cation H(
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16380 AT1G79400 |
| fragaria_vesca | FvH4_5g20830 FvH4_5g20830 |
| malus_domestica | MD06G1082400.v1.1 |
| prunus_persica | Prupe.5G050500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0207831 |
| rosa_laevigata | RLG00000003284 |
| rosa_multiflora | Rmu_sc0004647.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00251120 |
| rosa_rugosa | Rorug07G0099700 Rorug07G0099800 |
| rosa_samantha | Rh7AG233000 Rh7BG228300 Rh7CG248000 Rh7DG239000 |
| rosa_wichuraiana | Rw7G019980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1371 |
| AccII | CGCG | 4 cut(s) | 953, 1341, 1838, 1898 |
| AccIII | TCCGGA | 2 cut(s) | 1858, 2242 |
| AciI | CCGC | 6 cut(s) | 129, 341, 1341, 1371, 1808, 2129 |
| AclI | AACGTT | 1 cut(s) | 866 |
| AclWI | GGATC | 7 cut(s) | 12, 312, 428, 1045, 1385, 1567, 1647 |
| AcoI | YGGCCR | 1 cut(s) | 130 |
| AcsI | RAATTY | 6 cut(s) | 212, 325, 802, 1013, 1502, 2063 |
| AcuI | CTGAAG | 1 cut(s) | 1067 |
| AfaI | GTAC | 4 cut(s) | 725, 1043, 1422, 1827 |
| AfeI | AGCGCT | 1 cut(s) | 1033 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 416, 733, 848, 1008, 2212, 2249 |
| AflIII | ACRYGT | 2 cut(s) | 524, 1831 |
| AgsI | TTSAA | 6 cut(s) | 74, 299, 331, 501, 632, 2312 |
| AjiI | CACGTC | 1 cut(s) | 1834 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2212, 2244 |
| Alw21I | GWGCWC | 3 cut(s) | 359, 1467, 2195 |
| Alw26I | GTCTC | 5 cut(s) | 1284, 1363, 1942, 1952, 2314 |
| AlwI | GGATC | 7 cut(s) | 12, 312, 428, 1045, 1385, 1567, 1647 |
| Aor13HI | TCCGGA | 2 cut(s) | 1858, 2242 |
| Aor51HI | AGCGCT | 1 cut(s) | 1033 |
| AoxI | GGCC | 4 cut(s) | 130, 373, 1099, 1362 |
| ApeKI | GCWGC | 4 cut(s) | 233, 338, 1181, 1804 |
| ApoI | RAATTY | 6 cut(s) | 212, 325, 802, 1013, 1502, 2063 |
| AspLEI | GCGC | 2 cut(s) | 1034, 1319 |
| AspS9I | GGNCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| AsuHPI | GGTGA | 4 cut(s) | 355, 1201, 2227, 2273 |
| AvaII | GGWCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1439, 1472 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 359 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 291, 323 |
| BauI | CACGAG | 4 cut(s) | 896, 1377, 1589, 1983 |
| BbsI | GAAGAC | 4 cut(s) | 85, 1103, 1271, 1703 |
| Bbv12I | GWGCWC | 3 cut(s) | 359, 1467, 2195 |
| BbvI | GCAGC | 4 cut(s) | 245, 325, 1168, 1816 |
| BccI | CCATC | 5 cut(s) | 1168, 1469, 1685, 1703, 1884 |
| BceAI | ACGGC | 3 cut(s) | 492, 554, 893 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1876, 1910 |
| BclI | TGATCA | 1 cut(s) | 672 |
| BcoDI | GTCTC | 5 cut(s) | 1284, 1363, 1942, 1952, 2314 |
| BfaI | CTAG | 3 cut(s) | 1121, 1202, 2114 |
| BfoI | RGCGCY | 1 cut(s) | 1035 |
| BglII | AGATCT | 1 cut(s) | 1620 |
| BisI | GCNGC | 6 cut(s) | 130, 234, 339, 1182, 1805, 1808 |
