ATP-dependent zinc metalloprotease FTSH 12
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79560 AT1G79560 AT1G79560 |
| fragaria_vesca | FvH4_3g14760 FvH4_3g14760 FvH4_3g14760 FvH4_3g14760 |
| malus_domestica | MD05G1229800.v1.1 |
| prunus_persica | Prupe.4G132700_v2.0.a1 |
| pyrus_communis | pycom05g21070 |
| rosa_chinensis | RchiOBHm_Chr5g0024281 |
| rosa_laevigata | RLG00000032790 |
| rosa_multiflora | Rmu_sc0002344.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00054900 Rroxscaffold_1G00055780 |
| rosa_rugosa | Rorug05G0083000 |
| rosa_samantha | Rh5AG173500 Rh5CG186500 Rh5DG173000 |
| rosa_wichuraiana | Rw0G000870 Rw5G015670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1340 |
| Acc16I | TGCGCA | 1 cut(s) | 1848 |
| AccB1I | GGYRCC | 1 cut(s) | 230 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 599, 829 |
| AccBSI | CCGCTC | 1 cut(s) | 238 |
| AccI | GTMKAC | 3 cut(s) | 1795, 2430, 2441 |
| AccII | CGCG | 3 cut(s) | 993, 1630, 1739 |
| AccIII | TCCGGA | 1 cut(s) | 2118 |
| AciI | CCGC | 8 cut(s) | 32, 96, 238, 871, 941, 1494, 1679, 2138 |
| AclWI | GGATC | 9 cut(s) | 577, 766, 1208, 1266, 1273, 1515, 1805, 2898, 2979 |
| AcoI | YGGCCR | 1 cut(s) | 1966 |
| AcsI | RAATTY | 2 cut(s) | 959, 1429 |
| AcuI | CTGAAG | 3 cut(s) | 1082, 1250, 2796 |
| AcvI | CACGTG | 1 cut(s) | 2417 |
| AfaI | GTAC | 2 cut(s) | 1488, 2232 |
| AfeI | AGCGCT | 1 cut(s) | 1379 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 599, 829, 1610 |
| AflIII | ACRYGT | 1 cut(s) | 2503 |
| AgeI | ACCGGT | 1 cut(s) | 2682 |
| AgsI | TTSAA | 7 cut(s) | 61, 619, 658, 677, 959, 1734, 1835 |
| AjnI | CCWGG | 6 cut(s) | 598, 887, 1603, 2377, 2547, 2570 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 987, 1019 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2149, 2181 |
| Alw21I | GWGCWC | 2 cut(s) | 348, 1039 |
| Alw44I | GTGCAC | 1 cut(s) | 344 |
| AlwI | GGATC | 9 cut(s) | 577, 766, 1208, 1266, 1273, 1515, 1805, 2898, 2979 |
| Ama87I | CYCGRG | 4 cut(s) | 327, 531, 587, 2216 |
| Aor13HI | TCCGGA | 1 cut(s) | 2118 |
| Aor51HI | AGCGCT | 1 cut(s) | 1379 |
| AoxI | GGCC | 2 cut(s) | 352, 1966 |
| ApaLI | GTGCAC | 1 cut(s) | 344 |
| ApeKI | GCWGC | 5 cut(s) | 461, 1124, 1709, 2368, 3005 |
| ApoI | RAATTY | 2 cut(s) | 959, 1429 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 376, 408, 1937, 1969 |
| AsiGI | ACCGGT | 1 cut(s) | 2682 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1298, 2927 |
