Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0013873

Physical Location & Seq

Genomic Coordinates Reverse (-)

33773983 .. 33775827

Gene Structure 1845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1207300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGCCTTCCACTGCAGCAGCCACCGGCACATGGGTTAAGCCTGTTACTACTACTACTACTACTACAAGACACCGCCACCTTTCTTCTTTAAACTCTTCAAATCCTCTCAGAAAACAATTGAGATTTTCTCCCTCTTCTTCCTCAATTTTCAAATCAAACACTCTAAATTGCTCTCTGCAAACCCCTTCTCTAATCCAAATCCCAAAACGCTCCCCTTCCTATCAACAACCTTCAACTCCCACTAAAATCCCAAGAGAAGATAAGACCCAAAAGTCCAAAACTTCTTCAAAGCCAGTGCCGCAACAATGGAACTTGTTACAGAGAGCAGCATCCATGGCTTTGGACATAATGGAGAGCGCTCTGCTTTCGAAAGAAAAACAAACCCCACTTCCCAAAACATCCGACCCAAAAGTACAGATTGCCGGAAACTTCGCTCCTGTACCGGAGCACCCCGTCGAACATTCTCTACCGGTGACCGGAAAGATTCCTGACTCAATCCAAGGCGTCTACGTCCGAAACGGCGCCAACCCACTTCACGAGCCGGTGGCCGGTCACCACCTCTTCGACGGCGACGGCATGGTCCACGCCCTCCAGTTCAAAGATGGAACCGCCAGCTACGCCTGCAGGTTCACCGAAACGCACCGTATGAGCCAAGAACGCGACCTCGGCCGTCCCCTGTTTCCCAAAGCCATTGGCGAGCTCCACGGCCACTCTGGCATCGCCCGCCTCCTCCTTTTCTACGCCCGCGGGATGTTCGGACTCGTGGACCCAAGCCACGGAATCGGCGTCGCCAACGCCGGCCTCGTCTACCACAACGGCCACCTTCTCGCCATGTCCGAAGATGACTTGCCGTATCACGTCCAAATCACTGAAACAGGGGACCTCAAAACGGTCGGCCGTTACGACTTCGAAGGGCAGCTGAAGTCCACAATGATCGCCCACCCGAAGGTGGACCCCGCCACGGGCGAACTCTTCGCGCTTAGCTACGACGTCGTTCAGAAGCCATACCTCAAATACTTCAAATTCTCCCCAAGCGGCGACAAATCCCCGGACGTCGAAATCAACCTCGAGCAACCCACCATGATGCACGACTTCGCCATTACCGAACGACACGTCGTAATCCCCGACCAGCAGGTGGTGTTCAAGCTGCAGGAGATGATCGGCGGTGGGTCCCCCGTAATTTACGACAAGAACAAGATGTCGCGTTTCGGGATCCTCGACAAGAATGCCAAGGACGCGTCGGGAATCCAGTGGGTCGACTGCCCCGACTGCTTCTGCTTCCACCTCTGGAACGCGTGGGAGGAGCCGGAGACCGACGAGATCGTCGTAATCGGCTCCTGCATGACACCGCCGGACTCCATTTTCAACGAATGCGACGAGAATTTAGAAAGCGTCTTGTCAGAAATCCGGCTTAATTTGAAAACCGAGAAGTCAACGCGCCGCCGCATTTGCGCAGAGAATCTGAACCTGGAAGCTGGGATGGTGAACCGGAACAGGCTAGGGAGAAAAACCCGGTTCACTTATTTGGCTCTCGCGGAGCCGTGGCCCAAAGTTTCGGGCTTTGCCAAGGTGGACCTCTCCACCGGCGAGGTGAAGAAGCATATCTATGGCGAGGAGAAGTACGGCGGGGAGCCTCTGTTTCTTCCCAGAGACCCCAACTCGGAGAATGAGGACGATGGATACATTTTGGCCTTCGTTCACGACGAGAAGGAGTGGAAGTCGGAGCTGCAAATCGTGAACGCCATGGATTTGAAGGTGGAAGCTACAATTCAGCTGCCCTCGAGAGTTCCGTACGGTTTTCATGGTACGTTTATAAGTGCCAAGGACTTGGAGATGCAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042538 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

