ATP-dependent zinc metalloprotease FTSH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79560 AT1G79560 AT1G79560 |
| fragaria_vesca | FvH4_3g14760 FvH4_3g14760 FvH4_3g14760 FvH4_3g14760 |
| malus_domestica | MD05G1229800.v1.1 |
| prunus_persica | Prupe.4G132700_v2.0.a1 |
| pyrus_communis | pycom05g21070 |
| rosa_chinensis | RchiOBHm_Chr5g0024281 |
| rosa_laevigata | RLG00000032790 |
| rosa_multiflora | Rmu_sc0002344.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00054900 Rroxscaffold_1G00055780 |
| rosa_rugosa | Rorug05G0083000 |
| rosa_samantha | Rh5AG173500 Rh5CG186500 Rh5DG173000 |
| rosa_wichuraiana | Rw0G000870 Rw5G015670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 373, 1297 |
| AccI | GTMKAC | 3 cut(s) | 1966, 2052, 2415 |
| AccII | CGCG | 2 cut(s) | 213, 1329 |
| AciI | CCGC | 4 cut(s) | 213, 734, 1635, 2975 |
| AclI | AACGTT | 1 cut(s) | 406 |
| AclWI | GGATC | 5 cut(s) | 1258, 1500, 1790, 1803, 2637 |
| AcsI | RAATTY | 9 cut(s) | 114, 157, 235, 925, 944, 1414, 1937, 2007, 2581 |
| AcuI | CTGAAG | 2 cut(s) | 1257, 2247 |
| AfaI | GTAC | 4 cut(s) | 2004, 2077, 2217, 2747 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1595, 1725, 2815 |
| AflII | CTTAAG | 1 cut(s) | 866 |
| AjnI | CCWGG | 4 cut(s) | 1300, 1588, 1948, 2362 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 797, 829 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 666, 698 |
| Alw21I | GWGCWC | 3 cut(s) | 514, 1509, 2022 |
| Alw26I | GTCTC | 1 cut(s) | 998 |
| Alw44I | GTGCAC | 1 cut(s) | 2018 |
| AlwI | GGATC | 5 cut(s) | 1258, 1500, 1790, 1803, 2637 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2359 |
| Ama87I | CYCGRG | 4 cut(s) | 572, 2400, 2556, 2730 |
| AoxI | GGCC | 2 cut(s) | 637, 1916 |
| ApaLI | GTGCAC | 1 cut(s) | 2018 |
| ApeKI | GCWGC | 5 cut(s) | 446, 1109, 1694, 2123, 2236 |
| ApoI | RAATTY | 9 cut(s) | 114, 157, 235, 925, 944, 1414, 1937, 2007, 2581 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1442, 1474, 1922, 1954 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1941 |
| AspLEI | GCGC | 2 cut(s) | 213, 1260 |
| AspS9I | GGNCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| AsuC2I | CCSGG | 1 cut(s) | 1565 |
| AsuHPI | GGTGA | 8 cut(s) | 49, 199, 254, 262, 311, 839, 1493, 2513 |
| AvaI | CYCGRG | 4 cut(s) | 572, 2400, 2556, 2730 |
| AvaII | GGWCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| AxyI | CCTNAGG | 1 cut(s) | 738 |
| BaeGI | GKGCMC | 1 cut(s) | 2022 |
| BamHI | GGATCC | 1 cut(s) | 1795 |
| BanI | GGYRCC | 2 cut(s) | 373, 1297 |
| BanII | GRGCYC | 3 cut(s) | 514, 1024, 1509 |
| BbsI | GAAGAC | 5 cut(s) | 629, 816, 965, 2062, 2253 |
| Bbv12I | GWGCWC | 3 cut(s) | 514, 1509, 2022 |
| BbvI | GCAGC | 5 cut(s) | 433, 1096, 1681, 2135, 2248 |