| AspLEI | GCGC | 6 cut(s) | 487, 682, 1380, 1630, 1849, 3010 |
| AspS9I | GGNCC | 3 cut(s) | 352, 1598, 2689 |
| AsuC2I | CCSGG | 3 cut(s) | 121, 1317, 2107 |
| AsuHPI | GGTGA | 6 cut(s) | 214, 854, 1508, 2593, 2734, 2821 |
| AsuII | TTCGAA | 1 cut(s) | 2089 |
| AvaI | CYCGRG | 4 cut(s) | 327, 531, 587, 2216 |
| AvaII | GGWCC | 2 cut(s) | 1598, 2689 |
| BaeGI | GKGCMC | 1 cut(s) | 348 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2382, 2415 |
| BanI | GGYRCC | 1 cut(s) | 230 |
| BanII | GRGCYC | 1 cut(s) | 1039 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 154, 186 |
| BauI | CACGAG | 1 cut(s) | 359 |
| BbrPI | CACGTG | 1 cut(s) | 2417 |
| BbsI | GAAGAC | 6 cut(s) | 162, 275, 980, 1149, 1877, 2427 |
| Bbv12I | GWGCWC | 2 cut(s) | 348, 1039 |
| BbvCI | CCTCAGC | 1 cut(s) | 937 |
| BbvI | GCAGC | 5 cut(s) | 448, 1136, 1696, 2380, 2992 |
| BceAI | ACGGC | 2 cut(s) | 1953, 2680 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2700, 2734 |
| BciT130I | CCWGG | 6 cut(s) | 600, 889, 1605, 2379, 2549, 2572 |
| BciVI | GTATCC | 2 cut(s) | 1314, 2740 |
| BcnI | CCSGG | 3 cut(s) | 121, 1317, 2107 |
| BfaI | CTAG | 7 cut(s) | 743, 789, 1032, 1187, 1490, 1803, 3025 |
| BfoI | RGCGCY | 2 cut(s) | 683, 1381 |
| BfuI | GTATCC | 2 cut(s) | 1314, 2740 |
| BglII | AGATCT | 1 cut(s) | 826 |
| BisI | GCNGC | 7 cut(s) | 462, 942, 1125, 1710, 2139, 2369, 3006 |
| BlsI | GCNGC | 7 cut(s) | 463, 943, 1126, 1711, 2140, 2370, 3007 |
| Bme1390I | CCNGG | 9 cut(s) | 121, 600, 889, 1317, 1605, 2107, 2379, 2549, 2572 |
| Bme18I | GGWCC | 2 cut(s) | 1598, 2689 |
| BmeT110I | CYCGRG | 4 cut(s) | 327, 531, 587, 2216 |
| BmgT120I | GGNCC | 3 cut(s) | 352, 1598, 2689 |
| BmiI | GGNNCC | 3 cut(s) | 232, 1541, 2690 |
| BmrFI | CCNGG | 9 cut(s) | 121, 600, 889, 1317, 1605, 2107, 2379, 2549, 2572 |
| BmrI | ACTGGG | 1 cut(s) | 119 |
| BmsI | GCATC | 3 cut(s) | 1679, 1771, 1993 |
| BmuI | ACTGGG | 1 cut(s) | 119 |
| BpiI | GAAGAC | 6 cut(s) | 162, 275, 980, 1149, 1877, 2427 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 196, 228 |
| BpmI | CTGGAG | 1 cut(s) | 2570 |
| Bpu10I | CCTNAGC | 2 cut(s) | 937, 1074 |
| Bpu14I | TTCGAA | 1 cut(s) | 2089 |
| BpuEI | CTTGAG | 2 cut(s) | 749, 1970 |
| BpuMI | CCSGG | 3 cut(s) | 121, 1317, 2107 |
| Bsa29I | ATCGAT | 1 cut(s) | 1881 |
| BsaAI | YACGTR | 2 cut(s) | 2417, 3002 |
| BsaBI | GATNNNNATC | 2 cut(s) | 738, 1913 |
| BsaI | GGTCTC | 2 cut(s) | 740, 2615 |
