Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015121

Physical Location & Seq

Genomic Coordinates Reverse (-)

30205314 .. 30208268

Gene Structure 2955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G80350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGTGGGAAGTAGTAATTCGTTAGCGGGTCTACAAGACCACTTGAAATTAGCGAGAGAATATGCACTAGAAGGATCCTATGACACATCTGTCATCTTCTTCGATGGCGCCATTGCTCAGATCAACAAGCATTTAAACACCCTTGACGATCCTTTGGCCCGGACCAAATGGATGAACGTTAAAAAGGCCATAATGGAAGAGACGGAAGTTGTGAAGCAATTGGATGCAGAGAGGAGAGCATTTAAAGAAGCTCCCACTGGGCGTCGCGCTGCTTCTCCACCTATCAATACCAAATCATCCTTTGTTTTTCAGCCCTTGGATGAGTATCCAACTTCATCCGGTGGTGGTCCTATGGATGATCCTGATGTGTGGAGGCCTCCTACCCGTGATGTTACTAGTCGAAGACCCGCCAGGGCTGGTCAAACTGGTACTAGAAAATCACCTCAAGATGGGGCTTGGGCTCGTGGCCCTACTACACGGACCGGTCCAGCTTCCCGTGGTGGCAGAGGTGGGGCTACTAGTAAGTCAACTGCAGGTGCCCGCTCTTCCACTGCCGGAAAGAAGGGAGCTGCCTCAAAATCTAACAAGGCTGAGTCTATGAATGGTGATGCTGAAGATGGGAAGTCAAAAAGGGGATTGTATGAGGGACCTGATGAGGACCTGGCTGCTATGCTTGAAAGGGATGTGTTGGACTCAACTCCTGGTGTCCGTTGGGATGATGTTGCAGGTTTGTCTGAAGCCAAAAGGCTGCTTGAGGAGGCAGTTGTCCTTCCTTTATGGATGCCCGAATACTTTCAGGGTATTCGAAGACCATGGAAAGGAGTTCTCATGTTTGGTCCTCCTGGGACAGGTAAAACCCTGTTGGCAAAAGCTGTTGCAACTGAGTGTGGTACCACCTTCTTCAATGTATCTTCTGCTACATTAGCTTCAAAATGGCGTGGAGAGAGTGAGCGCATGGTCAGATGCCTGTTTGATCTGGCTAGGGCATATGCTCCAAGCACAATTTTTATTGATGAGATCGACTCTCTCTGCAATTCTCGGGGGGGTTCTGGAGAGCATGAATCATCAAGAAGGGTGAAATCGGAACTCCTAGTTCAAGTAGATGGAGTGAGCAATACAGCGACAAATGAAGATGGTAGTCGCAAAATAGTAATGGTATTGGCAGCTACCAACTTCCCGTGGGACATAGATGAAGCTCTCAGGAGGAGGTTGGAAAAACGTATATATATCCCACTTCCAGATTTTGAAAGTCGTAAGGCTCTTATCAATATCAATCTGAGAACAGTTGAGGTGGCGAGTGATGTTAACATTGAAGATGTGGCCCGGAGAACGGAAGGGTACAGTGGAGACGATCTGACTAACGTGTGCAGGGACGCATCAATGAACGGGATGCGGCGTAAGATAGCGGGGAAAACGAGAGATGAGATAAAGAACATGTCGAAAGACGATATATCAAATGATCCAGTGGCAATGTGTGATTTCGAAGAGGCCATTAGGAAAGTGCAACCGAGTGTGTCTTCCTCTGATATCGAGAAACACGAGAAGTGGCTCTCTGAGTTTGGATCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0009653 GO:0009825 GO:0009832 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0016043 GO:0016049 GO:0030154 GO:0030865 GO:0031122 GO:0032502 GO:0032989 GO:0040007 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044085 GO:0044424 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0071554 GO:0071669 GO:0071840 GO:0090558 GO:0090626 GO:0097435

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Vps4_C

Protein Analysis

523

Amino Acids

57.24

Weight (kDa)