615

Amino Acids

68.48

Weight (kDa)

6.35

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	144 - 606	3.5e-132	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0013873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78390
fragaria_vesca	FvH4_3g16730
malus_domestica	MD05G1207300.v1.1 MD10G1194200.v1.1
prunus_persica	Prupe.4G150100_v2.0.a1
pyrus_communis	pycom05g19340 pycom10g16810
rosa_chinensis	RchiOBHm_Chr5g0027901
rosa_laevigata	RLG00000033052
rosa_multiflora	Rmu_sc0000309.1_g000029
rosa_roxburghii	Rroxscaffold_1G00051730
rosa_rugosa	Rorug05G0102400.1
rosa_samantha	Rh5AG196700 Rh5BG194600 Rh5CG214600 Rh5DG196300
rosa_wichuraiana	Rw5G017900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1814
AarI	CACCTGC	1 cut(s)	1123
AasI	GACNNNNNNGTC	3 cut(s)	271, 578, 1322
AatII	GACGTC	2 cut(s)	993, 1056
Acc16I	TGCGCA	1 cut(s)	1453
Acc36I	ACCTGC	2 cut(s)	615, 1123
AccB1I	GGYRCC	1 cut(s)	521
AccB7I	CCANNNNNTGG	1 cut(s)	1135
AccI	GTMKAC	3 cut(s)	507, 807, 1257
AccII	CGCG	8 cut(s)	660, 747, 977, 1204, 1238, 1295, 1438, 1535
AclWI	GGATC	2 cut(s)	1207, 1220
AcoI	YGGCCR	5 cut(s)	546, 667, 706, 817, 895
AcsI	RAATTY	2 cut(s)	1022, 1381
AcuI	CTGAAG	1 cut(s)	941
AcyI	GRCGYC	5 cut(s)	504, 522, 786, 990, 1053
AfaI	GTAC	5 cut(s)	414, 441, 1622, 1793, 1807
AfeI	AGCGCT	1 cut(s)	358
AflIII	ACRYGT	3 cut(s)	1111, 1236, 1293
AgeI	ACCGGT	1 cut(s)	469
AjiI	CACGTC	2 cut(s)	859, 1114
AjnI	CCWGG	1 cut(s)	1467
AluBI	AGCT	9 cut(s)	615, 700, 919, 984, 1147, 1475, 1726, 1763, 1774
AluI	AGCT	9 cut(s)	615, 700, 919, 984, 1147, 1475, 1726, 1763, 1774
Alw21I	GWGCWC	2 cut(s)	450, 702
Alw26I	GTCTC	2 cut(s)	1304, 1644
AlwI	GGATC	2 cut(s)	1207, 1220
Ama87I	CYCGRG	2 cut(s)	1067, 1780
Aor51HI	AGCGCT	1 cut(s)	358
AoxI	GGCC	9 cut(s)	546, 667, 706, 799, 817, 895, 1544, 1689, 1839
ApeKI	GCWGC	7 cut(s)	14, 17, 326, 916, 1147, 1726, 1774
ApoI	RAATTY	2 cut(s)	1022, 1381
ArsI	GACNNNNNNTTYG	2 cut(s)	1098, 1130
AsiGI	ACCGGT	1 cut(s)	469
AspLEI	GCGC	5 cut(s)	359, 524, 979, 1440, 1454
