Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002081

Physical Location & Seq

Genomic Coordinates Reverse (-)

9089023 .. 9097781

Gene Structure 8759 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g14760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2982 bp

ATGGACCTAACACTCCCTCACAAGCCAAACCCACTTCTCTCTTCTTCAACCCAATTCACCCCCAAAACCCTTCTTTTCAAACTTCCCACAACCCAAAGACCCAAACTTTCCCGTAAAAATTCAATCTTTCGTGTCAAAGCCTCTGCAAACCCAAATGGCTCTGATGGGTTTTCATGGGTGAGCCTCACTCGGTCCATACGCCGCGGCTCGGAGCAGTTCTGGTCAAGTTTTGGTGACTCAGTGAAGAAGGAAACTGGGTTTGATTTGAAGGAGGTGAATGTGAAGGTGGGGGAGTGTTTGGGGCAAGCTGGGGCTGAGTTGGAACGGTTTAGGACCGAGTTGGTGCCCCAGTTTGTGAGTTGGAATCGGTTGGAACATTGGAAGGATGTGAAGACATGGGAACCTAAGAGATTTGCTGCATTGGTTGTCTATGTTTTAGTTGCCGTAGTTTCGTGTCAGAGAATGTATGTAGCAGTTCGAGCTCCTATCCAAGATCGTCGGAGAAGAGAGTTGACAGAGGCTTATATGGAGGCTGTGGTTCCCGAGCCATCTCCGAGTAATGTTAGAAAGCTTAAGAAGGGTATGTGGAGGAAGACGACACCCAAAGGCCTGAGAATGAAGAAGTTTATTGAAGGACCTGATGGAACACTTGTTCATGATAGCTCTTATGTGGGAGAGGATGCGTGGGATGATGAACCGCAGCTGCCTCAGGACAATGTGAAACAATTTATTGATAGTAATATAAAACTAAATCCAGAAGAGAAGAAGGAATTGAAAGAAGACCTGGGAATTTCTGGTCAAGTTCAAGAGAATACTGGAACATGGCGTGAGAGACTTCAGAAATGGAAGGAGATCCTCCAAAATGAAAAGTTAGCGGAGCAGTTGGACTCTGCAAATTCCAAGTATGTAGTTGAATTTGACATGAAAGAGGTTGAAAACAGTCTCCGCAAGGATGTAGTGGAGAAGGTAACAGAGACTCAAGGAACAAGGGCATTATGGATAGCTAAAAGATGGTGGCTTTATCGTCCCAAACTTCCTTACACCTACTTTCTTCAAAAGCTTGACAGCTCTGAGGTTGCTGCTGTTGTATTTACAGAAGACCTAAAAAGAATATATGTTACTATGAAAGAAGGTTTTCCATTAGAATATGTTGTTGATATCCCCCTAGACCCGTATCTGTTTGAGAATATCTCAAGTTCTGGAGCTGAAGTTGATCTTCTTCAGAAACGCCAGATCCACTACTTTATGAAGGTTGTGATTGCATTGGTGCCTGGGTTACTCATTCTTTGGCTAATACGCGAGTCTGTGATGCTTCTGCATATCACCTCTAAGCGTTTCCTCTACAAAAAGTACAATCAACTTTTTGACATGGCTCATGCAGAAAACTTTATCCTGCCTGTCGGAGAAGTAGGGGAAACAAAATCCATGTCCAAGGAGGTTGTGCTAGGAGGCGATGTTTGGGATCTTCTTGATGAGCTGATGATTTATATGGGAAATCCAATGCAATACTATGAAAGAGATGTGAAGTTTGTCAGGGGTGTTCTTCTCTCTGGACCTCCTGGAACTGGTAAAACTCTTTTTGCAAGGACACTTGCAAAGGAAAGCGGGTTACCATTTGTTTTTGCTTCAGGCGCTGAGTTCACAGATAGTGAGAAAAGTGGTGCTGCAAAAGTCAATGAGATGTTTTCTATTGCAAGGAGAAATGCTCCTTGTTTTGTATTCGTGGATGAAATTGATGCTATTGCTGGAAGGCATGCAAGACAGGATCCTAGAAGAAGAGCAACATTTGAGGCTTTGATTGCGCAGCTTGATGGAGAGAAGGAAAAAACTGGTGTTGATCGCTTCTCTCTCAGACAAGCTGTGATATTCATCTGTGCTACCAACAGGCCAGATGAATTAGACCTCGAGTTTGTTCGTTCTGGACGTATTGACCGTCGACTGTACATTGGTCTTCCTGATGCAAATCAACGAGTGCAAATTTTTAAAGTGCACAGCACGGGAAAGCAACTTGCAGAAGATGTAGACTTTGAGAAAGTTGTCTTCCGTACGGTTGGTTTTTCTGGGGCAGATATTAGGAATCTTGTTAATGAAGCAGCCATTATGTCAGTGAGGAAAGGACGTTCAGAGATATATCAAGAAGACATAGTGGATGTATTAGATAAACAATTGCTTGAGGGGATGGGTGTACTTCTTACTGAGGAAGAGCAGCGTAAATGCGAACAAAGTGTGTCTTCTGAAAAGAAGAAACTGCTGGCTGTTCATGAAGCTGGTCACATACTATTAGCTCATCTGTTTCCTCAATTTGACTGGCATGCATTTTCTCAACTTCTGCCTGGTGGGAAGGAAACTGCAGTATCTGTATTCTACCCCCGAGAAGATATGGTAGACCAAGGTTATACAACCTTTGGCTACATGAAGATGCAAATGGTGGTAGCTCATGGTGGGCGTTGCGCAGAACGTGTTGTGTATGGTGATGACATAACTGATGGAGGAACAGATGATCTGGAAAAGCTAACAAAGATTGCTCGAGAGATGGTAATTAGCCCTCAAAACTCAAGATTGGGGCTTACAGCTCTAACAAAAAGAATTGGACTGATGGATCGACCAGATAGTCCAGATGGCGAGTTGATAAGATACAGGTGGGAGGACCCCAATGTGATTCCGGCCAATATGACTCTTGAAGTGTCTGAGCTTTTTACCCGAGAATTGACAAGGTACATCGAGGAAACAGAAGAACTTGCAATGAATGGTTTGAGAAACAACAGGCACATTCTGGACATGATTACTGAGGAACTAATGGAGAAGTCAAGGATTACTGGATTGGAGGTTATAGAGAAAATGAAGGACCTTTCTCCAGTCATGTTCGATGATTTTGTAAAGCCATTTCAGATCAACTTGGAAGAGGACGGACCGCTGCCACATAATGATCAGTTGCGATATAAACCATTGGACATATATCCTGCACCATTGCATAGATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

994

Amino Acids

113.76

Weight (kDa)

6.05

Isoelectric Point (pI)

46.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	514 - 650	6.1e-34	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	673 - 715	8.4e-14	AAA+ lid domain
Peptidase_M41	PF01434	743 - 943	2.1e-22	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002081)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37960 AT2G37960 AT3G54060 AT3G54060
fragaria_vesca	FvH4_3g14760 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360
malus_domestica	MD04G1090200.v1.1 MD04G1143500.v1.1 MD12G1157700.v1.1
prunus_persica	Prupe.6G268000_v2.0.a1 Prupe.6G268000_v2.0.a1
pyrus_communis	pycom04g13020 pycom08g09900 pycom09g03010 pycom12g14980
rosa_chinensis	RchiOBHm_Chr1g0324481 RchiOBHm_Chr3g0464181 RchiOBHm_Chr5g0060551
rosa_laevigata	RLG00000003414 RLG00000014209 RLG00000017801 RLG00000024717 RLG00000030652 RLG00000030659
rosa_multiflora	Rmu_sc0001619.1_g000001 Rmu_sc0006492.1_g000022 Rmu_sc0032722.1_g000001 Rmu_sc0041392.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415950
