Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0013873

Physical Location & Seq

Genomic Coordinates Reverse (-)

22245217 .. 22247058

Gene Structure 1842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g19340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGCCTTCCACTGCAGCAGCAGCCACCGGCACATGGGTTAAGCCTGTTACTACTACCACTACAAGACACCGCCACCTTTCTTCTTTAAACTCTTCAAATCCTCTCAGAAAACAATTGAGATTTTCTCCCTCTTCTTCCTCAATTTTCAAATCAAACACTCTAAATTGCTCTCTGCAAACCCCTTCTCTAATCCAAATCCCCAAACGCTCCCCTTCCTATCAACAACCTTCAACTCCCACTAAAATCCCAAGAGAAAATAAGACCCAAAAGTCCAGAACTTCTTCAAAGCCAGTGCCGCAACAATGGAACTTGTTACAGAGAGCAGCATCCATGGCTTTGGACGTAATGGAGAGCGCTCTGCTTTCGAAAGAAAAACAAACCCCACTTCCCAAAACATCCGACCCAAAAGTACAGATTGCCGGAAACTTCGCTCCAGTACCGGAGCACCCCGTCGAACACTCTCTACCGGTGACCGGAAAGATTCCAGACTCAATCCAAGGCGTCTACGTCCGAAACGGCGCCAACCCACTTCACGAGCCGGTGGCCGGTCACCACCTCTTCGACGGCGACGGCATGGTCCACGCCCTCCAGTTCAAAGACGGAACCGCCAGCTACGCCTGCAGGTTCACCGAAACGCACCGTATGAGCCAAGAACGCGACCTTGGCCGTCCCCTGTTTCCCAAAGCCATTGGCGAGCTCCACGGCCACTCTGGCATCGCCCGCCTCCTCCTTTTCTACGCCCGCGGGATGTTCGGACTCGTGGACCCAAGCCACGGAATCGGCGTCGCCAACGCCGGCCTCGTCTACCACAACGGCCACCTTCTCGCCATGTCCGAAGACGACTTACCGTATCACGTCCAAATCACTGAAACAGGGGACCTCAAAACGGTCGGCCGTTACGACTTCGAAGGGCAGCTGAAGTCCACAATGATCGCCCACCCGAAGGTGGACCCCGCCACGGGCGAACTCTTCGCGCTTAGCTACGACGTCGTTCAGAAGCCATACCTCAAATACTTCAAATTCTCCCCAAGCGGCGACAAATCCCCGGACGTCGAAATCAACCTCGAGCAACCCACCATGATGCACGACTTCGCCATTACCGAACGACACGTCGTAATCCCAGACCAGCAGGTGGTGTTCAAGCTGCAGGAGATGATCGGCGGTGGGTCCCCCGTAATTTACGACAAGAACAAGATGTCGCGTTTCGGGATCCTCGACAAGAATGCCAAGGACGCGTCGGGAATCCGGTGGGTAGACTGCCCCGACTGCTTCTGCTTCCACCTCTGGAACGCGTGGGAGGAGCCGGAGACCGACGAGATCGTCGTAATCGGCTCCTGCATGACACCGCCGGACTCCATTTTCAACGAATGCGACGAGAATTTAGAAAGCGTCTTGTCCGAAATCCGGCTTAATTTGAAAACCGGGAAGTCAACGCGCCGCTGCATTTGCGCAGAGAATCTGAACCTGGAAGCTGGGATGGTGAACCGGAACAAGCTAGGGAGAAAAACCCGGTTCGCTTATTTGGCTCTGGCGGAGCCGTGGCCCAAAGTTTCGGGCTTTGCCAAGGTGGACCTCTCCACCGGCGAGGTGAAGAAGCATATCTATGGCGAGGAGAAGTACGGCGGGGAGCCTATGTTTCTTCCCAGAGACCCCAACTGGGAGAATGAGGACGATGGATACATTTTGGCCTTCGTTCACGACGAGAAGGAGTGGAAGTCGGAGCTGCAAATCGTGAACGCCATGGATTTGAAGGTGGAAGCTACAATTCAGCTGCCCTCGAGAGTTCCGTACGGTTTTCATGGTACGTTTATAAGTGCCAAGGACTTGGAGAAGCAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042538 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

