Prupe.3G075400_v2.0.a1

Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
5533753 .. 5537950
4198 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G075400.1

Sequence Viewer

Length: 1566 bp
ATGGTGGGGCCAACTCTGGTGGGTCTGCAAGACCACCTGAAGCTGGCGAGAGAGTACGCAATGGAAGGGCTCTACGATACCTCCTTGATCTTCTTTGATGGTGGCATTGCTCAGATCAACAAGCACCTAAACACGCTTGATGATCCGTTGATTCGCTCGAAATGGATGAATGTAAAGAAAGCACTTACCGAGGAGGCCGAGGTTGTGAAACAATTAGATGCAGAGAGAAGAGCATTTAAGGAAAGTCCCTTGGGCCGACGCCCTTCTTCGCCTCCAATTCATGCTAAGTCGTCATTTGTTTTTCAACCCTTAGATGAATACCCAACTTCTTCTGGTTTGCCCATGGATGATCCTGATGTGTGGAGGCCACCAAGTCGGGACACTACAGGTAGAAGACCTGGAAAGGCTGGCCCAGGTGGTATGAGGAAGTCACCACAAGATGCAACTTGGGCTCGTGGCTCTGCAACAAGAACAGCCCCACCTGGCCGTGGTGCAAAGGCTGGTGGATCAAGTAGGGCTAACTCAGCGGTTCGAACATCTGCTACTGGAAAGAAAGGCACTGGTTCCATCAAATCTAGCAAGGCAGATTCAGCAAATGGTGATGCTGAAGATGGAAAGTCAAAGAGGTCACAGTATGAGGGACCGGATCCTGATTTGGCTGAAATGCTTGAAAGGGATGTGCTGGAAACCAGTCCTGGAGTGAGATGGGATGATGTTGCTGGTTTGACTGAAGCAAAAAGACTTCTAGAGGAAGCTGTTGTGCTTCCTTTGTGGATGCCTGAATATTTTCAGGGAATTAGGAGGCCATGGAAGGGTGTTCTTATGTTCGGTCCTCCTGGAACTGGGAAGACGTTACTTGCTAAAGCTGTTGCTACTGAGTGTGGAACAACTTTTTTCAATGTCTCCTCTGCTACTTTAGCTTCAAAATGGCGTGGAGAGAGTGAACGTATGGTACGGTGCTTATTTGATCTTGCAAGAGCTTATGCGCCGAGTACAATATTCATTGATGAAATTGATTCACTTTGCAATTCCCGGGGGGCATCTGGGGAGCATGAGTCATCTAGAAGGGTGAAATCTGAACTTCTAGTTCAGGTAGATGGGGTCAACAATACTGGCACAAATGAAGATGGTACTCGTAAAATAGTGATGGTTTTGGCCGCTACTAACTTTCCATGGGACATAGATGAGGCACTCAGGAGGAGGCTGGAGAAGCGTATTTATATTCCCCTACCAAATTTTGAGAGCCGTAAAGCACTTATTCGGATAAATTTGAAATCCGTCGAGGTGGCTCAGGACGTAGATATTGATGATGTGGCTCGCAGAACAGAGGGATATAGTGGTGATGATCTCACAAATGTTTGCCGGGATGCTTCCCTGAATGGGATGAGGCGCAAAATAGCTGGAAAGACGCGTGAAGAGATCAAGAGCATGTCCAAGGATGATATCTCAAAGGATCCCGTTGCCATGTGTGACTTCGAAGAAGCCTTGCGGAAGGTCCAGCGGAGTGTTTCTCAAGCTGATATTGAACGGCATGAGAAATGGTTTAACGAATTTGGATCAGGATAG

Protein Analysis

522

Amino Acids

57.45

Weight (kDa)

8.4

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015121)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80350
fragaria_vesca FvH4_6g30820 FvH4_6g30820
malus_domestica MD09G1216700.v1.1 MD17G1198800.v1.1
prunus_persica Prupe.3G075400_v2.0.a1
pyrus_communis pycom09g13400 pycom17g20350
