Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015473

Physical Location & Seq

Genomic Coordinates Reverse (-)

28811685 .. 28813164

Gene Structure 1480 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G76760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 519 bp

ATGGCGTCAATTTCTCTCTCTTCTTCTACGGTTCCGTCGCTGAATTCGAAAGAATCGTCAGGTGTTTCTGCTTTCGCTTCTCGTTCTATCTCGGCCGTCAAATTTCAGTTTCCGGTTCGTCGGGTTCGAACCGGAGACTTAAAGTTTCCATCTTTATCTTCAACGACTCGATGCACTCCTCGACGTATTGAAGCCAAGAAGCAGACATTTGACTCATTTGAGGATCTGCTTGTGAACTCTGATAAACCAGTTCTAGTTGACTATTATGCAACCTGGTGTGGTCCTTGCCAGTTCATGGTTCCAATACTCAATGAAGTGAGTGAAACCCTGAAAGACAAGATACAGGTGGTGAAGATTGATACCGAAAAATACCCCAGTATTGCTAATAAATACAAGATTGAGGCACTTCCTACTTTCATCCTATTCAAAGATGGGGAACCTTGTGATCGCTTTGAGGGTGCTTTGACGGCCAAACAACTCATTCAACGAATTGAGGATTCTCTAAAAGTGAAGCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006979 GO:0008047 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009987 GO:0015035 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019725 GO:0030234 GO:0033554 GO:0034599 GO:0042221 GO:0042592 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044093 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0047134 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0065009 GO:0070887 GO:0097237 GO:0098754 GO:0098772 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thioredoxin

Protein Analysis

172

Amino Acids

19.25

Weight (kDa)

9.03

Isoelectric Point (pI)