614

Amino Acids

68.32

Weight (kDa)

6.63

Isoelectric Point (pI)

45.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	143 - 605	1.2e-131	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78390
fragaria_vesca	FvH4_3g16730
malus_domestica	MD05G1207300.v1.1 MD10G1194200.v1.1
prunus_persica	Prupe.4G150100_v2.0.a1
pyrus_communis	pycom05g19340 pycom10g16810
rosa_chinensis	RchiOBHm_Chr5g0027901
rosa_laevigata	RLG00000033052
rosa_multiflora	Rmu_sc0000309.1_g000029
rosa_roxburghii	Rroxscaffold_1G00051730
rosa_rugosa	Rorug05G0102400.1
rosa_samantha	Rh5AG196700 Rh5BG194600 Rh5CG214600 Rh5DG196300
rosa_wichuraiana	Rw5G017900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1811
AarI	CACCTGC	1 cut(s)	1120
AasI	GACNNNNNNGTC	3 cut(s)	268, 575, 1319
AatII	GACGTC	2 cut(s)	990, 1053
Acc16I	TGCGCA	1 cut(s)	1450
Acc36I	ACCTGC	2 cut(s)	612, 1120
AccB1I	GGYRCC	1 cut(s)	518
AccB7I	CCANNNNNTGG	1 cut(s)	1132
AccI	GTMKAC	3 cut(s)	504, 804, 1254
AccII	CGCG	7 cut(s)	657, 744, 974, 1201, 1235, 1292, 1435
AclWI	GGATC	2 cut(s)	1204, 1217
AcoI	YGGCCR	5 cut(s)	543, 664, 703, 814, 892
AcsI	RAATTY	2 cut(s)	1019, 1378
AcuI	CTGAAG	1 cut(s)	938
AcyI	GRCGYC	5 cut(s)	501, 519, 783, 987, 1050
AfaI	GTAC	5 cut(s)	411, 438, 1619, 1790, 1804
AfeI	AGCGCT	1 cut(s)	355
AflIII	ACRYGT	3 cut(s)	1108, 1233, 1290
AgeI	ACCGGT	1 cut(s)	466
AjiI	CACGTC	2 cut(s)	856, 1111
AjnI	CCWGG	1 cut(s)	1464
AjuI	GAANNNNNNNTTGG	2 cut(s)	645, 677
Alw21I	GWGCWC	2 cut(s)	447, 699
Alw26I	GTCTC	2 cut(s)	1301, 1641
AlwI	GGATC	2 cut(s)	1204, 1217
Ama87I	CYCGRG	2 cut(s)	1064, 1777
Aor51HI	AGCGCT	1 cut(s)	355
AoxI	GGCC	9 cut(s)	543, 664, 703, 796, 814, 892, 1541, 1686, 1836
ApeKI	GCWGC	9 cut(s)	14, 17, 20, 323, 913, 1144, 1440, 1723, 1771
ApoI	RAATTY	2 cut(s)	1019, 1378
ArsI	GACNNNNNNTTYG	2 cut(s)	1095, 1127
AsiGI	ACCGGT	1 cut(s)	466
Asp700I	GAANNNNTTC	1 cut(s)	280
AspLEI	GCGC	5 cut(s)	356, 521, 976, 1437, 1451
AspS9I	GGNCC	7 cut(s)	577, 763, 877, 949, 1167, 1542, 1570
AsuC2I	CCSGG	3 cut(s)	1046, 1423, 1510
AsuHPI	GGTGA	5 cut(s)	481, 542, 619, 1492, 1600
AsuII	TTCGAA	2 cut(s)	365, 906