| BceAI | ACGGC | 1 cut(s) | 458 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 967, 1001, 1091, 1125 |
| BciT130I | CCWGG | 4 cut(s) | 1302, 1590, 1950, 2364 |
| BciVI | GTATCC | 1 cut(s) | 1299 |
| BcnI | CCSGG | 1 cut(s) | 1565 |
| BcoDI | GTCTC | 1 cut(s) | 998 |
| BfaI | CTAG | 3 cut(s) | 1059, 1196, 1928 |
| BfoI | RGCGCY | 1 cut(s) | 1261 |
| BfrI | CTTAAG | 1 cut(s) | 866 |
| BfuI | GTATCC | 1 cut(s) | 1299 |
| BglII | AGATCT | 1 cut(s) | 2157 |
| BisI | GCNGC | 6 cut(s) | 447, 734, 1110, 1695, 2124, 2237 |
| BlpI | GCTNAGC | 3 cut(s) | 906, 1992, 2484 |
| BlsI | GCNGC | 6 cut(s) | 448, 735, 1111, 1696, 2125, 2238 |
| Bme1390I | CCNGG | 5 cut(s) | 1302, 1565, 1590, 1950, 2364 |
| Bme18I | GGWCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| BmeT110I | CYCGRG | 4 cut(s) | 572, 2400, 2556, 2730 |
| BmgT120I | GGNCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| BmiI | GGNNCC | 4 cut(s) | 375, 1299, 1797, 2108 |
| BmrFI | CCNGG | 5 cut(s) | 1302, 1565, 1590, 1950, 2364 |
| BmrI | ACTGGG | 1 cut(s) | 273 |
| BmsI | GCATC | 6 cut(s) | 271, 700, 1329, 1756, 1978, 2439 |
| BmuI | ACTGGG | 1 cut(s) | 273 |
| BpiI | GAAGAC | 5 cut(s) | 629, 816, 965, 2062, 2253 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 181, 213, 501, 533, 1205, 1237, 1720, 1752 |
| BpmI | CTGGAG | 2 cut(s) | 1251, 2868 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 906, 1992, 2484 |
| BpuEI | CTTGAG | 2 cut(s) | 1207, 2222 |
| BpuMI | CCSGG | 1 cut(s) | 1565 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1898, 2567 |
| BsaJI | CCNNGG | 7 cut(s) | 1101, 1301, 1461, 1564, 1626, 1949, 2419 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1224, 1254 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1595, 1725, 2815 |
| Bse1I | ACTGG | 6 cut(s) | 268, 1427, 1600, 1864, 2851, 2885 |
| Bse21I | CCTNAGG | 1 cut(s) | 738 |
| Bse3DI | GCAATG | 2 cut(s) | 1719, 2778 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1898, 2567 |
| BseBI | CCWGG | 4 cut(s) | 1302, 1590, 1950, 2364 |
| BseDI | CCNNGG | 7 cut(s) | 1101, 1301, 1461, 1564, 1626, 1949, 2419 |
| BseGI | GGATG | 9 cut(s) | 286, 715, 724, 988, 1053, 1762, 2533, 2680, 2941 |
| BseJI | GATNNNNATC | 2 cut(s) | 1898, 2567 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1595, 1725, 2815 |
| BseMI | GCAATG | 2 cut(s) | 1719, 2778 |
| BseNI | ACTGG | 6 cut(s) | 268, 1427, 1600, 1864, 2851, 2885 |
| BseRI | GAGGAG | 1 cut(s) | 504 |
| BseSI | GKGCMC | 1 cut(s) | 2022 |
| BseXI | GCAGC | 5 cut(s) | 433, 1096, 1681, 2135, 2248 |
| BseYI | CCCAGC | 1 cut(s) | 60 |
| BsgI | GTGCAG | 3 cut(s) | 1331, 2046, 2976 |
| Bsh1236I | CGCG | 2 cut(s) | 213, 1329 |
| BshFI | GGCC | 2 cut(s) | 639, 1918 |
| BshNI | GGYRCC | 2 cut(s) | 373, 1297 |
| BsiHKAI | GWGCWC | 3 cut(s) | 514, 1509, 2022 |