| BsaJI | CCNNGG | 7 cut(s) | 226, 530, 1316, 1814, 2106, 2434, 2571 |
| BsaWI | WCCGGW | 2 cut(s) | 2118, 2682 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 249, 279, 843, 873, 1239, 1269 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 599, 829, 1610 |
| Bse118I | RCCGGY | 2 cut(s) | 1441, 2682 |
| Bse1I | ACTGG | 5 cut(s) | 114, 1615, 2357, 2866, 2990 |
| Bse3DI | GCAATG | 1 cut(s) | 1302 |
| Bse8I | GATNNNNATC | 2 cut(s) | 738, 1913 |
| BseAI | TCCGGA | 1 cut(s) | 2118 |
| BseBI | CCWGG | 6 cut(s) | 600, 889, 1605, 2379, 2549, 2572 |
| BseCI | ATCGAT | 1 cut(s) | 1881 |
| BseDI | CCNNGG | 7 cut(s) | 226, 530, 1316, 1814, 2106, 2434, 2571 |
| BseGI | GGATG | 5 cut(s) | 519, 739, 1370, 1777, 2692 |
| BseJI | GATNNNNATC | 2 cut(s) | 738, 1913 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 599, 829, 1610 |
| BseMI | GCAATG | 1 cut(s) | 1302 |
| BseMII | CTCAG | 6 cut(s) | 65, 227, 951, 1014, 1107, 2789 |
| BseNI | ACTGG | 5 cut(s) | 114, 1615, 2357, 2866, 2990 |
| BseRI | GAGGAG | 4 cut(s) | 519, 925, 2783, 2966 |
| BseSI | GKGCMC | 1 cut(s) | 348 |
| BseXI | GCAGC | 5 cut(s) | 448, 1136, 1696, 2380, 2992 |
| BseYI | CCCAGC | 1 cut(s) | 2042 |
| Bsh1236I | CGCG | 3 cut(s) | 993, 1630, 1739 |
| BshFI | GGCC | 2 cut(s) | 354, 1968 |
| BshNI | GGYRCC | 1 cut(s) | 230 |
| BshTI | ACCGGT | 1 cut(s) | 2682 |
| BshVI | ATCGAT | 1 cut(s) | 1881 |
| BsiHKAI | GWGCWC | 2 cut(s) | 348, 1039 |
| BsiHKCI | CYCGRG | 4 cut(s) | 327, 531, 587, 2216 |
| BsiSI | CCGG | 7 cut(s) | 121, 1245, 1316, 1442, 2106, 2119, 2683 |
| BslFI | GGGAC | 3 cut(s) | 458, 2175, 2702 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 599, 829, 1610 |
| BsmBI | CGTCTC | 1 cut(s) | 1735 |
| BsmFI | GGGAC | 3 cut(s) | 458, 2175, 2702 |
| BsmI | GAATGC | 1 cut(s) | 2797 |
| BsnI | GGCC | 2 cut(s) | 354, 1968 |
| Bso31I | GGTCTC | 2 cut(s) | 740, 2615 |
| BsoBI | CYCGRG | 4 cut(s) | 327, 531, 587, 2216 |
| Bsp119I | TTCGAA | 1 cut(s) | 2089 |
| Bsp1286I | GDGCHC | 2 cut(s) | 348, 1039 |
| Bsp13I | TCCGGA | 1 cut(s) | 2118 |
| Bsp68I | TCGCGA | 2 cut(s) | 993, 1739 |
| BspACI | CCGC | 8 cut(s) | 32, 96, 238, 871, 941, 1494, 1679, 2138 |
| BspANI | GGCC | 2 cut(s) | 354, 1968 |
| BspCNI | CTCAG | 6 cut(s) | 64, 226, 950, 1015, 1108, 2790 |
| BspDI | ATCGAT | 1 cut(s) | 1881 |
| BspEI | TCCGGA | 1 cut(s) | 2118 |
| BspFNI | CGCG | 3 cut(s) | 993, 1630, 1739 |
| BspHI | TCATGA | 2 cut(s) | 1290, 2305 |
