Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002081

Physical Location & Seq

Genomic Coordinates Reverse (-)

17861260 .. 17870482

Gene Structure 9223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG170400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGAAAGAGGTTGAAAACAGTCTTCGCAAGGATGTAGTGGAGAAGGTAACAGAGACACAAGGAACAAGGGCGTTATGGATAGCTAAAAGATGGTGGCTTTATCGTCCCAAACTTCCTTATACCTACTTTCTTCAAAAGCTTGACAGCTCTGAGGTTGCTGCTGTTGTATTTACAGAAGACCTAAAAAGAATATATGTTACTATGAAAGAAGGTTTTCCATTAGAATATGTTGTTGATATCCCCCTAGACCCGTATTTGTTTGAGAATATCTCAAGTTCTGGAGCTGAAGTTGATCTTCTTCAGAAACGCCAGATCCACTACTTTATGAAGGTTGTGATTGCATTGGTGCCTGGGTTACTCATTCTCTGGCTAATACGCGAGTCTGTGATGCTTCTGCATATCACTTCTAAGCGTTTTCTCTACAAAAAGTATAATCAACTTTTTGATATGGCTTATGCAGAAAATTTTATCCTGCCTGTTGGAGATGTAGGGGAAACAAGATCCATGTCCAAGGAAGTTGTGTTAGGTGGTGATGTTTGGGATCTTCTTGATGAGCTGATGATTTATATGGGAAATCCAATGCAATACTATGAAAAAGATGTGAAGTTTGTCAGGGGTGTTCTTCTCTCTGGACCTCCTGGAACTGGCAAAACACTTTTTGCAAGGACACTTGCAAAGGAAAGTGGGTTGCCATTTGTTTTTGCTTCGGGTGCGGAGTTTACAGATAGTGAAAAAAGTGGTGCTGCAAAAATCAATGAGATGTTTTCTATTGCAAGGAGAAATGCTCCTTGTTTTGTATTTGTGGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGACAGGATCCTAGAAGAAGAGCAACATTTGAGGCTTTGATTGCACAGCTCGATGGGGAGAAGGAAAAAACTGGCGTTGATCGCTTCTCTCTCAGACAAGCTGTGATATTCATCTGTGCGACCAACAGGCCAGATGAATTAGACCTTGAATTTGTTCGATCTGGACGTATTGACCGTCGACTGTACATTGGTTTGCCTGATGCAAAGCAACGAGTGCAAATTTTTAAAGTGCACAGCGCAGGAAAGCAACTTGCAGAAGATGTAGATTTTCGAAAAGTTGTCTTCCGTACGGTTGGTTTTTCTGGGGCAGATATTCGGAATCTTGTAAATGAAGCAGCAATTATGTCAGTGAGGAAAGGACGTTCAGAGATATATCAGGAAGACATAGTGGATGTATTAGATAAACAATTGCTTGAGGGCATGGGTGTACTTCTTACTGAGGAAGAGCAGCGGAAGTGCGAACAAAGTGTGTCTTCTGAAAAGAAGAAACTGCTGGCTGTTCATGAAGCTGGTCACATACTATTAGCTCATCTGTTTCCTCAATTTGACTGGCATGCATTTTCTCAACTTCTGCCTGGTGGGAAGGAAACTGCAGTATCTGTATTCTATCCCCGAGAAGATATGGTAGACCAAGGTTATACAACCTTTGGCTACATGAAGATGCAAATGGTGGTAGCTCATGGTGGGCGTTGCGCTGAACGTGTTGTGTATGGTGATGACATAACTGATGGAGGAAGAGATGATCTGGAAAAGCTAACAAAGATTGCTCGAGAGATGGTAATTAGCCCTCAAAACTCAAGATTGGGGCTTACAGCTCTAACAAAAAGAATTGGACTAATGGATCGACCAGACAGTCCAGATGGCGAATTGATAAGATACAGGTGGGAGGACCCCAATGTGATTCCAGCCAATATGACTCTTGAAGTGTCTGAGCTATTTACCCGAGAGTTGACAAGGTACATTGAGGAAACAGAAGAACTTGCGATGAATGGTTTGAGAAACAACAGGCACATTCTGGACATGATTACTGAGGAACTATTAGAGAAGTCAAGGATTACTGGATTGGAGGTTATAGAGAAAATGAAGGACCTTTCTCCAGTCATGTTCGAGGATTTTGTAACGCCATATCAGATAAACTTGGAAGAGGATGGACCGTTGCCACATAACGATCAGTTGCGATATCAACCATTGGACATATATCCTGCACCACTGCACAGATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