rosa_chinensis RchiOBHm_Chr2g0137251
rosa_laevigata RLG00000019638
rosa_multiflora Rmu_sc0000894.1_g000020
rosa_roxburghii Rroxscaffold_2G00107270
rosa_rugosa Rorug02G0339900 Rorug02G0340000
rosa_samantha Rh2BG396400
rosa_wichuraiana Rw2G031850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1411
AciI CCGC 4 cut(s) 527, 1158, 1489, 1501
AclWI GGATC 8 cut(s) 137, 344, 514, 641, 654, 1448, 1461, 1564
AcoI YGGCCR 2 cut(s) 484, 1155
AcsI RAATTY 3 cut(s) 1234, 1267, 1550
AcuI CTGAAG 3 cut(s) 59, 627, 750
AcyI GRCGYC 1 cut(s) 259
AfaI GTAC 4 cut(s) 56, 954, 994, 1132
AfiI CCNNNNNNNGG 5 cut(s) 43, 488, 812, 842, 1380
AflIII ACRYGT 1 cut(s) 1409
AgsI TTSAA 6 cut(s) 305, 671, 898, 924, 1273, 1526
AjnI CCWGG 5 cut(s) 397, 412, 481, 694, 835
AluBI AGCT 7 cut(s) 43, 755, 866, 920, 980, 1400, 1517
AluI AGCT 7 cut(s) 43, 755, 866, 920, 980, 1400, 1517
Alw26I GTCTC 1 cut(s) 907
AlwI GGATC 8 cut(s) 137, 344, 514, 641, 654, 1448, 1461, 1564
Ama87I CYCGRG 1 cut(s) 1032
AoxI GGCC 8 cut(s) 8, 195, 253, 365, 409, 484, 803, 1155
ApoI RAATTY 3 cut(s) 1234, 1267, 1550
Asp700I GAANNNNTTC 1 cut(s) 786
AspLEI GCGC 2 cut(s) 988, 1392
AspS9I GGNCC 6 cut(s) 8, 253, 410, 641, 830, 1495
AsuC2I CCSGG 3 cut(s) 1033, 1034, 1364
AsuHPI GGTGA 4 cut(s) 423, 611, 1081, 1352
AsuII TTCGAA 2 cut(s) 532, 1476
AvaI CYCGRG 1 cut(s) 1032
AvaII GGWCC 3 cut(s) 641, 830, 1495
BamHI GGATCC 2 cut(s) 646, 1453
BanII GRGCYC 2 cut(s) 72, 454
BauI CACGAG 1 cut(s) 453
BbsI GAAGAC 2 cut(s) 400, 854
BccI CCATC 7 cut(s) 92, 575, 605, 699, 1091, 1121, 1141
BceAI ACGGC 3 cut(s) 471, 1230, 1544
BciT130I CCWGG 5 cut(s) 399, 414, 483, 696, 837
BcnI CCSGG 3 cut(s) 1033, 1034, 1364
BcoDI GTCTC 1 cut(s) 907
BfaI CTAG 4 cut(s) 576, 746, 1062, 1085
BfmI CTRYAG 1 cut(s) 384
BisI GCNGC 1 cut(s) 1158
BlsI GCNGC 1 cut(s) 1159
Bme1390I CCNGG 8 cut(s) 399, 414, 483, 696, 837, 1033, 1034, 1364
Bme18I GGWCC 3 cut(s) 641, 830, 1495
BmeT110I CYCGRG 1 cut(s) 1032
BmgT120I GGNCC 6 cut(s) 8, 253, 410, 641, 830, 1495
BmiI GGNNCC 5 cut(s) 9, 565, 642, 648, 1455
BmrFI CCNGG 8 cut(s) 399, 414, 483, 696, 837, 1033, 1034, 1364
BmrI ACTGGG 1 cut(s) 852
BmsI GCATC 6 cut(s) 208, 430, 592, 765, 1049, 1357
