Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0013873

Physical Location & Seq

Genomic Coordinates Forward (+)

8579868 .. 8584302

Gene Structure 4435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G150100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGCCTTCCACTGCTGCAGCAATAACAGGCACATGGGTTAAGCCTGTTACTACTAGAAGACACCACCTTTCTTCTACATACTCTTCAAATTTAGCTACAAACCAATTGGGTTTTCCCCCCTCTTCCTCCTCCAGCTCAATTTTCTTCAGCAGAAAACCCATTCACAGAAAATCAACCCCAGACACACTCACTTGCTCTCTCCAAGCCCCCTCTCTTCTCCAAATCCCCAACCACACCCCTTCCTATCAGCCGCCTTCCTCATCTTCATCAACCACCCTTTTCACTCCCTCCACAACCTCAAACCCAAAAGAAAACAAGACCCAACCTTCTTCTAAATCCTCAAAGCCAGTACCCCAGCAATGGAACTTCCTACAGAGAGCAGCAGCCATGGCCTTGGACGCAATGGAGAGCGCTCTGCTATCAAAAGAGCAGCAACACCCACTTCCCAAAACAGCTGACCCAAAAGTCCAAATCGCCGGAAACTTTGCTCCAGTACCGGAGCACCCGGTTGAACACTCTCTGCCAGTCACCGGAAAAATCCCGGCCTCAATCCAAGGCGTCTACGTCCGCAACGGTGCCAACCCACTTCACGAGCCGGTCGCCGGCCACCACTTCTTCGACGGCGACGGCATGGTCCACGCCCTGCAATTCAAAGAAGGGGCCGCCAGCTACGCCTGCAGGTTCACCGAAACGCACCGTTTTAGGCAGGAGCGCGACCTCGGGCGTCCCCTGTTCCCAAAAGCCATTGGCGAGCTCCACGGCCATTCCGGTATCGCCCGCCTCCTCCTCTTCTACGCGCGCGGCATGTTCAGCCTCGTGGATCCCACCCACGGCATCGGCGTCGCCAACGCCGGCCTCGTCTACTTCAACGGTCGCCTGCTCGCCATGTCGGAAGACGACTTGCCGTATCACATTAAAATCACCGAAACAGGGGACCTCAAAACGGTCGGTCGTTACGACTTCGATAAACAGCTCAAGTCCACAATGATAGCCCACCCGAAAGTGGACCCCACCACTGGCGAGCTCTTCGCGCTCAGCTACGACGTCGTTCAGAGGCCTTACTTGAAGTACTTCAAGTTCTCGCCGGACGGCGAGAAATCCCCCGACGTCGAAATCAATCTTGACCAGCCCACCATGATGCACGACTTCGCTATCACAGAACGGTATGTCGTAATTCCGGACCAGCAGGTGGTGTTCAAGCTGCAGGAGATGATCACCGGTGGGTCCCCTGTGATCTACGACAAGAACAAGATGTCACGTTTTGGGATTCTCGACAAGAATGCGAAGGACGCTTCGGGGATCCGGTGGGTCGACTGCCCCGATTGCTTCTGCTTCCATCTCTGGAACGCGTGGGAGGAGCCGGAGACGGACGAAGTCGTTGTGATCGGGTCCTGCATGACCCCGGCCGACTCCATTTTCAACGAATGCGACGAGAAATTGGAGAGCGTTCTGTCCGAAATCCGGCTCAATTTGAAAACCGGCAAGTCGACACGGCGCCGTATTTGCGCCGAGAATGTGAATTTGGAAGCCGGGATGGTGAACCGGAACAAACTGGGGAGAAAAACCCGGTTCGCGTACTTGGCTCTGGCCGAGCCGTGGCCCAAAGTTTCGGGCTTTGCCAAAGTGGACCTCTCCACTGGTGAAGTAAAGAAGCATATCTATGGCGACGAGAAGTACGGAGGCGAGCCTCTGTTTCTGCCCAGAGACCCAAATTCGGAGAATGAGGACGATGGGTACATTCTGGCCTTCGTTCACGACGAGAAGGAGTGGAAATCGGAGCTGCAAATCGTGAACGCCATGGATTTGAAAATTGAAGCTACAATTCAATTACCGTCCAGAGTTCCGTACGGTTTTCACGGCACGTTCATAAGTTCCAAGGACTTGGAGAAGCAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0006972 