686

Amino Acids

78.55

Weight (kDa)

5.47

Isoelectric Point (pI)

48.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	207 - 343	3e-34	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	366 - 408	2.7e-13	AAA+ lid domain
Peptidase_M41	PF01434	436 - 636	6.6e-23	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002081)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37960 AT2G37960 AT3G54060 AT3G54060
fragaria_vesca	FvH4_3g14760 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360
malus_domestica	MD04G1090200.v1.1 MD04G1143500.v1.1 MD12G1157700.v1.1
prunus_persica	Prupe.6G268000_v2.0.a1 Prupe.6G268000_v2.0.a1
pyrus_communis	pycom04g13020 pycom08g09900 pycom09g03010 pycom12g14980
rosa_chinensis	RchiOBHm_Chr1g0324481 RchiOBHm_Chr3g0464181 RchiOBHm_Chr5g0060551
rosa_laevigata	RLG00000003414 RLG00000014209 RLG00000017801 RLG00000024717 RLG00000030652 RLG00000030659
rosa_multiflora	Rmu_sc0001619.1_g000001 Rmu_sc0006492.1_g000022 Rmu_sc0032722.1_g000001 Rmu_sc0041392.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415950
rosa_rugosa	Rorug03G0070900
rosa_samantha	Rh1AG205500 Rh1DG068100 Rh3BG132400 Rh3CG134600 Rh3DG133600 Rh5BG170400 Rh6AG098500 Rh6CG247400 Rh6DG081300 Rh7CG209500
rosa_wichuraiana	Rw3G010830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1689
AccB1I	GGYRCC	1 cut(s)	346
AccI	GTMKAC	2 cut(s)	1015, 1464
AccII	CGCG	1 cut(s)	378
AciI	CCGC	2 cut(s)	713, 1288
AclWI	GGATC	6 cut(s)	307, 495, 549, 839, 852, 1686
AcsI	RAATTY	3 cut(s)	463, 986, 1056
AcuI	CTGAAG	2 cut(s)	284, 306
AfaI	GTAC	4 cut(s)	1022, 1126, 1266, 1796
AfiI	CCNNNNNNNGG	1 cut(s)	644
AflIII	ACRYGT	1 cut(s)	1537
AgsI	TTSAA	4 cut(s)	14, 134, 986, 1760
AjnI	CCWGG	3 cut(s)	349, 637, 1411
AloI	GAACNNNNNNTCC	2 cut(s)	1183, 1215
Alw21I	GWGCWC	1 cut(s)	1071
Alw26I	GTCTC	1 cut(s)	47
Alw44I	GTGCAC	1 cut(s)	1067
AlwI	GGATC	6 cut(s)	307, 495, 549, 839, 852, 1686
AlwNI	CAGNNNCTG	1 cut(s)	1436
Ama87I	CYCGRG	3 cut(s)	1449, 1605, 1779
AoxI	GGCC	1 cut(s)	965
ApaLI	GTGCAC	1 cut(s)	1067
ApeKI	GCWGC	4 cut(s)	158, 743, 1172, 1285
ApoI	RAATTY	3 cut(s)	463, 986, 1056
ArsI	GACNNNNNNTTYG	2 cut(s)	971, 1003
Asp700I	GAANNNNTTC	2 cut(s)	213, 990
AspLEI	GCGC	2 cut(s)	1076, 1532
AspS9I	GGNCC	4 cut(s)	632, 1726, 1924, 1988
AsuHPI	GGTGA	2 cut(s)	542, 1562
AsuII	TTCGAA	1 cut(s)	1108
AvaI	CYCGRG	3 cut(s)	1449, 1605, 1779