| BsiHKCI | CYCGRG | 4 cut(s) | 572, 2400, 2556, 2730 |
| BsiSI | CCGG | 1 cut(s) | 1564 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1595, 1725, 2815 |
| BsmAI | GTCTC | 1 cut(s) | 998 |
| BsmI | GAATGC | 1 cut(s) | 2149 |
| BsnI | GGCC | 2 cut(s) | 639, 1918 |
| BsoBI | CYCGRG | 4 cut(s) | 572, 2400, 2556, 2730 |
| Bsp1286I | GDGCHC | 4 cut(s) | 514, 1024, 1509, 2022 |
| Bsp143I | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 906, 1992, 2484 |
| BspACI | CCGC | 4 cut(s) | 213, 734, 1635, 2975 |
| BspANI | GGCC | 2 cut(s) | 639, 1918 |
| BspFNI | CGCG | 2 cut(s) | 213, 1329 |
| BspHI | TCATGA | 3 cut(s) | 685, 1509, 2290 |
| BspLI | GGNNCC | 4 cut(s) | 375, 1299, 1797, 2108 |
| BspPI | GGATC | 5 cut(s) | 1258, 1500, 1790, 1803, 2637 |
| BspQI | GCTCTTC | 1 cut(s) | 2226 |
| BspT107I | GGYRCC | 2 cut(s) | 373, 1297 |
| BspTI | CTTAAG | 1 cut(s) | 866 |
| BsrDI | GCAATG | 2 cut(s) | 1719, 2778 |
| BsrI | ACTGG | 6 cut(s) | 268, 1427, 1600, 1864, 2851, 2885 |
| BssECI | CCNNGG | 7 cut(s) | 1101, 1301, 1461, 1564, 1626, 1949, 2419 |
| BssMI | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| BssT1I | CCWWGG | 3 cut(s) | 1461, 1626, 2419 |
| Bst2UI | CCWGG | 4 cut(s) | 1302, 1590, 1950, 2364 |
| Bst4CI | ACNGT | 8 cut(s) | 357, 767, 971, 1964, 1971, 2024, 2080, 2943 |
| Bst6I | CTCTTC | 3 cut(s) | 602, 2226, 2925 |
| BstAFI | CTTAAG | 1 cut(s) | 866 |
| BstC8I | GCNNGC | 3 cut(s) | 1785, 2283, 2343 |
| BstF5I | GGATG | 9 cut(s) | 286, 715, 724, 988, 1053, 1762, 2533, 2680, 2941 |
| BstFNI | CGCG | 2 cut(s) | 213, 1329 |
| BstH2I | RGCGCY | 1 cut(s) | 1261 |
| BstHHI | GCGC | 2 cut(s) | 213, 1260 |
| BstKTI | GATC | 9 cut(s) | 526, 1246, 1266, 1495, 1798, 1870, 2160, 2632, 2959 |
| BstMAI | GTCTC | 1 cut(s) | 998 |
| BstMBI | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 509, 1661 |
| BstNI | CCWGG | 4 cut(s) | 1302, 1590, 1950, 2364 |
| BstNSI | RCATGY | 2 cut(s) | 1787, 2345 |
| BstSCI | CCNGG | 5 cut(s) | 1300, 1563, 1588, 1948, 2362 |
| BstSLI | GKGCMC | 1 cut(s) | 2022 |
| BstUI | CGCG | 2 cut(s) | 213, 1329 |
| BstV1I | GCAGC | 5 cut(s) | 433, 1096, 1681, 2135, 2248 |
| BstV2I | GAAGAC | 5 cut(s) | 629, 816, 965, 2062, 2253 |
| BstX2I | RGATCY | 4 cut(s) | 1263, 1492, 1795, 2157 |
| BstYI | RGATCY | 4 cut(s) | 1263, 1492, 1795, 2157 |
| Bsu36I | CCTNAGG | 1 cut(s) | 738 |
| BsuI | GTATCC | 1 cut(s) | 1299 |
| BsuRI | GGCC | 2 cut(s) | 639, 1918 |
| BtsCI | GGATG | 9 cut(s) | 286, 715, 724, 988, 1053, 1762, 2533, 2680, 2941 |
| BtsI | GCAGTG | 1 cut(s) | 2996 |
| BtsIMutI | CAGTG | 5 cut(s) | 772, 2029, 2142, 2892, 2996 |
| Cac8I | GCNNGC | 3 cut(s) | 1785, 2283, 2343 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2359 |
| CciI | TCATGA | 3 cut(s) | 685, 1509, 2290 |
| CfoI | GCGC | 2 cut(s) | 213, 1260 |
