Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0002081

Physical Location & Seq

Genomic Coordinates Forward (+)

11156324 .. 11158910

Gene Structure 2587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG132400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGGCCAAGCAATCTAAAGCCAAGAAGTCGGAGACTCTCGGCAAGGGCACCGTCACCCCCGTCCAGATCGCCTTCCTCGTCGACCAGTACCTCTCCGATAACAGCTACTCCGAAGCCCGCTCCGTTTTCCGAACCGAAGCCTCCTCGCTCTTCTCCAAGTCCCCCATTCGAGAGGTGCCGAAGAGCTTGCTGAGTCTGTCTGAGATTCTGAACGAGTACATAGCGTTGAAGGAGCAGAAGGTGTTGCTGGACCACGAGAAGGTTCGGGTGGAGCAGGAGAAGACCAGGGTTCAGACGCTTTTGAATGGGTTGCAGAATTCCATGAACATTTACAATGCTGGTGGAAACCCCCAAATCTCCAGAGCTCCCGATGCGGCGCCGAAACAGATGCTCATGGCTCCTCAGCCTCGCCTATCTAATGGGTCTTCTGCAGTTGTTCATCCAGTGGTCACACCCACCAACACCAACATGGGGCCTGCAAATTTCTGCTCACCAATCATAAGTAACCCACCTGCAACTAAGAGAAAGGGTACCAACGCTGTTGCTGATGCCCCTCATGCTGCTAAGAGATCTCGCGGCAAAGCATCTGCCAGTAAGATTCCAAACAAAGGTGAAGGAACACTTAGAGCATCAGGTAGTGCACTTAATAACCAAGGAAGTGCCCTGCCCACTTCAGATGTTCAATCATCACTACAGAACTCTGCTCCCAGCAGCTCCTTGGTTCAGGGATCCACTGTGGCCAAATGCTTGTTCCAGCCTTCGATTTCCAATACCACCAATTCTTCTGTTCCTCAAACACCTCCACGAGCAAATTCCTCTCAAAGTGATAAATCTGTGTCTCCTGTTGAGAATTCTGGCATTTTTACCCACAGTGATAACAATTCTCCTCCTGAAATCAGTGCTAATTGCTGCACTATATTTTCATCCAAGAGAGTGACATTGACCCCTAACAAAGCTTGCTACACTGTGGAAACAAACCATTGCATTTCTTCCTCACCTGCCAAGACAAACTCGAGGATCTCAAGTAGGAGGGAGCATGTAAAAGGGAGGCTAAACTTTGATTGCTCTGATGTGCCAATGGGTTTGGACAAACCAATTACTGACGAGATTTCTACTGACAAACCAATCATTGAAGATATATCAACCCACAAACCAATCAGAGATGAAATTTCTACATCTGATTCTGAAAAGGAAGTTGATATTTTTGACATGGATATGCCCAATTTTGAAGCCCTAGGGGTGGATTTTAACTTCTCTGACATGTTAGGTGAACTAGATCTTGATTATGGAGAACTTGGTTTCACTTGTCAACCATCTTCGGGTGCTTTCATGGGAAATGTTTCAGGGTTATCTCATGAAAATCTGGATGGTAATAAGGGGGCTAATCAAGTTATGTCAGAATTTTCATCAACTGTGACAGAAGTAATATCAGAGAAGGGCACCGGTGCACAAGGACCTGATTCTATGACAACAATGAAGTCTGTAACTAAATCTATCAGAATTATAAGCCCAGTGAAAAAGCGAGGAAACTCTGTGGATCAGGAGAACTGTACTGAGATAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

521

Amino Acids

55.82

Weight (kDa)

6.73

Isoelectric Point (pI)

45.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002081)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37960 AT2G37960 AT3G54060 AT3G54060
fragaria_vesca	FvH4_3g14760 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360 FvH4_6g12360
