Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006073

Physical Location & Seq

Genomic Coordinates Reverse (-)

30111497 .. 30114010

Gene Structure 2514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G80050.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 579 bp

ATGTTTGCCGTGGAGAATGGGTTGCAGGGAGACCCGAGATTAAAGGCCATCTCCGACGCCATTCGTGTCATTCCTCACTTCCCCAAGACTGGGATCATGTTTCAGGACATAACAACGTTGTTGCTGGATCCAGTTGCCTTTAAACATGTCGTCGACATCTTCGTTGATCGTTACAAGCACATGAACATCTCTCTCGTCGCCGGAGTAGAGGCGAGAGGATTCATATTTGGACCTCCCATCGCGTTAGCCATAGGTGCCAAGTTCGTTCCACTACGCAAACCGGGAAAACTACCCGGGAGAGTGATAAGCGAAGAGTACGAACTTGAGTATGGAAGAGATTGTCTAGAGATGAGTGTAGAAGCCGTCAAATCGGAGGAACGAGCTCTCATCATCGACGATTTAGTTGCCACTGGTGGGACACTCTCTGCTTCCATTAACCTCTTGGAGCGTGCCGGGGCCGAAGTTGTAGAGTGTGCATGCGTTGTTGGTTTGCCTAAGTTTAAGGGGCAGTGTAAGCTGAAGGGAAAGCCTTTGTACGTTCTGGTGGAACCAAACCAGTTTGATGAATTAACCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003999 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005829 GO:0005886 GO:0006139 GO:0006144 GO:0006168 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008152 GO:0008509 GO:0009058 GO:0009112 GO:0009113 GO:0009987 GO:0012505 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015698 GO:0016020 GO:0016740 GO:0016757 GO:0016763 GO:0018130 GO:0019438 GO:0022857 GO:0034220 GO:0034641 GO:0034654 GO:0035435 GO:0042440 GO:0043094 GO:0043096 GO:0043101 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046083 GO:0046084 GO:0046112 GO:0046148 GO:0046483 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0098656 GO:0098660 GO:0098661 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

Pribosyltran

Protein Analysis

192

Amino Acids

21.01

Weight (kDa)

5.69

Isoelectric Point (pI)