53.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thioredoxin	PF00085	67 - 165	8e-30	Thioredoxin
Thioredoxin_2	PF13098	81 - 163	3.4e-08	Thioredoxin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015473)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76760
fragaria_vesca	FvH4_2g13460
malus_domestica	MD05G1027800.v1.1 MD10G1028500.v1.1
prunus_persica	Prupe.8G033500_v2.0.a1
pyrus_communis	pycom10g01850
rosa_chinensis	RchiOBHm_Chr6g0275081
rosa_laevigata	RLG00000013499
rosa_multiflora	Rmu_sc0000447.1_g000014
rosa_roxburghii	Rroxscaffold_7G00193680
rosa_rugosa	Rorug06G0088000
rosa_samantha	Rh6AG202300 Rh6BG205700 Rh6CG207600 Rh6DG197500
rosa_wichuraiana	Rw6G017570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	295
AclWI	GGATC	1 cut(s)	231
AcoI	YGGCCR	2 cut(s)	93, 468
AcsI	RAATTY	2 cut(s)	43, 101
AcyI	GRCGYC	1 cut(s)	5
AfiI	CCNNNNNNNGG	1 cut(s)	295
AgsI	TTSAA	4 cut(s)	162, 191, 427, 485
AjnI	CCWGG	1 cut(s)	272
Alw26I	GTCTC	1 cut(s)	129
AlwI	GGATC	1 cut(s)	231
AoxI	GGCC	2 cut(s)	93, 468
ApoI	RAATTY	2 cut(s)	43, 101
ArsI	GACNNNNNNTTYG	2 cut(s)	41, 73
AspS9I	GGNCC	1 cut(s)	281
AsuHPI	GGTGA	1 cut(s)	361
AsuII	TTCGAA	2 cut(s)	47, 127
AvaII	GGWCC	1 cut(s)	281
BccI	CCATC	2 cut(s)	157, 425
BceAI	ACGGC	2 cut(s)	80, 483
BciT130I	CCWGG	1 cut(s)	274
BcoDI	GTCTC	1 cut(s)	129
BfaI	CTAG	1 cut(s)	254
Bme1390I	CCNGG	1 cut(s)	274
Bme18I	GGWCC	1 cut(s)	281
BmgT120I	GGNCC	1 cut(s)	281
BmiI	GGNNCC	3 cut(s)	33, 300, 438
BmrFI	CCNGG	1 cut(s)	274
BmrI	ACTGGG	1 cut(s)	369
BmsI	GCATC	1 cut(s)	161
BmuI	ACTGGG	1 cut(s)	369
Bpu14I	TTCGAA	2 cut(s)	47, 127
BsaHI	GRCGYC	1 cut(s)	5
BsaWI	WCCGGW	2 cut(s)	112, 131
Bsc4I	CCNNNNNNNGG	1 cut(s)	295
Bse1I	ACTGG	3 cut(s)	248, 289, 375
BseBI	CCWGG	1 cut(s)	274
BseGI	GGATG	1 cut(s)	417
BseLI	CCNNNNNNNGG	1 cut(s)	295
BseNI	ACTGG	3 cut(s)	248, 289, 375
BseRI	GAGGAG	1 cut(s)	168
BseX3I	CGGCCG	1 cut(s)	93
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	2 cut(s)	95, 470
BsiEI	CGRYCG	1 cut(s)	96
BsiSI	CCGG	2 cut(s)	113, 132
BslI	CCNNNNNNNGG	1 cut(s)	295
BsmAI	GTCTC	1 cut(s)	129
BsnI	GGCC	2 cut(s)	95, 470
Bsp119I	TTCGAA	2 cut(s)	47, 127
Bsp143I	GATC	2 cut(s)	223, 445
BspANI	GGCC	2 cut(s)	95, 470
BspLI	GGNNCC	3 cut(s)	33, 300, 438
BspPI	GGATC	1 cut(s)	231
BspT104I	TTCGAA	2 cut(s)	47, 127
BsrI	ACTGG	3 cut(s)	248, 289, 375
BssMI	GATC	2 cut(s)	223, 445
BssNI	GRCGYC	1 cut(s)	5
Bst2UI	CCWGG	1 cut(s)	274
Bst4CI	ACNGT	1 cut(s)	31
Bst6I	CTCTTC	1 cut(s)	25
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	2 cut(s)	47, 127
BstF5I	GGATG	1 cut(s)	417
BstKTI	GATC	2 cut(s)	226, 448
BstMAI	GTCTC	1 cut(s)	129
BstMBI	GATC	2 cut(s)	223, 445
BstMCI	CGRYCG	1 cut(s)	96
BstMWI	GCNNNNNNNGC	1 cut(s)	467
BstNI	CCWGG	1 cut(s)	274
BstSCI	CCNGG	1 cut(s)	272
BstX2I	RGATCY	1 cut(s)	223
BstYI	RGATCY	1 cut(s)	223
BstZI	CGGCCG	1 cut(s)	93
BsuRI	GGCC	2 cut(s)	95, 470
BtsCI	GGATG	1 cut(s)	417
Cfr13I	GGNCC	1 cut(s)	281