malus_domestica	MD04G1090200.v1.1 MD04G1143500.v1.1 MD12G1157700.v1.1
prunus_persica	Prupe.6G268000_v2.0.a1 Prupe.6G268000_v2.0.a1
pyrus_communis	pycom04g13020 pycom08g09900 pycom09g03010 pycom12g14980
rosa_chinensis	RchiOBHm_Chr1g0324481 RchiOBHm_Chr3g0464181 RchiOBHm_Chr5g0060551
rosa_laevigata	RLG00000003414 RLG00000014209 RLG00000017801 RLG00000024717 RLG00000030652 RLG00000030659
rosa_multiflora	Rmu_sc0001619.1_g000001 Rmu_sc0006492.1_g000022 Rmu_sc0032722.1_g000001 Rmu_sc0041392.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415950
rosa_rugosa	Rorug03G0070900
rosa_samantha	Rh1AG205500 Rh1DG068100 Rh3BG132400 Rh3CG134600 Rh3DG133600 Rh5BG170400 Rh6AG098500 Rh6CG247400 Rh6DG081300 Rh7CG209500
rosa_wichuraiana	Rw3G010830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1505
AarI	CACCTGC	2 cut(s)	520, 1006
Acc36I	ACCTGC	2 cut(s)	520, 1006
Acc65I	GGTACC	1 cut(s)	530
AccB1I	GGYRCC	5 cut(s)	47, 175, 376, 530, 1439
AccBSI	CCGCTC	1 cut(s)	120
AccI	GTMKAC	1 cut(s)	81
AccII	CGCG	1 cut(s)	576
AciI	CCGC	3 cut(s)	118, 374, 576
AclWI	GGATC	4 cut(s)	723, 736, 1025, 1545
AcoI	YGGCCR	2 cut(s)	3, 738
AcsI	RAATTY	6 cut(s)	316, 481, 811, 850, 1167, 1400
AcuI	CTGAAG	1 cut(s)	657
AcyI	GRCGYC	1 cut(s)	377
AfaI	GTAC	4 cut(s)	89, 218, 532, 1552
AfiI	CCNNNNNNNGG	5 cut(s)	259, 471, 608, 1240, 1319
AflIII	ACRYGT	1 cut(s)	1260
AgeI	ACCGGT	1 cut(s)	1442
AgsI	TTSAA	5 cut(s)	229, 304, 683, 1133, 1229
AjnI	CCWGG	1 cut(s)	284
AjuI	GAANNNNNNNTTGG	2 cut(s)	734, 766
AluBI	AGCT	5 cut(s)	105, 186, 365, 714, 956
AluI	AGCT	5 cut(s)	105, 186, 365, 714, 956
Alw21I	GWGCWC	3 cut(s)	367, 643, 1450
Alw26I	GTCTC	2 cut(s)	26, 843
Alw44I	GTGCAC	2 cut(s)	639, 1446
AlwI	GGATC	4 cut(s)	723, 736, 1025, 1545
Ama87I	CYCGRG	1 cut(s)	1012
AoxI	GGCC	3 cut(s)	3, 473, 738
ApaLI	GTGCAC	2 cut(s)	639, 1446
ApeKI	GCWGC	3 cut(s)	560, 711, 909
ApoI	RAATTY	6 cut(s)	316, 481, 811, 850, 1167, 1400
AsiGI	ACCGGT	1 cut(s)	1442
Asp700I	GAANNNNTTC	1 cut(s)	1339
Asp718I	GGTACC	1 cut(s)	530
AspA2I	CCTAGG	1 cut(s)	1234
AspLEI	GCGC	1 cut(s)	379
AspS9I	GGNCC	3 cut(s)	250, 473, 1454
AsuHPI	GGTGA	5 cut(s)	46, 483, 623, 987, 1280
AvaI	CYCGRG	1 cut(s)	1012
AvaII	GGWCC	2 cut(s)	250, 1454
AvrII	CCTAGG	1 cut(s)	1234
BaeGI	GKGCMC	5 cut(s)	50, 643, 664, 1442, 1450