AvaI	CYCGRG	2 cut(s)	1064, 1777
AvaII	GGWCC	6 cut(s)	577, 763, 877, 949, 1167, 1570
BamHI	GGATCC	1 cut(s)	1209
BanI	GGYRCC	1 cut(s)	518
BanII	GRGCYC	1 cut(s)	699
BarI	GAAGNNNNNNTAC	2 cut(s)	828, 860
BauI	CACGAG	2 cut(s)	533, 758
BbsI	GAAGAC	1 cut(s)	843
Bbv12I	GWGCWC	2 cut(s)	447, 699
BbvI	GCAGC	9 cut(s)	26, 29, 32, 335, 925, 1131, 1427, 1710, 1758
BccI	CCATC	2 cut(s)	1471, 1667
BceAI	ACGGC	9 cut(s)	532, 580, 586, 651, 718, 829, 879, 1522, 1636
BcgI	CGANNNNNNTGC	2 cut(s)	1205, 1239
BciT130I	CCWGG	1 cut(s)	1466
BciVI	GTATCC	1 cut(s)	1670
BcnI	CCSGG	3 cut(s)	1046, 1423, 1510
BcoDI	GTCTC	2 cut(s)	1301, 1641
BfaI	CTAG	1 cut(s)	1496
BfmI	CTRYAG	3 cut(s)	12, 619, 1145
BfoI	RGCGCY	2 cut(s)	357, 522
BfuAI	ACCTGC	2 cut(s)	612, 1120
BfuI	GTATCC	1 cut(s)	1670
BglI	GCCNNNNNGGC	1 cut(s)	711
BlpI	GCTNAGC	1 cut(s)	977
Bme1390I	CCNGG	4 cut(s)	1046, 1423, 1466, 1510
Bme18I	GGWCC	6 cut(s)	577, 763, 877, 949, 1167, 1570
BmeT110I	CYCGRG	2 cut(s)	1064, 1777
BmgBI	CACGTC	2 cut(s)	856, 1111
BmgT120I	GGNCC	7 cut(s)	577, 763, 877, 949, 1167, 1542, 1570
BmrFI	CCNGG	4 cut(s)	1046, 1423, 1466, 1510
BmrI	ACTGGG	1 cut(s)	1666
BmsI	GCATC	3 cut(s)	335, 723, 1071
BmuI	ACTGGG	1 cut(s)	1666
BpiI	GAAGAC	1 cut(s)	843
BplI	GAGNNNNNCTC	2 cut(s)	109, 141
BpmI	CTGGAG	2 cut(s)	417, 572
Bpu1102I	GCTNAGC	1 cut(s)	977
Bpu14I	TTCGAA	2 cut(s)	365, 906
BpuMI	CCSGG	3 cut(s)	1046, 1423, 1510
BsaHI	GRCGYC	5 cut(s)	501, 519, 783, 987, 1050
BsaI	GGTCTC	2 cut(s)	1301, 1641
BsaWI	WCCGGW	5 cut(s)	439, 466, 473, 1245, 1485
BsaXI	ACNNNNNCTCC	4 cut(s)	1619, 1649, 1700, 1730
Bse118I	RCCGGY	6 cut(s)	26, 466, 538, 545, 794, 1580
Bse1I	ACTGG	4 cut(s)	290, 434, 589, 1661
BseBI	CCWGG	1 cut(s)	1466
BseGI	GGATG	4 cut(s)	326, 395, 753, 1482
BseMII	CTCAG	1 cut(s)	118
BseNI	ACTGG	4 cut(s)	290, 434, 589, 1661
BseRI	GAGGAG	3 cut(s)	716, 1313, 1625
BseX3I	CGGCCG	1 cut(s)	892
BseXI	GCAGC	9 cut(s)	26, 29, 32, 335, 925, 1131, 1427, 1710, 1758
BseYI	CCCAGC	1 cut(s)	1472
Bsh1236I	CGCG	7 cut(s)	657, 744, 974, 1201, 1235, 1292, 1435
Bsh1285I	CGRYCG	2 cut(s)	891, 895
BshFI	GGCC	9 cut(s)	545, 666, 705, 798, 816, 894, 1543, 1688, 1838
BshNI	GGYRCC	1 cut(s)	518