| BspLI | GGNNCC | 3 cut(s) | 232, 1541, 2690 |
| BspPI | GGATC | 9 cut(s) | 577, 766, 1208, 1266, 1273, 1515, 1805, 2898, 2979 |
| BspQI | GCTCTTC | 2 cut(s) | 1816, 2241 |
| BspT104I | TTCGAA | 1 cut(s) | 2089 |
| BspT107I | GGYRCC | 1 cut(s) | 230 |
| BspTNI | GGTCTC | 2 cut(s) | 740, 2615 |
| BsrBI | CCGCTC | 1 cut(s) | 238 |
| BsrDI | GCAATG | 1 cut(s) | 1302 |
| BsrFI | RCCGGY | 2 cut(s) | 1441, 2682 |
| BsrI | ACTGG | 5 cut(s) | 114, 1615, 2357, 2866, 2990 |
| BssAI | RCCGGY | 2 cut(s) | 1441, 2682 |
| BssECI | CCNNGG | 7 cut(s) | 226, 530, 1316, 1814, 2106, 2434, 2571 |
| BssNAI | GTATAC | 1 cut(s) | 2442 |
| BssSI | CACGAG | 1 cut(s) | 359 |
| BssT1I | CCWWGG | 2 cut(s) | 226, 2434 |
| Bst1107I | GTATAC | 1 cut(s) | 2442 |
| Bst2BI | CACGAG | 1 cut(s) | 359 |
| Bst2UI | CCWGG | 6 cut(s) | 600, 889, 1605, 2379, 2549, 2572 |
| Bst4CI | ACNGT | 8 cut(s) | 388, 449, 857, 927, 1694, 1979, 2039, 2095 |
| Bst6I | CTCTTC | 7 cut(s) | 46, 544, 1265, 1816, 2241, 2282, 2871 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1676, 2017 |
| BstBAI | YACGTR | 2 cut(s) | 2417, 3002 |
| BstBI | TTCGAA | 1 cut(s) | 2089 |
| BstC8I | GCNNGC | 4 cut(s) | 882, 2358, 2669, 2709 |
| BstDEI | CTNAG | 9 cut(s) | 51, 213, 818, 937, 1023, 1074, 1116, 1210, 2798 |
| BstDSI | CCRYGG | 1 cut(s) | 1814 |
| BstF5I | GGATG | 5 cut(s) | 519, 739, 1370, 1777, 2692 |
| BstFNI | CGCG | 3 cut(s) | 993, 1630, 1739 |
| BstH2I | RGCGCY | 2 cut(s) | 683, 1381 |
| BstHHI | GCGC | 6 cut(s) | 487, 682, 1380, 1630, 1849, 3010 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 189, 524, 877, 1676, 1844, 2017, 2792, 2801 |
| BstNI | CCWGG | 6 cut(s) | 600, 889, 1605, 2379, 2549, 2572 |
| BstNSI | RCATGY | 2 cut(s) | 1802, 2360 |
| BstSCI | CCNGG | 9 cut(s) | 119, 598, 887, 1315, 1603, 2105, 2377, 2547, 2570 |
| BstSLI | GKGCMC | 1 cut(s) | 348 |
| BstUI | CGCG | 3 cut(s) | 993, 1630, 1739 |
| BstV1I | GCAGC | 5 cut(s) | 448, 1136, 1696, 2380, 2992 |
| BstV2I | GAAGAC | 6 cut(s) | 162, 275, 980, 1149, 1877, 2427 |
| BstX2I | RGATCY | 8 cut(s) | 758, 826, 1213, 1258, 1278, 1507, 1810, 2890 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2578 |
| BstYI | RGATCY | 8 cut(s) | 758, 826, 1213, 1258, 1278, 1507, 1810, 2890 |
| BstZ17I | GTATAC | 1 cut(s) | 2442 |
| Bsu15I | ATCGAT | 1 cut(s) | 1881 |
| BsuI | GTATCC | 2 cut(s) | 1314, 2740 |
| BsuRI | GGCC | 2 cut(s) | 354, 1968 |
| BsuTUI | ATCGAT | 1 cut(s) | 1881 |
