Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013873

Physical Location & Seq

Genomic Coordinates Reverse (-)

29490705 .. 29492875

Gene Structure 2171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G78390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGACGATAATAACCATTATTTCTGGTATGTATATATATAGCCTTCTGTCCCAAGATGCTCATCACTCACAATATGGACAAAACACAAACTTGGTCTTGAAGAAACCAATACCAAAACCCCAAACCGCAGCGTTTAATCAAGAATCGACTATGGCTTCTACTACCTTACTTCCTTCTACTTCAACCCAATTCCTCGACCGAACTTTCTCAACTTCATCTTCCTCTTCGAGACCTAAACTTCAATCTCTATCTTTTTCCTCAACACTTAGAAACAAGAAACTAGTAGTCCCCTGCTATGTTTCTTCCTCCGTCAACAAAAAATCTTCCGTCTCGTCTTCTCTCCAATCTCCGACATTCAAACCACCGTCTTGGAAGAAACTATGTAACGATGTCACCAACTTGATCCCCAAAACGACGAATCAGAATCCAAAATTAAACCCGGTGCAGAGAACCGCCGCTATGGTTTTAGACGCGGTGGAAAACGCCATGATCTCACACGAGCGCCGCCGTCATCCCCATCCTAAAACGGCGGATCCTGCCGTCCAAATAGCCGGGAACTTCTTCCCGGTACCGGAGAAACCTGTCGTGCATAACCTTCCGGTGACTGGAACAGTACCAGAATGCATTCAAGGAGTTTACGTCAGAAACGGAGCAAATCCACTTCACAAACCAGTCTCCGGCCACCATTTGTTCGACGGAGACGGTATGGTACACGCTGTCCGGTTCGATAACGGCTCGGTTAGCTACGCTTGTCGGTTTACCGAAACAAACCGGTTGGTTCAAGAACGTGAATGTGGTCGTCCGGTTTTCCCCAAAGCAATTGGAGAGCTTCACGGACATTTAGGAATCGCCAAGCTTATGCTCTTCAATACCCGCGGGCTATTTGGGTTAGTCGACCCGACCGGAGGACTCGGTGTCGCTAACGCCGGTTTAGTTTATTTCAATGGTCATCTCTTAGCCATGTCCGAAGACGATTTACCGTACCATGTCAAAGTTACTCAAACCGGAGATTTAGAAACTTCGGGTCGGTACGATTTCGACGGTCAGTTAAAATCAACAATGATAGCCCACCCGAAAATCGATCCCGAAACCCGAGAACTCTTCGCTTTAAGCTACGACGTCGTTTCAAAGCCTTACTTAAAATACTTCAGATTCACATCCGACGGTGAGAAATCACCAGACGTCGAGATTCCGCTTGATCAACCAACGATGATCCACGATTTCGCGATCACTGAGAATTTCGTAGTGATTCCAGACCAACAAGTGGTATTCCGATTGCCGGAGATGATAAGAGGTGGTTCTCCGGTGGTTTACGACGAGAAGAAGAAATCAAGATTCGGGATTTTGAATAAAAACGCGAAAGATGCTTCGTCGATTCAATGGATCGAAGTACCAGATTGTTTTTGTTTCCATCTATGGAACTCTTGGGAAGAACCAGAAACAGACGAGGTTGTCGTGATTGGATCATGCATGACGCCACCTGATTCAATTTTCAACGAACACGACGAAACACTTCAGAGTGTTTTGTCGGAGATAAGGCTAAACCTTAAAACAGGGGAATCAACACGTAGACCGGTTATCTCGGAACAAGTTAATCTCGAAGCTGGTATGGTCAACCGGAATTTATTAGGTAGAAAAACCCGGTATGCTTATCTGGCTTTAACCGAACCGTGGCCTAAAGTGTCCGGTTTCGCTAAAGTGGACTTATCGACCGGAGAGATTCGAAAGTATATTTACGGAGAGGGGAAATACGGAGGAGAGCCTCTGTTTCTACCTTCCGGTGACGGAGAAGAAGACGGAGGTTACATAATGGTGTTCGTTCACGACGAGGAGAAGGTGAAATCGGAACTCCAACTCATAAACGCCGTTAATATGAAGCTTGAAGCTACCGTAACGCTTCCGTCGAGAGTGCCTTACGGTTTCCACGGAACGTTCATCAGTAAGGAAGATTTATCGAAGCAAGCTTTGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042538 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

