Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0015121

Physical Location & Seq

Genomic Coordinates Forward (+)

31087612 .. 31092588

Gene Structure 4977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00107270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGTGGGTCCGACGCTGGTGGGTCTGCAAGACCACCTGAAGCTGGCGAGAGAGTACGCGATGGAAGGGCTCTACGACACCTCCATGATCTTCTTCGACGGGCGGCATTGCTCAGATCAACAAGGTGCTAAAATCCAACCACATTGTGTGAGATTGCACTTAAACACGCTTGATGACCCGTTGATTCGCTCAAAATGGATGAATGTAAAGAAGGCACTTTCCGAGGAAGCAGAGGTTGTGAAACAACTAGATGCCGAGAGAAGGGCATTTAAGGAAAGCCCCATGGGCCGGCGCCCTTCCTCGCCTCCAATTCATGCTAAGTCGTCCTTCGTTTTTCAACCCTTAGATGAATACCCAACTTCTTCAGGATATCCAACTTCTTCAGGTTCGCCTATGGATGATCCTGATGTGTGGAGGCCACCAAGTAGGGACACTTCAAATAGAAGAAATGCAAAGGCTGGTCAGGTTGGTATGAGGAAGTCACCACAAGATGGAAATTGGGCTCGGAGTTCTGCAACAAAAGCAGGCACACCTGGCCGTGGTGCAAAGGCTGGTGGATCAAGTAGGGCTAACTCAGCGGTCCGGTCTTCTACTCCTGGCAAGAAAGACACCCGATCTGGAAAATCTAGCAAGGCAGATTCAGCGAATGGTGATGCTGAGGATGGAAAGCCAAAGAGGCAGTATGAGGGACCTGATCCTGATTTGGCTGAAATGCTTGAAAGGGATGTTCTGGAAACCAGCCCTGGAGTGAGATGGGATGATGTTGCTGGCCTGACTGAAGCAAAAAGACTTCTGGAGGAAGCCGTTGTTCTTCCTTTGTGGATGCCAGAATATTTTCAGGGGATCAGGAGACCATGGAAGGGTGTTCTTATGTTTGGTCCTCCTGGAACTGGAAAGACATTACTTGCTAAAGCTGTTGCTACTGAGTGTGGCACAACAACTTTTTTCAATGTCTCCTCTGCTACATTGGCTTCAAAGTGGCGTGGAGAAAGTGAACGAATGGTTCGGTGCTTATTTGATCTTGCAAGAGCTTATGCGCCGAGTACAATCTTCATAGATGAAATTGATTCTCTCTGCAATTCCCGGGGGGCATCAGGAGAGCATGAGTCCTCCAGAAGGGTGAAATCTGAACTTCTGGTCCAGGTTGATGGTGTAAATGCCACTTCCACAAATGAAGATGGTACTCGTAAAATAGTGATGGTTCTGGCAGCTACTAACTTTCCATGGGACATTGATGAGGCACTCAGGAGGAGACTGGAGAAGCGTATTTATATCCCTCTTCCAAATTTTGAGAGCCGTAAAGAGCTTATTCGGATAAATTTGAAAACAGTTGAGGTTGCTCAAGATGTAAACATTGATGATGTGGCTCGCCGAACAGATGGATATAGTGGTGACGATCTCACAAACGTTTGCCGTGATGCTTCCTTGAATGGGATGAGGAGGAAAATAGCTGGAAAGACACGTGATGAGATCAAGAGCATGTCGAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCCTTGGTGAAGGTCCAACGGAGTGTTTCTCAATCTGATATTGAACGGCATGAAAAATGGTTTTCAGAGTTTGGGTCAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0009653 GO:0009825 GO:0009832 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0016043 GO:0016049 GO:0030154 GO:0030865 GO:0031122 GO:0032502 GO:0032989 GO:0040007 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044085 GO:0044424 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0071554 GO:0071669 GO:0071840 GO:0090558 GO:0090626 GO:0097435

