BsuRI GGCC 4 cut(s) 31, 222, 404, 1024
BsuTUI ATCGAT 1 cut(s) 19
BtgI CCRYGG 4 cut(s) 508, 1025, 1173, 1326
BtsCI GGATG 2 cut(s) 253, 1358
BtsI GCAGTG 2 cut(s) 223, 1294
BtsIMutI CAGTG 4 cut(s) 223, 506, 1111, 1294
Cac8I GCNNGC 5 cut(s) 273, 658, 1276, 1294, 1301
Cfr13I GGNCC 4 cut(s) 132, 402, 830, 1022
Cfr42I CCGCGG 1 cut(s) 1176
ClaI ATCGAT 1 cut(s) 19
CseI GACGC 1 cut(s) 159
Csp6I GTAC 5 cut(s) 435, 490, 693, 916, 1055
CviAII CATG 9 cut(s) 33, 56, 329, 397, 509, 614, 899, 1026, 1327
CviQI GTAC 5 cut(s) 435, 490, 693, 916, 1055
DdeI CTNAG 8 cut(s) 115, 324, 350, 498, 703, 795, 1058, 1239
DpnI GATC 9 cut(s) 18, 145, 477, 564, 753, 876, 1035, 1186, 1389
DpnII GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
DraI TTTAAA 2 cut(s) 727, 1047
EaeI YGGCCR 1 cut(s) 220
Eam1104I CTCTTC 3 cut(s) 114, 197, 206
EarI CTCTTC 3 cut(s) 114, 197, 206
EciI GGCGGA 1 cut(s) 1129
Eco130I CCWWGG 3 cut(s) 508, 1025, 1326
Eco31I GGTCTC 1 cut(s) 523
Eco47I GGWCC 2 cut(s) 132, 830
Eco88I CYCGRG 1 cut(s) 1304
EcoRII CCWGG 3 cut(s) 26, 832, 1390
EcoT14I CCWWGG 3 cut(s) 508, 1025, 1326
EcoT22I ATGCAT 1 cut(s) 286
ErhI CCWWGG 3 cut(s) 508, 1025, 1326
Esp3I CGTCTC 1 cut(s) 249
FaeI CATG 9 cut(s) 36, 59, 332, 400, 512, 617, 902, 1029, 1330
FatI CATG 9 cut(s) 32, 55, 328, 396, 508, 613, 898, 1025, 1326
FblI GTMKAC 1 cut(s) 516
Fnu4HI GCNGC 7 cut(s) 223, 269, 669, 945, 979, 1272, 1297
FokI GGATG 2 cut(s) 260, 1365
Fsp4HI GCNGC 7 cut(s) 223, 269, 669, 945, 979, 1272, 1297
FspBI CTAG 6 cut(s) 51, 174, 1221, 1266, 1293, 1408
GluI GCNGC 7 cut(s) 223, 269, 669, 945, 979, 1272, 1297
HaeIII GGCC 4 cut(s) 31, 222, 404, 1024
HgaI GACGC 1 cut(s) 159
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 9 cut(s) 36, 59, 332, 400, 512, 617, 902, 1029, 1330
HincII GTYRAC 3 cut(s) 517, 1245, 1333
HindII GTYRAC 3 cut(s) 517, 1245, 1333
HindIII AAGCTT 1 cut(s) 572
HinfI GANTC 7 cut(s) 21, 412, 686, 895, 962, 1178, 1246
HphI GGTGA 3 cut(s) 479, 1076, 1200
Hpy166II GTNNAC 3 cut(s) 517, 1245, 1333
Hpy188III TCNNGA 2 cut(s) 872, 1182
Hpy8I GTNNAC 3 cut(s) 517, 1245, 1333
Hpy99I CGWCG 2 cut(s) 263, 995
HpyAV CCTTC 1 cut(s) 1024
HpyCH4III ACNGT 4 cut(s) 859, 986, 1096, 1106
HpyCH4IV ACGT 3 cut(s) 258, 344, 1138
HpyF10VI GCNNNNNNNGC 6 cut(s) 167, 222, 281, 1271, 1284, 1293
HpyF3I CTNAG 8 cut(s) 115, 324, 350, 498, 703, 795, 1058, 1239
HpySE526I ACGT 3 cut(s) 258, 344, 1138
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 9 cut(s) 36, 59, 332, 400, 512, 617, 902, 1029, 1330
KpnI GGTACC 1 cut(s) 438
KspI CCGCGG 1 cut(s) 1176
Kzo9I GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
LguI GCTCTTC 1 cut(s) 206
LmnI GCTCC 3 cut(s) 265, 595, 849
Lsp1109I GCAGC 5 cut(s) 255, 655, 931, 965, 1308
LweI GCATC 1 cut(s) 271
MaeI CTAG 6 cut(s) 51, 174, 1221, 1266, 1293, 1408
MaeII ACGT 3 cut(s) 258, 344, 1138
MaeIII GTNAC 5 cut(s) 583, 908, 1090, 1106, 1226
MalI GATC 9 cut(s) 18, 145, 477, 564, 753, 876, 1035, 1186, 1389
MboI GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
MflI RGATCY 2 cut(s) 751, 1033