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009791 GO:0009987 GO:0010035 GO:0010154 GO:0010162 GO:0010431 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034357 GO:0042221 GO:0042538 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

633

Amino Acids

70.35

Weight (kDa)

6.63

Isoelectric Point (pI)

45.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78390
fragaria_vesca	FvH4_3g16730
malus_domestica	MD05G1207300.v1.1 MD10G1194200.v1.1
prunus_persica	Prupe.4G150100_v2.0.a1
pyrus_communis	pycom05g19340 pycom10g16810
rosa_chinensis	RchiOBHm_Chr5g0027901
rosa_laevigata	RLG00000033052
rosa_multiflora	Rmu_sc0000309.1_g000029
rosa_roxburghii	Rroxscaffold_1G00051730
rosa_rugosa	Rorug05G0102400.1
rosa_samantha	Rh5AG196700 Rh5BG194600 Rh5CG214600 Rh5DG196300
rosa_wichuraiana	Rw5G017900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1177
AasI	GACNNNNNNGTC	2 cut(s)	464, 632
AatII	GACGTC	2 cut(s)	1047, 1110
Acc36I	ACCTGC	2 cut(s)	669, 1177
AccB1I	GGYRCC	2 cut(s)	575, 1494
AccB7I	CCANNNNNTGG	1 cut(s)	1189
AccI	GTMKAC	4 cut(s)	561, 861, 1311, 1487
AccII	CGCG	7 cut(s)	714, 797, 799, 801, 1031, 1349, 1574
AccIII	TCCGGA	1 cut(s)	1177
AciI	CCGC	5 cut(s)	251, 568, 663, 778, 801
AclWI	GGATC	4 cut(s)	815, 828, 1294, 1307
AcoI	YGGCCR	4 cut(s)	604, 760, 1404, 1587
AcsI	RAATTY	3 cut(s)	88, 1519, 1711
AcuI	CTGAAG	1 cut(s)	130
AcyI	GRCGYC	6 cut(s)	558, 724, 840, 1044, 1107, 1495
AfaI	GTAC	7 cut(s)	351, 495, 1070, 1577, 1676, 1736, 1847
AfeI	AGCGCT	1 cut(s)	412
AflIII	ACRYGT	1 cut(s)	1347
AgeI	ACCGGT	1 cut(s)	1217
AjuI	GAANNNNNNNTTGG	4 cut(s)	96, 128, 1505, 1537
Alw21I	GWGCWC	3 cut(s)	504, 756, 1026
Alw26I	GTCTC	2 cut(s)	1358, 1698
AlwI	GGATC	4 cut(s)	815, 828, 1294, 1307
Ama87I	CYCGRG	1 cut(s)	719
Aor13HI	TCCGGA	1 cut(s)	1177
Aor51HI	AGCGCT	1 cut(s)	412
ApeKI	GCWGC	7 cut(s)	14, 17, 380, 383, 430, 1201, 1780
ApoI	RAATTY	3 cut(s)	88, 1519, 1711
AsiGI	ACCGGT	1 cut(s)	1217
Asp700I	GAANNNNTTC	1 cut(s)	1070