rosa_rugosa	Rorug03G0070900
rosa_samantha	Rh1AG205500 Rh1DG068100 Rh3BG132400 Rh3CG134600 Rh3DG133600 Rh5BG170400 Rh6AG098500 Rh6CG247400 Rh6DG081300 Rh7CG209500
rosa_wichuraiana	Rw3G010830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2610
Acc16I	TGCGCA	2 cut(s)	1803, 2452
AccB1I	GGYRCC	2 cut(s)	343, 1267
AccI	GTMKAC	3 cut(s)	1936, 2022, 2385
AccII	CGCG	2 cut(s)	204, 1299
AciI	CCGC	7 cut(s)	202, 204, 698, 875, 946, 1605, 2912
AclWI	GGATC	6 cut(s)	847, 1228, 1470, 1760, 1773, 2607
AcoI	YGGCCR	1 cut(s)	2664
AcsI	RAATTY	5 cut(s)	118, 789, 895, 914, 1977
AcuI	CTGAAG	4 cut(s)	821, 1205, 1227, 1611
AfaI	GTAC	5 cut(s)	1352, 1943, 2047, 2187, 2717
AfiI	CCNNNNNNNGG	2 cut(s)	208, 1565
AflII	CTTAAG	1 cut(s)	572
AflIII	ACRYGT	1 cut(s)	2458
AjnI	CCWGG	4 cut(s)	783, 1270, 1558, 2332
AloI	GAACNNNNNNTCC	4 cut(s)	636, 668, 2104, 2136
Alw21I	GWGCWC	2 cut(s)	484, 1992
Alw26I	GTCTC	3 cut(s)	826, 947, 968
Alw44I	GTGCAC	1 cut(s)	1988
AlwI	GGATC	6 cut(s)	847, 1228, 1470, 1760, 1773, 2607
AlwNI	CAGNNNCTG	2 cut(s)	1634, 2357
Ama87I	CYCGRG	5 cut(s)	542, 1904, 2370, 2526, 2700
AoxI	GGCC	3 cut(s)	607, 1886, 2664
ApaLI	GTGCAC	1 cut(s)	1988
ApeKI	GCWGC	9 cut(s)	416, 700, 703, 1079, 1664, 1804, 2093, 2206, 2914
ApoI	RAATTY	5 cut(s)	118, 789, 895, 914, 1977
ArsI	GACNNNNNNTTYG	4 cut(s)	1412, 1444, 1892, 1924
Asp700I	GAANNNNTTC	1 cut(s)	1134
AspLEI	GCGC	3 cut(s)	1634, 1804, 2453
AspS9I	GGNCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
AsuHPI	GGTGA	6 cut(s)	49, 190, 245, 286, 1315, 2483
AvaI	CYCGRG	5 cut(s)	542, 1904, 2370, 2526, 2700
AvaII	GGWCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
AxyI	CCTNAGG	1 cut(s)	708
BaeGI	GKGCMC	2 cut(s)	348, 1992
BaeI	ACNNNNGTAYC	2 cut(s)	2337, 2370
BamHI	GGATCC	1 cut(s)	1765
BanI	GGYRCC	2 cut(s)	343, 1267
BanII	GRGCYC	1 cut(s)	484
BbsI	GAAGAC	8 cut(s)	398, 599, 786, 1104, 1943, 2032, 2145, 2223
Bbv12I	GWGCWC	2 cut(s)	484, 1992
BbvI	GCAGC	9 cut(s)	403, 690, 712, 1066, 1651, 1816, 2105, 2218, 2901
BceAI	ACGGC	1 cut(s)	428
BciT130I	CCWGG	4 cut(s)	785, 1272, 1560, 2334
BclI	TGATCA	1 cut(s)	2926
BcoDI	GTCTC	3 cut(s)	826, 947, 968