MluCI AATT 5 cut(s) 138, 623, 926, 939, 1119
MlyI GAGTC 2 cut(s) 1187, 1240
MmeI TCCRAC 5 cut(s) 81, 285, 453, 1014, 1396
Mph1103I ATGCAT 1 cut(s) 286
MroXI GAANNNNTTC 1 cut(s) 1320
MseI TTAA 4 cut(s) 645, 726, 861, 1046
MspA1I CMGCKG 1 cut(s) 1175
MspR9I CCNGG 3 cut(s) 28, 834, 1392
Mva1269I GAATGC 1 cut(s) 187
MvaI CCWGG 3 cut(s) 28, 834, 1392
MvnI CGCG 2 cut(s) 763, 1175
MwoI GCNNNNNNNGC 6 cut(s) 167, 222, 281, 1271, 1284, 1293
NcoI CCATGG 3 cut(s) 508, 1025, 1326
NdeII GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
NheI GCTAGC 1 cut(s) 1292
NlaIII CATG 9 cut(s) 36, 59, 332, 400, 512, 617, 902, 1029, 1330
NlaIV GGNNCC 4 cut(s) 436, 845, 1023, 1035
NmuCI GTSAC 2 cut(s) 583, 1106
NsiI ATGCAT 1 cut(s) 286
NspI RCATGY 1 cut(s) 400
PciI ACATGT 1 cut(s) 396
PciSI GCTCTTC 1 cut(s) 206
PctI GAATGC 1 cut(s) 187
PdmI GAANNNNTTC 1 cut(s) 1320
PfeI GAWTC 5 cut(s) 21, 412, 686, 895, 962
PfoI TCCNGGA 1 cut(s) 1390
PkrI GCNGC 7 cut(s) 224, 270, 670, 946, 980, 1273, 1298
PleI GAGTC 2 cut(s) 1186, 1240
PpsI GAGTC 2 cut(s) 1186, 1240
PscI ACATGT 1 cut(s) 396
PsiI TTATAA 1 cut(s) 818
Psp6I CCWGG 3 cut(s) 26, 832, 1390
PspGI CCWGG 3 cut(s) 26, 832, 1390
PspN4I GGNNCC 4 cut(s) 436, 845, 1023, 1035
PspPI GGNCC 4 cut(s) 132, 402, 830, 1022
PstI CTGCAG 2 cut(s) 273, 771
PsuI RGATCY 2 cut(s) 751, 1033
RsaI GTAC 5 cut(s) 436, 491, 694, 917, 1056
RsaNI GTAC 5 cut(s) 435, 490, 693, 916, 1055
SacII CCGCGG 1 cut(s) 1176
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 206
SaqAI TTAA 4 cut(s) 645, 726, 861, 1046
SatI GCNGC 7 cut(s) 223, 269, 669, 945, 979, 1272, 1297
Sau3AI GATC 9 cut(s) 16, 143, 475, 562, 751, 874, 1033, 1184, 1387
Sau96I GGNCC 4 cut(s) 132, 402, 830, 1022
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 2 cut(s) 1187, 1240
ScrFI CCNGG 3 cut(s) 28, 834, 1392
SfaNI GCATC 1 cut(s) 271
SfcI CTRYAG 3 cut(s) 269, 276, 767
Sfr303I CCGCGG 1 cut(s) 1176
SgrBI CCGCGG 1 cut(s) 1176
SinI GGWCC 2 cut(s) 132, 830
Sse9I AATT 5 cut(s) 138, 623, 926, 939, 1119
SsiI CCGC 5 cut(s) 223, 1114, 1173, 1175, 1271
SspMI CTAG 6 cut(s) 51, 174, 1221, 1266, 1293, 1408
StyD4I CCNGG 3 cut(s) 26, 832, 1390
StyI CCWWGG 3 cut(s) 508, 1025, 1326
TaaI ACNGT 4 cut(s) 859, 986, 1096, 1106
TaiI ACGT 3 cut(s) 261, 347, 1141
TaqI TCGA 5 cut(s) 19, 261, 289, 375, 516
TasI AATT 5 cut(s) 138, 623, 926, 939, 1119
TatI WGTACW 2 cut(s) 489, 692
TauI GCSGC 2 cut(s) 225, 1274
TfiI GAWTC 5 cut(s) 21, 412, 686, 895, 962
Tru1I TTAA 4 cut(s) 645, 726, 861, 1046
Tru9I TTAA 4 cut(s) 645, 726, 861, 1046
TscAI CASTG 4 cut(s) 223, 506, 1111, 1294
TseFI GTSAC 2 cut(s) 583, 1106
TseI GCWGC 5 cut(s) 268, 668, 944, 978, 1296
Tsp45I GTSAC 2 cut(s) 583, 1106
TspDTI ATGAA 2 cut(s) 887, 1329
TspRI CASTG 4 cut(s) 223, 506, 1111, 1294
VpaK11BI GGWCC 2 cut(s) 132, 830
XapI RAATTY 1 cut(s) 623
XceI RCATGY 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 516
XmnI GAANNNNTTC 1 cut(s) 1320
XspI CTAG 6 cut(s) 51, 174, 1221, 1266, 1293, 1408
ZraI GACGTC 1 cut(s) 259
ZrmI AGTACT 1 cut(s) 491
Zsp2I ATGCAT 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.