BalI	TGGCCA	2 cut(s)	5, 740
BamHI	GGATCC	1 cut(s)	728
BanI	GGYRCC	5 cut(s)	47, 175, 376, 530, 1439
BanII	GRGCYC	1 cut(s)	367
BauI	CACGAG	2 cut(s)	254, 804
BbsI	GAAGAC	2 cut(s)	287, 417
Bbv12I	GWGCWC	3 cut(s)	367, 643, 1450
BbvCI	CCTCAGC	1 cut(s)	402
BbvI	GCAGC	3 cut(s)	547, 723, 896
BccI	CCATC	2 cut(s)	1321, 1361
BcgI	CGANNNNNNTGC	4 cut(s)	169, 203, 370, 404
BciT130I	CCWGG	1 cut(s)	286
BcoDI	GTCTC	2 cut(s)	26, 843
BfaI	CTAG	2 cut(s)	1235, 1274
BfmI	CTRYAG	2 cut(s)	429, 692
BfoI	RGCGCY	1 cut(s)	380
BfuAI	ACCTGC	2 cut(s)	520, 1006
BglII	AGATCT	2 cut(s)	569, 1276
BisI	GCNGC	5 cut(s)	375, 561, 577, 712, 910
BlnI	CCTAGG	1 cut(s)	1234
BlsI	GCNGC	5 cut(s)	376, 562, 578, 713, 911
Bme1390I	CCNGG	1 cut(s)	286
Bme18I	GGWCC	2 cut(s)	250, 1454
BmeT110I	CYCGRG	1 cut(s)	1012
BmgT120I	GGNCC	3 cut(s)	250, 473, 1454
BmiI	GGNNCC	8 cut(s)	49, 177, 378, 399, 474, 532, 730, 1441
BmrFI	CCNGG	1 cut(s)	286
BmrI	ACTGGG	1 cut(s)	1505
BmsI	GCATC	5 cut(s)	361, 378, 538, 593, 638
BmuI	ACTGGG	1 cut(s)	1505
BpiI	GAAGAC	2 cut(s)	287, 417
BpmI	CTGGAG	1 cut(s)	343
Bpu10I	CCTNAGC	1 cut(s)	402
BpuEI	CTTGAG	1 cut(s)	1006
BsaHI	GRCGYC	1 cut(s)	377
BsaJI	CCNNGG	4 cut(s)	285, 652, 717, 1234
BsaWI	WCCGGW	1 cut(s)	1442
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bsc4I	CCNNNNNNNGG	5 cut(s)	259, 471, 608, 1240, 1319
Bse118I	RCCGGY	1 cut(s)	1442
Bse1I	ACTGG	4 cut(s)	85, 443, 591, 1511
Bse3DI	GCAATG	1 cut(s)	979
BseBI	CCWGG	1 cut(s)	286
BseDI	CCNNGG	4 cut(s)	285, 652, 717, 1234
BseGI	GGATG	3 cut(s)	439, 923, 1372
BseLI	CCNNNNNNNGG	5 cut(s)	259, 471, 608, 1240, 1319
BseMI	GCAATG	1 cut(s)	979
BseMII	CTCAG	4 cut(s)	182, 192, 416, 1545
BseNI	ACTGG	4 cut(s)	85, 443, 591, 1511
BseRI	GAGGAG	3 cut(s)	133, 390, 876
BseSI	GKGCMC	5 cut(s)	50, 643, 664, 1442, 1450
BseXI	GCAGC	3 cut(s)	547, 723, 896
BseYI	CCCAGC	1 cut(s)	707
BsgI	GTGCAG	1 cut(s)	895
Bsh1236I	CGCG	1 cut(s)	576
BshFI	GGCC	3 cut(s)	5, 475, 740
BshNI	GGYRCC	5 cut(s)	47, 175, 376, 530, 1439
BshTI	ACCGGT	1 cut(s)	1442
BsiHKAI	GWGCWC	3 cut(s)	367, 643, 1450
BsiHKCI	CYCGRG	1 cut(s)	1012
BsiSI	CCGG	1 cut(s)	1443
BslFI	GGGAC	1 cut(s)	145
BslI	CCNNNNNNNGG	5 cut(s)	259, 471, 608, 1240, 1319
BsmAI	GTCTC	2 cut(s)	26, 843
BsmFI	GGGAC	1 cut(s)	145
BsnI	GGCC	3 cut(s)	5, 475, 740