| BlsI | GCNGC | 6 cut(s) | 131, 235, 340, 1183, 1806, 1809 |
| Bme18I | GGWCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| BmgBI | CACGTC | 1 cut(s) | 1834 |
| BmgT120I | GGNCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| BmiI | GGNNCC | 5 cut(s) | 6, 142, 710, 1384, 1510 |
| BmsI | GCATC | 4 cut(s) | 488, 954, 1229, 1590 |
| BpiI | GAAGAC | 4 cut(s) | 85, 1103, 1271, 1703 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1360, 1392 |
| BpmI | CTGGAG | 1 cut(s) | 206 |
| BpuEI | CTTGAG | 5 cut(s) | 15, 175, 373, 1295, 1387 |
| Bsa29I | ATCGAT | 1 cut(s) | 1689 |
| BsaJI | CCNNGG | 4 cut(s) | 692, 807, 973, 1941 |
| BsaWI | WCCGGW | 4 cut(s) | 910, 1793, 1858, 2242 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 466, 496 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 416, 733, 848, 1008, 2212, 2249 |
| Bse3DI | GCAATG | 2 cut(s) | 1489, 2128 |
| BseAI | TCCGGA | 2 cut(s) | 1858, 2242 |
| BseCI | ATCGAT | 1 cut(s) | 1689 |
| BseDI | CCNNGG | 4 cut(s) | 692, 807, 973, 1941 |
| BseGI | GGATG | 2 cut(s) | 405, 1867 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 416, 733, 848, 1008, 2212, 2249 |
| BseMI | GCAATG | 2 cut(s) | 1489, 2128 |
| BseMII | CTCAG | 2 cut(s) | 394, 1610 |
| BseRI | GAGGAG | 1 cut(s) | 368 |
| BseXI | GCAGC | 4 cut(s) | 245, 325, 1168, 1816 |
| BseYI | CCCAGC | 2 cut(s) | 161, 1007 |
| BsgI | GTGCAG | 1 cut(s) | 1906 |
| Bsh1236I | CGCG | 4 cut(s) | 953, 1341, 1838, 1898 |
| BshFI | GGCC | 4 cut(s) | 132, 375, 1101, 1364 |
| BshVI | ATCGAT | 1 cut(s) | 1689 |
| BsiHKAI | GWGCWC | 3 cut(s) | 359, 1467, 2195 |
| BsiSI | CCGG | 5 cut(s) | 372, 911, 1794, 1859, 2243 |
| BslFI | GGGAC | 3 cut(s) | 126, 1522, 2103 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 416, 733, 848, 1008, 2212, 2249 |
| BsmAI | GTCTC | 5 cut(s) | 1284, 1363, 1942, 1952, 2314 |
| BsmFI | GGGAC | 3 cut(s) | 126, 1522, 2103 |
| BsmI | GAATGC | 1 cut(s) | 84 |
| BsnI | GGCC | 4 cut(s) | 132, 375, 1101, 1364 |
| Bsp1286I | GDGCHC | 3 cut(s) | 359, 1467, 2195 |
| Bsp13I | TCCGGA | 2 cut(s) | 1858, 2242 |
| Bsp1407I | TGTACA | 1 cut(s) | 1825 |
| Bsp19I | CCATGG | 1 cut(s) | 692 |
| Bsp68I | TCGCGA | 2 cut(s) | 1838, 1898 |
| BspACI | CCGC | 6 cut(s) | 129, 341, 1341, 1371, 1808, 2129 |
| BspANI | GGCC | 4 cut(s) | 132, 375, 1101, 1364 |
| BspCNI | CTCAG | 2 cut(s) | 393, 1609 |
| BspDI | ATCGAT | 1 cut(s) | 1689 |
| BspEI | TCCGGA | 2 cut(s) | 1858, 2242 |
| BspFNI | CGCG | 4 cut(s) | 953, 1341, 1838, 1898 |
| BspHI | TCATGA | 3 cut(s) | 315, 1165, 1459 |
| BspLI | GGNNCC | 5 cut(s) | 6, 142, 710, 1384, 1510 |
| BspPI | GGATC | 7 cut(s) | 12, 312, 428, 1045, 1385, 1567, 1647 |
| BsrBI | CCGCTC | 1 cut(s) | 1371 |
| BsrDI | GCAATG | 2 cut(s) | 1489, 2128 |
| BsrGI | TGTACA | 1 cut(s) | 1825 |
| BssECI | CCNNGG | 4 cut(s) | 692, 807, 973, 1941 |
| BssSI | CACGAG | 4 cut(s) | 896, 1377, 1589, 1983 |