AvaII	GGWCC	4 cut(s)	632, 1726, 1924, 1988
BaeGI	GKGCMC	1 cut(s)	1071
BaeI	ACNNNNGTAYC	2 cut(s)	1416, 1449
BamHI	GGATCC	1 cut(s)	844
BanI	GGYRCC	1 cut(s)	346
BbsI	GAAGAC	5 cut(s)	14, 183, 1111, 1224, 1302
Bbv12I	GWGCWC	1 cut(s)	1071
BbvI	GCAGC	4 cut(s)	145, 730, 1184, 1297
BccI	CCATC	6 cut(s)	84, 884, 1559, 1606, 1691, 1979
BciT130I	CCWGG	3 cut(s)	351, 639, 1413
BcoDI	GTCTC	1 cut(s)	47
BfaI	CTAG	2 cut(s)	245, 849
BfmI	CTRYAG	1 cut(s)	1428
BisI	GCNGC	4 cut(s)	159, 744, 1173, 1286
BlsI	GCNGC	4 cut(s)	160, 745, 1174, 1287
Bme1390I	CCNGG	3 cut(s)	351, 639, 1413
Bme18I	GGWCC	4 cut(s)	632, 1726, 1924, 1988
BmeT110I	CYCGRG	3 cut(s)	1449, 1605, 1779
BmgT120I	GGNCC	4 cut(s)	632, 1726, 1924, 1988
BmiI	GGNNCC	3 cut(s)	348, 846, 1728
BmrFI	CCNGG	3 cut(s)	351, 639, 1413
BmsI	GCATC	4 cut(s)	378, 805, 1027, 1488
BpiI	GAAGAC	5 cut(s)	14, 183, 1111, 1224, 1302
BplI	GAGNNNNNCTC	4 cut(s)	254, 286, 769, 801
BpmI	CTGGAG	2 cut(s)	300, 1917
Bpu14I	TTCGAA	1 cut(s)	1108
BpuEI	CTTGAG	3 cut(s)	256, 1271, 1618
BsaBI	GATNNNNATC	1 cut(s)	947
BsaJI	CCNNGG	3 cut(s)	350, 510, 1468
BsaXI	ACNNNNNCTCC	2 cut(s)	273, 303
Bsc4I	CCNNNNNNNGG	1 cut(s)	644
Bse1I	ACTGG	5 cut(s)	649, 913, 1391, 1900, 1934
Bse8I	GATNNNNATC	1 cut(s)	947
BseBI	CCWGG	3 cut(s)	351, 639, 1413
BseDI	CCNNGG	3 cut(s)	350, 510, 1468
BseGI	GGATG	4 cut(s)	37, 811, 1234, 1990
BseJI	GATNNNNATC	1 cut(s)	947
BseLI	CCNNNNNNNGG	1 cut(s)	644
BseMII	CTCAG	5 cut(s)	141, 943, 1266, 1758, 1857
BseNI	ACTGG	5 cut(s)	649, 913, 1391, 1900, 1934
BseSI	GKGCMC	1 cut(s)	1071
BseXI	GCAGC	4 cut(s)	145, 730, 1184, 1297
BsgI	GTGCAG	2 cut(s)	2025, 2033
Bsh1236I	CGCG	1 cut(s)	378
BshFI	GGCC	1 cut(s)	967
BshNI	GGYRCC	1 cut(s)	346
BsiHKAI	GWGCWC	1 cut(s)	1071
BsiHKCI	CYCGRG	3 cut(s)	1449, 1605, 1779
BsiWI	CGTACG	1 cut(s)	1124
BslFI	GGGAC	1 cut(s)	90
BslI	CCNNNNNNNGG	1 cut(s)	644
BsmAI	GTCTC	1 cut(s)	47
BsmFI	GGGAC	1 cut(s)	90
BsnI	GGCC	1 cut(s)	967
BsoBI	CYCGRG	3 cut(s)	1449, 1605, 1779
Bsp119I	TTCGAA	1 cut(s)	1108
Bsp1286I	GDGCHC	1 cut(s)	1071
Bsp1407I	TGTACA	1 cut(s)	1020
BspACI	CCGC	2 cut(s)	713, 1288
BspANI	GGCC	1 cut(s)	967
BspCNI	CTCAG	5 cut(s)	142, 942, 1267, 1759, 1858
BspFNI	CGCG	1 cut(s)	378
BspHI	TCATGA	1 cut(s)	1339
BspLI	GGNNCC	3 cut(s)	348, 846, 1728
BspMAI	CTGCAG	1 cut(s)	1432
BspPI	GGATC	6 cut(s)	307, 495, 549, 839, 852, 1686
BspQI	GCTCTTC	2 cut(s)	850, 1275