BfaI	CTAG	3 cut(s)	1166, 1445, 1770
BfmI	CTRYAG	1 cut(s)	2349
BfoI	RGCGCY	1 cut(s)	1635
BfrI	CTTAAG	1 cut(s)	572
Bme1390I	CCNGG	4 cut(s)	785, 1272, 1560, 2334
Bme18I	GGWCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
BmeT110I	CYCGRG	5 cut(s)	542, 1904, 2370, 2526, 2700
BmgT120I	GGNCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
BmiI	GGNNCC	6 cut(s)	345, 402, 540, 1269, 1767, 2649
BmrFI	CCNGG	4 cut(s)	785, 1272, 1560, 2334
BmrI	ACTGGG	2 cut(s)	264, 343
BmsI	GCATC	5 cut(s)	670, 1299, 1726, 1948, 2409
BmuI	ACTGGG	2 cut(s)	264, 343
BpiI	GAAGAC	8 cut(s)	398, 599, 786, 1104, 1943, 2032, 2145, 2223
BplI	GAGNNNNNCTC	6 cut(s)	172, 204, 1175, 1207, 1690, 1722
BpmI	CTGGAG	2 cut(s)	1221, 2838
BpuEI	CTTGAG	4 cut(s)	963, 1177, 2192, 2539
BsaBI	GATNNNNATC	2 cut(s)	1868, 1962
BsaJI	CCNNGG	5 cut(s)	202, 784, 1271, 1431, 2389
BsaXI	ACNNNNNCTCC	4 cut(s)	1194, 1224, 1440, 1470
Bsc4I	CCNNNNNNNGG	2 cut(s)	208, 1565
Bse1I	ACTGG	8 cut(s)	259, 349, 820, 1570, 1834, 2312, 2821, 2855
Bse21I	CCTNAGG	1 cut(s)	708
Bse3DI	GCAATG	2 cut(s)	2748, 2966
Bse8I	GATNNNNATC	2 cut(s)	1868, 1962
BseBI	CCWGG	4 cut(s)	785, 1272, 1560, 2334
BseDI	CCNNGG	5 cut(s)	202, 784, 1271, 1431, 2389
BseGI	GGATG	7 cut(s)	391, 685, 694, 958, 1732, 2155, 2184
BseJI	GATNNNNATC	2 cut(s)	1868, 1962
BseLI	CCNNNNNNNGG	2 cut(s)	208, 1565
BseMI	GCAATG	2 cut(s)	2748, 2966
BseNI	ACTGG	8 cut(s)	259, 349, 820, 1570, 1834, 2312, 2821, 2855
BseSI	GKGCMC	2 cut(s)	348, 1992
BseXI	GCAGC	9 cut(s)	403, 690, 712, 1066, 1651, 1816, 2105, 2218, 2901
BseYI	CCCAGC	1 cut(s)	308
BsgI	GTGCAG	1 cut(s)	2946
Bsh1236I	CGCG	2 cut(s)	204, 1299
BshFI	GGCC	3 cut(s)	609, 1888, 2666
BshNI	GGYRCC	2 cut(s)	343, 1267
BsiHKAI	GWGCWC	2 cut(s)	484, 1992
BsiHKCI	CYCGRG	5 cut(s)	542, 1904, 2370, 2526, 2700
BsiSI	CCGG	1 cut(s)	2663
BsiWI	CGTACG	1 cut(s)	2045
BslFI	GGGAC	1 cut(s)	1011
BslI	CCNNNNNNNGG	2 cut(s)	208, 1565
BsmAI	GTCTC	3 cut(s)	826, 947, 968
BsmFI	GGGAC	1 cut(s)	1011
BsnI	GGCC	3 cut(s)	609, 1888, 2666
BsoBI	CYCGRG	5 cut(s)	542, 1904, 2370, 2526, 2700
Bsp1286I	GDGCHC	3 cut(s)	348, 484, 1992
Bsp1407I	TGTACA	1 cut(s)	1941
BspACI	CCGC	7 cut(s)	202, 204, 698, 875, 946, 1605, 2912
BspANI	GGCC	3 cut(s)	609, 1888, 2666