657

Amino Acids

73.01

Weight (kDa)

6.59

Isoelectric Point (pI)

42.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	187 - 647	3.5e-131	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0013873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78390
fragaria_vesca	FvH4_3g16730
malus_domestica	MD05G1207300.v1.1 MD10G1194200.v1.1
prunus_persica	Prupe.4G150100_v2.0.a1
pyrus_communis	pycom05g19340 pycom10g16810
rosa_chinensis	RchiOBHm_Chr5g0027901
rosa_laevigata	RLG00000033052
rosa_multiflora	Rmu_sc0000309.1_g000029
rosa_roxburghii	Rroxscaffold_1G00051730
rosa_rugosa	Rorug05G0102400.1
rosa_samantha	Rh5AG196700 Rh5BG194600 Rh5CG214600 Rh5DG196300
rosa_wichuraiana	Rw5G017900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1451
AatII	GACGTC	2 cut(s)	1122, 1185
Acc65I	GGTACC	1 cut(s)	568
AccB1I	GGYRCC	1 cut(s)	568
AccB7I	CCANNNNNTGG	1 cut(s)	1264
AccI	GTMKAC	2 cut(s)	894, 1570
AccII	CGCG	4 cut(s)	473, 876, 1226, 1358
AciI	CCGC	9 cut(s)	126, 453, 456, 473, 505, 530, 874, 876, 1193
AclI	AACGTT	1 cut(s)	1931
AclWI	GGATC	7 cut(s)	397, 527, 540, 1076, 1207, 1391, 1471
AcoI	YGGCCR	1 cut(s)	679
AcsI	RAATTY	2 cut(s)	1237, 1621
AcuI	CTGAAG	2 cut(s)	1132, 1499
AcyI	GRCGYC	3 cut(s)	1119, 1182, 1475
AfaI	GTAC	6 cut(s)	570, 615, 711, 983, 1031, 1392
AfiI	CCNNNNNNNGG	7 cut(s)	571, 605, 677, 905, 1264, 1279, 1671
AflIII	ACRYGT	1 cut(s)	1565
AgeI	ACCGGT	2 cut(s)	771, 1573
AhdI	GACNNNNNGTC	1 cut(s)	914
AhlI	ACTAGT	1 cut(s)	280
AluBI	AGCT	8 cut(s)	744, 829, 856, 1113, 1604, 1879, 1886, 1964
AluI	AGCT	8 cut(s)	744, 829, 856, 1113, 1604, 1879, 1886, 1964
Alw26I	GTCTC	4 cut(s)	223, 334, 679, 693
AlwI	GGATC	7 cut(s)	397, 527, 540, 1076, 1207, 1391, 1471
Ama87I	CYCGRG	1 cut(s)	1092
AoxI	GGCC	2 cut(s)	679, 1673
ApeKI	GCWGC	1 cut(s)	128
ApoI	RAATTY	2 cut(s)	1237, 1621
AsiGI	ACCGGT	2 cut(s)	771, 1573
Asp700I	GAANNNNTTC	3 cut(s)	560, 624, 1512
Asp718I	GGTACC	1 cut(s)	568
AspLEI	GCGC	1 cut(s)	504
AsuC2I	CCSGG	4 cut(s)	440, 553, 566, 1642
AsuHPI	GGTGA	6 cut(s)	385, 613, 1167, 1178, 1793, 1849
AsuII	TTCGAA	1 cut(s)	1723
AvaI	CYCGRG	1 cut(s)	1092
BamHI	GGATCC	1 cut(s)	532
BanI	GGYRCC	1 cut(s)	568
BarI	GAAGNNNNNNTAC	2 cut(s)	960, 992
BauI	CACGAG	1 cut(s)	497
BbsI	GAAGAC	3 cut(s)	327, 975, 1800
BbvI	GCAGC	1 cut(s)	140
BccI	CCATC	2 cut(s)	525, 1419
BceAI	ACGGC	5 cut(s)	492, 524, 543, 748, 1850
BclI	TGATCA	1 cut(s)	1198
BcnI	CCSGG	4 cut(s)	440, 553, 566, 1642