AspLEI	GCGC	7 cut(s)	413, 714, 799, 801, 1033, 1497, 1508
AspS9I	GGNCC	9 cut(s)	634, 660, 934, 1006, 1180, 1224, 1389, 1599, 1627
AsuC2I	CCSGG	5 cut(s)	506, 542, 1403, 1531, 1567
AsuHPI	GGTGA	6 cut(s)	520, 676, 913, 1207, 1549, 1652
AvaI	CYCGRG	1 cut(s)	719
AvaII	GGWCC	7 cut(s)	634, 934, 1006, 1180, 1224, 1389, 1627
BamHI	GGATCC	2 cut(s)	820, 1299
BanI	GGYRCC	2 cut(s)	575, 1494
BanII	GRGCYC	2 cut(s)	756, 1026
BauI	CACGAG	2 cut(s)	590, 815
BbsI	GAAGAC	2 cut(s)	64, 900
Bbv12I	GWGCWC	3 cut(s)	504, 756, 1026
BbvI	GCAGC	6 cut(s)	29, 392, 395, 442, 1188, 1767
BccI	CCATC	3 cut(s)	1344, 1528, 1724
BcgI	CGANNNNNNTGC	4 cut(s)	823, 857, 1262, 1296
BclI	TGATCA	1 cut(s)	1212
BcnI	CCSGG	5 cut(s)	506, 542, 1403, 1531, 1567
BcoDI	GTCTC	2 cut(s)	1358, 1698
BfaI	CTAG	1 cut(s)	54
BfmI	CTRYAG	4 cut(s)	15, 371, 676, 1202
BfoI	RGCGCY	2 cut(s)	414, 1498
BfuAI	ACCTGC	2 cut(s)	669, 1177
BlpI	GCTNAGC	1 cut(s)	1034
BmcAI	AGTACT	1 cut(s)	1070
Bme1390I	CCNGG	5 cut(s)	506, 542, 1403, 1531, 1567
Bme18I	GGWCC	7 cut(s)	634, 934, 1006, 1180, 1224, 1389, 1627
BmeT110I	CYCGRG	1 cut(s)	719
BmgT120I	GGNCC	9 cut(s)	634, 660, 934, 1006, 1180, 1224, 1389, 1599, 1627
BmrFI	CCNGG	5 cut(s)	506, 542, 1403, 1531, 1567
BmrI	ACTGGG	1 cut(s)	1562
BmsI	GCATC	2 cut(s)	843, 1128
BmuI	ACTGGG	1 cut(s)	1562
BpiI	GAAGAC	2 cut(s)	64, 900
BpmI	CTGGAG	2 cut(s)	115, 474
Bpu1102I	GCTNAGC	1 cut(s)	1034
BpuEI	CTTGAG	1 cut(s)	959
BpuMI	CCSGG	5 cut(s)	506, 542, 1403, 1531, 1567
BsaHI	GRCGYC	6 cut(s)	558, 724, 840, 1044, 1107, 1495
BsaI	GGTCTC	1 cut(s)	1698
BsaWI	WCCGGW	7 cut(s)	496, 530, 767, 1177, 1217, 1302, 1542
Bse118I	RCCGGY	5 cut(s)	595, 602, 851, 1217, 1478
Bse1I	ACTGG	6 cut(s)	347, 491, 524, 1021, 1557, 1642
Bse3DI	GCAATG	2 cut(s)	365, 408
BseAI	TCCGGA	1 cut(s)	1177
BseGI	GGATG	1 cut(s)	1539
BseMI	GCAATG	2 cut(s)	365, 408
BseMII	CTCAG	1 cut(s)	1048
BseNI	ACTGG	6 cut(s)	347, 491, 524, 1021, 1557, 1642
BsePI	GCGCGC	1 cut(s)	797
BseRI	GAGGAG	4 cut(s)	118, 773, 776, 1370
BseX3I	CGGCCG	1 cut(s)	1404
BseXI	GCAGC	6 cut(s)	29, 392, 395, 442, 1188, 1767
BseYI	CCCAGC	1 cut(s)	354