BspFNI	CGCG	2 cut(s)	204, 1299
BspHI	TCATGA	2 cut(s)	655, 2260
BspLI	GGNNCC	6 cut(s)	345, 402, 540, 1269, 1767, 2649
BspMAI	CTGCAG	1 cut(s)	2353
BspPI	GGATC	6 cut(s)	847, 1228, 1470, 1760, 1773, 2607
BspQI	GCTCTTC	2 cut(s)	1771, 2196
BspT107I	GGYRCC	2 cut(s)	343, 1267
BspTI	CTTAAG	1 cut(s)	572
BsrDI	GCAATG	2 cut(s)	2748, 2966
BsrGI	TGTACA	1 cut(s)	1941
BsrI	ACTGG	8 cut(s)	259, 349, 820, 1570, 1834, 2312, 2821, 2855
BssECI	CCNNGG	5 cut(s)	202, 784, 1271, 1431, 2389
BssT1I	CCWWGG	2 cut(s)	1431, 2389
Bst2UI	CCWGG	4 cut(s)	785, 1272, 1560, 2334
Bst4CI	ACNGT	5 cut(s)	327, 941, 1934, 1941, 2050
Bst6I	CTCTTC	6 cut(s)	46, 499, 753, 1771, 2196, 2895
BstAFI	CTTAAG	1 cut(s)	572
BstAUI	TGTACA	1 cut(s)	1941
BstC8I	GCNNGC	4 cut(s)	306, 1755, 2253, 2313
BstDSI	CCRYGG	1 cut(s)	202
BstEII	GGTNACC	1 cut(s)	1608
BstF5I	GGATG	7 cut(s)	391, 685, 694, 958, 1732, 2155, 2184
BstFNI	CGCG	2 cut(s)	204, 1299
BstH2I	RGCGCY	1 cut(s)	1635
BstHHI	GCGC	3 cut(s)	1634, 1804, 2453
BstMAI	GTCTC	3 cut(s)	826, 947, 968
BstMWI	GCNNNNNNNGC	3 cut(s)	479, 1631, 1799
BstNI	CCWGG	4 cut(s)	785, 1272, 1560, 2334
BstNSI	RCATGY	2 cut(s)	1757, 2315
BstPI	GGTNACC	1 cut(s)	1608
BstSCI	CCNGG	4 cut(s)	783, 1270, 1558, 2332
BstSFI	CTRYAG	1 cut(s)	2349
BstSLI	GKGCMC	2 cut(s)	348, 1992
BstUI	CGCG	2 cut(s)	204, 1299
BstV1I	GCAGC	9 cut(s)	403, 690, 712, 1066, 1651, 1816, 2105, 2218, 2901
BstV2I	GAAGAC	8 cut(s)	398, 599, 786, 1104, 1943, 2032, 2145, 2223
BstX2I	RGATCY	4 cut(s)	852, 1233, 1462, 1765
BstYI	RGATCY	4 cut(s)	852, 1233, 1462, 1765
Bsu36I	CCTNAGG	1 cut(s)	708
BsuRI	GGCC	3 cut(s)	609, 1888, 2666
BtgI	CCRYGG	1 cut(s)	202
BtgZI	GCGATG	1 cut(s)	1467
BtsCI	GGATG	7 cut(s)	391, 685, 694, 958, 1732, 2155, 2184
BtsIMutI	CAGTG	2 cut(s)	246, 2112
Cac8I	GCNNGC	4 cut(s)	306, 1755, 2253, 2313
CaiI	CAGNNNCTG	2 cut(s)	1634, 2357
CciI	TCATGA	2 cut(s)	655, 2260
CfoI	GCGC	3 cut(s)	1634, 1804, 2453
Cfr13I	GGNCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
Cfr42I	CCGCGG	1 cut(s)	205
CpoI	CGGWCCG	1 cut(s)	2909
Csp6I	GTAC	5 cut(s)	1351, 1942, 2046, 2186, 2716
CspI	CGGWCCG	1 cut(s)	2909
CviQI	GTAC	5 cut(s)	1351, 1942, 2046, 2186, 2716
DraI	TTTAAA	1 cut(s)	1984
DrdI	GACNNNNNNGTC	1 cut(s)	2610