BcoDI	GTCTC	4 cut(s)	223, 334, 679, 693
BcuI	ACTAGT	1 cut(s)	280
BfaI	CTAG	1 cut(s)	281
BfoI	RGCGCY	1 cut(s)	505
BisI	GCNGC	3 cut(s)	129, 456, 505
BlsI	GCNGC	3 cut(s)	130, 457, 506
Bme1390I	CCNGG	4 cut(s)	440, 553, 566, 1642
BmeRI	GACNNNNNGTC	1 cut(s)	914
BmeT110I	CYCGRG	1 cut(s)	1092
BmiI	GGNNCC	2 cut(s)	534, 570
BmrFI	CCNGG	4 cut(s)	440, 553, 566, 1642
BmsI	GCATC	2 cut(s)	46, 1354
BpiI	GAAGAC	3 cut(s)	327, 975, 1800
Bpu14I	TTCGAA	1 cut(s)	1723
BpuMI	CCSGG	4 cut(s)	440, 553, 566, 1642
Bsa29I	ATCGAT	1 cut(s)	1080
BsaAI	YACGTR	1 cut(s)	1568
BsaBI	GATNNNNATC	2 cut(s)	60, 1156
BsaHI	GRCGYC	3 cut(s)	1119, 1182, 1475
BsaI	GGTCTC	1 cut(s)	223
BsaJI	CCNNGG	3 cut(s)	874, 1670, 1924
BsaXI	ACNNNNNCTCC	2 cut(s)	624, 654
Bsc4I	CCNNNNNNNGG	7 cut(s)	571, 605, 677, 905, 1264, 1279, 1671
Bse118I	RCCGGY	3 cut(s)	771, 926, 1573
Bse1I	ACTGG	2 cut(s)	610, 671
Bse8I	GATNNNNATC	2 cut(s)	60, 1156
BseCI	ATCGAT	1 cut(s)	1080
BseDI	CCNNGG	3 cut(s)	874, 1670, 1924
BseGI	GGATG	3 cut(s)	511, 517, 1157
BseJI	GATNNNNATC	2 cut(s)	60, 1156
BseLI	CCNNNNNNNGG	7 cut(s)	571, 605, 677, 905, 1264, 1279, 1671
BseMII	CTCAG	1 cut(s)	1224
BseNI	ACTGG	2 cut(s)	610, 671
BseRI	GAGGAG	2 cut(s)	1770, 1844
BseXI	GCAGC	1 cut(s)	140
BsgI	GTGCAG	1 cut(s)	464
Bsh1236I	CGCG	4 cut(s)	473, 876, 1226, 1358
Bsh1285I	CGRYCG	3 cut(s)	199, 903, 1713
BshFI	GGCC	2 cut(s)	681, 1675
BshNI	GGYRCC	1 cut(s)	568
BshTI	ACCGGT	2 cut(s)	771, 1573
BshVI	ATCGAT	1 cut(s)	1080
BsiEI	CGRYCG	3 cut(s)	199, 903, 1713
BsiHKCI	CYCGRG	1 cut(s)	1092
BslFI	GGGAC	2 cut(s)	34, 272
BslI	CCNNNNNNNGG	7 cut(s)	571, 605, 677, 905, 1264, 1279, 1671
BsmAI	GTCTC	4 cut(s)	223, 334, 679, 693
BsmBI	CGTCTC	2 cut(s)	334, 693
BsmFI	GGGAC	2 cut(s)	34, 272
BsmI	GAATGC	2 cut(s)	624, 626
BsnI	GGCC	2 cut(s)	681, 1675
Bso31I	GGTCTC	1 cut(s)	223
BsoBI	CYCGRG	1 cut(s)	1092
Bsp119I	TTCGAA	1 cut(s)	1723
Bsp143I	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
Bsp68I	TCGCGA	1 cut(s)	1226
BspACI	CCGC	9 cut(s)	126, 453, 456, 473, 505, 530, 874, 876, 1193
BspANI	GGCC	2 cut(s)	681, 1675
BspCNI	CTCAG	1 cut(s)	1225
BspDI	ATCGAT	1 cut(s)	1080
BspFNI	CGCG	4 cut(s)	473, 876, 1226, 1358
BspLI	GGNNCC	2 cut(s)	534, 570
BspPI	GGATC	7 cut(s)	397, 527, 540, 1076, 1207, 1391, 1471
BspQI	GCTCTTC	1 cut(s)	869
BspT104I	TTCGAA	1 cut(s)	1723
BspT107I	GGYRCC	1 cut(s)	568
BspTNI	GGTCTC	1 cut(s)	223
BsrFI	RCCGGY	3 cut(s)	771, 926, 1573