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Aminotran_1_2 Vps4_C

Protein Analysis

538

Amino Acids

59.61

Weight (kDa)

8.31

Isoelectric Point (pI)

52.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KATNA1_MIT	PF21126	11 - 82	5.2e-09	Katanin p60 subunit A1, MIT domain
AAA	PF00004	289 - 427	4.5e-37	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	449 - 491	2.6e-12	AAA+ lid domain
Vps4_C	PF09336	492 - 536	1e-09	Vps4 C terminal oligomerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80350
fragaria_vesca	FvH4_6g30820 FvH4_6g30820
malus_domestica	MD09G1216700.v1.1 MD17G1198800.v1.1
prunus_persica	Prupe.3G075400_v2.0.a1
pyrus_communis	pycom09g13400 pycom17g20350
rosa_chinensis	RchiOBHm_Chr2g0137251
rosa_laevigata	RLG00000019638
rosa_multiflora	Rmu_sc0000894.1_g000020
rosa_roxburghii	Rroxscaffold_2G00107270
rosa_rugosa	Rorug02G0339900 Rorug02G0340000
rosa_samantha	Rh2BG396400
rosa_wichuraiana	Rw2G031850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	291
AccB7I	CCANNNNNTGG	1 cut(s)	491
AccII	CGCG	1 cut(s)	59
AciI	CCGC	2 cut(s)	103, 578
AclI	AACGTT	1 cut(s)	1407
AclWI	GGATC	6 cut(s)	395, 565, 689, 851, 1499, 1512
AcoI	YGGCCR	1 cut(s)	535
AcsI	RAATTY	2 cut(s)	1285, 1318
AcuI	CTGAAG	4 cut(s)	59, 348, 366, 798
AcvI	CACGTG	1 cut(s)	1463
AcyI	GRCGYC	1 cut(s)	292
AdeI	CACNNNGTG	1 cut(s)	146
AfaI	GTAC	3 cut(s)	56, 1045, 1183
AfiI	CCNNNNNNNGG	9 cut(s)	43, 261, 288, 491, 539, 860, 890, 1116, 1431
AflIII	ACRYGT	1 cut(s)	1460
AjnI	CCWGG	5 cut(s)	532, 595, 742, 883, 1140
AloI	GAACNNNNNNTCC	2 cut(s)	1122, 1154
AluBI	AGCT	6 cut(s)	43, 914, 1031, 1211, 1306, 1451
AluI	AGCT	6 cut(s)	43, 914, 1031, 1211, 1306, 1451
Alw26I	GTCTC	3 cut(s)	844, 958, 1246
AlwI	GGATC	6 cut(s)	395, 565, 689, 851, 1499, 1512
Ama87I	CYCGRG	1 cut(s)	1083
AoxI	GGCC	4 cut(s)	286, 416, 535, 769
ApeKI	GCWGC	1 cut(s)	1208
ApoI	RAATTY	2 cut(s)	1285, 1318
Asp700I	GAANNNNTTC	1 cut(s)	834
AspLEI	GCGC	2 cut(s)	294, 1039
AspS9I	GGNCC	7 cut(s)	8, 286, 580, 689, 878, 1138, 1546
AsuC2I	CCSGG	2 cut(s)	1084, 1085
AsuHPI	GGTGA	5 cut(s)	474, 662, 1132, 1403, 1552