Bsh1236I	CGCG	7 cut(s)	714, 797, 799, 801, 1031, 1349, 1574
Bsh1285I	CGRYCG	5 cut(s)	600, 874, 948, 952, 1407
BshNI	GGYRCC	2 cut(s)	575, 1494
BshTI	ACCGGT	1 cut(s)	1217
BsiEI	CGRYCG	5 cut(s)	600, 874, 948, 952, 1407
BsiHKAI	GWGCWC	3 cut(s)	504, 756, 1026
BsiHKCI	CYCGRG	1 cut(s)	719
BsiWI	CGTACG	1 cut(s)	1845
BslFI	GGGAC	3 cut(s)	711, 947, 1210
BsmAI	GTCTC	2 cut(s)	1358, 1698
BsmBI	CGTCTC	1 cut(s)	1358
BsmFI	GGGAC	3 cut(s)	711, 947, 1210
BsmI	GAATGC	2 cut(s)	1285, 1430
Bso31I	GGTCTC	1 cut(s)	1698
BsoBI	CYCGRG	1 cut(s)	719
Bsp1286I	GDGCHC	3 cut(s)	504, 756, 1026
Bsp13I	TCCGGA	1 cut(s)	1177
Bsp143I	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
Bsp1720I	GCTNAGC	1 cut(s)	1034
Bsp19I	CCATGG	2 cut(s)	387, 1797
BspACI	CCGC	5 cut(s)	251, 568, 663, 778, 801
BspCNI	CTCAG	1 cut(s)	1047
BspEI	TCCGGA	1 cut(s)	1177
BspFNI	CGCG	7 cut(s)	714, 797, 799, 801, 1031, 1349, 1574
BspMAI	CTGCAG	3 cut(s)	19, 680, 1206
BspMI	ACCTGC	2 cut(s)	669, 1177
BspPI	GGATC	4 cut(s)	815, 828, 1294, 1307
BspQI	GCTCTTC	1 cut(s)	1031
BspT107I	GGYRCC	2 cut(s)	575, 1494
BspTNI	GGTCTC	1 cut(s)	1698
BsrDI	GCAATG	2 cut(s)	365, 408
BsrFI	RCCGGY	5 cut(s)	595, 602, 851, 1217, 1478
BsrI	ACTGG	6 cut(s)	347, 491, 524, 1021, 1557, 1642
BssAI	RCCGGY	5 cut(s)	595, 602, 851, 1217, 1478
BssHII	GCGCGC	1 cut(s)	797
BssMI	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
BssNI	GRCGYC	6 cut(s)	558, 724, 840, 1044, 1107, 1495
BssSI	CACGAG	2 cut(s)	590, 815
BssT1I	CCWWGG	5 cut(s)	387, 393, 553, 1797, 1875
Bst2BI	CACGAG	2 cut(s)	590, 815
Bst4CI	ACNGT	7 cut(s)	575, 698, 872, 946, 1164, 1833, 1850
Bst6I	CTCTTC	5 cut(s)	88, 127, 219, 794, 1031
BstACI	GRCGYC	6 cut(s)	558, 724, 840, 1044, 1107, 1495
BstDEI	CTNAG	1 cut(s)	1034
BstDSI	CCRYGG	5 cut(s)	387, 757, 829, 1595, 1797
BstF5I	GGATG	1 cut(s)	1539
BstFNI	CGCG	7 cut(s)	714, 797, 799, 801, 1031, 1349, 1574
BstH2I	RGCGCY	2 cut(s)	414, 1498
BstHHI	GCGC	7 cut(s)	413, 714, 799, 801, 1033, 1497, 1508
BstKTI	GATC	5 cut(s)	823, 1215, 1236, 1302, 1386
BstMAI	GTCTC	2 cut(s)	1358, 1698
BstMBI	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
BstMCI	CGRYCG	5 cut(s)	600, 874, 948, 952, 1407