BsrI	ACTGG	2 cut(s)	610, 671
BssAI	RCCGGY	3 cut(s)	771, 926, 1573
BssECI	CCNNGG	3 cut(s)	874, 1670, 1924
BssMI	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
BssNI	GRCGYC	3 cut(s)	1119, 1182, 1475
BssSI	CACGAG	1 cut(s)	497
Bst2BI	CACGAG	1 cut(s)	497
Bst4CI	ACNGT	9 cut(s)	366, 613, 704, 981, 1043, 1166, 1671, 1891, 1919
Bst6I	CTCTTC	3 cut(s)	229, 869, 1106
BstACI	GRCGYC	3 cut(s)	1119, 1182, 1475
BstBAI	YACGTR	1 cut(s)	1568
BstBI	TTCGAA	1 cut(s)	1723
BstC8I	GCNNGC	2 cut(s)	878, 1962
BstDEI	CTNAG	3 cut(s)	266, 955, 1233
BstDSI	CCRYGG	3 cut(s)	874, 1670, 1924
BstF5I	GGATG	3 cut(s)	511, 517, 1157
BstFNI	CGCG	4 cut(s)	473, 876, 1226, 1358
BstH2I	RGCGCY	1 cut(s)	505
BstHHI	GCGC	1 cut(s)	504
BstKTI	GATC	9 cut(s)	405, 492, 535, 1084, 1201, 1215, 1230, 1386, 1466
BstMAI	GTCTC	4 cut(s)	223, 334, 679, 693
BstMBI	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
BstMCI	CGRYCG	3 cut(s)	199, 903, 1713
BstMWI	GCNNNNNNNGC	4 cut(s)	536, 741, 1364, 1655
BstSCI	CCNGG	4 cut(s)	438, 551, 564, 1640
BstUI	CGCG	4 cut(s)	473, 876, 1226, 1358
BstV1I	GCAGC	1 cut(s)	140
BstV2I	GAAGAC	3 cut(s)	327, 975, 1800
BstX2I	RGATCY	1 cut(s)	532
BstXI	CCANNNNNNTGG	1 cut(s)	369
BstYI	RGATCY	1 cut(s)	532
Bsu15I	ATCGAT	1 cut(s)	1080
BsuRI	GGCC	2 cut(s)	681, 1675
BsuTUI	ATCGAT	1 cut(s)	1080
BtgI	CCRYGG	3 cut(s)	874, 1670, 1924
BtsCI	GGATG	3 cut(s)	511, 517, 1157
BtsIMutI	CAGTG	1 cut(s)	1230
BtuMI	TCGCGA	1 cut(s)	1226
Cac8I	GCNNGC	2 cut(s)	878, 1962
CfoI	GCGC	1 cut(s)	504
Cfr10I	RCCGGY	3 cut(s)	771, 926, 1573
Cfr42I	CCGCGG	1 cut(s)	877
ClaI	ATCGAT	1 cut(s)	1080
CseI	GACGC	2 cut(s)	479, 1483
Csp6I	GTAC	6 cut(s)	569, 614, 710, 982, 1030, 1391
CspAI	ACCGGT	2 cut(s)	771, 1573
CviAII	CATG	5 cut(s)	487, 961, 986, 1467, 1471
CviQI	GTAC	6 cut(s)	569, 614, 710, 982, 1030, 1391
DdeI	CTNAG	3 cut(s)	266, 955, 1233
DpnI	GATC	9 cut(s)	404, 491, 534, 1083, 1200, 1214, 1229, 1385, 1465
DpnII	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
DrdI	GACNNNNNNGTC	1 cut(s)	1451
DriI	GACNNNNNGTC	1 cut(s)	914
DseDI	GACNNNNNNGTC	1 cut(s)	1451
EaeI	YGGCCR	1 cut(s)	679
Eam1104I	CTCTTC	3 cut(s)	229, 869, 1106
Eam1105I	GACNNNNNGTC	1 cut(s)	914
EarI	CTCTTC	3 cut(s)	229, 869, 1106
EciI	GGCGGA	1 cut(s)	545
Eco31I	GGTCTC	1 cut(s)	223
Eco57I	CTGAAG	2 cut(s)	1132, 1499
Eco88I	CYCGRG	1 cut(s)	1092
EcoT22I	ATGCAT	2 cut(s)	626, 1472
Esp3I	CGTCTC	2 cut(s)	334, 693
FaeI	CATG	5 cut(s)	490, 964, 989, 1470, 1474