BmuI ACTGGG 1 cut(s) 852
BpiI GAAGAC 2 cut(s) 400, 854
BplI GAGNNNNNCTC 2 cut(s) 1495, 1527
BpmI CTGGAG 2 cut(s) 717, 1226
Bpu10I CCTNAGC 1 cut(s) 1290
Bpu14I TTCGAA 2 cut(s) 532, 1476
BpuEI CTTGAG 1 cut(s) 1497
BpuMI CCSGG 3 cut(s) 1033, 1034, 1364
BsaHI GRCGYC 1 cut(s) 259
BsaWI WCCGGW 1 cut(s) 643
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 1040, 1070
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 488, 812, 842, 1380
Bse1I ACTGG 5 cut(s) 550, 565, 690, 847, 1117
Bse3DI GCAATG 2 cut(s) 66, 105
BseBI CCWGG 5 cut(s) 399, 414, 483, 696, 837
BseGI GGATG 8 cut(s) 171, 352, 682, 715, 780, 1372, 1389, 1444
BseLI CCNNNNNNNGG 5 cut(s) 43, 488, 812, 842, 1380
BseMI GCAATG 2 cut(s) 66, 105
BseMII CTCAG 5 cut(s) 125, 537, 867, 1207, 1304
BseNI ACTGG 5 cut(s) 550, 565, 690, 847, 1117
BseRI GAGGAG 3 cut(s) 206, 895, 1213
Bsh1236I CGCG 1 cut(s) 1411
BshFI GGCC 8 cut(s) 10, 197, 255, 367, 411, 486, 805, 1157
BsiHKCI CYCGRG 1 cut(s) 1032
BsiSI CCGG 3 cut(s) 644, 1033, 1363
BslFI GGGAC 4 cut(s) 231, 392, 654, 1190
BslI CCNNNNNNNGG 5 cut(s) 43, 488, 812, 842, 1380
BsmAI GTCTC 1 cut(s) 907
BsmFI GGGAC 4 cut(s) 231, 392, 654, 1190
BsnI GGCC 8 cut(s) 10, 197, 255, 367, 411, 486, 805, 1157
BsoBI CYCGRG 1 cut(s) 1032
Bsp119I TTCGAA 2 cut(s) 532, 1476
Bsp1286I GDGCHC 2 cut(s) 72, 454
Bsp19I CCATGG 3 cut(s) 342, 806, 1172
BspACI CCGC 4 cut(s) 527, 1158, 1489, 1501
BspANI GGCC 8 cut(s) 10, 197, 255, 367, 411, 486, 805, 1157
BspCNI CTCAG 5 cut(s) 124, 536, 868, 1206, 1303
BspFNI CGCG 1 cut(s) 1411
BspLI GGNNCC 5 cut(s) 9, 565, 642, 648, 1455
BspPI GGATC 8 cut(s) 137, 344, 514, 641, 654, 1448, 1461, 1564
BspQI GCTCTTC 1 cut(s) 223
BspT104I TTCGAA 2 cut(s) 532, 1476
BsrDI GCAATG 2 cut(s) 66, 105
BsrI ACTGG 5 cut(s) 550, 565, 690, 847, 1117
BssNI GRCGYC 1 cut(s) 259
BssSI CACGAG 1 cut(s) 453
BssT1I CCWWGG 5 cut(s) 249, 342, 806, 1172, 1434
Bst2BI CACGAG 1 cut(s) 453
Bst2UI CCWGG 5 cut(s) 399, 414, 483, 696, 837
Bst4CI ACNGT 2 cut(s) 633, 957
Bst6I CTCTTC 2 cut(s) 223, 1410
BstACI GRCGYC 1 cut(s) 259
BstBI TTCGAA 2 cut(s) 532, 1476
BstC8I GCNNGC 3 cut(s) 45, 409, 1318
BstDEI CTNAG 7 cut(s) 111, 285, 310, 523, 876, 1193, 1290