| Cfr13I | GGNCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| Csp6I | GTAC | 4 cut(s) | 2003, 2076, 2216, 2746 |
| CviQI | GTAC | 4 cut(s) | 2003, 2076, 2216, 2746 |
| DpnI | GATC | 9 cut(s) | 525, 1245, 1265, 1494, 1797, 1869, 2159, 2631, 2958 |
| DpnII | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| Eam1104I | CTCTTC | 3 cut(s) | 602, 2226, 2925 |
| EarI | CTCTTC | 3 cut(s) | 602, 2226, 2925 |
| Ecl136II | GAGCTC | 2 cut(s) | 512, 1507 |
| Eco130I | CCWWGG | 3 cut(s) | 1461, 1626, 2419 |
| Eco147I | AGGCCT | 1 cut(s) | 639 |
| Eco24I | GRGCYC | 3 cut(s) | 514, 1024, 1509 |
| Eco32I | GATATC | 3 cut(s) | 1189, 1830, 2969 |
| Eco47I | GGWCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| Eco53kI | GAGCTC | 2 cut(s) | 512, 1507 |
| Eco57I | CTGAAG | 2 cut(s) | 1257, 2247 |
| Eco81I | CCTNAGG | 1 cut(s) | 738 |
| Eco88I | CYCGRG | 4 cut(s) | 572, 2400, 2556, 2730 |
| EcoICRI | GAGCTC | 2 cut(s) | 512, 1507 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1129, 2875 |
| EcoRI | GAATTC | 1 cut(s) | 944 |
| EcoRII | CCWGG | 4 cut(s) | 1300, 1588, 1948, 2362 |
| EcoRV | GATATC | 3 cut(s) | 1189, 1830, 2969 |
| EcoT14I | CCWWGG | 3 cut(s) | 1461, 1626, 2419 |
| EcoT22I | ATGCAT | 2 cut(s) | 715, 2347 |
| EcoT38I | GRGCYC | 3 cut(s) | 514, 1024, 1509 |
| ErhI | CCWWGG | 3 cut(s) | 1461, 1626, 2419 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1230, 1262, 2245, 2277 |
| FblI | GTMKAC | 3 cut(s) | 1966, 2052, 2415 |
| Fnu4HI | GCNGC | 6 cut(s) | 447, 734, 1110, 1695, 2124, 2237 |
| FokI | GGATG | 9 cut(s) | 293, 722, 731, 995, 1060, 1769, 2540, 2687, 2948 |
| FriOI | GRGCYC | 3 cut(s) | 514, 1024, 1509 |
| Fsp4HI | GCNGC | 6 cut(s) | 447, 734, 1110, 1695, 2124, 2237 |
| FspBI | CTAG | 3 cut(s) | 1059, 1196, 1928 |
| GlaI | GCGC | 2 cut(s) | 212, 1259 |
| GluI | GCNGC | 6 cut(s) | 447, 734, 1110, 1695, 2124, 2237 |
| GsaI | CCCAGC | 1 cut(s) | 64 |
| GsuI | CTGGAG | 2 cut(s) | 1251, 2868 |
| HaeII | RGCGCY | 1 cut(s) | 1261 |
| HaeIII | GGCC | 2 cut(s) | 639, 1918 |
| HapII | CCGG | 1 cut(s) | 1564 |
| HhaI | GCGC | 2 cut(s) | 213, 1260 |
| Hin6I | GCGC | 2 cut(s) | 211, 1258 |
| HinP1I | GCGC | 2 cut(s) | 211, 1258 |
| HincII | GTYRAC | 3 cut(s) | 543, 1967, 2739 |
| HindII | GTYRAC | 3 cut(s) | 543, 1967, 2739 |
| HindIII | AAGCTT | 1 cut(s) | 1088 |
| HpaII | CCGG | 1 cut(s) | 1564 |
| HphI | GGTGA | 8 cut(s) | 49, 199, 254, 262, 311, 839, 1493, 2513 |
| Hpy166II | GTNNAC | 8 cut(s) | 543, 1671, 1967, 2020, 2053, 2216, 2416, 2739 |
| Hpy8I | GTNNAC | 8 cut(s) | 543, 1671, 1967, 2020, 2053, 2216, 2416, 2739 |
| Hpy99I | CGWCG | 1 cut(s) | 1968 |
| HpyCH4III | ACNGT | 8 cut(s) | 357, 767, 971, 1964, 1971, 2024, 2080, 2943 |
| HpyCH4IV | ACGT | 1 cut(s) | 406 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 509, 1661 |