AspS9I	GGNCC	7 cut(s)	580, 766, 880, 952, 1170, 1545, 1573
AsuC2I	CCSGG	2 cut(s)	1049, 1513
AsuHPI	GGTGA	5 cut(s)	484, 545, 622, 1495, 1603
AsuII	TTCGAA	2 cut(s)	368, 909
AvaI	CYCGRG	2 cut(s)	1067, 1780
AvaII	GGWCC	6 cut(s)	580, 766, 880, 952, 1170, 1573
BamHI	GGATCC	1 cut(s)	1212
BanI	GGYRCC	1 cut(s)	521
BanII	GRGCYC	1 cut(s)	702
BauI	CACGAG	2 cut(s)	536, 761
Bbv12I	GWGCWC	2 cut(s)	450, 702
BbvI	GCAGC	7 cut(s)	26, 29, 338, 928, 1134, 1713, 1761
BccI	CCATC	3 cut(s)	596, 1474, 1670
BcgI	CGANNNNNNTGC	2 cut(s)	1208, 1242
BciT130I	CCWGG	1 cut(s)	1469
BciVI	GTATCC	1 cut(s)	1673
BcnI	CCSGG	2 cut(s)	1049, 1513
BcoDI	GTCTC	2 cut(s)	1304, 1644
BfaI	CTAG	1 cut(s)	1499
BfmI	CTRYAG	3 cut(s)	12, 622, 1148
BfoI	RGCGCY	2 cut(s)	360, 525
BfuAI	ACCTGC	2 cut(s)	615, 1123
BfuI	GTATCC	1 cut(s)	1673
BglI	GCCNNNNNGGC	1 cut(s)	714
BlpI	GCTNAGC	1 cut(s)	980
Bme1390I	CCNGG	3 cut(s)	1049, 1469, 1513
Bme18I	GGWCC	6 cut(s)	580, 766, 880, 952, 1170, 1573
BmeT110I	CYCGRG	2 cut(s)	1067, 1780
BmgBI	CACGTC	2 cut(s)	859, 1114
BmgT120I	GGNCC	7 cut(s)	580, 766, 880, 952, 1170, 1545, 1573
BmrFI	CCNGG	3 cut(s)	1049, 1469, 1513
BmsI	GCATC	4 cut(s)	338, 726, 1074, 1824
BplI	GAGNNNNNCTC	2 cut(s)	112, 144
BpmI	CTGGAG	1 cut(s)	575
Bpu1102I	GCTNAGC	1 cut(s)	980
Bpu14I	TTCGAA	2 cut(s)	368, 909
BpuMI	CCSGG	2 cut(s)	1049, 1513
BsaHI	GRCGYC	5 cut(s)	504, 522, 786, 990, 1053
BsaI	GGTCTC	2 cut(s)	1304, 1644
BsaWI	WCCGGW	4 cut(s)	442, 469, 476, 1488
BsaXI	ACNNNNNCTCC	4 cut(s)	1622, 1652, 1703, 1733
Bse118I	RCCGGY	6 cut(s)	23, 469, 541, 548, 797, 1583
Bse1I	ACTGG	3 cut(s)	293, 592, 1249
BseBI	CCWGG	1 cut(s)	1469
BseGI	GGATG	4 cut(s)	329, 398, 756, 1485
BseMII	CTCAG	1 cut(s)	121
BseNI	ACTGG	3 cut(s)	293, 592, 1249
BseRI	GAGGAG	3 cut(s)	719, 1316, 1628
BseX3I	CGGCCG	2 cut(s)	667, 895
BseXI	GCAGC	7 cut(s)	26, 29, 338, 928, 1134, 1713, 1761
BseYI	CCCAGC	1 cut(s)	1475
Bsh1236I	CGCG	8 cut(s)	660, 747, 977, 1204, 1238, 1295, 1438, 1535
Bsh1285I	CGRYCG	3 cut(s)	670, 894, 898
BshFI	GGCC	9 cut(s)	548, 669, 708, 801, 819, 897, 1546, 1691, 1841
BshNI	GGYRCC	1 cut(s)	521
BshTI	ACCGGT	1 cut(s)	469