BstDSI CCRYGG 4 cut(s) 342, 487, 806, 1172
BstF5I GGATG 8 cut(s) 171, 352, 682, 715, 780, 1372, 1389, 1444
BstFNI CGCG 1 cut(s) 1411
BstHHI GCGC 2 cut(s) 988, 1392
BstMAI GTCTC 1 cut(s) 907
BstMWI GCNNNNNNNGC 5 cut(s) 449, 524, 590, 917, 1210
BstNI CCWGG 5 cut(s) 399, 414, 483, 696, 837
BstNSI RCATGY 1 cut(s) 1432
BstSCI CCNGG 8 cut(s) 397, 412, 481, 694, 835, 1031, 1032, 1362
BstSFI CTRYAG 1 cut(s) 384
BstUI CGCG 1 cut(s) 1411
BstV2I GAAGAC 2 cut(s) 400, 854
BstX2I RGATCY 2 cut(s) 646, 1453
BstYI RGATCY 2 cut(s) 646, 1453
BsuRI GGCC 8 cut(s) 10, 197, 255, 367, 411, 486, 805, 1157
BtgI CCRYGG 4 cut(s) 342, 487, 806, 1172
BtsCI GGATG 8 cut(s) 171, 352, 682, 715, 780, 1372, 1389, 1444
BtsIMutI CAGTG 1 cut(s) 558
Cac8I GCNNGC 3 cut(s) 45, 409, 1318
CfoI GCGC 2 cut(s) 988, 1392
Cfr13I GGNCC 6 cut(s) 8, 253, 410, 641, 830, 1495
Cfr9I CCCGGG 1 cut(s) 1032
CseI GACGC 2 cut(s) 267, 1417
Csp6I GTAC 4 cut(s) 55, 953, 993, 1131
CspCI CAANNNNNGTGG 1 cut(s) 35
CviAII CATG 8 cut(s) 281, 343, 807, 1052, 1173, 1429, 1465, 1532
CviQI GTAC 4 cut(s) 55, 953, 993, 1131
DdeI CTNAG 7 cut(s) 111, 285, 310, 523, 876, 1193, 1290
EaeI YGGCCR 2 cut(s) 484, 1155
Eam1104I CTCTTC 2 cut(s) 223, 1410
EarI CTCTTC 2 cut(s) 223, 1410
Eco130I CCWWGG 5 cut(s) 249, 342, 806, 1172, 1434
Eco24I GRGCYC 2 cut(s) 72, 454
Eco32I GATATC 1 cut(s) 1444
Eco47I GGWCC 3 cut(s) 641, 830, 1495
Eco57I CTGAAG 3 cut(s) 59, 627, 750
Eco88I CYCGRG 1 cut(s) 1032
EcoRII CCWGG 5 cut(s) 397, 412, 481, 694, 835
EcoRV GATATC 1 cut(s) 1444
EcoT14I CCWWGG 5 cut(s) 249, 342, 806, 1172, 1434
EcoT38I GRGCYC 2 cut(s) 72, 454
ErhI CCWWGG 5 cut(s) 249, 342, 806, 1172, 1434
FaeI CATG 8 cut(s) 284, 346, 810, 1055, 1176, 1432, 1468, 1535
FaqI GGGAC 4 cut(s) 231, 392, 654, 1190
FatI CATG 8 cut(s) 280, 342, 806, 1051, 1172, 1428, 1464, 1531
Fnu4HI GCNGC 1 cut(s) 1158
FokI GGATG 8 cut(s) 178, 359, 689, 722, 787, 1379, 1396, 1451
FriOI GRGCYC 2 cut(s) 72, 454
Fsp4HI GCNGC 1 cut(s) 1158
FspBI CTAG 4 cut(s) 576, 746, 1062, 1085
GlaI GCGC 2 cut(s) 987, 1391
GluI GCNGC 1 cut(s) 1158
GsuI CTGGAG 2 cut(s) 717, 1226
HaeIII GGCC 8 cut(s) 10, 197, 255, 367, 411, 486, 805, 1157