BstNSI	RCATGY	1 cut(s)	808
BstSCI	CCNGG	5 cut(s)	504, 540, 1401, 1529, 1565
BstSFI	CTRYAG	4 cut(s)	15, 371, 676, 1202
BstUI	CGCG	7 cut(s)	714, 797, 799, 801, 1031, 1349, 1574
BstV1I	GCAGC	6 cut(s)	29, 392, 395, 442, 1188, 1767
BstV2I	GAAGAC	2 cut(s)	64, 900
BstX2I	RGATCY	2 cut(s)	820, 1299
BstXI	CCANNNNNNTGG	2 cut(s)	394, 1882
BstYI	RGATCY	2 cut(s)	820, 1299
BstZI	CGGCCG	1 cut(s)	1404
BtgI	CCRYGG	5 cut(s)	387, 757, 829, 1595, 1797
BtsCI	GGATG	1 cut(s)	1539
BtsI	GCAGTG	1 cut(s)	9
BtsIMutI	CAGTG	3 cut(s)	9, 1014, 1635
BveI	ACCTGC	2 cut(s)	669, 1177
CfoI	GCGC	7 cut(s)	413, 714, 799, 801, 1033, 1497, 1508
Cfr10I	RCCGGY	5 cut(s)	595, 602, 851, 1217, 1478
Cfr13I	GGNCC	9 cut(s)	634, 660, 934, 1006, 1180, 1224, 1389, 1599, 1627
CseI	GACGC	5 cut(s)	407, 547, 713, 829, 1298
Csp6I	GTAC	7 cut(s)	350, 494, 1069, 1576, 1675, 1735, 1846
CspAI	ACCGGT	1 cut(s)	1217
CviAII	CATG	8 cut(s)	33, 388, 631, 805, 886, 1135, 1396, 1798
CviQI	GTAC	7 cut(s)	350, 494, 1069, 1576, 1675, 1735, 1846
DdeI	CTNAG	1 cut(s)	1034
DinI	GGCGCC	1 cut(s)	1496
DpnI	GATC	5 cut(s)	822, 1214, 1235, 1301, 1385
DpnII	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
DrdI	GACNNNNNNGTC	2 cut(s)	464, 632
DseDI	GACNNNNNNGTC	2 cut(s)	464, 632
EaeI	YGGCCR	4 cut(s)	604, 760, 1404, 1587
EagI	CGGCCG	1 cut(s)	1404
Eam1104I	CTCTTC	5 cut(s)	88, 127, 219, 794, 1031
EarI	CTCTTC	5 cut(s)	88, 127, 219, 794, 1031
Ecl136II	GAGCTC	2 cut(s)	754, 1024
EclXI	CGGCCG	1 cut(s)	1404
Eco130I	CCWWGG	5 cut(s)	387, 393, 553, 1797, 1875
Eco147I	AGGCCT	2 cut(s)	1057, 1895
Eco24I	GRGCYC	2 cut(s)	756, 1026
Eco31I	GGTCTC	1 cut(s)	1698
Eco47I	GGWCC	7 cut(s)	634, 934, 1006, 1180, 1224, 1389, 1627
Eco47III	AGCGCT	1 cut(s)	412
Eco52I	CGGCCG	1 cut(s)	1404
Eco53kI	GAGCTC	2 cut(s)	754, 1024
Eco57I	CTGAAG	1 cut(s)	130
Eco88I	CYCGRG	1 cut(s)	719
EcoICRI	GAGCTC	2 cut(s)	754, 1024
EcoO109I	RGGNCCY	3 cut(s)	934, 1224, 1389
EcoT14I	CCWWGG	5 cut(s)	387, 393, 553, 1797, 1875
EcoT38I	GRGCYC	2 cut(s)	756, 1026
EgeI	GGCGCC	1 cut(s)	1496
EheI	GGCGCC	1 cut(s)	1496
ErhI	CCWWGG	5 cut(s)	387, 393, 553, 1797, 1875