| BssT1I | CCWWGG | 1 cut(s) | 692 |
| Bst2BI | CACGAG | 4 cut(s) | 896, 1377, 1589, 1983 |
| Bst6I | CTCTTC | 3 cut(s) | 641, 1611, 2229 |
| BstAUI | TGTACA | 1 cut(s) | 1825 |
| BstC8I | GCNNGC | 3 cut(s) | 82, 1339, 1896 |
| BstDEI | CTNAG | 8 cut(s) | 380, 685, 881, 1056, 1596, 1745, 2056, 2147 |
| BstDSI | CCRYGG | 1 cut(s) | 692 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 731 |
| BstF5I | GGATG | 2 cut(s) | 405, 1867 |
| BstFNI | CGCG | 4 cut(s) | 953, 1341, 1838, 1898 |
| BstH2I | RGCGCY | 1 cut(s) | 1035 |
| BstHHI | GCGC | 2 cut(s) | 1034, 1319 |
| BstMAI | GTCTC | 5 cut(s) | 1284, 1363, 1942, 1952, 2314 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 659, 1343, 1609 |
| BstNSI | RCATGY | 1 cut(s) | 528 |
| BstUI | CGCG | 4 cut(s) | 953, 1341, 1838, 1898 |
| BstV1I | GCAGC | 4 cut(s) | 245, 325, 1168, 1816 |
| BstV2I | GAAGAC | 4 cut(s) | 85, 1103, 1271, 1703 |
| BstX2I | RGATCY | 5 cut(s) | 4, 304, 1050, 1620, 1639 |
| BstYI | RGATCY | 5 cut(s) | 4, 304, 1050, 1620, 1639 |
| Bsu15I | ATCGAT | 1 cut(s) | 1689 |
| BsuRI | GGCC | 4 cut(s) | 132, 375, 1101, 1364 |
| BsuTUI | ATCGAT | 1 cut(s) | 1689 |
| BtgI | CCRYGG | 1 cut(s) | 692 |
| BtgZI | GCGATG | 1 cut(s) | 934 |
| BtrI | CACGTC | 1 cut(s) | 1834 |
| BtsCI | GGATG | 2 cut(s) | 405, 1867 |
| BtsIMutI | CAGTG | 1 cut(s) | 2171 |
| BtuMI | TCGCGA | 2 cut(s) | 1838, 1898 |
| Cac8I | GCNNGC | 3 cut(s) | 82, 1339, 1896 |
| CciI | TCATGA | 3 cut(s) | 315, 1165, 1459 |
| CfoI | GCGC | 2 cut(s) | 1034, 1319 |
| Cfr13I | GGNCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| ClaI | ATCGAT | 1 cut(s) | 1689 |
| CpoI | CGGWCCG | 1 cut(s) | 1754 |
| CseI | GACGC | 1 cut(s) | 1207 |
| Csp6I | GTAC | 4 cut(s) | 724, 1042, 1421, 1826 |
| CspI | CGGWCCG | 1 cut(s) | 1754 |
| CviQI | GTAC | 4 cut(s) | 724, 1042, 1421, 1826 |
| DdeI | CTNAG | 8 cut(s) | 380, 685, 881, 1056, 1596, 1745, 2056, 2147 |
| EaeI | YGGCCR | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 3 cut(s) | 641, 1611, 2229 |
| EarI | CTCTTC | 3 cut(s) | 641, 1611, 2229 |
| Ecl136II | GAGCTC | 1 cut(s) | 357 |
| Eco130I | CCWWGG | 1 cut(s) | 692 |
| Eco24I | GRGCYC | 1 cut(s) | 359 |
| Eco47I | GGWCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| Eco47III | AGCGCT | 1 cut(s) | 1033 |
| Eco53kI | GAGCTC | 1 cut(s) | 357 |
| Eco57I | CTGAAG | 1 cut(s) | 1067 |
| EcoICRI | GAGCTC | 1 cut(s) | 357 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 731 |
| EcoRI | GAATTC | 3 cut(s) | 212, 1502, 2063 |
| EcoT14I | CCWWGG | 1 cut(s) | 692 |
| EcoT38I | GRGCYC | 1 cut(s) | 359 |
| ErhI | CCWWGG | 1 cut(s) | 692 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 200, 232 |
| FaqI | GGGAC | 3 cut(s) | 126, 1522, 2103 |
| FbaI | TGATCA | 1 cut(s) | 672 |
| Fnu4HI | GCNGC | 6 cut(s) | 130, 234, 339, 1182, 1805, 1808 |
| FokI | GGATG | 2 cut(s) | 392, 1874 |