BsoBI	CYCGRG	1 cut(s)	1012
Bsp1286I	GDGCHC	6 cut(s)	50, 367, 643, 664, 1442, 1450
Bsp143I	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
BspACI	CCGC	3 cut(s)	118, 374, 576
BspANI	GGCC	3 cut(s)	5, 475, 740
BspCNI	CTCAG	4 cut(s)	183, 193, 415, 1546
BspFNI	CGCG	1 cut(s)	576
BspHI	TCATGA	1 cut(s)	1354
BspLI	GGNNCC	8 cut(s)	49, 177, 378, 399, 474, 532, 730, 1441
BspMAI	CTGCAG	1 cut(s)	433
BspMI	ACCTGC	2 cut(s)	520, 1006
BspPI	GGATC	4 cut(s)	723, 736, 1025, 1545
BspQI	GCTCTTC	2 cut(s)	155, 176
BspT107I	GGYRCC	5 cut(s)	47, 175, 376, 530, 1439
BsrBI	CCGCTC	1 cut(s)	120
BsrDI	GCAATG	1 cut(s)	979
BsrFI	RCCGGY	1 cut(s)	1442
BsrI	ACTGG	4 cut(s)	85, 443, 591, 1511
BssAI	RCCGGY	1 cut(s)	1442
BssECI	CCNNGG	4 cut(s)	285, 652, 717, 1234
BssMI	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
BssNI	GRCGYC	1 cut(s)	377
BssSI	CACGAG	2 cut(s)	254, 804
BssT1I	CCWWGG	3 cut(s)	652, 717, 1234
Bst2BI	CACGAG	2 cut(s)	254, 804
Bst2UI	CCWGG	1 cut(s)	286
Bst4CI	ACNGT	6 cut(s)	52, 736, 872, 967, 1414, 1550
Bst6I	CTCTTC	2 cut(s)	155, 176
BstACI	GRCGYC	1 cut(s)	377
BstC8I	GCNNGC	4 cut(s)	118, 188, 477, 958
BstDEI	CTNAG	7 cut(s)	191, 201, 402, 519, 564, 623, 1554
BstF5I	GGATG	3 cut(s)	439, 923, 1372
BstFNI	CGCG	1 cut(s)	576
BstH2I	RGCGCY	1 cut(s)	380
BstHHI	GCGC	1 cut(s)	379
BstKTI	GATC	6 cut(s)	69, 572, 731, 1020, 1279, 1540
BstMAI	GTCTC	2 cut(s)	26, 843
BstMBI	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
BstMWI	GCNNNNNNNGC	2 cut(s)	371, 557
BstNI	CCWGG	1 cut(s)	286
BstNSI	RCATGY	2 cut(s)	1040, 1264
BstSCI	CCNGG	1 cut(s)	284
BstSFI	CTRYAG	2 cut(s)	429, 692
BstSLI	GKGCMC	5 cut(s)	50, 643, 664, 1442, 1450
BstUI	CGCG	1 cut(s)	576
BstV1I	GCAGC	3 cut(s)	547, 723, 896
BstV2I	GAAGAC	2 cut(s)	287, 417
BstX2I	RGATCY	4 cut(s)	569, 728, 1017, 1276
BstYI	RGATCY	4 cut(s)	569, 728, 1017, 1276
BsuRI	GGCC	3 cut(s)	5, 475, 740
BtsCI	GGATG	3 cut(s)	439, 923, 1372
BtsIMutI	CAGTG	6 cut(s)	450, 732, 877, 904, 963, 1518
BveI	ACCTGC	2 cut(s)	520, 1006
Cac8I	GCNNGC	4 cut(s)	118, 188, 477, 958
CciI	TCATGA	1 cut(s)	1354
CfoI	GCGC	1 cut(s)	379
Cfr10I	RCCGGY	1 cut(s)	1442
Cfr13I	GGNCC	3 cut(s)	250, 473, 1454
CseI	GACGC	1 cut(s)	304
Csp6I	GTAC	4 cut(s)	88, 217, 531, 1551
CspAI	ACCGGT	1 cut(s)	1442
CspCI	CAANNNNNGTGG	2 cut(s)	322, 357