6.95

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KATNA1_MIT	PF21126	13 - 73	1.9e-18	Katanin p60 subunit A1, MIT domain
AAA	PF00004	275 - 412	6.8e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	434 - 476	4.1e-13	AAA+ lid domain
Vps4_C	PF09336	476 - 521	3.9e-11	Vps4 C terminal oligomerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80350
fragaria_vesca	FvH4_6g30820 FvH4_6g30820
malus_domestica	MD09G1216700.v1.1 MD17G1198800.v1.1
prunus_persica	Prupe.3G075400_v2.0.a1
pyrus_communis	pycom09g13400 pycom17g20350
rosa_chinensis	RchiOBHm_Chr2g0137251
rosa_laevigata	RLG00000019638
rosa_multiflora	Rmu_sc0000894.1_g000020
rosa_roxburghii	Rroxscaffold_2G00107270
rosa_rugosa	Rorug02G0339900 Rorug02G0340000
rosa_samantha	Rh2BG396400
rosa_wichuraiana	Rw2G031850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	524
AasI	GACNNNNNNGTC	1 cut(s)	89
Acc36I	ACCTGC	2 cut(s)	524, 716
Acc65I	GGTACC	1 cut(s)	890
AccB1I	GGYRCC	3 cut(s)	107, 536, 890
AccBSI	CCGCTC	1 cut(s)	543
AccI	GTMKAC	1 cut(s)	31
AccII	CGCG	1 cut(s)	267
AciI	CCGC	5 cut(s)	26, 408, 541, 1393, 1406
AclI	AACGTT	1 cut(s)	177
AclWI	GGATC	6 cut(s)	69, 82, 143, 353, 1454, 1570
AcuI	CTGAAG	2 cut(s)	633, 756
AcyI	GRCGYC	2 cut(s)	108, 262
AfaI	GTAC	3 cut(s)	430, 892, 1340
AfiI	CCNNNNNNNGG	4 cut(s)	449, 818, 848, 1330
AflIII	ACRYGT	2 cut(s)	1362, 1434
AgeI	ACCGGT	1 cut(s)	482
AgsI	TTSAA	7 cut(s)	46, 677, 904, 930, 1097, 1247, 1313
AhlI	ACTAGT	2 cut(s)	395, 518
AjnI	CCWGG	4 cut(s)	410, 660, 700, 841
AluBI	AGCT	7 cut(s)	251, 491, 569, 872, 926, 1166, 1196
AluI	AGCT	7 cut(s)	251, 491, 569, 872, 926, 1166, 1196
Alw26I	GTCTC	2 cut(s)	194, 1341
AlwI	GGATC	6 cut(s)	69, 82, 143, 353, 1454, 1570
Ama87I	CYCGRG	1 cut(s)	1038
AoxI	GGCC	6 cut(s)	156, 186, 374, 466, 1320, 1488
ApeKI	GCWGC	5 cut(s)	269, 569, 665, 748, 1163
AsiGI	ACCGGT	1 cut(s)	482
Asp700I	GAANNNNTTC	1 cut(s)	792
Asp718I	GGTACC	1 cut(s)	890
AspLEI	GCGC	3 cut(s)	110, 269, 954
AsuC2I	CCSGG	2 cut(s)	160, 1324
AsuHPI	GGTGA	3 cut(s)	432, 617, 1087
AsuII	TTCGAA	2 cut(s)	805, 1482
AvaI	CYCGRG	1 cut(s)	1038
AvaII	GGWCC	7 cut(s)	162, 347, 480, 485, 647, 658, 836
BaeGI	GKGCMC	1 cut(s)	541
BamHI	GGATCC	1 cut(s)	74
BanI	GGYRCC	3 cut(s)	107, 536, 890
BanII	GRGCYC	1 cut(s)	463
BauI	CACGAG	2 cut(s)	462, 1538