AvaI	CYCGRG	1 cut(s)	1083
AvaII	GGWCC	6 cut(s)	8, 580, 689, 878, 1138, 1546
BamHI	GGATCC	1 cut(s)	1504
BanI	GGYRCC	1 cut(s)	291
BanII	GRGCYC	2 cut(s)	72, 505
BarI	GAAGNNNNNNTAC	2 cut(s)	418, 450
BbrPI	CACGTG	1 cut(s)	1463
BbsI	GAAGAC	1 cut(s)	579
BbvCI	CCTCAGC	1 cut(s)	657
BbvI	GCAGC	1 cut(s)	1220
BccI	CCATC	8 cut(s)	55, 485, 656, 747, 1142, 1172, 1192, 1373
BceAI	ACGGC	5 cut(s)	522, 788, 1281, 1398, 1595
BciT130I	CCWGG	5 cut(s)	534, 597, 744, 885, 1142
BcnI	CCSGG	2 cut(s)	1084, 1085
BcoDI	GTCTC	3 cut(s)	844, 958, 1246
BfaI	CTAG	2 cut(s)	248, 627
BfoI	RGCGCY	1 cut(s)	295
BglI	GCCNNNNNGGC	2 cut(s)	285, 676
BisI	GCNGC	2 cut(s)	104, 1209
BlsI	GCNGC	2 cut(s)	105, 1210
Bme1390I	CCNGG	7 cut(s)	534, 597, 744, 885, 1084, 1085, 1142
Bme18I	GGWCC	6 cut(s)	8, 580, 689, 878, 1138, 1546
BmeT110I	CYCGRG	1 cut(s)	1083
BmgT120I	GGNCC	7 cut(s)	8, 286, 580, 689, 878, 1138, 1546
BmiI	GGNNCC	4 cut(s)	9, 293, 690, 1506
BmrFI	CCNGG	7 cut(s)	534, 597, 744, 885, 1084, 1085, 1142
BmsI	GCATC	5 cut(s)	241, 643, 813, 1100, 1408
BpiI	GAAGAC	1 cut(s)	579
BplI	GAGNNNNNCTC	2 cut(s)	1546, 1578
BpmI	CTGGAG	4 cut(s)	765, 815, 1096, 1277
Bpu10I	CCTNAGC	1 cut(s)	657
BpuEI	CTTGAG	1 cut(s)	1326
BpuMI	CCSGG	2 cut(s)	1084, 1085
BsaAI	YACGTR	1 cut(s)	1463
BsaHI	GRCGYC	1 cut(s)	292
BsaI	GGTCTC	1 cut(s)	844
BsaJI	CCNNGG	9 cut(s)	222, 282, 538, 742, 854, 1083, 1084, 1223, 1536
BsaWI	WCCGGW	1 cut(s)	582
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	9 cut(s)	43, 261, 288, 491, 539, 860, 890, 1116, 1431
Bse118I	RCCGGY	1 cut(s)	288
Bse1I	ACTGG	2 cut(s)	895, 1260
Bse3DI	GCAATG	1 cut(s)	106
BseBI	CCWGG	5 cut(s)	534, 597, 744, 885, 1142
BseDI	CCNNGG	9 cut(s)	222, 282, 538, 742, 854, 1083, 1084, 1223, 1536
BseGI	GGATG	8 cut(s)	204, 403, 667, 730, 763, 828, 1440, 1495
BseLI	CCNNNNNNNGG	9 cut(s)	43, 261, 288, 491, 539, 860, 890, 1116, 1431
BseMI	GCAATG	1 cut(s)	106
BseMII	CTCAG	5 cut(s)	126, 588, 648, 915, 1258
BseNI	ACTGG	2 cut(s)	895, 1260
BseRI	GAGGAG	3 cut(s)	946, 1264, 1453
BseXI	GCAGC	1 cut(s)	1220
Bsh1236I	CGCG	1 cut(s)	59
BshFI	GGCC	4 cut(s)	288, 418, 537, 771