DseDI	GACNNNNNNGTC	1 cut(s)	2610
EaeI	YGGCCR	1 cut(s)	2664
Eam1104I	CTCTTC	6 cut(s)	46, 499, 753, 1771, 2196, 2895
EarI	CTCTTC	6 cut(s)	46, 499, 753, 1771, 2196, 2895
Ecl136II	GAGCTC	1 cut(s)	482
Eco130I	CCWWGG	2 cut(s)	1431, 2389
Eco147I	AGGCCT	1 cut(s)	609
Eco24I	GRGCYC	1 cut(s)	484
Eco32I	GATATC	1 cut(s)	1159
Eco47I	GGWCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
Eco53kI	GAGCTC	1 cut(s)	482
Eco57I	CTGAAG	4 cut(s)	821, 1205, 1227, 1611
Eco81I	CCTNAGG	1 cut(s)	708
Eco88I	CYCGRG	5 cut(s)	542, 1904, 2370, 2526, 2700
Eco91I	GGTNACC	1 cut(s)	1608
EcoICRI	GAGCTC	1 cut(s)	482
EcoO109I	RGGNCCY	3 cut(s)	635, 2647, 2845
EcoO65I	GGTNACC	1 cut(s)	1608
EcoRII	CCWGG	4 cut(s)	783, 1270, 1558, 2332
EcoRV	GATATC	1 cut(s)	1159
EcoT14I	CCWWGG	2 cut(s)	1431, 2389
EcoT22I	ATGCAT	1 cut(s)	2317
EcoT38I	GRGCYC	1 cut(s)	484
ErhI	CCWWGG	2 cut(s)	1431, 2389
FalI	AAGNNNNNCTT	4 cut(s)	1200, 1232, 2215, 2247
FaqI	GGGAC	1 cut(s)	1011
FauI	CCCGC	1 cut(s)	1598
FbaI	TGATCA	1 cut(s)	2926
FblI	GTMKAC	3 cut(s)	1936, 2022, 2385
FokI	GGATG	7 cut(s)	398, 692, 701, 965, 1739, 2162, 2191
FriOI	GRGCYC	1 cut(s)	484
FspBI	CTAG	3 cut(s)	1166, 1445, 1770
FspI	TGCGCA	2 cut(s)	1803, 2452
GlaI	GCGC	3 cut(s)	1633, 1803, 2452
GsaI	CCCAGC	1 cut(s)	312
GsuI	CTGGAG	2 cut(s)	1221, 2838
HaeII	RGCGCY	1 cut(s)	1635
HaeIII	GGCC	3 cut(s)	609, 1888, 2666
HapII	CCGG	1 cut(s)	2663
HhaI	GCGC	3 cut(s)	1634, 1804, 2453
Hin6I	GCGC	3 cut(s)	1632, 1802, 2451
HinP1I	GCGC	3 cut(s)	1632, 1802, 2451
HincII	GTYRAC	2 cut(s)	513, 1937
HindII	GTYRAC	2 cut(s)	513, 1937
HindIII	AAGCTT	2 cut(s)	569, 1058
HinfI	GANTC	8 cut(s)	236, 364, 887, 976, 1301, 2077, 2659, 2674
HpaII	CCGG	1 cut(s)	2663
HphI	GGTGA	6 cut(s)	49, 190, 245, 286, 1315, 2483
Hpy166II	GTNNAC	7 cut(s)	513, 1641, 1937, 1990, 2023, 2186, 2386
Hpy8I	GTNNAC	7 cut(s)	513, 1641, 1937, 1990, 2023, 2186, 2386
Hpy99I	CGWCG	2 cut(s)	501, 1938
HpyCH4III	ACNGT	5 cut(s)	327, 941, 1934, 1941, 2050
HpyCH4IV	ACGT	3 cut(s)	1924, 2119, 2458
HpyF10VI	GCNNNNNNNGC	3 cut(s)	479, 1631, 1799
HpySE526I	ACGT	3 cut(s)	1924, 2119, 2458
HspAI	GCGC	3 cut(s)	1632, 1802, 2451
Ksp22I	TGATCA	1 cut(s)	2926
KspI	CCGCGG	1 cut(s)	205