BbsI	GAAGAC	3 cut(s)	409, 814, 1509
BbvI	GCAGC	5 cut(s)	256, 556, 652, 735, 1175
BccI	CCATC	5 cut(s)	98, 443, 611, 1097, 1127
BciT130I	CCWGG	4 cut(s)	412, 662, 702, 843
BciVI	GTATCC	1 cut(s)	336
BcnI	CCSGG	2 cut(s)	160, 1324
BcoDI	GTCTC	2 cut(s)	194, 1341
BcuI	ACTAGT	2 cut(s)	395, 518
BfaI	CTAG	6 cut(s)	68, 396, 432, 519, 981, 1091
BfmI	CTRYAG	1 cut(s)	531
BfoI	RGCGCY	1 cut(s)	111
BfuAI	ACCTGC	2 cut(s)	524, 716
BfuI	GTATCC	1 cut(s)	336
BisI	GCNGC	6 cut(s)	270, 570, 666, 749, 1164, 1394
BlsI	GCNGC	6 cut(s)	271, 571, 667, 750, 1165, 1395
Bme1390I	CCNGG	6 cut(s)	160, 412, 662, 702, 843, 1324
Bme18I	GGWCC	7 cut(s)	162, 347, 480, 485, 647, 658, 836
BmeT110I	CYCGRG	1 cut(s)	1038
BmiI	GGNNCC	5 cut(s)	76, 109, 538, 648, 892
BmrFI	CCNGG	6 cut(s)	160, 412, 662, 702, 843, 1324
BmrI	ACTGGG	1 cut(s)	267
BmsI	GCATC	6 cut(s)	214, 598, 771, 953, 1380, 1385
BmuI	ACTGGG	1 cut(s)	267
BpiI	GAAGAC	3 cut(s)	409, 814, 1509
BplI	GAGNNNNNCTC	2 cut(s)	1007, 1039
BpmI	CTGGAG	1 cut(s)	1071
Bpu14I	TTCGAA	2 cut(s)	805, 1482
BpuEI	CTTGAG	2 cut(s)	429, 773
BpuMI	CCSGG	2 cut(s)	160, 1324
BsaBI	GATNNNNATC	1 cut(s)	324
BsaHI	GRCGYC	2 cut(s)	108, 262
BsaJI	CCNNGG	6 cut(s)	315, 411, 496, 812, 842, 1178
BsaWI	WCCGGW	2 cut(s)	338, 482
Bsc4I	CCNNNNNNNGG	4 cut(s)	449, 818, 848, 1330
Bse118I	RCCGGY	1 cut(s)	482
Bse1I	ACTGG	3 cut(s)	262, 430, 1463
Bse3DI	GCAATG	2 cut(s)	111, 1476
Bse8I	GATNNNNATC	1 cut(s)	324
BseBI	CCWGG	4 cut(s)	412, 662, 702, 843
BseDI	CCNNGG	6 cut(s)	315, 411, 496, 812, 842, 1178
BseJI	GATNNNNATC	1 cut(s)	324
BseLI	CCNNNNNNNGG	4 cut(s)	449, 818, 848, 1330
BseMI	GCAATG	2 cut(s)	111, 1476
BseMII	CTCAG	6 cut(s)	131, 582, 873, 1213, 1268, 1545
BseNI	ACTGG	3 cut(s)	262, 430, 1463
BseRI	GAGGAG	3 cut(s)	247, 770, 1219
BseSI	GKGCMC	1 cut(s)	541
BseXI	GCAGC	5 cut(s)	256, 556, 652, 735, 1175
BsgI	GTGCAG	1 cut(s)	1387
Bsh1236I	CGCG	1 cut(s)	267
BshFI	GGCC	6 cut(s)	158, 188, 376, 468, 1322, 1490
BshNI	GGYRCC	3 cut(s)	107, 536, 890
BshTI	ACCGGT	1 cut(s)	482
BsiHKCI	CYCGRG	1 cut(s)	1038
BsiSI	CCGG	5 cut(s)	160, 339, 483, 555, 1324
BslFI	GGGAC	4 cut(s)	660, 859, 1196, 1385
BslI	CCNNNNNNNGG	4 cut(s)	449, 818, 848, 1330
BsmAI	GTCTC	2 cut(s)	194, 1341
BsmBI	CGTCTC	2 cut(s)	194, 1341
BsmFI	GGGAC	4 cut(s)	660, 859, 1196, 1385
BsnI	GGCC	6 cut(s)	158, 188, 376, 468, 1322, 1490