| FriOI | GRGCYC | 1 cut(s) | 359 |
| Fsp4HI | GCNGC | 6 cut(s) | 130, 234, 339, 1182, 1805, 1808 |
| FspBI | CTAG | 3 cut(s) | 1121, 1202, 2114 |
| GlaI | GCGC | 2 cut(s) | 1033, 1318 |
| GluI | GCNGC | 6 cut(s) | 130, 234, 339, 1182, 1805, 1808 |
| GsaI | CCCAGC | 2 cut(s) | 165, 1011 |
| GsuI | CTGGAG | 1 cut(s) | 206 |
| HaeII | RGCGCY | 1 cut(s) | 1035 |
| HaeIII | GGCC | 4 cut(s) | 132, 375, 1101, 1364 |
| HapII | CCGG | 5 cut(s) | 372, 911, 1794, 1859, 2243 |
| HgaI | GACGC | 1 cut(s) | 1207 |
| HhaI | GCGC | 2 cut(s) | 1034, 1319 |
| Hin6I | GCGC | 2 cut(s) | 1032, 1317 |
| HinP1I | GCGC | 2 cut(s) | 1032, 1317 |
| HincII | GTYRAC | 1 cut(s) | 957 |
| HindII | GTYRAC | 1 cut(s) | 957 |
| HpaI | GTTAAC | 1 cut(s) | 957 |
| HpaII | CCGG | 5 cut(s) | 372, 911, 1794, 1859, 2243 |
| HphI | GGTGA | 4 cut(s) | 355, 1201, 2227, 2273 |
| Hpy166II | GTNNAC | 5 cut(s) | 916, 957, 1152, 1398, 1780 |
| Hpy8I | GTNNAC | 5 cut(s) | 916, 957, 1152, 1398, 1780 |
| Hpy99I | CGWCG | 3 cut(s) | 1201, 1472, 1838 |
| HpyAV | CCTTC | 7 cut(s) | 125, 259, 268, 773, 1240, 1511, 2013 |
| HpyCH4IV | ACGT | 4 cut(s) | 440, 579, 866, 1833 |
| HpyCH4V | TGCA | 5 cut(s) | 84, 233, 1414, 1612, 1887 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 659, 1343, 1609 |
| HpyF3I | CTNAG | 8 cut(s) | 380, 685, 881, 1056, 1596, 1745, 2056, 2147 |
| HpySE526I | ACGT | 4 cut(s) | 440, 579, 866, 1833 |
| HspAI | GCGC | 2 cut(s) | 1032, 1317 |
| Kpn2I | TCCGGA | 2 cut(s) | 1858, 2242 |
| Ksp22I | TGATCA | 1 cut(s) | 672 |
| KspAI | GTTAAC | 1 cut(s) | 957 |
| LmnI | GCTCC | 4 cut(s) | 694, 1382, 2049, 2245 |
| Lsp1109I | GCAGC | 4 cut(s) | 245, 325, 1168, 1816 |
| LweI | GCATC | 4 cut(s) | 488, 954, 1229, 1590 |
| MaeI | CTAG | 3 cut(s) | 1121, 1202, 2114 |
| MaeII | ACGT | 4 cut(s) | 440, 579, 866, 1833 |
| MaeIII | GTNAC | 8 cut(s) | 460, 884, 923, 997, 1591, 1625, 1784, 2080 |
| MbiI | CCGCTC | 1 cut(s) | 1371 |
| MfeI | CAATTG | 1 cut(s) | 101 |
| MflI | RGATCY | 5 cut(s) | 4, 304, 1050, 1620, 1639 |
| MhlI | GDGCHC | 3 cut(s) | 359, 1467, 2195 |
| MluCI | AATT | 9 cut(s) | 101, 212, 325, 569, 802, 1013, 1298, 1502, 2063 |
| MlyI | GAGTC | 7 cut(s) | 184, 850, 1118, 1286, 1335, 1588, 1954 |
| MmeI | TCCRAC | 4 cut(s) | 1152, 1600, 1948, 2164 |
| MroI | TCCGGA | 2 cut(s) | 1858, 2242 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1775, 2328 |
| MspI | CCGG | 5 cut(s) | 372, 911, 1794, 1859, 2243 |
| MunI | CAATTG | 1 cut(s) | 101 |
| Mva1269I | GAATGC | 1 cut(s) | 84 |
| MvnI | CGCG | 4 cut(s) | 953, 1341, 1838, 1898 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 659, 1343, 1609 |
| NcoI | CCATGG | 1 cut(s) | 692 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 142, 710, 1384, 1510 |
| NmeAIII | GCCGAG | 1 cut(s) | 1340 |
| NmuCI | GTSAC | 1 cut(s) | 1591 |
| NruI | TCGCGA | 2 cut(s) | 1838, 1898 |