LguI	GCTCTTC	2 cut(s)	1771, 2196
LmnI	GCTCC	5 cut(s)	211, 487, 877, 1202, 1711
Lsp1109I	GCAGC	9 cut(s)	403, 690, 712, 1066, 1651, 1816, 2105, 2218, 2901
LweI	GCATC	5 cut(s)	670, 1299, 1726, 1948, 2409
MaeI	CTAG	3 cut(s)	1166, 1445, 1770
MaeII	ACGT	3 cut(s)	1924, 2119, 2458
MaeIII	GTNAC	6 cut(s)	233, 967, 1117, 1275, 1608, 2270
MfeI	CAATTG	1 cut(s)	2165
MflI	RGATCY	4 cut(s)	852, 1233, 1462, 1765
MhlI	GDGCHC	3 cut(s)	348, 484, 1992
MlyI	GAGTC	5 cut(s)	230, 881, 970, 1310, 2668
MmeI	TCCRAC	6 cut(s)	300, 341, 351, 479, 864, 1381
Mph1103I	ATGCAT	1 cut(s)	2317
MroXI	GAANNNNTTC	1 cut(s)	1134
MseI	TTAA	4 cut(s)	573, 1983, 2085, 2980
MslI	CAYNNNNRTG	1 cut(s)	2417
MspA1I	CMGCKG	3 cut(s)	204, 703, 2914
MspCI	CTTAAG	1 cut(s)	572
MspI	CCGG	1 cut(s)	2663
MspR9I	CCNGG	4 cut(s)	785, 1272, 1560, 2334
MunI	CAATTG	1 cut(s)	2165
MvaI	CCWGG	4 cut(s)	785, 1272, 1560, 2334
MvnI	CGCG	2 cut(s)	204, 1299
MwoI	GCNNNNNNNGC	3 cut(s)	479, 1631, 1799
NlaIV	GGNNCC	6 cut(s)	345, 402, 540, 1269, 1767, 2649
NmuCI	GTSAC	2 cut(s)	233, 2270
NsbI	TGCGCA	2 cut(s)	1803, 2452
NsiI	ATGCAT	1 cut(s)	2317
NspI	RCATGY	2 cut(s)	1757, 2315
PaeI	GCATGC	2 cut(s)	1757, 2315
PaeR7I	CTCGAG	2 cut(s)	1904, 2526
PagI	TCATGA	2 cut(s)	655, 2260
PceI	AGGCCT	1 cut(s)	609
PciSI	GCTCTTC	2 cut(s)	1771, 2196
PcsI	WCGNNNNNNNCGW	2 cut(s)	1921, 1930
PdmI	GAANNNNTTC	1 cut(s)	1134
PfeI	GAWTC	3 cut(s)	364, 2077, 2659
Pfl23II	CGTACG	1 cut(s)	2045
PfoI	TCCNGGA	1 cut(s)	1558
PleI	GAGTC	5 cut(s)	230, 881, 970, 1309, 2668
PpsI	GAGTC	5 cut(s)	230, 881, 970, 1309, 2668
PpuMI	RGGWCCY	3 cut(s)	635, 2647, 2845
Psp124BI	GAGCTC	1 cut(s)	484
Psp5II	RGGWCCY	3 cut(s)	635, 2647, 2845
Psp6I	CCWGG	4 cut(s)	783, 1270, 1558, 2332
PspEI	GGTNACC	1 cut(s)	1608
PspFI	CCCAGC	1 cut(s)	308
PspGI	CCWGG	4 cut(s)	783, 1270, 1558, 2332
PspLI	CGTACG	1 cut(s)	2045
PspN4I	GGNNCC	6 cut(s)	345, 402, 540, 1269, 1767, 2649
PspPI	GGNCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
PspPPI	RGGWCCY	3 cut(s)	635, 2647, 2845
PspXI	VCTCGAGB	1 cut(s)	1904
PstI	CTGCAG	1 cut(s)	2353
PstNI	CAGNNNCTG	2 cut(s)	1634, 2357
PsuI	RGATCY	4 cut(s)	852, 1233, 1462, 1765
PvuII	CAGCTG	1 cut(s)	703
RsaI	GTAC	5 cut(s)	1352, 1943, 2047, 2187, 2717