BshTI	ACCGGT	1 cut(s)	466
BsiEI	CGRYCG	2 cut(s)	891, 895
BsiHKAI	GWGCWC	2 cut(s)	447, 699
BsiHKCI	CYCGRG	2 cut(s)	1064, 1777
BsiWI	CGTACG	1 cut(s)	1788
BslFI	GGGAC	3 cut(s)	654, 890, 1153
BsmAI	GTCTC	2 cut(s)	1301, 1641
BsmFI	GGGAC	3 cut(s)	654, 890, 1153
BsmI	GAATGC	2 cut(s)	1228, 1373
BsnI	GGCC	9 cut(s)	545, 666, 705, 798, 816, 894, 1543, 1688, 1838
Bso31I	GGTCTC	2 cut(s)	1301, 1641
BsoBI	CYCGRG	2 cut(s)	1064, 1777
Bsp119I	TTCGAA	2 cut(s)	365, 906
Bsp1286I	GDGCHC	2 cut(s)	447, 699
Bsp143I	GATC	4 cut(s)	930, 1155, 1209, 1317
Bsp1720I	GCTNAGC	1 cut(s)	977
Bsp19I	CCATGG	2 cut(s)	330, 1740
BspANI	GGCC	9 cut(s)	545, 666, 705, 798, 816, 894, 1543, 1688, 1838
BspCNI	CTCAG	1 cut(s)	117
BspFNI	CGCG	7 cut(s)	657, 744, 974, 1201, 1235, 1292, 1435
BspMAI	CTGCAG	3 cut(s)	16, 623, 1149
BspMI	ACCTGC	2 cut(s)	612, 1120
BspPI	GGATC	2 cut(s)	1204, 1217
BspT104I	TTCGAA	2 cut(s)	365, 906
BspT107I	GGYRCC	1 cut(s)	518
BspTNI	GGTCTC	2 cut(s)	1301, 1641
BsrFI	RCCGGY	6 cut(s)	26, 466, 538, 545, 794, 1580
BsrI	ACTGG	4 cut(s)	290, 434, 589, 1661
BssAI	RCCGGY	6 cut(s)	26, 466, 538, 545, 794, 1580
BssMI	GATC	4 cut(s)	930, 1155, 1209, 1317
BssNI	GRCGYC	5 cut(s)	501, 519, 783, 987, 1050
BssSI	CACGAG	2 cut(s)	533, 758
BssT1I	CCWWGG	7 cut(s)	330, 496, 661, 1227, 1563, 1740, 1818
Bst2BI	CACGAG	2 cut(s)	533, 758
Bst2UI	CCWGG	1 cut(s)	1466
Bst4CI	ACNGT	4 cut(s)	641, 849, 889, 1793
Bst6I	CTCTTC	4 cut(s)	97, 136, 563, 974
BstACI	GRCGYC	5 cut(s)	501, 519, 783, 987, 1050
BstBI	TTCGAA	2 cut(s)	365, 906
BstC8I	GCNNGC	7 cut(s)	610, 619, 695, 721, 742, 796, 1836
BstDEI	CTNAG	2 cut(s)	104, 977
BstDSI	CCRYGG	7 cut(s)	330, 700, 742, 772, 957, 1538, 1740
BstEII	GGTNACC	2 cut(s)	469, 548
BstF5I	GGATG	4 cut(s)	326, 395, 753, 1482
BstFNI	CGCG	7 cut(s)	657, 744, 974, 1201, 1235, 1292, 1435
BstH2I	RGCGCY	2 cut(s)	357, 522
BstHHI	GCGC	5 cut(s)	356, 521, 976, 1437, 1451
BstKTI	GATC	4 cut(s)	933, 1158, 1212, 1320
BstMAI	GTCTC	2 cut(s)	1301, 1641
BstMBI	GATC	4 cut(s)	930, 1155, 1209, 1317
BstMCI	CGRYCG	2 cut(s)	891, 895
BstNI	CCWGG	1 cut(s)	1466
BstPI	GGTNACC	2 cut(s)	469, 548
BstSCI	CCNGG	4 cut(s)	1044, 1421, 1464, 1508
BstSFI	CTRYAG	3 cut(s)	12, 619, 1145