BspT104I	TTCGAA	1 cut(s)	1108
BspT107I	GGYRCC	1 cut(s)	346
BsrGI	TGTACA	1 cut(s)	1020
BsrI	ACTGG	5 cut(s)	649, 913, 1391, 1900, 1934
BssECI	CCNNGG	3 cut(s)	350, 510, 1468
BssT1I	CCWWGG	2 cut(s)	510, 1468
Bst2UI	CCWGG	3 cut(s)	351, 639, 1413
Bst4CI	ACNGT	6 cut(s)	20, 1013, 1020, 1129, 1691, 1992
Bst6I	CTCTTC	4 cut(s)	850, 1275, 1567, 1974
BstAPI	GCANNNNNTGC	1 cut(s)	1051
BstAUI	TGTACA	1 cut(s)	1020
BstBI	TTCGAA	1 cut(s)	1108
BstC8I	GCNNGC	3 cut(s)	834, 1332, 1392
BstDEI	CTNAG	6 cut(s)	150, 408, 929, 1275, 1767, 1866
BstF5I	GGATG	4 cut(s)	37, 811, 1234, 1990
BstFNI	CGCG	1 cut(s)	378
BstHHI	GCGC	2 cut(s)	1076, 1532
BstMAI	GTCTC	1 cut(s)	47
BstMWI	GCNNNNNNNGC	4 cut(s)	710, 878, 918, 1051
BstNI	CCWGG	3 cut(s)	351, 639, 1413
BstNSI	RCATGY	2 cut(s)	836, 1394
BstSCI	CCNGG	3 cut(s)	349, 637, 1411
BstSFI	CTRYAG	1 cut(s)	1428
BstSLI	GKGCMC	1 cut(s)	1071
BstUI	CGCG	1 cut(s)	378
BstV1I	GCAGC	4 cut(s)	145, 730, 1184, 1297
BstV2I	GAAGAC	5 cut(s)	14, 183, 1111, 1224, 1302
BstX2I	RGATCY	4 cut(s)	312, 500, 541, 844
BstYI	RGATCY	4 cut(s)	312, 500, 541, 844
BsuRI	GGCC	1 cut(s)	967
BtgZI	GCGATG	1 cut(s)	1835
BtsCI	GGATG	4 cut(s)	37, 811, 1234, 1990
BtsI	GCAGTG	1 cut(s)	2045
BtsIMutI	CAGTG	2 cut(s)	1191, 2045
Cac8I	GCNNGC	3 cut(s)	834, 1332, 1392
CaiI	CAGNNNCTG	1 cut(s)	1436
CciI	TCATGA	1 cut(s)	1339
CfoI	GCGC	2 cut(s)	1076, 1532
Cfr13I	GGNCC	4 cut(s)	632, 1726, 1924, 1988
Csp6I	GTAC	4 cut(s)	1021, 1125, 1265, 1795
CviAII	CATG	9 cut(s)	505, 833, 1258, 1340, 1391, 1492, 1517, 1858, 1939
CviQI	GTAC	4 cut(s)	1021, 1125, 1265, 1795
DdeI	CTNAG	6 cut(s)	150, 408, 929, 1275, 1767, 1866
DraI	TTTAAA	1 cut(s)	1063
DrdI	GACNNNNNNGTC	1 cut(s)	1689
DseDI	GACNNNNNNGTC	1 cut(s)	1689
Eam1104I	CTCTTC	4 cut(s)	850, 1275, 1567, 1974
EarI	CTCTTC	4 cut(s)	850, 1275, 1567, 1974
Eco130I	CCWWGG	2 cut(s)	510, 1468
Eco32I	GATATC	2 cut(s)	238, 2018
Eco47I	GGWCC	4 cut(s)	632, 1726, 1924, 1988
Eco57I	CTGAAG	2 cut(s)	284, 306
Eco88I	CYCGRG	3 cut(s)	1449, 1605, 1779
EcoO109I	RGGNCCY	2 cut(s)	1726, 1924
EcoRII	CCWGG	3 cut(s)	349, 637, 1411
EcoRV	GATATC	2 cut(s)	238, 2018
EcoT14I	CCWWGG	2 cut(s)	510, 1468
EcoT22I	ATGCAT	1 cut(s)	1396
ErhI	CCWWGG	2 cut(s)	510, 1468
FaeI	CATG	9 cut(s)	508, 836, 1261, 1343, 1394, 1495, 1520, 1861, 1942
FalI	AAGNNNNNCTT	4 cut(s)	279, 311, 1294, 1326
FaqI	GGGAC	1 cut(s)	90