| NspI | RCATGY | 1 cut(s) | 528 |
| PagI | TCATGA | 3 cut(s) | 315, 1165, 1459 |
| PciI | ACATGT | 1 cut(s) | 524 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 792, 1512, 1544 |
| PctI | GAATGC | 1 cut(s) | 84 |
| PkrI | GCNGC | 6 cut(s) | 131, 235, 340, 1183, 1806, 1809 |
| PleI | GAGTC | 7 cut(s) | 183, 850, 1118, 1285, 1334, 1588, 1954 |
| PpsI | GAGTC | 7 cut(s) | 183, 850, 1118, 1285, 1334, 1588, 1954 |
| PscI | ACATGT | 1 cut(s) | 524 |
| Psp124BI | GAGCTC | 1 cut(s) | 359 |
| Psp1406I | AACGTT | 1 cut(s) | 866 |
| PspFI | CCCAGC | 2 cut(s) | 161, 1007 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 142, 710, 1384, 1510 |
| PspPI | GGNCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1197, 1229, 2292, 2324 |
| PsuI | RGATCY | 5 cut(s) | 4, 304, 1050, 1620, 1639 |
| RruI | TCGCGA | 2 cut(s) | 1838, 1898 |
| RsaI | GTAC | 4 cut(s) | 725, 1043, 1422, 1827 |
| RsaNI | GTAC | 4 cut(s) | 724, 1042, 1421, 1826 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1775, 2328 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1754 |
| RsrII | CGGWCCG | 1 cut(s) | 1754 |
| SacI | GAGCTC | 1 cut(s) | 359 |
| SatI | GCNGC | 6 cut(s) | 130, 234, 339, 1182, 1805, 1808 |
| Sau96I | GGNCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| SchI | GAGTC | 7 cut(s) | 184, 850, 1118, 1286, 1335, 1588, 1954 |
| SduI | GDGCHC | 3 cut(s) | 359, 1467, 2195 |
| SfaNI | GCATC | 4 cut(s) | 488, 954, 1229, 1590 |
| SinI | GGWCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1775, 2328 |
| SmlI | CTYRAG | 5 cut(s) | 30, 190, 352, 1274, 1366 |
| SmoI | CTYRAG | 5 cut(s) | 30, 190, 352, 1274, 1366 |
| Sse9I | AATT | 9 cut(s) | 101, 212, 325, 569, 802, 1013, 1298, 1502, 2063 |
| SsiI | CCGC | 6 cut(s) | 129, 341, 1341, 1371, 1808, 2129 |
| SspI | AATATT | 2 cut(s) | 669, 1064 |
| SspMI | CTAG | 3 cut(s) | 1121, 1202, 2114 |
| SstI | GAGCTC | 1 cut(s) | 359 |
| StyI | CCWWGG | 1 cut(s) | 692 |
| TaiI | ACGT | 4 cut(s) | 443, 582, 869, 1836 |
| TaqI | TCGA | 5 cut(s) | 567, 786, 1538, 1645, 1689 |
| TaqII | GACCGA | 2 cut(s) | 281, 1097 |
| TasI | AATT | 9 cut(s) | 101, 212, 325, 569, 802, 1013, 1298, 1502, 2063 |
| TatI | WGTACW | 1 cut(s) | 1825 |
| TauI | GCSGC | 2 cut(s) | 132, 1810 |
| TscAI | CASTG | 1 cut(s) | 2178 |
| TseFI | GTSAC | 1 cut(s) | 1591 |
| TseI | GCWGC | 4 cut(s) | 233, 338, 1181, 1804 |
| Tsp45I | GTSAC | 1 cut(s) | 1591 |
| TspGWI | ACGGA | 6 cut(s) | 283, 485, 1319, 1383, 1656, 1746 |
| TspRI | CASTG | 1 cut(s) | 2178 |
| VpaK11BI | GGWCC | 7 cut(s) | 140, 1152, 1509, 1754, 1780, 1856, 2126 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 731 |
| XapI | RAATTY | 6 cut(s) | 212, 325, 802, 1013, 1502, 2063 |
| XbaI | TCTAGA | 1 cut(s) | 1120 |
| XceI | RCATGY | 1 cut(s) | 528 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 158, 1688 |
| XspI | CTAG | 3 cut(s) | 1121, 1202, 2114 |