ATP-dependent zinc metalloprotease FTSH 12
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37960 AT2G37960 AT3G54060 AT3G54060 |
| fragaria_vesca | FvH4_3g14760 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360 |
| malus_domestica | MD04G1090200.v1.1 MD04G1143500.v1.1 MD12G1157700.v1.1 |
| prunus_persica | Prupe.6G268000_v2.0.a1 Prupe.6G268000_v2.0.a1 |
| pyrus_communis | pycom04g13020 pycom08g09900 pycom09g03010 pycom12g14980 |
| rosa_chinensis | RchiOBHm_Chr1g0324481 RchiOBHm_Chr3g0464181 RchiOBHm_Chr5g0060551 |
| rosa_laevigata | RLG00000003414 RLG00000014209 RLG00000017801 RLG00000024717 RLG00000030652 RLG00000030659 |
| rosa_multiflora | Rmu_sc0001619.1_g000001 Rmu_sc0006492.1_g000022 Rmu_sc0032722.1_g000001 Rmu_sc0041392.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00415950 |
| rosa_rugosa | Rorug03G0070900 |
| rosa_samantha | Rh1AG205500 Rh1DG068100 Rh3BG132400 Rh3CG134600 Rh3DG133600 Rh5BG170400 Rh6AG098500 Rh6CG247400 Rh6DG081300 Rh7CG209500 |
| rosa_wichuraiana | Rw3G010830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 127 |
| AcsI | RAATTY | 1 cut(s) | 98 |
| AfaI | GTAC | 1 cut(s) | 134 |
| AflIII | ACRYGT | 1 cut(s) | 115 |
| AgsI | TTSAA | 1 cut(s) | 98 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 50 |
| AjiI | CACGTC | 1 cut(s) | 116 |
| AluBI | AGCT | 1 cut(s) | 50 |
| AluI | AGCT | 1 cut(s) | 50 |
| ApoI | RAATTY | 1 cut(s) | 98 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 83, 115 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 102 |
| BfaI | CTAG | 1 cut(s) | 111 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 50 |
| BmgBI | CACGTC | 1 cut(s) | 116 |
| BmsI | GCATC | 1 cut(s) | 139 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| BseMII | CTCAG | 1 cut(s) | 55 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| Bsp1407I | TGTACA | 1 cut(s) | 132 |
| Bsp143I | GATC | 2 cut(s) | 28, 107 |
| BspCNI | CTCAG | 1 cut(s) | 54 |
| BsrGI | TGTACA | 1 cut(s) | 132 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssMI | GATC | 2 cut(s) | 28, 107 |
| Bst4CI | ACNGT | 2 cut(s) | 125, 132 |
| BstAUI | TGTACA | 1 cut(s) | 132 |
| BstDEI | CTNAG | 1 cut(s) | 41 |
| BstKTI | GATC | 2 cut(s) | 31, 110 |
| BstMBI | GATC | 2 cut(s) | 28, 107 |
| BstNSI | RCATGY | 1 cut(s) | 79 |
| BtrI | CACGTC | 1 cut(s) | 116 |
| Csp6I | GTAC | 1 cut(s) | 133 |
| CviAII | CATG | 1 cut(s) | 76 |
| CviJI | RGCY | 1 cut(s) | 50 |
| CviKI_1 | RGCY | 1 cut(s) | 50 |
| CviQI | GTAC | 1 cut(s) | 133 |
| DdeI | CTNAG | 1 cut(s) | 41 |
| DpnI | GATC | 2 cut(s) | 30, 109 |
| DpnII | GATC | 2 cut(s) | 28, 107 |
| DriI | GACNNNNNGTC | 1 cut(s) | 50 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 50 |
| FaeI | CATG | 1 cut(s) | 79 |
| FaiI | YATR | 2 cut(s) | 56, 77 |
| FatI | CATG | 1 cut(s) | 75 |
| FblI | GTMKAC | 1 cut(s) | 127 |
| FspBI | CTAG | 1 cut(s) | 111 |
| FspEI | CC | 6 cut(s) | 6, 85, 93, 107, 123, 137 |
| Hin1II | CATG | 1 cut(s) | 79 |
| HincII | GTYRAC | 2 cut(s) | 121, 128 |
| HindII | GTYRAC | 2 cut(s) | 121, 128 |
| Hpy166II | GTNNAC | 3 cut(s) | 121, 128, 143 |
| Hpy188I | TCNGA | 1 cut(s) | 44 |
| Hpy188III | TCNNGA | 1 cut(s) | 111 |
| Hpy8I | GTNNAC | 3 cut(s) | 121, 128, 143 |
| Hpy99I | CGWCG | 1 cut(s) | 129 |
| HpyAV | CCTTC | 1 cut(s) | 3 |
| HpyCH4III | ACNGT | 2 cut(s) | 125, 132 |
| HpyCH4IV | ACGT | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 1 cut(s) | 152 |
| HpyF3I | CTNAG | 1 cut(s) | 41 |
| HpySE526I | ACGT | 1 cut(s) | 115 |
| Hsp92II | CATG | 1 cut(s) | 79 |
| Kzo9I | GATC | 2 cut(s) | 28, 107 |
| LpnPI | CCDG | 1 cut(s) | 6 |
| LweI | GCATC | 1 cut(s) | 139 |
| MaeI | CTAG | 1 cut(s) | 111 |
| MaeII | ACGT | 1 cut(s) | 115 |
| MalI | GATC | 2 cut(s) | 30, 109 |
| MboI | GATC | 2 cut(s) | 28, 107 |
| MluCI | AATT | 2 cut(s) | 86, 98 |
| MroXI | GAANNNNTTC | 1 cut(s) | 102 |
| NdeII | GATC | 2 cut(s) | 28, 107 |
| NlaIII | CATG | 1 cut(s) | 79 |
| NspI | RCATGY | 1 cut(s) | 79 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 112, 121 |
| PdmI | GAANNNNTTC | 1 cut(s) | 102 |
| RsaI | GTAC | 1 cut(s) | 134 |
| RsaNI | GTAC | 1 cut(s) | 133 |
| SalI | GTCGAC | 1 cut(s) | 126 |
| Sau3AI | GATC | 2 cut(s) | 28, 107 |
| SetI | ASST | 4 cut(s) | 52, 96, 118, 148 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SgeI | CNNG | 6 cut(s) | 33, 59, 88, 107, 123, 128 |
| Sse9I | AATT | 2 cut(s) | 86, 98 |
| SspMI | CTAG | 1 cut(s) | 111 |
| TaaI | ACNGT | 2 cut(s) | 125, 132 |
| TaiI | ACGT | 1 cut(s) | 118 |
| TaqI | TCGA | 2 cut(s) | 106, 127 |
| TasI | AATT | 2 cut(s) | 86, 98 |
| TatI | WGTACW | 1 cut(s) | 132 |
| TspDTI | ATGAA | 2 cut(s) | 49, 99 |
| XapI | RAATTY | 1 cut(s) | 98 |
| XbaI | TCTAGA | 1 cut(s) | 110 |
| XceI | RCATGY | 1 cut(s) | 79 |
| XmiI | GTMKAC | 1 cut(s) | 127 |
| XmnI | GAANNNNTTC | 1 cut(s) | 102 |
| XspI | CTAG | 1 cut(s) | 111 |