| BtgI | CCRYGG | 1 cut(s) | 1814 |
| BtgZI | GCGATG | 2 cut(s) | 198, 2801 |
| BtsCI | GGATG | 5 cut(s) | 519, 739, 1370, 1777, 2692 |
| BtsIMutI | CAGTG | 6 cut(s) | 393, 862, 1462, 1699, 2044, 2526 |
| BtuMI | TCGCGA | 2 cut(s) | 993, 1739 |
| Cac8I | GCNNGC | 4 cut(s) | 882, 2358, 2669, 2709 |
| CciI | TCATGA | 2 cut(s) | 1290, 2305 |
| CfoI | GCGC | 6 cut(s) | 487, 682, 1380, 1630, 1849, 3010 |
| Cfr10I | RCCGGY | 2 cut(s) | 1441, 2682 |
| Cfr13I | GGNCC | 3 cut(s) | 352, 1598, 2689 |
| ClaI | ATCGAT | 1 cut(s) | 1881 |
| CseI | GACGC | 2 cut(s) | 138, 2499 |
| Csp6I | GTAC | 2 cut(s) | 1487, 2231 |
| CspAI | ACCGGT | 1 cut(s) | 2682 |
| CviQI | GTAC | 2 cut(s) | 1487, 2231 |
| DdeI | CTNAG | 9 cut(s) | 51, 213, 818, 937, 1023, 1074, 1116, 1210, 2798 |
| EaeI | YGGCCR | 1 cut(s) | 1966 |
| Eam1104I | CTCTTC | 7 cut(s) | 46, 544, 1265, 1816, 2241, 2282, 2871 |
| EarI | CTCTTC | 7 cut(s) | 46, 544, 1265, 1816, 2241, 2282, 2871 |
| Ecl136II | GAGCTC | 1 cut(s) | 1037 |
| Eco130I | CCWWGG | 2 cut(s) | 226, 2434 |
| Eco24I | GRGCYC | 1 cut(s) | 1039 |
| Eco31I | GGTCTC | 2 cut(s) | 740, 2615 |
| Eco32I | GATATC | 3 cut(s) | 1047, 1067, 2116 |
| Eco47I | GGWCC | 2 cut(s) | 1598, 2689 |
| Eco47III | AGCGCT | 1 cut(s) | 1379 |
| Eco53kI | GAGCTC | 1 cut(s) | 1037 |
| Eco57I | CTGAAG | 3 cut(s) | 1082, 1250, 2796 |
| Eco72I | CACGTG | 1 cut(s) | 2417 |
| Eco88I | CYCGRG | 4 cut(s) | 327, 531, 587, 2216 |
| EcoICRI | GAGCTC | 1 cut(s) | 1037 |
| EcoRII | CCWGG | 6 cut(s) | 598, 887, 1603, 2377, 2547, 2570 |
| EcoRV | GATATC | 3 cut(s) | 1047, 1067, 2116 |
| EcoT14I | CCWWGG | 2 cut(s) | 226, 2434 |
| EcoT22I | ATGCAT | 1 cut(s) | 2362 |
| EcoT38I | GRGCYC | 1 cut(s) | 1039 |
| ErhI | CCWWGG | 2 cut(s) | 226, 2434 |
| Esp3I | CGTCTC | 1 cut(s) | 1735 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1813, 1845, 2260, 2292 |
| FaqI | GGGAC | 3 cut(s) | 458, 2175, 2702 |
| FauI | CCCGC | 2 cut(s) | 103, 864 |
| FblI | GTMKAC | 3 cut(s) | 1795, 2430, 2441 |
| Fnu4HI | GCNGC | 7 cut(s) | 462, 942, 1125, 1710, 2139, 2369, 3006 |
| FokI | GGATG | 5 cut(s) | 506, 746, 1357, 1784, 2679 |
| FriOI | GRGCYC | 1 cut(s) | 1039 |
| Fsp4HI | GCNGC | 7 cut(s) | 462, 942, 1125, 1710, 2139, 2369, 3006 |
| FspBI | CTAG | 7 cut(s) | 743, 789, 1032, 1187, 1490, 1803, 3025 |
| FspI | TGCGCA | 1 cut(s) | 1848 |
| GlaI | GCGC | 6 cut(s) | 486, 681, 1379, 1629, 1848, 3009 |
| GluI | GCNGC | 7 cut(s) | 462, 942, 1125, 1710, 2139, 2369, 3006 |