CviAII	CATG	9 cut(s)	322, 394, 469, 557, 1037, 1210, 1261, 1330, 1355
CviQI	GTAC	4 cut(s)	88, 217, 531, 1551
DdeI	CTNAG	7 cut(s)	191, 201, 402, 519, 564, 623, 1554
DinI	GGCGCC	1 cut(s)	378
DpnI	GATC	6 cut(s)	68, 571, 730, 1019, 1278, 1539
DpnII	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
EaeI	YGGCCR	2 cut(s)	3, 738
Eam1104I	CTCTTC	2 cut(s)	155, 176
EarI	CTCTTC	2 cut(s)	155, 176
Ecl136II	GAGCTC	1 cut(s)	365
Eco130I	CCWWGG	3 cut(s)	652, 717, 1234
Eco24I	GRGCYC	1 cut(s)	367
Eco47I	GGWCC	2 cut(s)	250, 1454
Eco53kI	GAGCTC	1 cut(s)	365
Eco57I	CTGAAG	1 cut(s)	657
Eco88I	CYCGRG	1 cut(s)	1012
EcoICRI	GAGCTC	1 cut(s)	365
EcoO109I	RGGNCCY	2 cut(s)	473, 1454
EcoRI	GAATTC	2 cut(s)	316, 850
EcoRII	CCWGG	1 cut(s)	284
EcoT14I	CCWWGG	3 cut(s)	652, 717, 1234
EcoT38I	GRGCYC	1 cut(s)	367
EgeI	GGCGCC	1 cut(s)	378
EheI	GGCGCC	1 cut(s)	378
ErhI	CCWWGG	3 cut(s)	652, 717, 1234
FaeI	CATG	9 cut(s)	325, 397, 472, 560, 1040, 1213, 1264, 1333, 1358
FalI	AAGNNNNNCTT	2 cut(s)	606, 638
FaqI	GGGAC	1 cut(s)	145
FatI	CATG	9 cut(s)	321, 393, 468, 556, 1036, 1209, 1260, 1329, 1354
FauI	CCCGC	1 cut(s)	125
FblI	GTMKAC	1 cut(s)	81
Fnu4HI	GCNGC	5 cut(s)	375, 561, 577, 712, 910
FokI	GGATG	3 cut(s)	426, 910, 1379
FriOI	GRGCYC	1 cut(s)	367
Fsp4HI	GCNGC	5 cut(s)	375, 561, 577, 712, 910
FspBI	CTAG	2 cut(s)	1235, 1274
GlaI	GCGC	1 cut(s)	378
GluI	GCNGC	5 cut(s)	375, 561, 577, 712, 910
GsaI	CCCAGC	1 cut(s)	711
GsuI	CTGGAG	1 cut(s)	343
HaeII	RGCGCY	1 cut(s)	380
HaeIII	GGCC	3 cut(s)	5, 475, 740
HapII	CCGG	1 cut(s)	1443
HgaI	GACGC	1 cut(s)	304
HhaI	GCGC	1 cut(s)	379
Hin1I	GRCGYC	1 cut(s)	377
Hin1II	CATG	9 cut(s)	325, 397, 472, 560, 1040, 1213, 1264, 1333, 1358
Hin6I	GCGC	1 cut(s)	377
HinP1I	GCGC	1 cut(s)	377
HincII	GTYRAC	2 cut(s)	82, 1310
HindII	GTYRAC	2 cut(s)	82, 1310
HindIII	AAGCTT	1 cut(s)	954
HinfI	GANTC	6 cut(s)	34, 193, 205, 598, 1181, 1460
HpaII	CCGG	1 cut(s)	1443
HphI	GGTGA	5 cut(s)	46, 483, 623, 987, 1280
Hpy166II	GTNNAC	5 cut(s)	82, 641, 1271, 1310, 1448
Hpy188III	TCNNGA	9 cut(s)	64, 170, 360, 368, 890, 1280, 1355, 1364, 1541
Hpy8I	GTNNAC	5 cut(s)	82, 641, 1271, 1310, 1448
Hpy99I	CGWCG	1 cut(s)	83
HpyAV	CCTTC	7 cut(s)	82, 223, 232, 253, 608, 768, 1429
HpyCH4III	ACNGT	6 cut(s)	52, 736, 872, 967, 1414, 1550