RsaNI	GTAC	5 cut(s)	1351, 1942, 2046, 2186, 2716
RseI	CAYNNNNRTG	1 cut(s)	2417
Rsr2I	CGGWCCG	1 cut(s)	2909
RsrII	CGGWCCG	1 cut(s)	2909
SacI	GAGCTC	1 cut(s)	484
SacII	CCGCGG	1 cut(s)	205
SalI	GTCGAC	1 cut(s)	1935
SapI	GCTCTTC	2 cut(s)	1771, 2196
SaqAI	TTAA	4 cut(s)	573, 1983, 2085, 2980
Sau96I	GGNCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
SchI	GAGTC	5 cut(s)	230, 881, 970, 1310, 2668
ScrFI	CCNGG	4 cut(s)	785, 1272, 1560, 2334
SduI	GDGCHC	3 cut(s)	348, 484, 1992
SfaNI	GCATC	5 cut(s)	670, 1299, 1726, 1948, 2409
SfcI	CTRYAG	1 cut(s)	2349
Sfr274I	CTCGAG	2 cut(s)	1904, 2526
Sfr303I	CCGCGG	1 cut(s)	205
SgrBI	CCGCGG	1 cut(s)	205
SinI	GGWCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
SlaI	CTCGAG	2 cut(s)	1904, 2526
SmiMI	CAYNNNNRTG	1 cut(s)	2417
SmlI	CTYRAG	7 cut(s)	572, 978, 1192, 1904, 2171, 2526, 2554
SmoI	CTYRAG	7 cut(s)	572, 978, 1192, 1904, 2171, 2526, 2554
SphI	GCATGC	2 cut(s)	1757, 2315
SseBI	AGGCCT	1 cut(s)	609
SsiI	CCGC	7 cut(s)	202, 204, 698, 875, 946, 1605, 2912
SspMI	CTAG	3 cut(s)	1166, 1445, 1770
SstI	GAGCTC	1 cut(s)	484
StuI	AGGCCT	1 cut(s)	609
StyD4I	CCNGG	4 cut(s)	783, 1270, 1558, 2332
StyI	CCWWGG	2 cut(s)	1431, 2389
TaaI	ACNGT	5 cut(s)	327, 941, 1934, 1941, 2050
TaiI	ACGT	3 cut(s)	1927, 2122, 2461
TaqI	TCGA	7 cut(s)	478, 1905, 1936, 2527, 2602, 2721, 2865
TaqII	GACCGA	2 cut(s)	180, 350
TatI	WGTACW	3 cut(s)	1350, 1941, 2185
TauI	GCSGC	2 cut(s)	204, 207
TfiI	GAWTC	3 cut(s)	364, 2077, 2659
Tru1I	TTAA	4 cut(s)	573, 1983, 2085, 2980
Tru9I	TTAA	4 cut(s)	573, 1983, 2085, 2980
TscAI	CASTG	2 cut(s)	246, 2112
TseFI	GTSAC	2 cut(s)	233, 2270
TseI	GCWGC	9 cut(s)	416, 700, 703, 1079, 1664, 1804, 2093, 2206, 2914
Tsp45I	GTSAC	2 cut(s)	233, 2270
TspGWI	ACGGA	2 cut(s)	2033, 2922
TspRI	CASTG	2 cut(s)	246, 2112
Vha464I	CTTAAG	1 cut(s)	572
VneI	GTGCAC	1 cut(s)	1988
VpaK11BI	GGWCC	8 cut(s)	4, 192, 333, 635, 1553, 2647, 2845, 2909
XapI	RAATTY	5 cut(s)	118, 789, 895, 914, 1977
XceI	RCATGY	2 cut(s)	1757, 2315
XhoI	CTCGAG	2 cut(s)	1904, 2526
XmiI	GTMKAC	3 cut(s)	1936, 2022, 2385
XmnI	GAANNNNTTC	1 cut(s)	1134
XspI	CTAG	3 cut(s)	1166, 1445, 1770
Zsp2I	ATGCAT	1 cut(s)	2317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.