FalI	AAGNNNNNCTT	2 cut(s)	1121, 1153
FaqI	GGGAC	2 cut(s)	34, 272
FatI	CATG	5 cut(s)	486, 960, 985, 1466, 1470
FauI	CCCGC	2 cut(s)	869, 881
FbaI	TGATCA	1 cut(s)	1198
FblI	GTMKAC	2 cut(s)	894, 1570
Fnu4HI	GCNGC	3 cut(s)	129, 456, 505
FokI	GGATG	3 cut(s)	498, 504, 1144
Fsp4HI	GCNGC	3 cut(s)	129, 456, 505
FspBI	CTAG	1 cut(s)	281
GlaI	GCGC	1 cut(s)	503
GluI	GCNGC	3 cut(s)	129, 456, 505
HaeII	RGCGCY	1 cut(s)	505
HaeIII	GGCC	2 cut(s)	681, 1675
HgaI	GACGC	2 cut(s)	479, 1483
HhaI	GCGC	1 cut(s)	504
Hin1I	GRCGYC	3 cut(s)	1119, 1182, 1475
Hin1II	CATG	5 cut(s)	490, 964, 989, 1470, 1474
Hin6I	GCGC	1 cut(s)	502
HinP1I	GCGC	1 cut(s)	502
HincII	GTYRAC	3 cut(s)	313, 895, 1615
HindII	GTYRAC	3 cut(s)	313, 895, 1615
HindIII	AAGCTT	3 cut(s)	854, 1877, 1962
HphI	GGTGA	6 cut(s)	385, 613, 1167, 1178, 1793, 1849
HpyAV	CCTTC	5 cut(s)	53, 183, 605, 1785, 1828
HpyCH4III	ACNGT	9 cut(s)	366, 613, 704, 981, 1043, 1166, 1671, 1891, 1919
HpyCH4IV	ACGT	6 cut(s)	639, 787, 1119, 1182, 1567, 1931
HpyCH4V	TGCA	4 cut(s)	445, 589, 624, 1470
HpyF10VI	GCNNNNNNNGC	4 cut(s)	536, 741, 1364, 1655
HpyF3I	CTNAG	3 cut(s)	266, 955, 1233
HpySE526I	ACGT	6 cut(s)	639, 787, 1119, 1182, 1567, 1931
Hsp92I	GRCGYC	3 cut(s)	1119, 1182, 1475
Hsp92II	CATG	5 cut(s)	490, 964, 989, 1470, 1474
HspAI	GCGC	1 cut(s)	502
KpnI	GGTACC	1 cut(s)	572
Ksp22I	TGATCA	1 cut(s)	1198
KspI	CCGCGG	1 cut(s)	877
Kzo9I	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
LguI	GCTCTTC	1 cut(s)	869
LmnI	GCTCC	1 cut(s)	650
Lsp1109I	GCAGC	1 cut(s)	140
LweI	GCATC	2 cut(s)	46, 1354
MaeI	CTAG	1 cut(s)	281
MaeII	ACGT	6 cut(s)	639, 787, 1119, 1182, 1567, 1931
MaeIII	GTNAC	7 cut(s)	383, 391, 601, 994, 1781, 1802, 1891
MalI	GATC	9 cut(s)	404, 491, 534, 1083, 1200, 1214, 1229, 1385, 1465
MboI	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
MfeI	CAATTG	1 cut(s)	819
MflI	RGATCY	1 cut(s)	532
MluCI	AATT	6 cut(s)	188, 431, 819, 1237, 1488, 1621
MlyI	GAGTC	1 cut(s)	903
MmeI	TCCRAC	4 cut(s)	374, 1185, 1509, 1876
Mph1103I	ATGCAT	2 cut(s)	626, 1472
MroXI	GAANNNNTTC	3 cut(s)	560, 624, 1512
MseI	TTAA	9 cut(s)	135, 434, 1049, 1109, 1139, 1548, 1593, 1661, 1869
MslI	CAYNNNNRTG	1 cut(s)	1811
MspA1I	CMGCKG	1 cut(s)	876
MspR9I	CCNGG	4 cut(s)	440, 553, 566, 1642
MunI	CAATTG	1 cut(s)	819
Mva1269I	GAATGC	2 cut(s)	624, 626
MvnI	CGCG	4 cut(s)	473, 876, 1226, 1358
MwoI	GCNNNNNNNGC	4 cut(s)	536, 741, 1364, 1655