FatI	CATG	9 cut(s)	504, 832, 1257, 1339, 1390, 1491, 1516, 1857, 1938
FblI	GTMKAC	2 cut(s)	1015, 1464
Fnu4HI	GCNGC	4 cut(s)	159, 744, 1173, 1286
FokI	GGATG	4 cut(s)	44, 818, 1241, 1997
Fsp4HI	GCNGC	4 cut(s)	159, 744, 1173, 1286
FspBI	CTAG	2 cut(s)	245, 849
GlaI	GCGC	2 cut(s)	1075, 1531
GluI	GCNGC	4 cut(s)	159, 744, 1173, 1286
GsuI	CTGGAG	2 cut(s)	300, 1917
HaeIII	GGCC	1 cut(s)	967
HhaI	GCGC	2 cut(s)	1076, 1532
Hin1II	CATG	9 cut(s)	508, 836, 1261, 1343, 1394, 1495, 1520, 1861, 1942
Hin6I	GCGC	2 cut(s)	1074, 1530
HinP1I	GCGC	2 cut(s)	1074, 1530
HincII	GTYRAC	2 cut(s)	1016, 1788
HindII	GTYRAC	2 cut(s)	1016, 1788
HindIII	AAGCTT	1 cut(s)	137
HinfI	GANTC	4 cut(s)	380, 1156, 1738, 1753
HphI	GGTGA	2 cut(s)	542, 1562
Hpy166II	GTNNAC	6 cut(s)	720, 1016, 1069, 1265, 1465, 1788
Hpy188I	TCNGA	8 cut(s)	151, 303, 932, 1155, 1204, 1315, 1768, 1968
Hpy8I	GTNNAC	6 cut(s)	720, 1016, 1069, 1265, 1465, 1788
Hpy99I	CGWCG	1 cut(s)	1017
HpyAV	CCTTC	7 cut(s)	37, 203, 322, 822, 892, 1414, 1915
HpyCH4III	ACNGT	6 cut(s)	20, 1013, 1020, 1129, 1691, 1992
HpyCH4IV	ACGT	3 cut(s)	1003, 1198, 1537
HpyF10VI	GCNNNNNNNGC	4 cut(s)	710, 878, 918, 1051
HpyF3I	CTNAG	6 cut(s)	150, 408, 929, 1275, 1767, 1866
HpySE526I	ACGT	3 cut(s)	1003, 1198, 1537
Hsp92II	CATG	9 cut(s)	508, 836, 1261, 1343, 1394, 1495, 1520, 1861, 1942
HspAI	GCGC	2 cut(s)	1074, 1530
LguI	GCTCTTC	2 cut(s)	850, 1275
LmnI	GCTCC	2 cut(s)	281, 790
Lsp1109I	GCAGC	4 cut(s)	145, 730, 1184, 1297
LweI	GCATC	4 cut(s)	378, 805, 1027, 1488
MaeI	CTAG	2 cut(s)	245, 849
MaeII	ACGT	3 cut(s)	1003, 1198, 1537
MaeIII	GTNAC	5 cut(s)	46, 196, 354, 1349, 1954
MfeI	CAATTG	1 cut(s)	1244
MflI	RGATCY	4 cut(s)	312, 500, 541, 844
MhlI	GDGCHC	1 cut(s)	1071
MlyI	GAGTC	2 cut(s)	389, 1747
MmeI	TCCRAC	1 cut(s)	460
Mph1103I	ATGCAT	1 cut(s)	1396
MroXI	GAANNNNTTC	2 cut(s)	213, 990
MseI	TTAA	2 cut(s)	1062, 2059
MslI	CAYNNNNRTG	1 cut(s)	1496
MspA1I	CMGCKG	1 cut(s)	1288
MspR9I	CCNGG	3 cut(s)	351, 639, 1413
MunI	CAATTG	1 cut(s)	1244
MvaI	CCWGG	3 cut(s)	351, 639, 1413
MvnI	CGCG	1 cut(s)	378
MwoI	GCNNNNNNNGC	4 cut(s)	710, 878, 918, 1051
NlaIII	CATG	9 cut(s)	508, 836, 1261, 1343, 1394, 1495, 1520, 1861, 1942
NlaIV	GGNNCC	3 cut(s)	348, 846, 1728
NmuCI	GTSAC	1 cut(s)	1349
NsiI	ATGCAT	1 cut(s)	1396
NspI	RCATGY	2 cut(s)	836, 1394
NspV	TTCGAA	1 cut(s)	1108
PaeI	GCATGC	2 cut(s)	836, 1394
PaeR7I	CTCGAG	1 cut(s)	1605
PagI	TCATGA	1 cut(s)	1339