BsiEI	CGRYCG	3 cut(s)	670, 894, 898
BsiHKAI	GWGCWC	2 cut(s)	450, 702
BsiHKCI	CYCGRG	2 cut(s)	1067, 1780
BsiWI	CGTACG	1 cut(s)	1791
BslFI	GGGAC	3 cut(s)	657, 893, 1156
BsmAI	GTCTC	2 cut(s)	1304, 1644
BsmFI	GGGAC	3 cut(s)	657, 893, 1156
BsmI	GAATGC	2 cut(s)	1231, 1376
BsnI	GGCC	9 cut(s)	548, 669, 708, 801, 819, 897, 1546, 1691, 1841
Bso31I	GGTCTC	2 cut(s)	1304, 1644
BsoBI	CYCGRG	2 cut(s)	1067, 1780
Bsp119I	TTCGAA	2 cut(s)	368, 909
Bsp1286I	GDGCHC	2 cut(s)	450, 702
Bsp143I	GATC	4 cut(s)	933, 1158, 1212, 1320
Bsp1720I	GCTNAGC	1 cut(s)	980
Bsp19I	CCATGG	2 cut(s)	333, 1743
BspANI	GGCC	9 cut(s)	548, 669, 708, 801, 819, 897, 1546, 1691, 1841
BspCNI	CTCAG	1 cut(s)	120
BspFNI	CGCG	8 cut(s)	660, 747, 977, 1204, 1238, 1295, 1438, 1535
BspMAI	CTGCAG	3 cut(s)	16, 626, 1152
BspMI	ACCTGC	2 cut(s)	615, 1123
BspPI	GGATC	2 cut(s)	1207, 1220
BspT104I	TTCGAA	2 cut(s)	368, 909
BspT107I	GGYRCC	1 cut(s)	521
BspTNI	GGTCTC	2 cut(s)	1304, 1644
BsrFI	RCCGGY	6 cut(s)	23, 469, 541, 548, 797, 1583
BsrI	ACTGG	3 cut(s)	293, 592, 1249
BssAI	RCCGGY	6 cut(s)	23, 469, 541, 548, 797, 1583
BssMI	GATC	4 cut(s)	933, 1158, 1212, 1320
BssNI	GRCGYC	5 cut(s)	504, 522, 786, 990, 1053
BssSI	CACGAG	2 cut(s)	536, 761
BssT1I	CCWWGG	6 cut(s)	333, 499, 1230, 1566, 1743, 1821
Bst2BI	CACGAG	2 cut(s)	536, 761
Bst2UI	CCWGG	1 cut(s)	1469
Bst4CI	ACNGT	3 cut(s)	644, 892, 1796
Bst6I	CTCTTC	4 cut(s)	100, 139, 566, 977
BstACI	GRCGYC	5 cut(s)	504, 522, 786, 990, 1053
BstBI	TTCGAA	2 cut(s)	368, 909
BstC8I	GCNNGC	7 cut(s)	613, 622, 698, 724, 745, 799, 1839
BstDEI	CTNAG	2 cut(s)	107, 980
BstDSI	CCRYGG	7 cut(s)	333, 703, 745, 775, 960, 1541, 1743
BstEII	GGTNACC	2 cut(s)	472, 551
BstF5I	GGATG	4 cut(s)	329, 398, 756, 1485
BstFNI	CGCG	8 cut(s)	660, 747, 977, 1204, 1238, 1295, 1438, 1535
BstH2I	RGCGCY	2 cut(s)	360, 525
BstHHI	GCGC	5 cut(s)	359, 524, 979, 1440, 1454
BstKTI	GATC	4 cut(s)	936, 1161, 1215, 1323
BstMAI	GTCTC	2 cut(s)	1304, 1644
BstMBI	GATC	4 cut(s)	933, 1158, 1212, 1320
BstMCI	CGRYCG	3 cut(s)	670, 894, 898
BstNI	CCWGG	1 cut(s)	1469
BstPI	GGTNACC	2 cut(s)	472, 551
BstSCI	CCNGG	3 cut(s)	1047, 1467, 1511