BsoBI	CYCGRG	1 cut(s)	1038
Bsp119I	TTCGAA	2 cut(s)	805, 1482
Bsp1286I	GDGCHC	2 cut(s)	463, 541
Bsp143I	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
Bsp19I	CCATGG	1 cut(s)	812
BspACI	CCGC	5 cut(s)	26, 408, 541, 1393, 1406
BspANI	GGCC	6 cut(s)	158, 188, 376, 468, 1322, 1490
BspCNI	CTCAG	6 cut(s)	130, 583, 874, 1212, 1269, 1546
BspFNI	CGCG	1 cut(s)	267
BspLI	GGNNCC	5 cut(s)	76, 109, 538, 648, 892
BspMAI	CTGCAG	1 cut(s)	535
BspMI	ACCTGC	2 cut(s)	524, 716
BspPI	GGATC	6 cut(s)	69, 82, 143, 353, 1454, 1570
BspQI	GCTCTTC	1 cut(s)	550
BspT104I	TTCGAA	2 cut(s)	805, 1482
BspT107I	GGYRCC	3 cut(s)	107, 536, 890
BsrBI	CCGCTC	1 cut(s)	543
BsrDI	GCAATG	2 cut(s)	111, 1476
BsrFI	RCCGGY	1 cut(s)	482
BsrI	ACTGG	3 cut(s)	262, 430, 1463
BssAI	RCCGGY	1 cut(s)	482
BssECI	CCNNGG	6 cut(s)	315, 411, 496, 812, 842, 1178
BssMI	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
BssNI	GRCGYC	2 cut(s)	108, 262
BssSI	CACGAG	2 cut(s)	462, 1538
BssT1I	CCWWGG	2 cut(s)	315, 812
Bst2BI	CACGAG	2 cut(s)	462, 1538
Bst2UI	CCWGG	4 cut(s)	412, 662, 702, 843
Bst4CI	ACNGT	2 cut(s)	1285, 1343
Bst6I	CTCTTC	3 cut(s)	192, 550, 1479
BstACI	GRCGYC	2 cut(s)	108, 262
BstBI	TTCGAA	2 cut(s)	805, 1482
BstC8I	GCNNGC	1 cut(s)	541
BstDEI	CTNAG	6 cut(s)	117, 591, 882, 1199, 1277, 1554
BstDSI	CCRYGG	3 cut(s)	496, 812, 1178
BstENI	CCTNNNNNAGG	1 cut(s)	846
BstFNI	CGCG	1 cut(s)	267
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	3 cut(s)	110, 269, 954
BstKTI	GATC	9 cut(s)	77, 123, 151, 361, 976, 1020, 1354, 1462, 1565
BstMAI	GTCTC	2 cut(s)	194, 1341
BstMBI	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
BstMWI	GCNNNNNNNGC	1 cut(s)	923
BstNI	CCWGG	4 cut(s)	412, 662, 702, 843
BstNSI	RCATGY	1 cut(s)	1438
BstSCI	CCNGG	6 cut(s)	158, 410, 660, 700, 841, 1322
BstSFI	CTRYAG	1 cut(s)	531
BstSLI	GKGCMC	1 cut(s)	541
BstUI	CGCG	1 cut(s)	267
BstV1I	GCAGC	5 cut(s)	256, 556, 652, 735, 1175
BstV2I	GAAGAC	3 cut(s)	409, 814, 1509
BstX2I	RGATCY	2 cut(s)	74, 1562
BstYI	RGATCY	2 cut(s)	74, 1562
BsuI	GTATCC	1 cut(s)	336
BsuRI	GGCC	6 cut(s)	158, 188, 376, 468, 1322, 1490
BtgI	CCRYGG	3 cut(s)	496, 812, 1178
BtsI	GCAGTG	1 cut(s)	549
BtsIMutI	CAGTG	4 cut(s)	255, 549, 1348, 1470
BveI	ACCTGC	2 cut(s)	524, 716
Cac8I	GCNNGC	1 cut(s)	541
CfoI	GCGC	3 cut(s)	110, 269, 954
Cfr10I	RCCGGY	1 cut(s)	482