BshNI	GGYRCC	1 cut(s)	291
BsiHKCI	CYCGRG	1 cut(s)	1083
BsiSI	CCGG	3 cut(s)	289, 583, 1084
BslFI	GGGAC	3 cut(s)	443, 702, 1241
BslI	CCNNNNNNNGG	9 cut(s)	43, 261, 288, 491, 539, 860, 890, 1116, 1431
BsmAI	GTCTC	3 cut(s)	844, 958, 1246
BsmFI	GGGAC	3 cut(s)	443, 702, 1241
BsnI	GGCC	4 cut(s)	288, 418, 537, 771
Bso31I	GGTCTC	1 cut(s)	844
BsoBI	CYCGRG	1 cut(s)	1083
Bsp1286I	GDGCHC	2 cut(s)	72, 505
Bsp19I	CCATGG	3 cut(s)	282, 854, 1223
BspACI	CCGC	2 cut(s)	103, 578
BspANI	GGCC	4 cut(s)	288, 418, 537, 771
BspCNI	CTCAG	5 cut(s)	125, 587, 649, 916, 1257
BspFNI	CGCG	1 cut(s)	59
BspLI	GGNNCC	4 cut(s)	9, 293, 690, 1506
BspPI	GGATC	6 cut(s)	395, 565, 689, 851, 1499, 1512
BspT107I	GGYRCC	1 cut(s)	291
BspTNI	GGTCTC	1 cut(s)	844
BsrDI	GCAATG	1 cut(s)	106
BsrFI	RCCGGY	1 cut(s)	288
BsrI	ACTGG	2 cut(s)	895, 1260
BssAI	RCCGGY	1 cut(s)	288
BssECI	CCNNGG	9 cut(s)	222, 282, 538, 742, 854, 1083, 1084, 1223, 1536
BssNI	GRCGYC	1 cut(s)	292
BssT1I	CCWWGG	4 cut(s)	282, 854, 1223, 1536
Bst2UI	CCWGG	5 cut(s)	534, 597, 744, 885, 1142
Bst4CI	ACNGT	1 cut(s)	1330
Bst6I	CTCTTC	1 cut(s)	1284
BstACI	GRCGYC	1 cut(s)	292
BstBAI	YACGTR	1 cut(s)	1463
BstC8I	GCNNGC	5 cut(s)	45, 290, 526, 769, 1369
BstDEI	CTNAG	7 cut(s)	112, 318, 343, 574, 657, 924, 1244
BstDSI	CCRYGG	4 cut(s)	282, 538, 854, 1223
BstENI	CCTNNNNNAGG	1 cut(s)	1114
BstF5I	GGATG	8 cut(s)	204, 403, 667, 730, 763, 828, 1440, 1495
BstFNI	CGCG	1 cut(s)	59
BstH2I	RGCGCY	1 cut(s)	295
BstHHI	GCGC	2 cut(s)	294, 1039
BstMAI	GTCTC	3 cut(s)	844, 958, 1246
BstMWI	GCNNNNNNNGC	7 cut(s)	285, 521, 534, 575, 641, 676, 968
BstNI	CCWGG	5 cut(s)	534, 597, 744, 885, 1142
BstNSI	RCATGY	1 cut(s)	1483
BstSCI	CCNGG	7 cut(s)	532, 595, 742, 883, 1082, 1083, 1140
BstUI	CGCG	1 cut(s)	59
BstV1I	GCAGC	1 cut(s)	1220
BstV2I	GAAGAC	1 cut(s)	579
BstX2I	RGATCY	1 cut(s)	1504
BstXI	CCANNNNNNTGG	1 cut(s)	1148
BstYI	RGATCY	1 cut(s)	1504
BsuRI	GGCC	4 cut(s)	288, 418, 537, 771
BtgI	CCRYGG	4 cut(s)	282, 538, 854, 1223
BtgZI	GCGATG	1 cut(s)	74
BtsCI	GGATG	8 cut(s)	204, 403, 667, 730, 763, 828, 1440, 1495
Cac8I	GCNNGC	5 cut(s)	45, 290, 526, 769, 1369