| GsaI | CCCAGC | 1 cut(s) | 2046 |
| GsuI | CTGGAG | 1 cut(s) | 2570 |
| HaeII | RGCGCY | 2 cut(s) | 683, 1381 |
| HaeIII | GGCC | 2 cut(s) | 354, 1968 |
| HapII | CCGG | 7 cut(s) | 121, 1245, 1316, 1442, 2106, 2119, 2683 |
| HgaI | GACGC | 2 cut(s) | 138, 2499 |
| HhaI | GCGC | 6 cut(s) | 487, 682, 1380, 1630, 1849, 3010 |
| Hin6I | GCGC | 6 cut(s) | 485, 680, 1378, 1628, 1847, 3008 |
| HinP1I | GCGC | 6 cut(s) | 485, 680, 1378, 1628, 1847, 3008 |
| HincII | GTYRAC | 4 cut(s) | 558, 1201, 2131, 2754 |
| HindII | GTYRAC | 4 cut(s) | 558, 1201, 2131, 2754 |
| HindIII | AAGCTT | 4 cut(s) | 1076, 1103, 1836, 2078 |
| HpaI | GTTAAC | 2 cut(s) | 558, 2131 |
| HpaII | CCGG | 7 cut(s) | 121, 1245, 1316, 1442, 2106, 2119, 2683 |
| HphI | GGTGA | 6 cut(s) | 214, 854, 1508, 2593, 2734, 2821 |
| Hpy99I | CGWCG | 1 cut(s) | 1983 |
| HpyAV | CCTTC | 9 cut(s) | 402, 421, 886, 1002, 1106, 1169, 2152, 2384, 2881 |
| HpyCH4III | ACNGT | 8 cut(s) | 388, 449, 857, 927, 1694, 1979, 2039, 2095 |
| HpyCH4IV | ACGT | 5 cut(s) | 2164, 2416, 2447, 2503, 3001 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 189, 524, 877, 1676, 1844, 2017, 2792, 2801 |
| HpyF3I | CTNAG | 9 cut(s) | 51, 213, 818, 937, 1023, 1074, 1116, 1210, 2798 |
| HpySE526I | ACGT | 5 cut(s) | 2164, 2416, 2447, 2503, 3001 |
| HspAI | GCGC | 6 cut(s) | 485, 680, 1378, 1628, 1847, 3008 |
| Kpn2I | TCCGGA | 1 cut(s) | 2118 |
| KspAI | GTTAAC | 2 cut(s) | 558, 2131 |
| LguI | GCTCTTC | 2 cut(s) | 1816, 2241 |
| LmnI | GCTCC | 5 cut(s) | 113, 418, 532, 2376, 2953 |
| Lsp1109I | GCAGC | 5 cut(s) | 448, 1136, 1696, 2380, 2992 |
| LweI | GCATC | 3 cut(s) | 1679, 1771, 1993 |
| MaeI | CTAG | 7 cut(s) | 743, 789, 1032, 1187, 1490, 1803, 3025 |
| MaeII | ACGT | 5 cut(s) | 2164, 2416, 2447, 2503, 3001 |
| MaeIII | GTNAC | 3 cut(s) | 489, 1162, 2524 |
| MbiI | CCGCTC | 1 cut(s) | 238 |
| MfeI | CAATTG | 1 cut(s) | 2210 |
| MflI | RGATCY | 8 cut(s) | 758, 826, 1213, 1258, 1278, 1507, 1810, 2890 |
| MhlI | GDGCHC | 2 cut(s) | 348, 1039 |
| MlyI | GAGTC | 5 cut(s) | 43, 150, 281, 361, 572 |
| MmeI | TCCRAC | 2 cut(s) | 697, 1426 |
| Mph1103I | ATGCAT | 1 cut(s) | 2362 |
| MroI | TCCGGA | 1 cut(s) | 2118 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1298, 2927 |
| MseI | TTAA | 9 cut(s) | 333, 375, 557, 662, 929, 1841, 2130, 2825, 2903 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2697 |
| MspA1I | CMGCKG | 3 cut(s) | 941, 1127, 1405 |