CpoI	CGGWCCG	1 cut(s)	480
CseI	GACGC	2 cut(s)	251, 1382
Csp6I	GTAC	3 cut(s)	429, 891, 1339
CspAI	ACCGGT	1 cut(s)	482
CspI	CGGWCCG	1 cut(s)	480
CviAII	CATG	5 cut(s)	813, 829, 955, 1058, 1435
CviQI	GTAC	3 cut(s)	429, 891, 1339
DdeI	CTNAG	6 cut(s)	117, 591, 882, 1199, 1277, 1554
DinI	GGCGCC	1 cut(s)	109
DpnI	GATC	9 cut(s)	76, 122, 150, 360, 975, 1019, 1353, 1461, 1564
DpnII	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
DraI	TTTAAA	2 cut(s)	135, 244
DrdI	GACNNNNNNGTC	1 cut(s)	89
DseDI	GACNNNNNNGTC	1 cut(s)	89
Eam1104I	CTCTTC	3 cut(s)	192, 550, 1479
EarI	CTCTTC	3 cut(s)	192, 550, 1479
Eco130I	CCWWGG	2 cut(s)	315, 812
Eco147I	AGGCCT	1 cut(s)	376
Eco24I	GRGCYC	1 cut(s)	463
Eco32I	GATATC	1 cut(s)	1528
Eco47I	GGWCC	7 cut(s)	162, 347, 480, 485, 647, 658, 836
Eco57I	CTGAAG	2 cut(s)	633, 756
Eco88I	CYCGRG	1 cut(s)	1038
EcoNI	CCTNNNNNAGG	1 cut(s)	846
EcoO109I	RGGNCCY	2 cut(s)	647, 658
EcoRII	CCWGG	4 cut(s)	410, 660, 700, 841
EcoRV	GATATC	1 cut(s)	1528
EcoT14I	CCWWGG	2 cut(s)	315, 812
EcoT38I	GRGCYC	1 cut(s)	463
EgeI	GGCGCC	1 cut(s)	109
EheI	GGCGCC	1 cut(s)	109
ErhI	CCWWGG	2 cut(s)	315, 812
Esp3I	CGTCTC	2 cut(s)	194, 1341
FaeI	CATG	5 cut(s)	816, 832, 958, 1061, 1438
FaqI	GGGAC	4 cut(s)	660, 859, 1196, 1385
FatI	CATG	5 cut(s)	812, 828, 954, 1057, 1434
FauI	CCCGC	4 cut(s)	19, 415, 548, 1399
FauNDI	CATATG	1 cut(s)	988
FblI	GTMKAC	1 cut(s)	31
Fnu4HI	GCNGC	6 cut(s)	270, 570, 666, 749, 1164, 1394
FriOI	GRGCYC	1 cut(s)	463
Fsp4HI	GCNGC	6 cut(s)	270, 570, 666, 749, 1164, 1394
FspBI	CTAG	6 cut(s)	68, 396, 432, 519, 981, 1091
GlaI	GCGC	3 cut(s)	109, 268, 953
GluI	GCNGC	6 cut(s)	270, 570, 666, 749, 1164, 1394
GsuI	CTGGAG	1 cut(s)	1071
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	6 cut(s)	158, 188, 376, 468, 1322, 1490
HapII	CCGG	5 cut(s)	160, 339, 483, 555, 1324
HgaI	GACGC	2 cut(s)	251, 1382
HhaI	GCGC	3 cut(s)	110, 269, 954
Hin1I	GRCGYC	2 cut(s)	108, 262
Hin1II	CATG	5 cut(s)	816, 832, 958, 1061, 1438
Hin6I	GCGC	3 cut(s)	108, 267, 952
HinP1I	GCGC	3 cut(s)	108, 267, 952
HincII	GTYRAC	2 cut(s)	528, 1306
HindII	GTYRAC	2 cut(s)	528, 1306
HinfI	GANTC	4 cut(s)	593, 692, 1022, 1061
HpaI	GTTAAC	1 cut(s)	1306
HpaII	CCGG	5 cut(s)	160, 339, 483, 555, 1324
HphI	GGTGA	3 cut(s)	432, 617, 1087
Hpy166II	GTNNAC	3 cut(s)	32, 528, 1306