CfoI	GCGC	2 cut(s)	294, 1039
Cfr10I	RCCGGY	1 cut(s)	288
Cfr13I	GGNCC	7 cut(s)	8, 286, 580, 689, 878, 1138, 1546
Cfr9I	CCCGGG	1 cut(s)	1083
CpoI	CGGWCCG	1 cut(s)	580
CseI	GACGC	1 cut(s)	22
Csp6I	GTAC	3 cut(s)	55, 1044, 1182
CspI	CGGWCCG	1 cut(s)	580
CviAII	CATG	9 cut(s)	85, 283, 314, 855, 1103, 1224, 1480, 1516, 1583
CviQI	GTAC	3 cut(s)	55, 1044, 1182
DdeI	CTNAG	7 cut(s)	112, 318, 343, 574, 657, 924, 1244
DinI	GGCGCC	1 cut(s)	293
DraIII	CACNNNGTG	1 cut(s)	146
EaeI	YGGCCR	1 cut(s)	535
Eam1104I	CTCTTC	1 cut(s)	1284
EarI	CTCTTC	1 cut(s)	1284
Eco130I	CCWWGG	4 cut(s)	282, 854, 1223, 1536
Eco24I	GRGCYC	2 cut(s)	72, 505
Eco31I	GGTCTC	1 cut(s)	844
Eco32I	GATATC	1 cut(s)	371
Eco47I	GGWCC	6 cut(s)	8, 580, 689, 878, 1138, 1546
Eco57I	CTGAAG	4 cut(s)	59, 348, 366, 798
Eco72I	CACGTG	1 cut(s)	1463
Eco88I	CYCGRG	1 cut(s)	1083
EcoNI	CCTNNNNNAGG	1 cut(s)	1114
EcoO109I	RGGNCCY	1 cut(s)	689
EcoRII	CCWGG	5 cut(s)	532, 595, 742, 883, 1140
EcoRV	GATATC	1 cut(s)	371
EcoT14I	CCWWGG	4 cut(s)	282, 854, 1223, 1536
EcoT38I	GRGCYC	2 cut(s)	72, 505
EgeI	GGCGCC	1 cut(s)	293
EheI	GGCGCC	1 cut(s)	293
ErhI	CCWWGG	4 cut(s)	282, 854, 1223, 1536
FaeI	CATG	9 cut(s)	88, 286, 317, 858, 1106, 1227, 1483, 1519, 1586
FalI	AAGNNNNNCTT	2 cut(s)	311, 343
FaqI	GGGAC	3 cut(s)	443, 702, 1241
FatI	CATG	9 cut(s)	84, 282, 313, 854, 1102, 1223, 1479, 1515, 1582
Fnu4HI	GCNGC	2 cut(s)	104, 1209
FokI	GGATG	8 cut(s)	211, 410, 674, 737, 770, 835, 1447, 1502
FriOI	GRGCYC	2 cut(s)	72, 505
Fsp4HI	GCNGC	2 cut(s)	104, 1209
FspBI	CTAG	2 cut(s)	248, 627
GlaI	GCGC	2 cut(s)	293, 1038
GluI	GCNGC	2 cut(s)	104, 1209
GsuI	CTGGAG	4 cut(s)	765, 815, 1096, 1277
HaeII	RGCGCY	1 cut(s)	295
HaeIII	GGCC	4 cut(s)	288, 418, 537, 771
HapII	CCGG	3 cut(s)	289, 583, 1084
HgaI	GACGC	1 cut(s)	22
HhaI	GCGC	2 cut(s)	294, 1039
Hin1I	GRCGYC	1 cut(s)	292
Hin1II	CATG	9 cut(s)	88, 286, 317, 858, 1106, 1227, 1483, 1519, 1586
Hin6I	GCGC	2 cut(s)	292, 1037
HinP1I	GCGC	2 cut(s)	292, 1037
HinfI	GANTC	4 cut(s)	184, 638, 1067, 1106
HpaII	CCGG	3 cut(s)	289, 583, 1084
HphI	GGTGA	5 cut(s)	474, 662, 1132, 1403, 1552