BstUI	CGCG	7 cut(s)	657, 744, 974, 1201, 1235, 1292, 1435
BstV1I	GCAGC	9 cut(s)	26, 29, 32, 335, 925, 1131, 1427, 1710, 1758
BstV2I	GAAGAC	1 cut(s)	843
BstX2I	RGATCY	1 cut(s)	1209
BstXI	CCANNNNNNTGG	2 cut(s)	337, 1825
BstYI	RGATCY	1 cut(s)	1209
BstZI	CGGCCG	1 cut(s)	892
BsuI	GTATCC	1 cut(s)	1670
BsuRI	GGCC	9 cut(s)	545, 666, 705, 798, 816, 894, 1543, 1688, 1838
BtgI	CCRYGG	7 cut(s)	330, 700, 742, 772, 957, 1538, 1740
BtgZI	GCGATG	1 cut(s)	700
BtrI	CACGTC	2 cut(s)	856, 1111
BtsCI	GGATG	4 cut(s)	326, 395, 753, 1482
BtsI	GCAGTG	1 cut(s)	9
BtsIMutI	CAGTG	3 cut(s)	9, 297, 864
BveI	ACCTGC	2 cut(s)	612, 1120
Cac8I	GCNNGC	7 cut(s)	610, 619, 695, 721, 742, 796, 1836
CfoI	GCGC	5 cut(s)	356, 521, 976, 1437, 1451
Cfr10I	RCCGGY	6 cut(s)	26, 466, 538, 545, 794, 1580
Cfr13I	GGNCC	7 cut(s)	577, 763, 877, 949, 1167, 1542, 1570
Cfr42I	CCGCGG	1 cut(s)	745
CseI	GACGC	5 cut(s)	490, 772, 1224, 1241, 1378
Csp6I	GTAC	5 cut(s)	410, 437, 1618, 1789, 1803
CspAI	ACCGGT	1 cut(s)	466
CviAII	CATG	8 cut(s)	33, 331, 574, 829, 1078, 1339, 1741, 1799
CviQI	GTAC	5 cut(s)	410, 437, 1618, 1789, 1803
DdeI	CTNAG	2 cut(s)	104, 977
DinI	GGCGCC	1 cut(s)	520
DpnI	GATC	4 cut(s)	932, 1157, 1211, 1319
DpnII	GATC	4 cut(s)	930, 1155, 1209, 1317
DraI	TTTAAA	1 cut(s)	87
DrdI	GACNNNNNNGTC	3 cut(s)	268, 575, 1319
DseDI	GACNNNNNNGTC	3 cut(s)	268, 575, 1319
EaeI	YGGCCR	5 cut(s)	543, 664, 703, 814, 892
EagI	CGGCCG	1 cut(s)	892
Eam1104I	CTCTTC	4 cut(s)	97, 136, 563, 974
EarI	CTCTTC	4 cut(s)	97, 136, 563, 974
EciI	GGCGGA	1 cut(s)	1547
Ecl136II	GAGCTC	1 cut(s)	697
EclXI	CGGCCG	1 cut(s)	892
Eco130I	CCWWGG	7 cut(s)	330, 496, 661, 1227, 1563, 1740, 1818
Eco147I	AGGCCT	1 cut(s)	1838
Eco24I	GRGCYC	1 cut(s)	699
Eco31I	GGTCTC	2 cut(s)	1301, 1641
Eco47I	GGWCC	6 cut(s)	577, 763, 877, 949, 1167, 1570
Eco47III	AGCGCT	1 cut(s)	355
Eco52I	CGGCCG	1 cut(s)	892
Eco53kI	GAGCTC	1 cut(s)	697
Eco57I	CTGAAG	1 cut(s)	938
Eco88I	CYCGRG	2 cut(s)	1064, 1777
Eco91I	GGTNACC	2 cut(s)	469, 548
EcoICRI	GAGCTC	1 cut(s)	697
EcoO109I	RGGNCCY	2 cut(s)	877, 1167
EcoO65I	GGTNACC	2 cut(s)	469, 548
EcoRII	CCWGG	1 cut(s)	1464
EcoT14I	CCWWGG	7 cut(s)	330, 496, 661, 1227, 1563, 1740, 1818