Hpy188I	TCNGA	8 cut(s)	120, 736, 962, 1084, 1278, 1356, 1525, 1555
Hpy188III	TCNNGA	7 cut(s)	362, 446, 1050, 1068, 1201, 1238, 1531
Hpy8I	GTNNAC	3 cut(s)	32, 528, 1306
Hpy99I	CGWCG	1 cut(s)	267
HpyAV	CCTTC	6 cut(s)	65, 556, 779, 907, 1065, 1328
HpyCH4III	ACNGT	2 cut(s)	1285, 1343
HpyCH4IV	ACGT	3 cut(s)	177, 1219, 1362
HpyCH4V	TGCA	8 cut(s)	65, 227, 533, 725, 878, 1032, 1368, 1504
HpyF10VI	GCNNNNNNNGC	1 cut(s)	923
HpyF3I	CTNAG	6 cut(s)	117, 591, 882, 1199, 1277, 1554
HpySE526I	ACGT	3 cut(s)	177, 1219, 1362
Hsp92I	GRCGYC	2 cut(s)	108, 262
Hsp92II	CATG	5 cut(s)	816, 832, 958, 1061, 1438
HspAI	GCGC	3 cut(s)	108, 267, 952
KasI	GGCGCC	1 cut(s)	107
KpnI	GGTACC	1 cut(s)	894
KspAI	GTTAAC	1 cut(s)	1306
Kzo9I	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
LguI	GCTCTTC	1 cut(s)	550
LmnI	GCTCC	3 cut(s)	256, 566, 997
Lsp1109I	GCAGC	5 cut(s)	256, 556, 652, 735, 1175
LweI	GCATC	6 cut(s)	214, 598, 771, 953, 1380, 1385
MaeI	CTAG	6 cut(s)	68, 396, 432, 519, 981, 1091
MaeII	ACGT	3 cut(s)	177, 1219, 1362
MaeIII	GTNAC	1 cut(s)	391
MalI	GATC	9 cut(s)	76, 122, 150, 360, 975, 1019, 1353, 1461, 1564
MbiI	CCGCTC	1 cut(s)	543
MboI	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
MfeI	CAATTG	1 cut(s)	218
MflI	RGATCY	2 cut(s)	74, 1562
MhlI	GDGCHC	2 cut(s)	463, 541
MluCI	AATT	5 cut(s)	16, 47, 218, 1002, 1033
Mly113I	GGCGCC	1 cut(s)	108
MlyI	GAGTC	3 cut(s)	602, 686, 1016
MmeI	TCCRAC	3 cut(s)	353, 669, 1191
MroXI	GAANNNNTTC	1 cut(s)	792
MseI	TTAA	5 cut(s)	134, 180, 243, 1305, 1570
MspI	CCGG	5 cut(s)	160, 339, 483, 555, 1324
MspR9I	CCNGG	6 cut(s)	160, 412, 662, 702, 843, 1324
MunI	CAATTG	1 cut(s)	218
MvaI	CCWGG	4 cut(s)	412, 662, 702, 843
MvnI	CGCG	1 cut(s)	267
MwoI	GCNNNNNNNGC	1 cut(s)	923
NarI	GGCGCC	1 cut(s)	108
NciI	CCSGG	2 cut(s)	160, 1324
NcoI	CCATGG	1 cut(s)	812
NdeI	CATATG	1 cut(s)	988
NdeII	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
NlaIII	CATG	5 cut(s)	816, 832, 958, 1061, 1438
NlaIV	GGNNCC	5 cut(s)	76, 109, 538, 648, 892
NspI	RCATGY	1 cut(s)	1438
NspV	TTCGAA	2 cut(s)	805, 1482
PaqCI	CACCTGC	1 cut(s)	524
PceI	AGGCCT	1 cut(s)	376
PciI	ACATGT	1 cut(s)	1434
PciSI	GCTCTTC	1 cut(s)	550
PcsI	WCGNNNNNNNCGW	1 cut(s)	1536
PdmI	GAANNNNTTC	1 cut(s)	792
PfeI	GAWTC	1 cut(s)	1061
PinAI	ACCGGT	1 cut(s)	482
PkrI	GCNGC	6 cut(s)	271, 571, 667, 750, 1165, 1395