Esp3I	CGTCTC	1 cut(s)	1358
FaeI	CATG	8 cut(s)	36, 391, 634, 808, 889, 1138, 1399, 1801
FaqI	GGGAC	3 cut(s)	711, 947, 1210
FatI	CATG	8 cut(s)	32, 387, 630, 804, 885, 1134, 1395, 1797
FauI	CCCGC	1 cut(s)	785
FbaI	TGATCA	1 cut(s)	1212
FblI	GTMKAC	4 cut(s)	561, 861, 1311, 1487
FokI	GGATG	1 cut(s)	1546
FriOI	GRGCYC	2 cut(s)	756, 1026
FspBI	CTAG	1 cut(s)	54
GlaI	GCGC	7 cut(s)	412, 713, 798, 800, 1032, 1496, 1507
GsaI	CCCAGC	1 cut(s)	358
GsuI	CTGGAG	2 cut(s)	115, 474
HaeII	RGCGCY	2 cut(s)	414, 1498
HgaI	GACGC	5 cut(s)	407, 547, 713, 829, 1298
HhaI	GCGC	7 cut(s)	413, 714, 799, 801, 1033, 1497, 1508
Hin1I	GRCGYC	6 cut(s)	558, 724, 840, 1044, 1107, 1495
Hin1II	CATG	8 cut(s)	36, 391, 634, 808, 889, 1138, 1399, 1801
Hin6I	GCGC	7 cut(s)	411, 712, 797, 799, 1031, 1495, 1506
HinP1I	GCGC	7 cut(s)	411, 712, 797, 799, 1031, 1495, 1506
HincII	GTYRAC	2 cut(s)	1312, 1488
HindII	GTYRAC	2 cut(s)	1312, 1488
HinfI	GANTC	2 cut(s)	1267, 1409
HphI	GGTGA	6 cut(s)	520, 676, 913, 1207, 1549, 1652
Hpy188I	TCNGA	5 cut(s)	892, 1053, 1456, 1717, 1777
Hpy188III	TCNNGA	8 cut(s)	590, 1121, 1178, 1271, 1342, 1754, 1789, 1836
HpyAV	CCTTC	8 cut(s)	15, 249, 264, 336, 650, 1279, 1756, 1756
HpyCH4III	ACNGT	7 cut(s)	575, 698, 872, 946, 1164, 1833, 1850
HpyCH4IV	ACGT	5 cut(s)	564, 1044, 1107, 1258, 1862
HpyCH4V	TGCA	7 cut(s)	17, 646, 678, 1141, 1204, 1395, 1783
HpyF3I	CTNAG	1 cut(s)	1034
HpySE526I	ACGT	5 cut(s)	564, 1044, 1107, 1258, 1862
Hsp92I	GRCGYC	6 cut(s)	558, 724, 840, 1044, 1107, 1495
Hsp92II	CATG	8 cut(s)	36, 391, 634, 808, 889, 1138, 1399, 1801
HspAI	GCGC	7 cut(s)	411, 712, 797, 799, 1031, 1495, 1506
KasI	GGCGCC	1 cut(s)	1494
KflI	GGGWCCC	1 cut(s)	1224
Kpn2I	TCCGGA	1 cut(s)	1177
KroI	GCCGGC	2 cut(s)	602, 851
KroNI	GCCGGC	2 cut(s)	604, 853
Ksp22I	TGATCA	1 cut(s)	1212
Kzo9I	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
LguI	GCTCTTC	1 cut(s)	1031
LmnI	GCTCC	6 cut(s)	493, 499, 709, 759, 1357, 1777
Lsp1109I	GCAGC	6 cut(s)	29, 392, 395, 442, 1188, 1767
LweI	GCATC	2 cut(s)	843, 1128
MaeI	CTAG	1 cut(s)	54
MaeII	ACGT	5 cut(s)	564, 1044, 1107, 1258, 1862
MaeIII	GTNAC	4 cut(s)	46, 526, 953, 1254