EcoT38I	GRGCYC	1 cut(s)	699
EgeI	GGCGCC	1 cut(s)	520
EheI	GGCGCC	1 cut(s)	520
ErhI	CCWWGG	7 cut(s)	330, 496, 661, 1227, 1563, 1740, 1818
FaeI	CATG	8 cut(s)	36, 334, 577, 832, 1081, 1342, 1744, 1802
FaqI	GGGAC	3 cut(s)	654, 890, 1153
FatI	CATG	8 cut(s)	32, 330, 573, 828, 1077, 1338, 1740, 1798
FauI	CCCGC	5 cut(s)	728, 737, 749, 961, 1616
FblI	GTMKAC	3 cut(s)	504, 804, 1254
FokI	GGATG	4 cut(s)	313, 382, 760, 1489
FriOI	GRGCYC	1 cut(s)	699
FspBI	CTAG	1 cut(s)	1496
FspI	TGCGCA	1 cut(s)	1450
GlaI	GCGC	5 cut(s)	355, 520, 975, 1436, 1450
GsaI	CCCAGC	1 cut(s)	1476
GsuI	CTGGAG	2 cut(s)	417, 572
HaeII	RGCGCY	2 cut(s)	357, 522
HaeIII	GGCC	9 cut(s)	545, 666, 705, 798, 816, 894, 1543, 1688, 1838
HgaI	GACGC	5 cut(s)	490, 772, 1224, 1241, 1378
HhaI	GCGC	5 cut(s)	356, 521, 976, 1437, 1451
Hin1I	GRCGYC	5 cut(s)	501, 519, 783, 987, 1050
Hin1II	CATG	8 cut(s)	36, 334, 577, 832, 1081, 1342, 1744, 1802
Hin6I	GCGC	5 cut(s)	354, 519, 974, 1435, 1449
HinP1I	GCGC	5 cut(s)	354, 519, 974, 1435, 1449
HincII	GTYRAC	1 cut(s)	1431
HindII	GTYRAC	1 cut(s)	1431
HinfI	GANTC	7 cut(s)	481, 488, 756, 777, 1242, 1352, 1456
HphI	GGTGA	5 cut(s)	481, 542, 619, 1492, 1600
Hpy188I	TCNGA	9 cut(s)	107, 400, 512, 755, 835, 996, 1399, 1461, 1720
Hpy188III	TCNNGA	9 cut(s)	273, 485, 533, 1207, 1239, 1285, 1697, 1732, 1779
HpyCH4III	ACNGT	4 cut(s)	641, 849, 889, 1793
HpyCH4IV	ACGT	7 cut(s)	342, 507, 855, 987, 1050, 1110, 1805
HpyCH4V	TGCA	8 cut(s)	14, 175, 621, 1084, 1147, 1338, 1443, 1726
HpyF3I	CTNAG	2 cut(s)	104, 977
HpySE526I	ACGT	7 cut(s)	342, 507, 855, 987, 1050, 1110, 1805
Hsp92I	GRCGYC	5 cut(s)	501, 519, 783, 987, 1050
Hsp92II	CATG	8 cut(s)	36, 334, 577, 832, 1081, 1342, 1744, 1802
HspAI	GCGC	5 cut(s)	354, 519, 974, 1435, 1449
KasI	GGCGCC	1 cut(s)	518
KflI	GGGWCCC	1 cut(s)	1167
KroI	GCCGGC	1 cut(s)	794
KroNI	GCCGGC	1 cut(s)	796
KspI	CCGCGG	1 cut(s)	745
Kzo9I	GATC	4 cut(s)	930, 1155, 1209, 1317
LmnI	GCTCC	9 cut(s)	212, 436, 442, 702, 1300, 1337, 1534, 1627, 1720
Lsp1109I	GCAGC	9 cut(s)	26, 29, 32, 335, 925, 1131, 1427, 1710, 1758
LweI	GCATC	3 cut(s)	335, 723, 1071
MaeI	CTAG	1 cut(s)	1496
MaeII	ACGT	7 cut(s)	342, 507, 855, 987, 1050, 1110, 1805