NciI	CCSGG	4 cut(s)	440, 553, 566, 1642
NdeII	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
NlaIII	CATG	5 cut(s)	490, 964, 989, 1470, 1474
NlaIV	GGNNCC	2 cut(s)	534, 570
NmuCI	GTSAC	3 cut(s)	391, 601, 1781
NruI	TCGCGA	1 cut(s)	1226
NsiI	ATGCAT	2 cut(s)	626, 1472
NspV	TTCGAA	1 cut(s)	1723
PciSI	GCTCTTC	1 cut(s)	869
PcsI	WCGNNNNNNNCGW	4 cut(s)	1452, 1503, 1824, 1901
PctI	GAATGC	2 cut(s)	624, 626
PdmI	GAANNNNTTC	3 cut(s)	560, 624, 1512
PflMI	CCANNNNNTGG	1 cut(s)	1264
PinAI	ACCGGT	2 cut(s)	771, 1573
PkrI	GCNGC	3 cut(s)	130, 457, 506
PleI	GAGTC	1 cut(s)	903
PpsI	GAGTC	1 cut(s)	903
Ppu21I	YACGTR	1 cut(s)	1568
Psp1406I	AACGTT	1 cut(s)	1931
PspN4I	GGNNCC	2 cut(s)	534, 570
PsuI	RGATCY	1 cut(s)	532
RruI	TCGCGA	1 cut(s)	1226
RsaI	GTAC	6 cut(s)	570, 615, 711, 983, 1031, 1392
RsaNI	GTAC	6 cut(s)	569, 614, 710, 982, 1030, 1391
RseI	CAYNNNNRTG	1 cut(s)	1811
SacII	CCGCGG	1 cut(s)	877
SalI	GTCGAC	1 cut(s)	893
SapI	GCTCTTC	1 cut(s)	869
SaqAI	TTAA	9 cut(s)	135, 434, 1049, 1109, 1139, 1548, 1593, 1661, 1869
SatI	GCNGC	3 cut(s)	129, 456, 505
Sau3AI	GATC	9 cut(s)	402, 489, 532, 1081, 1198, 1212, 1227, 1383, 1463
SchI	GAGTC	1 cut(s)	903
ScrFI	CCNGG	4 cut(s)	440, 553, 566, 1642
SfaNI	GCATC	2 cut(s)	46, 1354
Sfr303I	CCGCGG	1 cut(s)	877
SfuI	TTCGAA	1 cut(s)	1723
SgrBI	CCGCGG	1 cut(s)	877
SmiMI	CAYNNNNRTG	1 cut(s)	1811
SpeI	ACTAGT	1 cut(s)	280
Sse9I	AATT	6 cut(s)	188, 431, 819, 1237, 1488, 1621
SsiI	CCGC	9 cut(s)	126, 453, 456, 473, 505, 530, 874, 876, 1193
SspMI	CTAG	1 cut(s)	281
StyD4I	CCNGG	4 cut(s)	438, 551, 564, 1640
TaaI	ACNGT	9 cut(s)	366, 613, 704, 981, 1043, 1166, 1671, 1891, 1919
TaiI	ACGT	6 cut(s)	642, 790, 1122, 1185, 1570, 1934
TaqII	GACCGA	1 cut(s)	213
TasI	AATT	6 cut(s)	188, 431, 819, 1237, 1488, 1621
TauI	GCSGC	2 cut(s)	458, 507
Tru1I	TTAA	9 cut(s)	135, 434, 1049, 1109, 1139, 1548, 1593, 1661, 1869
Tru9I	TTAA	9 cut(s)	135, 434, 1049, 1109, 1139, 1548, 1593, 1661, 1869
TscAI	CASTG	1 cut(s)	1237
TseFI	GTSAC	3 cut(s)	391, 601, 1781
TseI	GCWGC	1 cut(s)	128
Tsp45I	GTSAC	3 cut(s)	391, 601, 1781
TspDTI	ATGAA	3 cut(s)	204, 1889, 1924
TspRI	CASTG	1 cut(s)	1237
Van91I	CCANNNNNTGG	1 cut(s)	1264
XapI	RAATTY	2 cut(s)	1237, 1621
XmiI	GTMKAC	2 cut(s)	894, 1570
XmnI	GAANNNNTTC	3 cut(s)	560, 624, 1512
XspI	CTAG	1 cut(s)	281
ZraI	GACGTC	2 cut(s)	1120, 1183
Zsp2I	ATGCAT	2 cut(s)	626, 1472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.