| MspI | CCGG | 7 cut(s) | 121, 1245, 1316, 1442, 2106, 2119, 2683 |
| MspR9I | CCNGG | 9 cut(s) | 121, 600, 889, 1317, 1605, 2107, 2379, 2549, 2572 |
| MunI | CAATTG | 1 cut(s) | 2210 |
| Mva1269I | GAATGC | 1 cut(s) | 2797 |
| MvaI | CCWGG | 6 cut(s) | 600, 889, 1605, 2379, 2549, 2572 |
| MvnI | CGCG | 3 cut(s) | 993, 1630, 1739 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 189, 524, 877, 1676, 1844, 2017, 2792, 2801 |
| NciI | CCSGG | 3 cut(s) | 121, 1317, 2107 |
| NlaIV | GGNNCC | 3 cut(s) | 232, 1541, 2690 |
| NmeAIII | GCCGAG | 1 cut(s) | 259 |
| NmuCI | GTSAC | 2 cut(s) | 1162, 2524 |
| NruI | TCGCGA | 2 cut(s) | 993, 1739 |
| NsbI | TGCGCA | 1 cut(s) | 1848 |
| NsiI | ATGCAT | 1 cut(s) | 2362 |
| NspI | RCATGY | 2 cut(s) | 1802, 2360 |
| NspV | TTCGAA | 1 cut(s) | 2089 |
| PaeI | GCATGC | 1 cut(s) | 2360 |
| PaeR7I | CTCGAG | 2 cut(s) | 327, 2216 |
| PagI | TCATGA | 2 cut(s) | 1290, 2305 |
| PciSI | GCTCTTC | 2 cut(s) | 1816, 2241 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 23, 538 |
| PctI | GAATGC | 1 cut(s) | 2797 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1298, 2927 |
| PfeI | GAWTC | 6 cut(s) | 28, 260, 793, 1109, 1346, 2122 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 599, 829 |
| PfoI | TCCNGGA | 2 cut(s) | 598, 1603 |
| PinAI | ACCGGT | 1 cut(s) | 2682 |
| PkrI | GCNGC | 7 cut(s) | 463, 943, 1126, 1711, 2140, 2370, 3007 |
| PleI | GAGTC | 5 cut(s) | 43, 149, 281, 361, 571 |
| PmaCI | CACGTG | 1 cut(s) | 2417 |
| PmlI | CACGTG | 1 cut(s) | 2417 |
| PpsI | GAGTC | 5 cut(s) | 43, 149, 281, 361, 571 |
| Ppu21I | YACGTR | 2 cut(s) | 2417, 3002 |
| PsiI | TTATAA | 1 cut(s) | 1340 |
| Psp124BI | GAGCTC | 1 cut(s) | 1039 |
| Psp6I | CCWGG | 6 cut(s) | 598, 887, 1603, 2377, 2547, 2570 |
| PspCI | CACGTG | 1 cut(s) | 2417 |
| PspFI | CCCAGC | 1 cut(s) | 2042 |
| PspGI | CCWGG | 6 cut(s) | 598, 887, 1603, 2377, 2547, 2570 |
| PspN4I | GGNNCC | 3 cut(s) | 232, 1541, 2690 |
| PspPI | GGNCC | 3 cut(s) | 352, 1598, 2689 |
| PspXI | VCTCGAGB | 2 cut(s) | 327, 2216 |
| PsuI | RGATCY | 8 cut(s) | 758, 826, 1213, 1258, 1278, 1507, 1810, 2890 |
| PvuII | CAGCTG | 2 cut(s) | 1127, 1405 |
| RruI | TCGCGA | 2 cut(s) | 993, 1739 |
| RsaI | GTAC | 2 cut(s) | 1488, 2232 |
| RsaNI | GTAC | 2 cut(s) | 1487, 2231 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2697 |
| SacI | GAGCTC | 1 cut(s) | 1039 |
| SapI | GCTCTTC | 2 cut(s) | 1816, 2241 |