HapII CCGG 3 cut(s) 644, 1033, 1363
HgaI GACGC 2 cut(s) 267, 1417
HhaI GCGC 2 cut(s) 988, 1392
Hin1I GRCGYC 1 cut(s) 259
Hin1II CATG 8 cut(s) 284, 346, 810, 1055, 1176, 1432, 1468, 1535
Hin6I GCGC 2 cut(s) 986, 1390
HinP1I GCGC 2 cut(s) 986, 1390
HincII GTYRAC 1 cut(s) 1105
HindII GTYRAC 1 cut(s) 1105
HinfI GANTC 4 cut(s) 151, 587, 1016, 1055
HpaII CCGG 3 cut(s) 644, 1033, 1363
HphI GGTGA 4 cut(s) 423, 611, 1081, 1352
Hpy166II GTNNAC 2 cut(s) 944, 1105
Hpy188I TCNGA 3 cut(s) 114, 1078, 1263
Hpy188III TCNNGA 9 cut(s) 353, 377, 650, 746, 1062, 1195, 1292, 1423, 1560
Hpy8I GTNNAC 2 cut(s) 944, 1105
Hpy99I CGWCG 2 cut(s) 261, 1283
HpyAV CCTTC 5 cut(s) 59, 273, 805, 1059, 1486
HpyCH4III ACNGT 2 cut(s) 633, 957
HpyCH4IV ACGT 3 cut(s) 851, 946, 1296
HpyCH4V TGCA 7 cut(s) 28, 221, 443, 464, 494, 974, 1026
HpyF10VI GCNNNNNNNGC 5 cut(s) 449, 524, 590, 917, 1210
HpyF3I CTNAG 7 cut(s) 111, 285, 310, 523, 876, 1193, 1290
HpySE526I ACGT 3 cut(s) 851, 946, 1296
Hsp92I GRCGYC 1 cut(s) 259
Hsp92II CATG 8 cut(s) 284, 346, 810, 1055, 1176, 1432, 1468, 1535
HspAI GCGC 2 cut(s) 986, 1390
LguI GCTCTTC 1 cut(s) 223
LmnI GCTCC 1 cut(s) 1048
LweI GCATC 6 cut(s) 208, 430, 592, 765, 1049, 1357
MaeI CTAG 4 cut(s) 576, 746, 1062, 1085
MaeII ACGT 3 cut(s) 851, 946, 1296
MaeIII GTNAC 4 cut(s) 429, 627, 852, 1469
MflI RGATCY 2 cut(s) 646, 1453
MhlI GDGCHC 2 cut(s) 72, 454
MluCI AATT 8 cut(s) 212, 276, 795, 1011, 1027, 1234, 1267, 1550
MluI ACGCGT 1 cut(s) 1409
MlyI GAGTC 1 cut(s) 1064
MroXI GAANNNNTTC 1 cut(s) 786
MseI TTAA 2 cut(s) 237, 1545
MspA1I CMGCKG 2 cut(s) 527, 1501
MspI CCGG 3 cut(s) 644, 1033, 1363
MspR9I CCNGG 8 cut(s) 399, 414, 483, 696, 837, 1033, 1034, 1364
MvaI CCWGG 5 cut(s) 399, 414, 483, 696, 837
MvnI CGCG 1 cut(s) 1411
MwoI GCNNNNNNNGC 5 cut(s) 449, 524, 590, 917, 1210
NciI CCSGG 3 cut(s) 1033, 1034, 1364
NcoI CCATGG 3 cut(s) 342, 806, 1172
NlaIII CATG 8 cut(s) 284, 346, 810, 1055, 1176, 1432, 1468, 1535
NlaIV GGNNCC 5 cut(s) 9, 565, 642, 648, 1455
NmeAIII GCCGAG 2 cut(s) 223, 1014
NmuCI GTSAC 3 cut(s) 429, 627, 1469
NspI RCATGY 1 cut(s) 1432
NspV TTCGAA 2 cut(s) 532, 1476
PciSI GCTCTTC 1 cut(s) 223