| HpySE526I | ACGT | 1 cut(s) | 406 |
| HspAI | GCGC | 2 cut(s) | 211, 1258 |
| Kzo9I | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| LguI | GCTCTTC | 1 cut(s) | 2226 |
| LmnI | GCTCC | 5 cut(s) | 220, 517, 1103, 1232, 1741 |
| Lsp1109I | GCAGC | 5 cut(s) | 433, 1096, 1681, 2135, 2248 |
| LweI | GCATC | 6 cut(s) | 271, 700, 1329, 1756, 1978, 2439 |
| MaeI | CTAG | 3 cut(s) | 1059, 1196, 1928 |
| MaeII | ACGT | 1 cut(s) | 406 |
| MaeIII | GTNAC | 3 cut(s) | 997, 1147, 2300 |
| MalI | GATC | 9 cut(s) | 525, 1245, 1265, 1494, 1797, 1869, 2159, 2631, 2958 |
| MboI | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| MfeI | CAATTG | 1 cut(s) | 2195 |
| MflI | RGATCY | 4 cut(s) | 1263, 1492, 1795, 2157 |
| MhlI | GDGCHC | 4 cut(s) | 514, 1024, 1509, 2022 |
| MlyI | GAGTC | 6 cut(s) | 190, 199, 254, 911, 1340, 2698 |
| MmeI | TCCRAC | 6 cut(s) | 330, 371, 389, 894, 1411, 2599 |
| Mph1103I | ATGCAT | 2 cut(s) | 715, 2347 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1941 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2447 |
| MspA1I | CMGCKG | 1 cut(s) | 2977 |
| MspCI | CTTAAG | 1 cut(s) | 866 |
| MspI | CCGG | 1 cut(s) | 1564 |
| MspR9I | CCNGG | 5 cut(s) | 1302, 1565, 1590, 1950, 2364 |
| MunI | CAATTG | 1 cut(s) | 2195 |
| Mva1269I | GAATGC | 1 cut(s) | 2149 |
| MvaI | CCWGG | 4 cut(s) | 1302, 1590, 1950, 2364 |
| MvnI | CGCG | 2 cut(s) | 213, 1329 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 509, 1661 |
| NciI | CCSGG | 1 cut(s) | 1565 |
| NdeII | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| NlaIV | GGNNCC | 4 cut(s) | 375, 1299, 1797, 2108 |
| NmuCI | GTSAC | 1 cut(s) | 2300 |
| NsiI | ATGCAT | 2 cut(s) | 715, 2347 |
| NspI | RCATGY | 2 cut(s) | 1787, 2345 |
| PaeI | GCATGC | 2 cut(s) | 1787, 2345 |
| PaeR7I | CTCGAG | 2 cut(s) | 2556, 2730 |
| PagI | TCATGA | 3 cut(s) | 685, 1509, 2290 |
| PceI | AGGCCT | 1 cut(s) | 639 |
| PciSI | GCTCTTC | 1 cut(s) | 2226 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 403, 1951 |
| PctI | GAATGC | 1 cut(s) | 2149 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1941 |
| PfeI | GAWTC | 4 cut(s) | 225, 394, 431, 1701 |
| PflFI | GACNNNGTC | 1 cut(s) | 199 |
| PfoI | TCCNGGA | 1 cut(s) | 1588 |
| PkrI | GCNGC | 6 cut(s) | 448, 735, 1111, 1696, 2125, 2238 |
| PleI | GAGTC | 6 cut(s) | 190, 198, 253, 911, 1339, 2698 |
| PpsI | GAGTC | 6 cut(s) | 190, 198, 253, 911, 1339, 2698 |
| PpuMI | RGGWCCY | 2 cut(s) | 1129, 2875 |
| Psp124BI | GAGCTC | 2 cut(s) | 514, 1509 |
| Psp1406I | AACGTT | 1 cut(s) | 406 |
| Psp5II | RGGWCCY | 2 cut(s) | 1129, 2875 |
| Psp6I | CCWGG | 4 cut(s) | 1300, 1588, 1948, 2362 |
| PspFI | CCCAGC | 1 cut(s) | 60 |
| PspGI | CCWGG | 4 cut(s) | 1300, 1588, 1948, 2362 |
| PspN4I | GGNNCC | 4 cut(s) | 375, 1299, 1797, 2108 |