MaeIII	GTNAC	5 cut(s)	46, 312, 469, 548, 896
MalI	GATC	4 cut(s)	932, 1157, 1211, 1319
MboI	GATC	4 cut(s)	930, 1155, 1209, 1317
MfeI	CAATTG	1 cut(s)	113
MflI	RGATCY	1 cut(s)	1209
MhlI	GDGCHC	2 cut(s)	447, 699
MluCI	AATT	8 cut(s)	113, 141, 163, 1019, 1176, 1378, 1411, 1764
MluI	ACGCGT	2 cut(s)	1233, 1290
Mly113I	GGCGCC	1 cut(s)	519
MlyI	GAGTC	3 cut(s)	482, 750, 1346
MmeI	TCCRAC	2 cut(s)	423, 1698
MroNI	GCCGGC	1 cut(s)	794
MroXI	GAANNNNTTC	1 cut(s)	280
MseI	TTAA	3 cut(s)	39, 86, 1410
MslI	CAYNNNNRTG	2 cut(s)	1079, 1602
MspA1I	CMGCKG	4 cut(s)	744, 916, 1440, 1771
MspR9I	CCNGG	4 cut(s)	1046, 1423, 1466, 1510
MunI	CAATTG	1 cut(s)	113
Mva1269I	GAATGC	2 cut(s)	1228, 1373
MvaI	CCWGG	1 cut(s)	1466
MvnI	CGCG	7 cut(s)	657, 744, 974, 1201, 1235, 1292, 1435
NaeI	GCCGGC	1 cut(s)	796
NarI	GGCGCC	1 cut(s)	519
NciI	CCSGG	3 cut(s)	1046, 1423, 1510
NcoI	CCATGG	2 cut(s)	330, 1740
NdeII	GATC	4 cut(s)	930, 1155, 1209, 1317
NgoMIV	GCCGGC	1 cut(s)	794
NlaIII	CATG	8 cut(s)	36, 334, 577, 832, 1081, 1342, 1744, 1802
NmuCI	GTSAC	2 cut(s)	469, 548
NsbI	TGCGCA	1 cut(s)	1450
NspV	TTCGAA	2 cut(s)	365, 906
PaeR7I	CTCGAG	2 cut(s)	1064, 1777
PaqCI	CACCTGC	1 cut(s)	1120
PceI	AGGCCT	1 cut(s)	1838
PctI	GAATGC	2 cut(s)	1228, 1373
PdiI	GCCGGC	1 cut(s)	796
PdmI	GAANNNNTTC	1 cut(s)	280
PfeI	GAWTC	4 cut(s)	481, 777, 1242, 1456
Pfl23II	CGTACG	1 cut(s)	1788
PflMI	CCANNNNNTGG	1 cut(s)	1132
PinAI	ACCGGT	1 cut(s)	466
PleI	GAGTC	3 cut(s)	482, 750, 1346
PluTI	GGCGCC	1 cut(s)	522
PpsI	GAGTC	3 cut(s)	482, 750, 1346
PpuMI	RGGWCCY	2 cut(s)	877, 1167
PsiI	TTATAA	1 cut(s)	1811
Psp124BI	GAGCTC	1 cut(s)	699
Psp5II	RGGWCCY	2 cut(s)	877, 1167
Psp6I	CCWGG	1 cut(s)	1464
PspEI	GGTNACC	2 cut(s)	469, 548
PspFI	CCCAGC	1 cut(s)	1472
PspGI	CCWGG	1 cut(s)	1464
PspLI	CGTACG	1 cut(s)	1788
PspPI	GGNCC	7 cut(s)	577, 763, 877, 949, 1167, 1542, 1570
PspPPI	RGGWCCY	2 cut(s)	877, 1167
PspXI	VCTCGAGB	1 cut(s)	1064
PsrI	GAACNNNNNNTAC	2 cut(s)	447, 479
PstI	CTGCAG	3 cut(s)	16, 623, 1149
PsuI	RGATCY	1 cut(s)	1209
PvuII	CAGCTG	2 cut(s)	916, 1771
RsaI	GTAC	5 cut(s)	411, 438, 1619, 1790, 1804
RsaNI	GTAC	5 cut(s)	410, 437, 1618, 1789, 1803
RseI	CAYNNNNRTG	2 cut(s)	1079, 1602