MalI	GATC	5 cut(s)	822, 1214, 1235, 1301, 1385
MauBI	CGCGCGCG	1 cut(s)	797
MboI	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
MfeI	CAATTG	1 cut(s)	104
MflI	RGATCY	2 cut(s)	820, 1299
MhlI	GDGCHC	3 cut(s)	504, 756, 1026
MluI	ACGCGT	1 cut(s)	1347
Mly113I	GGCGCC	1 cut(s)	1495
MlyI	GAGTC	1 cut(s)	1403
MmeI	TCCRAC	1 cut(s)	870
MroI	TCCGGA	1 cut(s)	1177
MroNI	GCCGGC	2 cut(s)	602, 851
MroXI	GAANNNNTTC	1 cut(s)	1070
MseI	TTAA	2 cut(s)	39, 915
MslI	CAYNNNNRTG	2 cut(s)	1136, 1659
MspA1I	CMGCKG	1 cut(s)	455
MspR9I	CCNGG	5 cut(s)	506, 542, 1403, 1531, 1567
MunI	CAATTG	1 cut(s)	104
Mva1269I	GAATGC	2 cut(s)	1285, 1430
MvnI	CGCG	7 cut(s)	714, 797, 799, 801, 1031, 1349, 1574
NaeI	GCCGGC	2 cut(s)	604, 853
NarI	GGCGCC	1 cut(s)	1495
NciI	CCSGG	5 cut(s)	506, 542, 1403, 1531, 1567
NcoI	CCATGG	2 cut(s)	387, 1797
NdeII	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
NgoMIV	GCCGGC	2 cut(s)	602, 851
NlaIII	CATG	8 cut(s)	36, 391, 634, 808, 889, 1138, 1399, 1801
NmeAIII	GCCGAG	2 cut(s)	1534, 1615
NmuCI	GTSAC	2 cut(s)	526, 1254
NspI	RCATGY	1 cut(s)	808
PaqCI	CACCTGC	1 cut(s)	1177
PauI	GCGCGC	1 cut(s)	797
PceI	AGGCCT	2 cut(s)	1057, 1895
PciSI	GCTCTTC	1 cut(s)	1031
PcsI	WCGNNNNNNNCGW	6 cut(s)	837, 855, 954, 1317, 1428, 1755
PctI	GAATGC	2 cut(s)	1285, 1430
PdiI	GCCGGC	2 cut(s)	604, 853
PdmI	GAANNNNTTC	1 cut(s)	1070
PfeI	GAWTC	1 cut(s)	1267
Pfl23II	CGTACG	1 cut(s)	1845
PflFI	GACNNNGTC	1 cut(s)	1373
PflMI	CCANNNNNTGG	1 cut(s)	1189
PinAI	ACCGGT	1 cut(s)	1217
PleI	GAGTC	1 cut(s)	1403
PluTI	GGCGCC	1 cut(s)	1498
PpsI	GAGTC	1 cut(s)	1403
PpuMI	RGGWCCY	3 cut(s)	934, 1224, 1389
Psp124BI	GAGCTC	2 cut(s)	756, 1026
Psp5II	RGGWCCY	3 cut(s)	934, 1224, 1389
PspFI	CCCAGC	1 cut(s)	354
PspLI	CGTACG	1 cut(s)	1845
PspPI	GGNCC	9 cut(s)	634, 660, 934, 1006, 1180, 1224, 1389, 1599, 1627
PspPPI	RGGWCCY	3 cut(s)	934, 1224, 1389
PsrI	GAACNNNNNNTAC	2 cut(s)	1061, 1093
PstI	CTGCAG	3 cut(s)	19, 680, 1206
PsuI	RGATCY	2 cut(s)	820, 1299
PsyI	GACNNNGTC	1 cut(s)	1373
PteI	GCGCGC	1 cut(s)	797
PvuII	CAGCTG	1 cut(s)	455
RsaI	GTAC	7 cut(s)	351, 495, 1070, 1577, 1676, 1736, 1847