PleI	GAGTC	3 cut(s)	601, 686, 1016
PluTI	GGCGCC	1 cut(s)	111
PpsI	GAGTC	3 cut(s)	601, 686, 1016
PpuMI	RGGWCCY	2 cut(s)	647, 658
PscI	ACATGT	1 cut(s)	1434
Psp1406I	AACGTT	1 cut(s)	177
Psp5II	RGGWCCY	2 cut(s)	647, 658
Psp6I	CCWGG	4 cut(s)	410, 660, 700, 841
PspGI	CCWGG	4 cut(s)	410, 660, 700, 841
PspN4I	GGNNCC	5 cut(s)	76, 109, 538, 648, 892
PspPPI	RGGWCCY	2 cut(s)	647, 658
PstI	CTGCAG	1 cut(s)	535
PsuI	RGATCY	2 cut(s)	74, 1562
RsaI	GTAC	3 cut(s)	430, 892, 1340
RsaNI	GTAC	3 cut(s)	429, 891, 1339
Rsr2I	CGGWCCG	1 cut(s)	480
RsrII	CGGWCCG	1 cut(s)	480
SapI	GCTCTTC	1 cut(s)	550
SaqAI	TTAA	5 cut(s)	134, 180, 243, 1305, 1570
SatI	GCNGC	6 cut(s)	270, 570, 666, 749, 1164, 1394
Sau3AI	GATC	9 cut(s)	74, 120, 148, 358, 973, 1017, 1351, 1459, 1562
SchI	GAGTC	3 cut(s)	602, 686, 1016
ScrFI	CCNGG	6 cut(s)	160, 412, 662, 702, 843, 1324
SduI	GDGCHC	2 cut(s)	463, 541
SfaNI	GCATC	6 cut(s)	214, 598, 771, 953, 1380, 1385
SfcI	CTRYAG	1 cut(s)	531
SfoI	GGCGCC	1 cut(s)	109
SfuI	TTCGAA	2 cut(s)	805, 1482
SinI	GGWCC	7 cut(s)	162, 347, 480, 485, 647, 658, 836
SmlI	CTYRAG	2 cut(s)	444, 752
SmoI	CTYRAG	2 cut(s)	444, 752
SpeI	ACTAGT	2 cut(s)	395, 518
Sse9I	AATT	5 cut(s)	16, 47, 218, 1002, 1033
SseBI	AGGCCT	1 cut(s)	376
SsiI	CCGC	5 cut(s)	26, 408, 541, 1393, 1406
SspDI	GGCGCC	1 cut(s)	107
SspMI	CTAG	6 cut(s)	68, 396, 432, 519, 981, 1091
StuI	AGGCCT	1 cut(s)	376
StyD4I	CCNGG	6 cut(s)	158, 410, 660, 700, 841, 1322
StyI	CCWWGG	2 cut(s)	315, 812
TaaI	ACNGT	2 cut(s)	1285, 1343
TaiI	ACGT	3 cut(s)	180, 1222, 1365
TaqI	TCGA	7 cut(s)	102, 400, 805, 1020, 1439, 1482, 1530
TasI	AATT	5 cut(s)	16, 47, 218, 1002, 1033
TauI	GCSGC	1 cut(s)	1396
TfiI	GAWTC	1 cut(s)	1061
Tru1I	TTAA	5 cut(s)	134, 180, 243, 1305, 1570
Tru9I	TTAA	5 cut(s)	134, 180, 243, 1305, 1570
TscAI	CASTG	4 cut(s)	262, 556, 1348, 1470
TseI	GCWGC	5 cut(s)	269, 569, 665, 748, 1163
TspDTI	ATGAA	7 cut(s)	188, 324, 614, 1074, 1143, 1206, 1397
TspGWI	ACGGA	4 cut(s)	218, 493, 698, 1346
TspRI	CASTG	4 cut(s)	262, 556, 1348, 1470
VpaK11BI	GGWCC	7 cut(s)	162, 347, 480, 485, 647, 658, 836
XagI	CCTNNNNNAGG	1 cut(s)	846
XceI	RCATGY	1 cut(s)	1438
XmiI	GTMKAC	1 cut(s)	31
XmnI	GAANNNNTTC	1 cut(s)	792
XspI	CTAG	6 cut(s)	68, 396, 432, 519, 981, 1091

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.