| SaqAI | TTAA | 9 cut(s) | 333, 375, 557, 662, 929, 1841, 2130, 2825, 2903 |
| SatI | GCNGC | 7 cut(s) | 462, 942, 1125, 1710, 2139, 2369, 3006 |
| Sau96I | GGNCC | 3 cut(s) | 352, 1598, 2689 |
| SchI | GAGTC | 5 cut(s) | 43, 150, 281, 361, 572 |
| ScrFI | CCNGG | 9 cut(s) | 121, 600, 889, 1317, 1605, 2107, 2379, 2549, 2572 |
| SduI | GDGCHC | 2 cut(s) | 348, 1039 |
| SfaNI | GCATC | 3 cut(s) | 1679, 1771, 1993 |
| Sfr274I | CTCGAG | 2 cut(s) | 327, 2216 |
| SfuI | TTCGAA | 1 cut(s) | 2089 |
| SinI | GGWCC | 2 cut(s) | 1598, 2689 |
| SlaI | CTCGAG | 2 cut(s) | 327, 2216 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2697 |
| SmlI | CTYRAG | 4 cut(s) | 327, 764, 1949, 2216 |
| SmoI | CTYRAG | 4 cut(s) | 327, 764, 1949, 2216 |
| SphI | GCATGC | 1 cut(s) | 2360 |
| SsiI | CCGC | 8 cut(s) | 32, 96, 238, 871, 941, 1494, 1679, 2138 |
| SspI | AATATT | 1 cut(s) | 2025 |
| SspMI | CTAG | 7 cut(s) | 743, 789, 1032, 1187, 1490, 1803, 3025 |
| SstI | GAGCTC | 1 cut(s) | 1039 |
| StyD4I | CCNGG | 9 cut(s) | 119, 598, 887, 1315, 1603, 2105, 2377, 2547, 2570 |
| StyI | CCWWGG | 2 cut(s) | 226, 2434 |
| TaaI | ACNGT | 8 cut(s) | 388, 449, 857, 927, 1694, 1979, 2039, 2095 |
| TaiI | ACGT | 5 cut(s) | 2167, 2419, 2450, 2506, 3004 |
| TatI | WGTACW | 1 cut(s) | 2230 |
| TauI | GCSGC | 2 cut(s) | 944, 2141 |
| TfiI | GAWTC | 6 cut(s) | 28, 260, 793, 1109, 1346, 2122 |
| Tru1I | TTAA | 9 cut(s) | 333, 375, 557, 662, 929, 1841, 2130, 2825, 2903 |
| Tru9I | TTAA | 9 cut(s) | 333, 375, 557, 662, 929, 1841, 2130, 2825, 2903 |
| TscAI | CASTG | 6 cut(s) | 393, 862, 1462, 1699, 2044, 2533 |
| TseFI | GTSAC | 2 cut(s) | 1162, 2524 |
| TseI | GCWGC | 5 cut(s) | 461, 1124, 1709, 2368, 3005 |
| Tsp45I | GTSAC | 2 cut(s) | 1162, 2524 |
| TspGWI | ACGGA | 4 cut(s) | 1154, 1831, 1949, 2889 |
| TspRI | CASTG | 6 cut(s) | 393, 862, 1462, 1699, 2044, 2533 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 599, 829 |
| VneI | GTGCAC | 1 cut(s) | 344 |
| VpaK11BI | GGWCC | 2 cut(s) | 1598, 2689 |
| XapI | RAATTY | 2 cut(s) | 959, 1429 |
| XbaI | TCTAGA | 2 cut(s) | 742, 1186 |
| XceI | RCATGY | 2 cut(s) | 1802, 2360 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 106 |
| XhoI | CTCGAG | 2 cut(s) | 327, 2216 |
| XmiI | GTMKAC | 3 cut(s) | 1795, 2430, 2441 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1298, 2927 |
| XspI | CTAG | 7 cut(s) | 743, 789, 1032, 1187, 1490, 1803, 3025 |
| Zsp2I | ATGCAT | 1 cut(s) | 2362 |