HpyCH4V	TGCA	8 cut(s)	313, 431, 479, 515, 641, 912, 984, 1448
HpyF10VI	GCNNNNNNNGC	2 cut(s)	371, 557
HpyF3I	CTNAG	7 cut(s)	191, 201, 402, 519, 564, 623, 1554
Hsp92I	GRCGYC	1 cut(s)	377
Hsp92II	CATG	9 cut(s)	325, 397, 472, 560, 1040, 1213, 1264, 1333, 1358
HspAI	GCGC	1 cut(s)	377
KasI	GGCGCC	1 cut(s)	376
KpnI	GGTACC	1 cut(s)	534
Kzo9I	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
LguI	GCTCTTC	2 cut(s)	155, 176
LmnI	GCTCC	8 cut(s)	125, 232, 271, 370, 403, 709, 719, 1033
Lsp1109I	GCAGC	3 cut(s)	547, 723, 896
LweI	GCATC	5 cut(s)	361, 378, 538, 593, 638
MaeI	CTAG	2 cut(s)	1235, 1274
MaeIII	GTNAC	6 cut(s)	52, 448, 503, 934, 1414, 1483
MalI	GATC	6 cut(s)	68, 571, 730, 1019, 1278, 1539
MbiI	CCGCTC	1 cut(s)	120
MboI	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
MboII	GAAGA	8 cut(s)	142, 193, 292, 417, 774, 981, 1145, 1308
MflI	RGATCY	4 cut(s)	569, 728, 1017, 1276
MhlI	GDGCHC	6 cut(s)	50, 367, 643, 664, 1442, 1450
MlsI	TGGCCA	2 cut(s)	5, 740
MluNI	TGGCCA	2 cut(s)	5, 740
Mly113I	GGCGCC	1 cut(s)	377
MlyI	GAGTC	2 cut(s)	28, 202
MmeI	TCCRAC	1 cut(s)	9
Mox20I	TGGCCA	2 cut(s)	5, 740
MroXI	GAANNNNTTC	1 cut(s)	1339
MscI	TGGCCA	2 cut(s)	5, 740
MseI	TTAA	2 cut(s)	645, 1248
MslI	CAYNNNNRTG	2 cut(s)	467, 1214
Msp20I	TGGCCA	2 cut(s)	5, 740
MspI	CCGG	1 cut(s)	1443
MspR9I	CCNGG	1 cut(s)	286
MvaI	CCWGG	1 cut(s)	286
MvnI	CGCG	1 cut(s)	576
MwoI	GCNNNNNNNGC	2 cut(s)	371, 557
NarI	GGCGCC	1 cut(s)	377
NdeII	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
NlaIII	CATG	9 cut(s)	325, 397, 472, 560, 1040, 1213, 1264, 1333, 1358
NlaIV	GGNNCC	8 cut(s)	49, 177, 378, 399, 474, 532, 730, 1441
NmeAIII	GCCGAG	1 cut(s)	18
NmuCI	GTSAC	4 cut(s)	52, 448, 934, 1414
NspI	RCATGY	2 cut(s)	1040, 1264
PaeR7I	CTCGAG	1 cut(s)	1012
PagI	TCATGA	1 cut(s)	1354
PaqCI	CACCTGC	2 cut(s)	520, 1006
PciI	ACATGT	1 cut(s)	1260
PciSI	GCTCTTC	2 cut(s)	155, 176
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PdmI	GAANNNNTTC	1 cut(s)	1339
PfeI	GAWTC	4 cut(s)	205, 598, 1181, 1460
PinAI	ACCGGT	1 cut(s)	1442
PkrI	GCNGC	5 cut(s)	376, 562, 578, 713, 911
PleI	GAGTC	2 cut(s)	28, 201
PluTI	GGCGCC	1 cut(s)	380
PpsI	GAGTC	2 cut(s)	28, 201
PpuMI	RGGWCCY	1 cut(s)	1454
PscI	ACATGT	1 cut(s)	1260
PsiI	TTATAA	1 cut(s)	1505
Psp124BI	GAGCTC	1 cut(s)	367