CsiI	ACCWGGT	1 cut(s)	272
CviAII	CATG	1 cut(s)	295
CviJI	RGCY	4 cut(s)	95, 194, 470, 514
CviKI_1	RGCY	4 cut(s)	95, 194, 470, 514
DpnI	GATC	2 cut(s)	225, 447
DpnII	GATC	2 cut(s)	223, 445
EaeI	YGGCCR	2 cut(s)	93, 468
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	1 cut(s)	25
EarI	CTCTTC	1 cut(s)	25
EclXI	CGGCCG	1 cut(s)	93
Eco47I	GGWCC	1 cut(s)	281
Eco52I	CGGCCG	1 cut(s)	93
EcoRI	GAATTC	1 cut(s)	43
EcoRII	CCWGG	1 cut(s)	272
FaeI	CATG	1 cut(s)	298
FaiI	YATR	3 cut(s)	267, 296, 517
FatI	CATG	1 cut(s)	294
FokI	GGATG	1 cut(s)	404
FspBI	CTAG	1 cut(s)	254
HaeIII	GGCC	2 cut(s)	95, 470
HapII	CCGG	2 cut(s)	113, 132
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	1 cut(s)	298
HincII	GTYRAC	1 cut(s)	259
HindII	GTYRAC	1 cut(s)	259
HinfI	GANTC	4 cut(s)	53, 166, 212, 497
HpaII	CCGG	2 cut(s)	113, 132
HphI	GGTGA	1 cut(s)	361
Hpy166II	GTNNAC	2 cut(s)	235, 259
Hpy188I	TCNGA	1 cut(s)	241
Hpy8I	GTNNAC	2 cut(s)	235, 259
Hpy99I	CGWCG	3 cut(s)	40, 123, 186
HpyCH4III	ACNGT	1 cut(s)	31
HpyCH4IV	ACGT	1 cut(s)	184
HpyCH4V	TGCA	2 cut(s)	174, 269
HpyF10VI	GCNNNNNNNGC	1 cut(s)	467
HpySE526I	ACGT	1 cut(s)	184
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	1 cut(s)	298
Kzo9I	GATC	2 cut(s)	223, 445
LweI	GCATC	1 cut(s)	161
MabI	ACCWGGT	1 cut(s)	272
MaeI	CTAG	1 cut(s)	254
MaeII	ACGT	1 cut(s)	184
MalI	GATC	2 cut(s)	225, 447
MboI	GATC	2 cut(s)	223, 445
MboII	GAAGA	4 cut(s)	12, 15, 150, 364
MflI	RGATCY	1 cut(s)	223
MluCI	AATT	4 cut(s)	9, 43, 101, 489
MlyI	GAGTC	2 cut(s)	160, 206
MnlI	CCTC	5 cut(s)	189, 214, 394, 448, 487
MseI	TTAA	1 cut(s)	140
MspI	CCGG	2 cut(s)	113, 132
MspR9I	CCNGG	1 cut(s)	274
MvaI	CCWGG	1 cut(s)	274
MwoI	GCNNNNNNNGC	1 cut(s)	467
NdeII	GATC	2 cut(s)	223, 445
NlaIII	CATG	1 cut(s)	298
NlaIV	GGNNCC	3 cut(s)	33, 300, 438
NmeAIII	GCCGAG	1 cut(s)	71
NspV	TTCGAA	2 cut(s)	47, 127
PcsI	WCGNNNNNNNCGW	3 cut(s)	44, 53, 124
PfeI	GAWTC	2 cut(s)	53, 497
PflMI	CCANNNNNTGG	1 cut(s)	295
PleI	GAGTC	2 cut(s)	160, 206
PpsI	GAGTC	2 cut(s)	160, 206
Psp6I	CCWGG	1 cut(s)	272
PspGI	CCWGG	1 cut(s)	272
PspN4I	GGNNCC	3 cut(s)	33, 300, 438
PspPI	GGNCC	1 cut(s)	281
PsuI	RGATCY	1 cut(s)	223
SaqAI	TTAA	1 cut(s)	140
Sau3AI	GATC	2 cut(s)	223, 445
Sau96I	GGNCC	1 cut(s)	281
SchI	GAGTC	2 cut(s)	160, 206
ScrFI	CCNGG	1 cut(s)	274
SetI	ASST	5 cut(s)	64, 187, 275, 348, 442
SexAI	ACCWGGT	1 cut(s)	272
SfaNI	GCATC	1 cut(s)	161
SfuI	TTCGAA	2 cut(s)	47, 127
SinI	GGWCC	1 cut(s)	281
Sse9I	AATT	4 cut(s)	9, 43, 101, 489
SspMI	CTAG	1 cut(s)	254
StyD4I	CCNGG	1 cut(s)	272
TaaI	ACNGT	1 cut(s)	31
TaiI	ACGT	1 cut(s)	187
TaqI	TCGA	4 cut(s)	47, 127, 169, 181
TasI	AATT	4 cut(s)	9, 43, 101, 489
TfiI	GAWTC	2 cut(s)	53, 497
Tru1I	TTAA	1 cut(s)	140
Tru9I	TTAA	1 cut(s)	140
TspDTI	ATGAA	3 cut(s)	283, 327, 406
TspGWI	ACGGA	1 cut(s)	24
Van91I	CCANNNNNTGG	1 cut(s)	295
VpaK11BI	GGWCC	1 cut(s)	281
XapI	RAATTY	2 cut(s)	43, 101
XspI	CTAG	1 cut(s)	254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.