BstSFI	CTRYAG	3 cut(s)	12, 622, 1148
BstUI	CGCG	8 cut(s)	660, 747, 977, 1204, 1238, 1295, 1438, 1535
BstV1I	GCAGC	7 cut(s)	26, 29, 338, 928, 1134, 1713, 1761
BstX2I	RGATCY	1 cut(s)	1212
BstXI	CCANNNNNNTGG	2 cut(s)	340, 1828
BstYI	RGATCY	1 cut(s)	1212
BstZI	CGGCCG	2 cut(s)	667, 895
BsuI	GTATCC	1 cut(s)	1673
BsuRI	GGCC	9 cut(s)	548, 669, 708, 801, 819, 897, 1546, 1691, 1841
BtgI	CCRYGG	7 cut(s)	333, 703, 745, 775, 960, 1541, 1743
BtgZI	GCGATG	1 cut(s)	703
BtrI	CACGTC	2 cut(s)	859, 1114
BtsCI	GGATG	4 cut(s)	329, 398, 756, 1485
BtsI	GCAGTG	1 cut(s)	9
BtsIMutI	CAGTG	4 cut(s)	9, 300, 867, 1256
BveI	ACCTGC	2 cut(s)	615, 1123
Cac8I	GCNNGC	7 cut(s)	613, 622, 698, 724, 745, 799, 1839
CfoI	GCGC	5 cut(s)	359, 524, 979, 1440, 1454
Cfr10I	RCCGGY	6 cut(s)	23, 469, 541, 548, 797, 1583
Cfr13I	GGNCC	7 cut(s)	580, 766, 880, 952, 1170, 1545, 1573
Cfr42I	CCGCGG	1 cut(s)	748
CseI	GACGC	5 cut(s)	493, 775, 1227, 1244, 1381
Csp6I	GTAC	5 cut(s)	413, 440, 1621, 1792, 1806
CspAI	ACCGGT	1 cut(s)	469
CviAII	CATG	8 cut(s)	30, 334, 577, 832, 1081, 1342, 1744, 1802
CviQI	GTAC	5 cut(s)	413, 440, 1621, 1792, 1806
DdeI	CTNAG	2 cut(s)	107, 980
DinI	GGCGCC	1 cut(s)	523
DpnI	GATC	4 cut(s)	935, 1160, 1214, 1322
DpnII	GATC	4 cut(s)	933, 1158, 1212, 1320
DraI	TTTAAA	1 cut(s)	90
DrdI	GACNNNNNNGTC	3 cut(s)	271, 578, 1322
DseDI	GACNNNNNNGTC	3 cut(s)	271, 578, 1322
EaeI	YGGCCR	5 cut(s)	546, 667, 706, 817, 895
EagI	CGGCCG	2 cut(s)	667, 895
Eam1104I	CTCTTC	4 cut(s)	100, 139, 566, 977
EarI	CTCTTC	4 cut(s)	100, 139, 566, 977
Ecl136II	GAGCTC	1 cut(s)	700
EclXI	CGGCCG	2 cut(s)	667, 895
Eco130I	CCWWGG	6 cut(s)	333, 499, 1230, 1566, 1743, 1821
Eco147I	AGGCCT	1 cut(s)	1841
Eco24I	GRGCYC	1 cut(s)	702
Eco31I	GGTCTC	2 cut(s)	1304, 1644
Eco47I	GGWCC	6 cut(s)	580, 766, 880, 952, 1170, 1573
Eco47III	AGCGCT	1 cut(s)	358
Eco52I	CGGCCG	2 cut(s)	667, 895
Eco53kI	GAGCTC	1 cut(s)	700
Eco57I	CTGAAG	1 cut(s)	941
Eco88I	CYCGRG	2 cut(s)	1067, 1780
Eco91I	GGTNACC	2 cut(s)	472, 551
EcoICRI	GAGCTC	1 cut(s)	700
EcoO109I	RGGNCCY	2 cut(s)	880, 1170
EcoO65I	GGTNACC	2 cut(s)	472, 551
EcoRII	CCWGG	1 cut(s)	1467
EcoT14I	CCWWGG	6 cut(s)	333, 499, 1230, 1566, 1743, 1821