| PspPI | GGNCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| PspPPI | RGGWCCY | 2 cut(s) | 1129, 2875 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2359 |
| PsuI | RGATCY | 4 cut(s) | 1263, 1492, 1795, 2157 |
| PsyI | GACNNNGTC | 1 cut(s) | 199 |
| RsaI | GTAC | 4 cut(s) | 2004, 2077, 2217, 2747 |
| RsaNI | GTAC | 4 cut(s) | 2003, 2076, 2216, 2746 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2447 |
| SacI | GAGCTC | 2 cut(s) | 514, 1509 |
| SalI | GTCGAC | 1 cut(s) | 1965 |
| SapI | GCTCTTC | 1 cut(s) | 2226 |
| SatI | GCNGC | 6 cut(s) | 447, 734, 1110, 1695, 2124, 2237 |
| Sau3AI | GATC | 9 cut(s) | 523, 1243, 1263, 1492, 1795, 1867, 2157, 2629, 2956 |
| Sau96I | GGNCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| SchI | GAGTC | 6 cut(s) | 190, 199, 254, 911, 1340, 2698 |
| ScrFI | CCNGG | 5 cut(s) | 1302, 1565, 1590, 1950, 2364 |
| SduI | GDGCHC | 4 cut(s) | 514, 1024, 1509, 2022 |
| SfaNI | GCATC | 6 cut(s) | 271, 700, 1329, 1756, 1978, 2439 |
| Sfr274I | CTCGAG | 2 cut(s) | 2556, 2730 |
| SinI | GGWCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| SlaI | CTCGAG | 2 cut(s) | 2556, 2730 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2447 |
| SmlI | CTYRAG | 5 cut(s) | 866, 1222, 2201, 2556, 2730 |
| SmoI | CTYRAG | 5 cut(s) | 866, 1222, 2201, 2556, 2730 |
| SphI | GCATGC | 2 cut(s) | 1787, 2345 |
| SseBI | AGGCCT | 1 cut(s) | 639 |
| SsiI | CCGC | 4 cut(s) | 213, 734, 1635, 2975 |
| SspMI | CTAG | 3 cut(s) | 1059, 1196, 1928 |
| SstI | GAGCTC | 2 cut(s) | 514, 1509 |
| StuI | AGGCCT | 1 cut(s) | 639 |
| StyD4I | CCNGG | 5 cut(s) | 1300, 1563, 1588, 1948, 2362 |
| StyI | CCWWGG | 3 cut(s) | 1461, 1626, 2419 |
| TaaI | ACNGT | 8 cut(s) | 357, 767, 971, 1964, 1971, 2024, 2080, 2943 |
| TaiI | ACGT | 1 cut(s) | 409 |
| TatI | WGTACW | 2 cut(s) | 2002, 2215 |
| TauI | GCSGC | 1 cut(s) | 736 |
| TfiI | GAWTC | 4 cut(s) | 225, 394, 431, 1701 |
| TscAI | CASTG | 5 cut(s) | 772, 2029, 2142, 2892, 3003 |
| TseFI | GTSAC | 1 cut(s) | 2300 |
| TseI | GCWGC | 5 cut(s) | 446, 1109, 1694, 2123, 2236 |
| Tsp45I | GTSAC | 1 cut(s) | 2300 |
| TspGWI | ACGGA | 3 cut(s) | 1139, 2063, 2831 |
| TspRI | CASTG | 5 cut(s) | 772, 2029, 2142, 2892, 3003 |
| Tth111I | GACNNNGTC | 1 cut(s) | 199 |
| Vha464I | CTTAAG | 1 cut(s) | 866 |
| VneI | GTGCAC | 1 cut(s) | 2018 |
| VpaK11BI | GGWCC | 6 cut(s) | 4, 1129, 1583, 2806, 2875, 2939 |
| XapI | RAATTY | 9 cut(s) | 114, 157, 235, 925, 944, 1414, 1937, 2007, 2581 |
| XceI | RCATGY | 2 cut(s) | 1787, 2345 |
| XhoI | CTCGAG | 2 cut(s) | 2556, 2730 |
| XmiI | GTMKAC | 3 cut(s) | 1966, 2052, 2415 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1941 |
| XspI | CTAG | 3 cut(s) | 1059, 1196, 1928 |
| Zsp2I | ATGCAT | 2 cut(s) | 715, 2347 |