Hpy166II	GTNNAC	2 cut(s)	995, 1351
Hpy188I	TCNGA	8 cut(s)	12, 115, 223, 507, 1129, 1314, 1570, 1600
Hpy8I	GTNNAC	2 cut(s)	995, 1351
Hpy99I	CGWCG	2 cut(s)	16, 101
HpyAV	CCTTC	9 cut(s)	59, 205, 255, 306, 337, 853, 1110, 1480, 1537
HpyCH4III	ACNGT	1 cut(s)	1330
HpyCH4IV	ACGT	2 cut(s)	1407, 1462
HpyCH4V	TGCA	7 cut(s)	28, 157, 452, 515, 545, 1025, 1077
HpyF10VI	GCNNNNNNNGC	7 cut(s)	285, 521, 534, 575, 641, 676, 968
HpyF3I	CTNAG	7 cut(s)	112, 318, 343, 574, 657, 924, 1244
HpySE526I	ACGT	2 cut(s)	1407, 1462
Hsp92I	GRCGYC	1 cut(s)	292
Hsp92II	CATG	9 cut(s)	88, 286, 317, 858, 1106, 1227, 1483, 1519, 1586
HspAI	GCGC	2 cut(s)	292, 1037
KasI	GGCGCC	1 cut(s)	291
KroI	GCCGGC	1 cut(s)	288
KroNI	GCCGGC	1 cut(s)	290
Lsp1109I	GCAGC	1 cut(s)	1220
LweI	GCATC	5 cut(s)	241, 643, 813, 1100, 1408
MaeI	CTAG	2 cut(s)	248, 627
MaeII	ACGT	2 cut(s)	1407, 1462
MaeIII	GTNAC	2 cut(s)	480, 1391
MflI	RGATCY	1 cut(s)	1504
MhlI	GDGCHC	2 cut(s)	72, 505
MluCI	AATT	6 cut(s)	309, 496, 1062, 1078, 1285, 1318
Mly113I	GGCGCC	1 cut(s)	292
MlyI	GAGTC	1 cut(s)	1115
MmeI	TCCRAC	4 cut(s)	35, 160, 398, 1573
MroNI	GCCGGC	1 cut(s)	288
MroXI	GAANNNNTTC	1 cut(s)	834
MseI	TTAA	2 cut(s)	161, 270
MslI	CAYNNNNRTG	1 cut(s)	83
MspA1I	CMGCKG	1 cut(s)	578
MspI	CCGG	3 cut(s)	289, 583, 1084
MspR9I	CCNGG	7 cut(s)	534, 597, 744, 885, 1084, 1085, 1142
MvaI	CCWGG	5 cut(s)	534, 597, 744, 885, 1142
MvnI	CGCG	1 cut(s)	59
MwoI	GCNNNNNNNGC	7 cut(s)	285, 521, 534, 575, 641, 676, 968
NaeI	GCCGGC	1 cut(s)	290
NarI	GGCGCC	1 cut(s)	292
NciI	CCSGG	2 cut(s)	1084, 1085
NcoI	CCATGG	3 cut(s)	282, 854, 1223
NgoMIV	GCCGGC	1 cut(s)	288
NlaIII	CATG	9 cut(s)	88, 286, 317, 858, 1106, 1227, 1483, 1519, 1586
NlaIV	GGNNCC	4 cut(s)	9, 293, 690, 1506
NmeAIII	GCCGAG	2 cut(s)	280, 1065
NmuCI	GTSAC	2 cut(s)	480, 1391
NspI	RCATGY	1 cut(s)	1483
PdiI	GCCGGC	1 cut(s)	290
PdmI	GAANNNNTTC	1 cut(s)	834
PfeI	GAWTC	3 cut(s)	184, 638, 1067
PflMI	CCANNNNNTGG	1 cut(s)	491
PfoI	TCCNGGA	1 cut(s)	883
PkrI	GCNGC	2 cut(s)	105, 1210
PleI	GAGTC	1 cut(s)	1114
PluTI	GGCGCC	1 cut(s)	295
PmaCI	CACGTG	1 cut(s)	1463
PmlI	CACGTG	1 cut(s)	1463