EcoT38I	GRGCYC	1 cut(s)	702
EgeI	GGCGCC	1 cut(s)	523
EheI	GGCGCC	1 cut(s)	523
ErhI	CCWWGG	6 cut(s)	333, 499, 1230, 1566, 1743, 1821
FaeI	CATG	8 cut(s)	33, 337, 580, 835, 1084, 1345, 1747, 1805
FaqI	GGGAC	3 cut(s)	657, 893, 1156
FatI	CATG	8 cut(s)	29, 333, 576, 831, 1080, 1341, 1743, 1801
FauI	CCCGC	5 cut(s)	731, 740, 752, 964, 1619
FblI	GTMKAC	3 cut(s)	507, 807, 1257
FokI	GGATG	4 cut(s)	316, 385, 763, 1492
FriOI	GRGCYC	1 cut(s)	702
FspBI	CTAG	1 cut(s)	1499
FspI	TGCGCA	1 cut(s)	1453
GlaI	GCGC	5 cut(s)	358, 523, 978, 1439, 1453
GsaI	CCCAGC	1 cut(s)	1479
GsuI	CTGGAG	1 cut(s)	575
HaeII	RGCGCY	2 cut(s)	360, 525
HaeIII	GGCC	9 cut(s)	548, 669, 708, 801, 819, 897, 1546, 1691, 1841
HgaI	GACGC	5 cut(s)	493, 775, 1227, 1244, 1381
HhaI	GCGC	5 cut(s)	359, 524, 979, 1440, 1454
Hin1I	GRCGYC	5 cut(s)	504, 522, 786, 990, 1053
Hin1II	CATG	8 cut(s)	33, 337, 580, 835, 1084, 1345, 1747, 1805
Hin6I	GCGC	5 cut(s)	357, 522, 977, 1438, 1452
HinP1I	GCGC	5 cut(s)	357, 522, 977, 1438, 1452
HincII	GTYRAC	2 cut(s)	1258, 1434
HindII	GTYRAC	2 cut(s)	1258, 1434
HinfI	GANTC	7 cut(s)	484, 491, 759, 780, 1245, 1355, 1459
HphI	GGTGA	5 cut(s)	484, 545, 622, 1495, 1603
Hpy188III	TCNNGA	8 cut(s)	488, 536, 1210, 1242, 1288, 1700, 1735, 1782
HpyCH4III	ACNGT	3 cut(s)	644, 892, 1796
HpyCH4IV	ACGT	6 cut(s)	510, 858, 990, 1053, 1113, 1808
HpyCH4V	TGCA	8 cut(s)	14, 178, 624, 1087, 1150, 1341, 1729, 1837
HpyF3I	CTNAG	2 cut(s)	107, 980
HpySE526I	ACGT	6 cut(s)	510, 858, 990, 1053, 1113, 1808
Hsp92I	GRCGYC	5 cut(s)	504, 522, 786, 990, 1053
Hsp92II	CATG	8 cut(s)	33, 337, 580, 835, 1084, 1345, 1747, 1805
HspAI	GCGC	5 cut(s)	357, 522, 977, 1438, 1452
KasI	GGCGCC	1 cut(s)	521
KflI	GGGWCCC	1 cut(s)	1170
KroI	GCCGGC	1 cut(s)	797
KroNI	GCCGGC	1 cut(s)	799
KspI	CCGCGG	1 cut(s)	748
Kzo9I	GATC	4 cut(s)	933, 1158, 1212, 1320
LmnI	GCTCC	9 cut(s)	215, 439, 445, 705, 1303, 1340, 1537, 1630, 1723
Lsp1109I	GCAGC	7 cut(s)	26, 29, 338, 928, 1134, 1713, 1761
LweI	GCATC	4 cut(s)	338, 726, 1074, 1824
MaeI	CTAG	1 cut(s)	1499
MaeII	ACGT	6 cut(s)	510, 858, 990, 1053, 1113, 1808
MaeIII	GTNAC	5 cut(s)	43, 315, 472, 551, 899