21.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pribosyltran	PF00156	14 - 138	2.9e-14	Phosphoribosyl transferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006073)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80050 AT1G80050 AT5G11160 AT5G11160
fragaria_vesca	FvH4_2g28940 FvH4_2g28940 FvH4_2g28940
malus_domestica	MD08G1155300.v1.1 MD15G1126400.v1.1
prunus_persica	Prupe.1G482300_v2.0.a1 Prupe.1G482300_v2.0.a1 Prupe.1G482300_v2.0.a1 Prupe.1G482300_v2.0.a1 Prupe.1G482300_v2.0.a1
pyrus_communis	pycom08g12780 pycom15g11410
rosa_chinensis	RchiOBHm_Chr6g0297761
rosa_laevigata	RLG00000011564
rosa_multiflora	Rmu_sc0002674.1_g000009
rosa_roxburghii	Rroxscaffold_7G00170220 Rroxscaffold_7G00179070
rosa_rugosa	Rorug06G0275400
rosa_samantha	Rh6AG385800 Rh6BG394400 Rh6CG400100 Rh6DG386600
rosa_wichuraiana	Rw6G033630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	577
AccB1I	GGYRCC	1 cut(s)	254
AccI	GTMKAC	1 cut(s)	153
AccII	CGCG	1 cut(s)	242
AclI	AACGTT	1 cut(s)	116
AclWI	GGATC	3 cut(s)	101, 122, 135
AcuI	CTGAAG	1 cut(s)	539
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	2 cut(s)	317, 536
AfiI	CCNNNNNNNGG	3 cut(s)	89, 90, 414
AflIII	ACRYGT	1 cut(s)	145
AluBI	AGCT	2 cut(s)	383, 517
AluI	AGCT	2 cut(s)	383, 517
Alw21I	GWGCWC	1 cut(s)	385
Alw26I	GTCTC	1 cut(s)	24
AlwI	GGATC	3 cut(s)	101, 122, 135
Ama87I	CYCGRG	2 cut(s)	34, 293
AoxI	GGCC	2 cut(s)	45, 456
AspS9I	GGNCC	2 cut(s)	230, 456
AsuC2I	CCSGG	4 cut(s)	282, 294, 295, 454
AvaI	CYCGRG	2 cut(s)	34, 293
AvaII	GGWCC	1 cut(s)	230
BamHI	GGATCC	1 cut(s)	127
BanI	GGYRCC	1 cut(s)	254
BanII	GRGCYC	1 cut(s)	385
Bbv12I	GWGCWC	1 cut(s)	385
BccI	CCATC	2 cut(s)	56, 245
BceAI	ACGGC	1 cut(s)	347
BcgI	CGANNNNNNTGC	2 cut(s)	386, 420
BcnI	CCSGG	4 cut(s)	282, 294, 295, 454
BcoDI	GTCTC	1 cut(s)	24
BfaI	CTAG	1 cut(s)	344
Bme1390I	CCNGG	4 cut(s)	282, 294, 295, 454
Bme18I	GGWCC	1 cut(s)	230
BmeT110I	CYCGRG	2 cut(s)	34, 293
BmgT120I	GGNCC	2 cut(s)	230, 456
BmiI	GGNNCC	4 cut(s)	129, 256, 457, 549
BmrFI	CCNGG	4 cut(s)	282, 294, 295, 454
BmrI	ACTGGG	1 cut(s)	99
BmuI	ACTGGG	1 cut(s)	99
BpuEI	CTTGAG	1 cut(s)	344
BpuMI	CCSGG	4 cut(s)	282, 294, 295, 454
BsaHI	GRCGYC	1 cut(s)	57
BsaI	GGTCTC	1 cut(s)	24
BsaJI	CCNNGG	3 cut(s)	9, 293, 453
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	3 cut(s)	89, 90, 414
Bse1I	ACTGG	4 cut(s)	94, 131, 415, 556
BseDI	CCNNGG	3 cut(s)	9, 293, 453
BseLI	CCNNNNNNNGG	3 cut(s)	89, 90, 414
BseNI	ACTGG	4 cut(s)	94, 131, 415, 556
Bsh1236I	CGCG	1 cut(s)	242
BshFI	GGCC	2 cut(s)	47, 458
BshNI	GGYRCC	1 cut(s)	254
BsiHKAI	GWGCWC	1 cut(s)	385
BsiHKCI	CYCGRG	2 cut(s)	34, 293