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 3 cut(s) 151, 587, 1016
PfoI TCCNGGA 2 cut(s) 694, 835
PkrI GCNGC 1 cut(s) 1159
PleI GAGTC 1 cut(s) 1063
PpsI GAGTC 1 cut(s) 1063
Psp6I CCWGG 5 cut(s) 397, 412, 481, 694, 835
PspGI CCWGG 5 cut(s) 397, 412, 481, 694, 835
PspN4I GGNNCC 5 cut(s) 9, 565, 642, 648, 1455
PspPI GGNCC 6 cut(s) 8, 253, 410, 641, 830, 1495
PsrI GAACNNNNNNTAC 4 cut(s) 526, 558, 936, 968
PsuI RGATCY 2 cut(s) 646, 1453
RsaI GTAC 4 cut(s) 56, 954, 994, 1132
RsaNI GTAC 4 cut(s) 55, 953, 993, 1131
SapI GCTCTTC 1 cut(s) 223
SaqAI TTAA 2 cut(s) 237, 1545
SatI GCNGC 1 cut(s) 1158
Sau96I GGNCC 6 cut(s) 8, 253, 410, 641, 830, 1495
SchI GAGTC 1 cut(s) 1064
ScrFI CCNGG 8 cut(s) 399, 414, 483, 696, 837, 1033, 1034, 1364
SduI GDGCHC 2 cut(s) 72, 454
SfaNI GCATC 6 cut(s) 208, 430, 592, 765, 1049, 1357
SfcI CTRYAG 1 cut(s) 384
SfuI TTCGAA 2 cut(s) 532, 1476
SinI GGWCC 3 cut(s) 641, 830, 1495
SmaI CCCGGG 1 cut(s) 1034
SmlI CTYRAG 1 cut(s) 1512
SmoI CTYRAG 1 cut(s) 1512
Sse9I AATT 8 cut(s) 212, 276, 795, 1011, 1027, 1234, 1267, 1550
SsiI CCGC 4 cut(s) 527, 1158, 1489, 1501
SspI AATATT 2 cut(s) 785, 999
SspMI CTAG 4 cut(s) 576, 746, 1062, 1085
StyD4I CCNGG 8 cut(s) 397, 412, 481, 694, 835, 1031, 1032, 1362
StyI CCWWGG 5 cut(s) 249, 342, 806, 1172, 1434
TaaI ACNGT 2 cut(s) 633, 957
TaiI ACGT 3 cut(s) 854, 949, 1299
TaqI TCGA 4 cut(s) 158, 532, 1281, 1476
TaqII GACCGA 1 cut(s) 818
TasI AATT 8 cut(s) 212, 276, 795, 1011, 1027, 1234, 1267, 1550
TatI WGTACW 1 cut(s) 992
TauI GCSGC 1 cut(s) 1160
TfiI GAWTC 3 cut(s) 151, 587, 1016
Tru1I TTAA 2 cut(s) 237, 1545
Tru9I TTAA 2 cut(s) 237, 1545
TscAI CASTG 1 cut(s) 565
TseFI GTSAC 3 cut(s) 429, 627, 1469
Tsp45I GTSAC 3 cut(s) 429, 627, 1469
TspDTI ATGAA 6 cut(s) 182, 269, 330, 991, 1023, 1137
TspGWI ACGGA 2 cut(s) 135, 1267
TspMI CCCGGG 1 cut(s) 1032
TspRI CASTG 1 cut(s) 565
VpaK11BI GGWCC 3 cut(s) 641, 830, 1495
XapI RAATTY 3 cut(s) 1234, 1267, 1550
XbaI TCTAGA 2 cut(s) 745, 1061
XceI RCATGY 1 cut(s) 1432
XmaI CCCGGG 1 cut(s) 1032
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 4 cut(s) 576, 746, 1062, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.