MalI	GATC	4 cut(s)	935, 1160, 1214, 1322
MboI	GATC	4 cut(s)	933, 1158, 1212, 1320
MfeI	CAATTG	1 cut(s)	116
MflI	RGATCY	1 cut(s)	1212
MhlI	GDGCHC	2 cut(s)	450, 702
MluCI	AATT	8 cut(s)	116, 144, 166, 1022, 1179, 1381, 1414, 1767
MluI	ACGCGT	2 cut(s)	1236, 1293
Mly113I	GGCGCC	1 cut(s)	522
MlyI	GAGTC	3 cut(s)	485, 753, 1349
MmeI	TCCRAC	2 cut(s)	426, 1701
MroNI	GCCGGC	1 cut(s)	797
MseI	TTAA	3 cut(s)	36, 89, 1413
MslI	CAYNNNNRTG	2 cut(s)	1082, 1605
MspA1I	CMGCKG	3 cut(s)	747, 919, 1774
MspR9I	CCNGG	3 cut(s)	1049, 1469, 1513
MunI	CAATTG	1 cut(s)	116
Mva1269I	GAATGC	2 cut(s)	1231, 1376
MvaI	CCWGG	1 cut(s)	1469
MvnI	CGCG	8 cut(s)	660, 747, 977, 1204, 1238, 1295, 1438, 1535
NaeI	GCCGGC	1 cut(s)	799
NarI	GGCGCC	1 cut(s)	522
NciI	CCSGG	2 cut(s)	1049, 1513
NcoI	CCATGG	2 cut(s)	333, 1743
NdeII	GATC	4 cut(s)	933, 1158, 1212, 1320
NgoMIV	GCCGGC	1 cut(s)	797
NlaIII	CATG	8 cut(s)	33, 337, 580, 835, 1084, 1345, 1747, 1805
NmeAIII	GCCGAG	1 cut(s)	645
NmuCI	GTSAC	2 cut(s)	472, 551
NsbI	TGCGCA	1 cut(s)	1453
NspV	TTCGAA	2 cut(s)	368, 909
PaeR7I	CTCGAG	2 cut(s)	1067, 1780
PaqCI	CACCTGC	1 cut(s)	1123
PceI	AGGCCT	1 cut(s)	1841
PctI	GAATGC	2 cut(s)	1231, 1376
PdiI	GCCGGC	1 cut(s)	799
PfeI	GAWTC	4 cut(s)	484, 780, 1245, 1459
Pfl23II	CGTACG	1 cut(s)	1791
PflMI	CCANNNNNTGG	1 cut(s)	1135
PinAI	ACCGGT	1 cut(s)	469
PleI	GAGTC	3 cut(s)	485, 753, 1349
PluTI	GGCGCC	1 cut(s)	525
PpsI	GAGTC	3 cut(s)	485, 753, 1349
PpuMI	RGGWCCY	2 cut(s)	880, 1170
PsiI	TTATAA	1 cut(s)	1814
Psp124BI	GAGCTC	1 cut(s)	702
Psp5II	RGGWCCY	2 cut(s)	880, 1170
Psp6I	CCWGG	1 cut(s)	1467
PspEI	GGTNACC	2 cut(s)	472, 551
PspFI	CCCAGC	1 cut(s)	1475
PspGI	CCWGG	1 cut(s)	1467
PspLI	CGTACG	1 cut(s)	1791
PspPI	GGNCC	7 cut(s)	580, 766, 880, 952, 1170, 1545, 1573
PspPPI	RGGWCCY	2 cut(s)	880, 1170
PspXI	VCTCGAGB	1 cut(s)	1067
PsrI	GAACNNNNNNTAC	2 cut(s)	450, 482
PstI	CTGCAG	3 cut(s)	16, 626, 1152
PsuI	RGATCY	1 cut(s)	1212
PvuII	CAGCTG	2 cut(s)	919, 1774
RsaI	GTAC	5 cut(s)	414, 441, 1622, 1793, 1807
RsaNI	GTAC	5 cut(s)	413, 440, 1621, 1792, 1806
RseI	CAYNNNNRTG	2 cut(s)	1082, 1605
SacI	GAGCTC	1 cut(s)	702