BsiSI	CCGG	4 cut(s)	201, 281, 294, 453
BslFI	GGGAC	1 cut(s)	430
BslI	CCNNNNNNNGG	3 cut(s)	89, 90, 414
BsmAI	GTCTC	1 cut(s)	24
BsmFI	GGGAC	1 cut(s)	430
BsnI	GGCC	2 cut(s)	47, 458
Bso31I	GGTCTC	1 cut(s)	24
BsoBI	CYCGRG	2 cut(s)	34, 293
Bsp1286I	GDGCHC	1 cut(s)	385
Bsp143I	GATC	3 cut(s)	93, 127, 166
BspANI	GGCC	2 cut(s)	47, 458
BspFNI	CGCG	1 cut(s)	242
BspLI	GGNNCC	4 cut(s)	129, 256, 457, 549
BspPI	GGATC	3 cut(s)	101, 122, 135
BspT107I	GGYRCC	1 cut(s)	254
BspTNI	GGTCTC	1 cut(s)	24
BsrI	ACTGG	4 cut(s)	94, 131, 415, 556
BssECI	CCNNGG	3 cut(s)	9, 293, 453
BssMI	GATC	3 cut(s)	93, 127, 166
BssNI	GRCGYC	1 cut(s)	57
Bst6I	CTCTTC	2 cut(s)	306, 328
BstACI	GRCGYC	1 cut(s)	57
BstC8I	GCNNGC	2 cut(s)	450, 478
BstDEI	CTNAG	1 cut(s)	495
BstDSI	CCRYGG	1 cut(s)	9
BstFNI	CGCG	1 cut(s)	242
BstKTI	GATC	3 cut(s)	96, 130, 169
BstMAI	GTCTC	1 cut(s)	24
BstMBI	GATC	3 cut(s)	93, 127, 166
BstMWI	GCNNNNNNNGC	2 cut(s)	254, 514
BstNSI	RCATGY	2 cut(s)	149, 480
BstSCI	CCNGG	4 cut(s)	280, 292, 293, 452
BstUI	CGCG	1 cut(s)	242
BstX2I	RGATCY	1 cut(s)	127
BstYI	RGATCY	1 cut(s)	127
BsuRI	GGCC	2 cut(s)	47, 458
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	1 cut(s)	223
BtsI	GCAGTG	1 cut(s)	515
BtsIMutI	CAGTG	2 cut(s)	408, 515
Cac8I	GCNNGC	2 cut(s)	450, 478
Cfr13I	GGNCC	2 cut(s)	230, 456
Cfr9I	CCCGGG	1 cut(s)	293
CseI	GACGC	1 cut(s)	65
Csp6I	GTAC	2 cut(s)	316, 535
CviAII	CATG	4 cut(s)	97, 146, 181, 477
CviJI	RGCY	7 cut(s)	47, 248, 362, 383, 458, 517, 529
CviKI_1	RGCY	7 cut(s)	47, 248, 362, 383, 458, 517, 529
CviQI	GTAC	2 cut(s)	316, 535
DdeI	CTNAG	1 cut(s)	495
DpnI	GATC	3 cut(s)	95, 129, 168
DpnII	GATC	3 cut(s)	93, 127, 166
DraI	TTTAAA	1 cut(s)	142
Eam1104I	CTCTTC	2 cut(s)	306, 328
EarI	CTCTTC	2 cut(s)	306, 328
Ecl136II	GAGCTC	1 cut(s)	383
Eco24I	GRGCYC	1 cut(s)	385
Eco31I	GGTCTC	1 cut(s)	24
Eco47I	GGWCC	1 cut(s)	230
Eco53kI	GAGCTC	1 cut(s)	383
Eco57I	CTGAAG	1 cut(s)	539
Eco88I	CYCGRG	2 cut(s)	34, 293
EcoICRI	GAGCTC	1 cut(s)	383
EcoT38I	GRGCYC	1 cut(s)	385
FaeI	CATG	4 cut(s)	100, 149, 184, 480
FaiI	YATR	9 cut(s)	98, 110, 147, 182, 224, 251, 330, 478, 577
FaqI	GGGAC	1 cut(s)	430
FatI	CATG	4 cut(s)	96, 145, 180, 476
FblI	GTMKAC	1 cut(s)	153
FriOI	GRGCYC	1 cut(s)	385
FspBI	CTAG	1 cut(s)	344
HaeIII	GGCC	2 cut(s)	47, 458
HapII	CCGG	4 cut(s)	201, 281, 294, 453
HgaI	GACGC	1 cut(s)	65
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	4 cut(s)	100, 149, 184, 480
HincII	GTYRAC	1 cut(s)	154
HindII	GTYRAC	1 cut(s)	154
HinfI	GANTC	1 cut(s)	219
HpaII	CCGG	4 cut(s)	201, 281, 294, 453
Hpy166II	GTNNAC	1 cut(s)	154
Hpy188I	TCNGA	2 cut(s)	55, 373