Psp5II	RGGWCCY	1 cut(s)	1454
Psp6I	CCWGG	1 cut(s)	284
PspFI	CCCAGC	1 cut(s)	707
PspGI	CCWGG	1 cut(s)	284
PspN4I	GGNNCC	8 cut(s)	49, 177, 378, 399, 474, 532, 730, 1441
PspPI	GGNCC	3 cut(s)	250, 473, 1454
PspPPI	RGGWCCY	1 cut(s)	1454
PspXI	VCTCGAGB	1 cut(s)	1012
PstI	CTGCAG	1 cut(s)	433
PsuI	RGATCY	4 cut(s)	569, 728, 1017, 1276
RsaI	GTAC	4 cut(s)	89, 218, 532, 1552
RsaNI	GTAC	4 cut(s)	88, 217, 531, 1551
RseI	CAYNNNNRTG	2 cut(s)	467, 1214
SacI	GAGCTC	1 cut(s)	367
SalI	GTCGAC	1 cut(s)	80
SapI	GCTCTTC	2 cut(s)	155, 176
SaqAI	TTAA	2 cut(s)	645, 1248
SatI	GCNGC	5 cut(s)	375, 561, 577, 712, 910
Sau3AI	GATC	6 cut(s)	66, 569, 728, 1017, 1276, 1537
Sau96I	GGNCC	3 cut(s)	250, 473, 1454
SchI	GAGTC	2 cut(s)	28, 202
ScrFI	CCNGG	1 cut(s)	286
SduI	GDGCHC	6 cut(s)	50, 367, 643, 664, 1442, 1450
SfaNI	GCATC	5 cut(s)	361, 378, 538, 593, 638
SfcI	CTRYAG	2 cut(s)	429, 692
SfoI	GGCGCC	1 cut(s)	378
Sfr274I	CTCGAG	1 cut(s)	1012
SgrAI	CRCCGGYG	1 cut(s)	1442
SinI	GGWCC	2 cut(s)	250, 1454
SlaI	CTCGAG	1 cut(s)	1012
SmiMI	CAYNNNNRTG	2 cut(s)	467, 1214
SmlI	CTYRAG	2 cut(s)	1012, 1021
SmoI	CTYRAG	2 cut(s)	1012, 1021
SsiI	CCGC	3 cut(s)	118, 374, 576
SspDI	GGCGCC	1 cut(s)	376
SspMI	CTAG	2 cut(s)	1235, 1274
SstI	GAGCTC	1 cut(s)	367
StyD4I	CCNGG	1 cut(s)	284
StyI	CCWWGG	3 cut(s)	652, 717, 1234
TaaI	ACNGT	6 cut(s)	52, 736, 872, 967, 1414, 1550
TaqI	TCGA	4 cut(s)	81, 169, 761, 1013
TatI	WGTACW	2 cut(s)	216, 1550
TauI	GCSGC	2 cut(s)	377, 579
TfiI	GAWTC	4 cut(s)	205, 598, 1181, 1460
Tru1I	TTAA	2 cut(s)	645, 1248
Tru9I	TTAA	2 cut(s)	645, 1248
TscAI	CASTG	6 cut(s)	450, 739, 877, 904, 970, 1518
TseFI	GTSAC	4 cut(s)	52, 448, 934, 1414
TseI	GCWGC	3 cut(s)	560, 711, 909
Tsp45I	GTSAC	4 cut(s)	52, 448, 934, 1414
TspDTI	ATGAA	8 cut(s)	338, 428, 912, 1179, 1318, 1371, 1395, 1490
TspGWI	ACGGA	1 cut(s)	112
TspRI	CASTG	6 cut(s)	450, 739, 877, 904, 970, 1518
VneI	GTGCAC	2 cut(s)	639, 1446
VpaK11BI	GGWCC	2 cut(s)	250, 1454
XapI	RAATTY	6 cut(s)	316, 481, 811, 850, 1167, 1400
XceI	RCATGY	2 cut(s)	1040, 1264
XcmI	CCANNNNNNNNNTGG	2 cut(s)	466, 715
XhoI	CTCGAG	1 cut(s)	1012
XmaJI	CCTAGG	1 cut(s)	1234
XmiI	GTMKAC	1 cut(s)	81
XmnI	GAANNNNTTC	1 cut(s)	1339
XspI	CTAG	2 cut(s)	1235, 1274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.