SacII	CCGCGG	1 cut(s)	748
SalI	GTCGAC	1 cut(s)	1256
SaqAI	TTAA	3 cut(s)	36, 89, 1413
Sau3AI	GATC	4 cut(s)	933, 1158, 1212, 1320
Sau96I	GGNCC	7 cut(s)	580, 766, 880, 952, 1170, 1545, 1573
SbfI	CCTGCAGG	1 cut(s)	626
SchI	GAGTC	3 cut(s)	485, 753, 1349
ScrFI	CCNGG	3 cut(s)	1049, 1469, 1513
SdaI	CCTGCAGG	1 cut(s)	626
SduI	GDGCHC	2 cut(s)	450, 702
SfaNI	GCATC	4 cut(s)	338, 726, 1074, 1824
SfcI	CTRYAG	3 cut(s)	12, 622, 1148
SfoI	GGCGCC	1 cut(s)	523
Sfr274I	CTCGAG	2 cut(s)	1067, 1780
Sfr303I	CCGCGG	1 cut(s)	748
SfuI	TTCGAA	2 cut(s)	368, 909
SgrAI	CRCCGGYG	1 cut(s)	1583
SgrBI	CCGCGG	1 cut(s)	748
SinI	GGWCC	6 cut(s)	580, 766, 880, 952, 1170, 1573
SlaI	CTCGAG	2 cut(s)	1067, 1780
SmiMI	CAYNNNNRTG	2 cut(s)	1082, 1605
SmlI	CTYRAG	2 cut(s)	1067, 1780
SmoI	CTYRAG	2 cut(s)	1067, 1780
Sse8387I	CCTGCAGG	1 cut(s)	626
Sse9I	AATT	8 cut(s)	116, 144, 166, 1022, 1179, 1381, 1414, 1767
SseBI	AGGCCT	1 cut(s)	1841
SspDI	GGCGCC	1 cut(s)	521
SspMI	CTAG	1 cut(s)	1499
SstI	GAGCTC	1 cut(s)	702
StuI	AGGCCT	1 cut(s)	1841
StyD4I	CCNGG	3 cut(s)	1047, 1467, 1511
StyI	CCWWGG	6 cut(s)	333, 499, 1230, 1566, 1743, 1821
TaaI	ACNGT	3 cut(s)	644, 892, 1796
TaiI	ACGT	6 cut(s)	513, 861, 993, 1056, 1116, 1811
TaqI	TCGA	9 cut(s)	368, 456, 564, 909, 1056, 1068, 1218, 1257, 1781
TaqII	GACCGA	1 cut(s)	1328
TasI	AATT	8 cut(s)	116, 144, 166, 1022, 1179, 1381, 1414, 1767
TatI	WGTACW	1 cut(s)	412
TauI	GCSGC	4 cut(s)	301, 1038, 1443, 1446
TfiI	GAWTC	4 cut(s)	484, 780, 1245, 1459
Tru1I	TTAA	3 cut(s)	36, 89, 1413
Tru9I	TTAA	3 cut(s)	36, 89, 1413
TscAI	CASTG	4 cut(s)	16, 300, 874, 1256
TseFI	GTSAC	2 cut(s)	472, 551
TseI	GCWGC	7 cut(s)	14, 17, 326, 916, 1147, 1726, 1774
Tsp45I	GTSAC	2 cut(s)	472, 551
TspDTI	ATGAA	1 cut(s)	1790
TspGWI	ACGGA	2 cut(s)	792, 1779
TspRI	CASTG	4 cut(s)	16, 300, 874, 1256
Van91I	CCANNNNNTGG	1 cut(s)	1135
VpaK11BI	GGWCC	6 cut(s)	580, 766, 880, 952, 1170, 1573
XapI	RAATTY	2 cut(s)	1022, 1381
XcmI	CCANNNNNNNNNTGG	2 cut(s)	599, 710
XhoI	CTCGAG	2 cut(s)	1067, 1780
XmiI	GTMKAC	3 cut(s)	507, 807, 1257
XspI	CTAG	1 cut(s)	1499
ZraI	GACGTC	2 cut(s)	991, 1054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.