Hpy188III	TCNNGA	2 cut(s)	104, 344
Hpy8I	GTNNAC	1 cut(s)	154
Hpy99I	CGWCG	4 cut(s)	59, 155, 200, 398
HpyAV	CCTTC	1 cut(s)	514
HpyCH4IV	ACGT	2 cut(s)	116, 537
HpyCH4V	TGCA	2 cut(s)	25, 476
HpyF10VI	GCNNNNNNNGC	2 cut(s)	254, 514
HpyF3I	CTNAG	1 cut(s)	495
HpySE526I	ACGT	2 cut(s)	116, 537
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	4 cut(s)	100, 149, 184, 480
Kzo9I	GATC	3 cut(s)	93, 127, 166
LmnI	GCTCC	1 cut(s)	445
MaeI	CTAG	1 cut(s)	344
MaeII	ACGT	2 cut(s)	116, 537
MaeIII	GTNAC	1 cut(s)	170
MalI	GATC	3 cut(s)	95, 129, 168
MboI	GATC	3 cut(s)	93, 127, 166
MboII	GAAGA	3 cut(s)	151, 323, 345
MflI	RGATCY	1 cut(s)	127
MhlI	GDGCHC	1 cut(s)	385
MluCI	AATT	1 cut(s)	566
MmeI	TCCRAC	1 cut(s)	78
MnlI	CCTC	6 cut(s)	84, 202, 209, 243, 367, 449
MseI	TTAA	5 cut(s)	41, 141, 435, 501, 569
MspI	CCGG	4 cut(s)	201, 281, 294, 453
MspR9I	CCNGG	4 cut(s)	282, 294, 295, 454
MvnI	CGCG	1 cut(s)	242
MwoI	GCNNNNNNNGC	2 cut(s)	254, 514
NciI	CCSGG	4 cut(s)	282, 294, 295, 454
NdeII	GATC	3 cut(s)	93, 127, 166
NlaIII	CATG	4 cut(s)	100, 149, 184, 480
NlaIV	GGNNCC	4 cut(s)	129, 256, 457, 549
NspI	RCATGY	2 cut(s)	149, 480
PaeI	GCATGC	1 cut(s)	480
PciI	ACATGT	1 cut(s)	145
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PfeI	GAWTC	1 cut(s)	219
PscI	ACATGT	1 cut(s)	145
PsiI	TTATAA	1 cut(s)	577
Psp124BI	GAGCTC	1 cut(s)	385
Psp1406I	AACGTT	1 cut(s)	116
PspN4I	GGNNCC	4 cut(s)	129, 256, 457, 549
PspPI	GGNCC	2 cut(s)	230, 456
PsuI	RGATCY	1 cut(s)	127
RsaI	GTAC	2 cut(s)	317, 536
RsaNI	GTAC	2 cut(s)	316, 535
SacI	GAGCTC	1 cut(s)	385
SalI	GTCGAC	1 cut(s)	152
SaqAI	TTAA	5 cut(s)	41, 141, 435, 501, 569
Sau3AI	GATC	3 cut(s)	93, 127, 166
Sau96I	GGNCC	2 cut(s)	230, 456
ScrFI	CCNGG	4 cut(s)	282, 294, 295, 454
SduI	GDGCHC	1 cut(s)	385
SetI	ASST	8 cut(s)	119, 235, 256, 385, 441, 519, 540, 575
SinI	GGWCC	1 cut(s)	230
SmaI	CCCGGG	1 cut(s)	295
SmlI	CTYRAG	1 cut(s)	323
SmoI	CTYRAG	1 cut(s)	323
SphI	GCATGC	1 cut(s)	480
Sse9I	AATT	1 cut(s)	566
SspMI	CTAG	1 cut(s)	344
SstI	GAGCTC	1 cut(s)	385
StyD4I	CCNGG	4 cut(s)	280, 292, 293, 452
TaiI	ACGT	2 cut(s)	119, 540
TaqI	TCGA	2 cut(s)	153, 393
TasI	AATT	1 cut(s)	566
TfiI	GAWTC	1 cut(s)	219
Tru1I	TTAA	5 cut(s)	41, 141, 435, 501, 569
Tru9I	TTAA	5 cut(s)	41, 141, 435, 501, 569
TscAI	CASTG	2 cut(s)	415, 515
TspDTI	ATGAA	3 cut(s)	197, 211, 579
TspMI	CCCGGG	1 cut(s)	293
TspRI	CASTG	2 cut(s)	415, 515
VpaK11BI	GGWCC	1 cut(s)	230
XbaI	TCTAGA	1 cut(s)	343
XceI	RCATGY	2 cut(s)	149, 480
XcmI	CCANNNNNNNNNTGG	1 cut(s)	439
XmaI	CCCGGG	1 cut(s)	293
XmiI	GTMKAC	1 cut(s)	153
XspI	CTAG	1 cut(s)	344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.