PciSI	GCTCTTC	2 cut(s)	850, 1275
PcsI	WCGNNNNNNNCGW	2 cut(s)	1000, 1009
PdmI	GAANNNNTTC	2 cut(s)	213, 990
PfeI	GAWTC	2 cut(s)	1156, 1738
Pfl23II	CGTACG	1 cut(s)	1124
PfoI	TCCNGGA	1 cut(s)	637
PkrI	GCNGC	4 cut(s)	160, 745, 1174, 1287
PleI	GAGTC	2 cut(s)	388, 1747
PpsI	GAGTC	2 cut(s)	388, 1747
PpuMI	RGGWCCY	2 cut(s)	1726, 1924
Psp5II	RGGWCCY	2 cut(s)	1726, 1924
Psp6I	CCWGG	3 cut(s)	349, 637, 1411
PspGI	CCWGG	3 cut(s)	349, 637, 1411
PspLI	CGTACG	1 cut(s)	1124
PspN4I	GGNNCC	3 cut(s)	348, 846, 1728
PspPI	GGNCC	4 cut(s)	632, 1726, 1924, 1988
PspPPI	RGGWCCY	2 cut(s)	1726, 1924
PstI	CTGCAG	1 cut(s)	1432
PstNI	CAGNNNCTG	1 cut(s)	1436
PsuI	RGATCY	4 cut(s)	312, 500, 541, 844
RsaI	GTAC	4 cut(s)	1022, 1126, 1266, 1796
RsaNI	GTAC	4 cut(s)	1021, 1125, 1265, 1795
RseI	CAYNNNNRTG	1 cut(s)	1496
SalI	GTCGAC	1 cut(s)	1014
SapI	GCTCTTC	2 cut(s)	850, 1275
SaqAI	TTAA	2 cut(s)	1062, 2059
SatI	GCNGC	4 cut(s)	159, 744, 1173, 1286
Sau96I	GGNCC	4 cut(s)	632, 1726, 1924, 1988
SchI	GAGTC	2 cut(s)	389, 1747
ScrFI	CCNGG	3 cut(s)	351, 639, 1413
SduI	GDGCHC	1 cut(s)	1071
SfaNI	GCATC	4 cut(s)	378, 805, 1027, 1488
SfcI	CTRYAG	1 cut(s)	1428
Sfr274I	CTCGAG	1 cut(s)	1605
SfuI	TTCGAA	1 cut(s)	1108
SinI	GGWCC	4 cut(s)	632, 1726, 1924, 1988
SlaI	CTCGAG	1 cut(s)	1605
SmiMI	CAYNNNNRTG	1 cut(s)	1496
SmlI	CTYRAG	4 cut(s)	271, 1250, 1605, 1633
SmoI	CTYRAG	4 cut(s)	271, 1250, 1605, 1633
SphI	GCATGC	2 cut(s)	836, 1394
SsiI	CCGC	2 cut(s)	713, 1288
SspMI	CTAG	2 cut(s)	245, 849
StyD4I	CCNGG	3 cut(s)	349, 637, 1411
StyI	CCWWGG	2 cut(s)	510, 1468
TaaI	ACNGT	6 cut(s)	20, 1013, 1020, 1129, 1691, 1992
TaiI	ACGT	3 cut(s)	1006, 1201, 1540
TaqI	TCGA	7 cut(s)	888, 994, 1015, 1108, 1606, 1681, 1944
TatI	WGTACW	2 cut(s)	1020, 1264
TfiI	GAWTC	2 cut(s)	1156, 1738
Tru1I	TTAA	2 cut(s)	1062, 2059
Tru9I	TTAA	2 cut(s)	1062, 2059
TscAI	CASTG	2 cut(s)	1191, 2052
TseFI	GTSAC	1 cut(s)	1349
TseI	GCWGC	4 cut(s)	158, 743, 1172, 1285
Tsp45I	GTSAC	1 cut(s)	1349
TspGWI	ACGGA	1 cut(s)	1112
TspRI	CASTG	2 cut(s)	1191, 2052
VneI	GTGCAC	1 cut(s)	1067
VpaK11BI	GGWCC	4 cut(s)	632, 1726, 1924, 1988
XapI	RAATTY	3 cut(s)	463, 986, 1056
XceI	RCATGY	2 cut(s)	836, 1394
XhoI	CTCGAG	1 cut(s)	1605
XmiI	GTMKAC	2 cut(s)	1015, 1464
XmnI	GAANNNNTTC	2 cut(s)	213, 990
XspI	CTAG	2 cut(s)	245, 849
Zsp2I	ATGCAT	1 cut(s)	1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.