PpsI	GAGTC	1 cut(s)	1114
Ppu21I	YACGTR	1 cut(s)	1463
PpuMI	RGGWCCY	1 cut(s)	689
Psp1406I	AACGTT	1 cut(s)	1407
Psp5II	RGGWCCY	1 cut(s)	689
Psp6I	CCWGG	5 cut(s)	532, 595, 742, 883, 1140
PspCI	CACGTG	1 cut(s)	1463
PspGI	CCWGG	5 cut(s)	532, 595, 742, 883, 1140
PspN4I	GGNNCC	4 cut(s)	9, 293, 690, 1506
PspPI	GGNCC	7 cut(s)	8, 286, 580, 689, 878, 1138, 1546
PspPPI	RGGWCCY	1 cut(s)	689
PsuI	RGATCY	1 cut(s)	1504
RsaI	GTAC	3 cut(s)	56, 1045, 1183
RsaNI	GTAC	3 cut(s)	55, 1044, 1182
RseI	CAYNNNNRTG	1 cut(s)	83
Rsr2I	CGGWCCG	1 cut(s)	580
RsrII	CGGWCCG	1 cut(s)	580
SaqAI	TTAA	2 cut(s)	161, 270
SatI	GCNGC	2 cut(s)	104, 1209
Sau96I	GGNCC	7 cut(s)	8, 286, 580, 689, 878, 1138, 1546
SchI	GAGTC	1 cut(s)	1115
ScrFI	CCNGG	7 cut(s)	534, 597, 744, 885, 1084, 1085, 1142
SduI	GDGCHC	2 cut(s)	72, 505
SfaNI	GCATC	5 cut(s)	241, 643, 813, 1100, 1408
SfoI	GGCGCC	1 cut(s)	293
SinI	GGWCC	6 cut(s)	8, 580, 689, 878, 1138, 1546
SmaI	CCCGGG	1 cut(s)	1085
SmiMI	CAYNNNNRTG	1 cut(s)	83
SmlI	CTYRAG	1 cut(s)	1341
SmoI	CTYRAG	1 cut(s)	1341
Sse9I	AATT	6 cut(s)	309, 496, 1062, 1078, 1285, 1318
SsiI	CCGC	2 cut(s)	103, 578
SspDI	GGCGCC	1 cut(s)	291
SspI	AATATT	1 cut(s)	833
SspMI	CTAG	2 cut(s)	248, 627
StyD4I	CCNGG	7 cut(s)	532, 595, 742, 883, 1082, 1083, 1140
StyI	CCWWGG	4 cut(s)	282, 854, 1223, 1536
TaaI	ACNGT	1 cut(s)	1330
TaiI	ACGT	2 cut(s)	1410, 1465
TaqI	TCGA	2 cut(s)	96, 1484
TasI	AATT	6 cut(s)	309, 496, 1062, 1078, 1285, 1318
TatI	WGTACW	1 cut(s)	1043
TauI	GCSGC	1 cut(s)	106
TfiI	GAWTC	3 cut(s)	184, 638, 1067
Tru1I	TTAA	2 cut(s)	161, 270
Tru9I	TTAA	2 cut(s)	161, 270
TseFI	GTSAC	2 cut(s)	480, 1391
TseI	GCWGC	1 cut(s)	1208
Tsp45I	GTSAC	2 cut(s)	480, 1391
TspDTI	ATGAA	7 cut(s)	215, 302, 363, 1042, 1074, 1188, 1599
TspGWI	ACGGA	1 cut(s)	1567
TspMI	CCCGGG	1 cut(s)	1083
Van91I	CCANNNNNTGG	1 cut(s)	491
VpaK11BI	GGWCC	6 cut(s)	8, 580, 689, 878, 1138, 1546
XagI	CCTNNNNNAGG	1 cut(s)	1114
XapI	RAATTY	2 cut(s)	1285, 1318
XceI	RCATGY	1 cut(s)	1483
XmaI	CCCGGG	1 cut(s)	1083
XmnI	GAANNNNTTC	1 cut(s)	834
XspI	CTAG	2 cut(s)	248, 627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.