SacI	GAGCTC	1 cut(s)	699
SacII	CCGCGG	1 cut(s)	745
SaqAI	TTAA	3 cut(s)	39, 86, 1410
Sau3AI	GATC	4 cut(s)	930, 1155, 1209, 1317
Sau96I	GGNCC	7 cut(s)	577, 763, 877, 949, 1167, 1542, 1570
SbfI	CCTGCAGG	1 cut(s)	623
SchI	GAGTC	3 cut(s)	482, 750, 1346
ScrFI	CCNGG	4 cut(s)	1046, 1423, 1466, 1510
SdaI	CCTGCAGG	1 cut(s)	623
SduI	GDGCHC	2 cut(s)	447, 699
SfaNI	GCATC	3 cut(s)	335, 723, 1071
SfcI	CTRYAG	3 cut(s)	12, 619, 1145
SfoI	GGCGCC	1 cut(s)	520
Sfr274I	CTCGAG	2 cut(s)	1064, 1777
Sfr303I	CCGCGG	1 cut(s)	745
SfuI	TTCGAA	2 cut(s)	365, 906
SgrAI	CRCCGGYG	1 cut(s)	1580
SgrBI	CCGCGG	1 cut(s)	745
SinI	GGWCC	6 cut(s)	577, 763, 877, 949, 1167, 1570
SlaI	CTCGAG	2 cut(s)	1064, 1777
SmiMI	CAYNNNNRTG	2 cut(s)	1079, 1602
SmlI	CTYRAG	2 cut(s)	1064, 1777
SmoI	CTYRAG	2 cut(s)	1064, 1777
Sse8387I	CCTGCAGG	1 cut(s)	623
Sse9I	AATT	8 cut(s)	113, 141, 163, 1019, 1176, 1378, 1411, 1764
SseBI	AGGCCT	1 cut(s)	1838
SspDI	GGCGCC	1 cut(s)	518
SspMI	CTAG	1 cut(s)	1496
SstI	GAGCTC	1 cut(s)	699
StuI	AGGCCT	1 cut(s)	1838
StyD4I	CCNGG	4 cut(s)	1044, 1421, 1464, 1508
StyI	CCWWGG	7 cut(s)	330, 496, 661, 1227, 1563, 1740, 1818
TaaI	ACNGT	4 cut(s)	641, 849, 889, 1793
TaiI	ACGT	7 cut(s)	345, 510, 858, 990, 1053, 1113, 1808
TaqI	TCGA	8 cut(s)	365, 453, 561, 906, 1053, 1065, 1215, 1778
TaqII	GACCGA	1 cut(s)	1325
TasI	AATT	8 cut(s)	113, 141, 163, 1019, 1176, 1378, 1411, 1764
TatI	WGTACW	1 cut(s)	409
TauI	GCSGC	3 cut(s)	298, 1035, 1440
TfiI	GAWTC	4 cut(s)	481, 777, 1242, 1456
Tru1I	TTAA	3 cut(s)	39, 86, 1410
Tru9I	TTAA	3 cut(s)	39, 86, 1410
TscAI	CASTG	3 cut(s)	16, 297, 871
TseFI	GTSAC	2 cut(s)	469, 548
TseI	GCWGC	9 cut(s)	14, 17, 20, 323, 913, 1144, 1440, 1723, 1771
Tsp45I	GTSAC	2 cut(s)	469, 548
TspDTI	ATGAA	1 cut(s)	1787
TspGWI	ACGGA	3 cut(s)	615, 789, 1776
TspRI	CASTG	3 cut(s)	16, 297, 871
Van91I	CCANNNNNTGG	1 cut(s)	1132
VpaK11BI	GGWCC	6 cut(s)	577, 763, 877, 949, 1167, 1570
XapI	RAATTY	2 cut(s)	1019, 1378
XcmI	CCANNNNNNNNNTGG	1 cut(s)	707
XhoI	CTCGAG	2 cut(s)	1064, 1777
XmiI	GTMKAC	3 cut(s)	504, 804, 1254
XmnI	GAANNNNTTC	1 cut(s)	280
XspI	CTAG	1 cut(s)	1496
ZraI	GACGTC	2 cut(s)	988, 1051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.