RsaNI	GTAC	7 cut(s)	350, 494, 1069, 1576, 1675, 1735, 1846
RseI	CAYNNNNRTG	2 cut(s)	1136, 1659
SacI	GAGCTC	2 cut(s)	756, 1026
SalI	GTCGAC	2 cut(s)	1310, 1486
SapI	GCTCTTC	1 cut(s)	1031
SaqAI	TTAA	2 cut(s)	39, 915
Sau3AI	GATC	5 cut(s)	820, 1212, 1233, 1299, 1383
Sau96I	GGNCC	9 cut(s)	634, 660, 934, 1006, 1180, 1224, 1389, 1599, 1627
SbfI	CCTGCAGG	1 cut(s)	680
ScaI	AGTACT	1 cut(s)	1070
SchI	GAGTC	1 cut(s)	1403
ScrFI	CCNGG	5 cut(s)	506, 542, 1403, 1531, 1567
SdaI	CCTGCAGG	1 cut(s)	680
SduI	GDGCHC	3 cut(s)	504, 756, 1026
SfaNI	GCATC	2 cut(s)	843, 1128
SfcI	CTRYAG	4 cut(s)	15, 371, 676, 1202
SfoI	GGCGCC	1 cut(s)	1496
SgrAI	CRCCGGYG	1 cut(s)	1217
SinI	GGWCC	7 cut(s)	634, 934, 1006, 1180, 1224, 1389, 1627
SmiMI	CAYNNNNRTG	2 cut(s)	1136, 1659
SmlI	CTYRAG	1 cut(s)	974
SmoI	CTYRAG	1 cut(s)	974
Sse8387I	CCTGCAGG	1 cut(s)	680
SseBI	AGGCCT	2 cut(s)	1057, 1895
SsiI	CCGC	5 cut(s)	251, 568, 663, 778, 801
SspDI	GGCGCC	1 cut(s)	1494
SspMI	CTAG	1 cut(s)	54
SstI	GAGCTC	2 cut(s)	756, 1026
StuI	AGGCCT	2 cut(s)	1057, 1895
StyD4I	CCNGG	5 cut(s)	504, 540, 1401, 1529, 1565
StyI	CCWWGG	5 cut(s)	387, 393, 553, 1797, 1875
TaaI	ACNGT	7 cut(s)	575, 698, 872, 946, 1164, 1833, 1850
TaiI	ACGT	5 cut(s)	567, 1047, 1110, 1261, 1865
TaqI	TCGA	6 cut(s)	618, 963, 1110, 1272, 1311, 1487
TaqII	GACCGA	1 cut(s)	938
TatI	WGTACW	1 cut(s)	1068
TauI	GCSGC	3 cut(s)	253, 665, 804
TfiI	GAWTC	1 cut(s)	1267
Tru1I	TTAA	2 cut(s)	39, 915
Tru9I	TTAA	2 cut(s)	39, 915
TscAI	CASTG	3 cut(s)	16, 1021, 1642
TseFI	GTSAC	2 cut(s)	526, 1254
TseI	GCWGC	7 cut(s)	14, 17, 380, 383, 430, 1201, 1780
Tsp45I	GTSAC	2 cut(s)	526, 1254
TspDTI	ATGAA	2 cut(s)	255, 1855
TspGWI	ACGGA	3 cut(s)	1382, 1692, 1833
TspRI	CASTG	3 cut(s)	16, 1021, 1642
Tth111I	GACNNNGTC	1 cut(s)	1373
Van91I	CCANNNNNTGG	1 cut(s)	1189
VpaK11BI	GGWCC	7 cut(s)	634, 934, 1006, 1180, 1224, 1389, 1627
XapI	RAATTY	3 cut(s)	88, 1519, 1711
XceI	RCATGY	1 cut(s)	808
XmiI	GTMKAC	4 cut(s)	561, 861, 1311, 1487
XmnI	GAANNNNTTC	1 cut(s)	1070
XspI	CTAG	1 cut(s)	54
ZraI	GACGTC	2 cut(s)	1045, 1108
ZrmI	AGTACT	1 cut(s)	1070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.