Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013291

Physical Location & Seq

Genomic Coordinates Reverse (-)

158183 .. 160870

Gene Structure 2688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G01330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCGAAACTCCTCGAGACCTTTCCTTGTGTTCCCTCCACCGAACGAGGCCGCGGCATTTTGATCTCCGGCGATTCCAAATCCGACACCATTCTCTACTGCAACGGCCGCTCTGTCTTCATCCGGAGCCTCCGCCAACTCCAAGACGTCCAAGTTTACGGCGAACATGGCTATGCTGTTACCGTTGCTCGCTACTCTCCCAACGGCGAATGGATCGCTTCCGCTGATGTCTCTGGTACTGTTCGCGTTTGGGGAACGCACAACGGCTTCGTGCTGAAGAACGAGTTCAGAGTCCTTGCTGGTCGTGTCGATGATCTCCAATGGTCTTTCGATGGACTTCGAATTGTTGCTTCCGGCGATGGAAAAGGCAAATCTCTTGTTCGATCCTTCGCATGGGACTCTGGCAATACAATGGGGGATTTTGATGGCCATTCTCGTAGGGTTTTGAGTTGTGCCTTCAAGCCAACGAGACCTTTCCGAATTGCCACATGCGGTGAAGACTTCTTGGTTAACTTTTATGATGGACCACCTTTTAAGTTTCACTCTTCTCACAGGGAGCATTCCAACTTCGTCAACTGCATCAGATATTCACCTGATGGTACTAAATTCATTACCGTAAGCTCTGACAAAAAGGGTATGATTTACGATGGCAAGACTGGAGATAAAGTTGGAGAATTGGCCTCAGAAGATGGTCACAAAGGCAGTATCTACGCTGTTAGCTGGAGTCCTGACAGCAAACGGGTGCTTACTGTGTCTGCTGATAAGTCTGCCAAAGTATGGGAGGTAGCTGAAGATGGAACTATTGGCTCTGTAATTAAGACATTGTCGTTTATGGAATCTGGTGGAGCAGAAGACATGCTTGTGGGATGTCTTTGGCAGAATGATCATCTCATTACCGTGTCTCTTGGCGGTACTATGTCCTTGTTCTCTGCAGATGATATGGATAAGCCTCCCTTGCTGTTATCTGGACATATTAAGAACGTCACTTCTTTGGCTGTTCTTGGGGAAAACCAGAAGACGATTCTGTCTTGTAGCTATGATGGTCTCATTGTCAAATGGCTAAAAGGGGTTGGGTACAGTTGCAAGTTACAAATGAAAGACACCAAAATCAAGCGATTAGCGGCTACTGAATCTAGCATTTTCATATCTGGATATGATAATATGGTTTGGAGAATTCCTTTAACCGACAACGGATATGGAGCTGCAGAACATGTCGATATAGGCCATCAGCCTCTGGACATAAGCATAGCCGTTGATTCTCCCGAAGCCACAGCACTAGTCTCGTTTGATTCCGGAGTTGTATTGCTCAATGGTCTGAACATTTTGAGCAAGATCGATTTGGGTTTTGCTGTGGCAGCCTCTGTGATCTCACCTGACGGGAAAGAAGCGATTGTAGGAGGGCAAGACGGGAAGTTACACATATACTCAGTCTCAGGGGACAACAACCTCAAAGAGGAAGCAGTCCTGGAGAAACACAGAGGTGCTTTGACAGTGATACGTTACTCTCCTGACTTAACAATGTTTGCTTCTGGTGATGCCAACCGCGAAGCTGTAGTCTGGGATCGCGAGACCAAACAGGTGAAGCTAAACAACATGTTGTTCCACACGGCTCGTATAAACAGCTTGGCATGGTCACCAAACAACAAGATGGTAGCCACAGGGTCCATAGACACTTGCGTCATTGTATATGAAGTGGACAAGCCAGCTTCAAGTCGCATAACCGCAAGAAACGCTCATCTCGGTGGAGTGAACGCAGTCGCCTTCATTGATGATTGCACCGTAGCAAGTTCCGGAGAAGACGCTTCCGTTCGTTTGTGGCATATCGAACCTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005884 GO:0005938 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0008154 GO:0009987 GO:0010638 GO:0015629 GO:0016043 GO:0022411 GO:0030029 GO:0030036 GO:0030042 GO:0030832 GO:0030834 GO:0030836 GO:0030863 GO:0030864 GO:0031461 GO:0032535 GO:0032956 GO:0032970 GO:0032984 GO:0032991 GO:0033043 GO:0042641 GO:0042643 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043243 GO:0043244 GO:0043624 GO:0043933 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0044877 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051015 GO:0051128 GO:0051130 GO:0051261 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080008 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:0110053 GO:1901879 GO:1901881 GO:1902494 GO:1902903 GO:1902905 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

611

Amino Acids

66.39

Weight (kDa)

5.99

Isoelectric Point (pI)

32.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	27 - 199	9.9e-10	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	38 - 174	1.4e-07	WDR3 first beta-propeller domain
Beta-prop_EML	PF23409	53 - 262	2.5e-12	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR5	PF25175	55 - 228	2.3e-21	WDR5 beta-propeller domain
WD40_Gbeta	PF25391	102 - 265	2.1e-10	G protein beta WD-40 repeat protein
Beta-prop_THOC3	PF25174	102 - 174	6.2e-06	THOC3 beta-propeller domain
WD40_Prp19	PF24814	127 - 264	3.4e-12	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	146 - 353	1.7e-13	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	161 - 268	8.1e-11	WDR3 first beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	178 - 267	2.1e-07	CAF1B/HIR1 beta-propeller domain
WDR55	PF24796	179 - 389	7.3e-09	WDR55
WD40_CDC20-Fz	PF24807	181 - 350	2.1e-06	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	184 - 264	4.9e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	185 - 363	2.1e-18	WDR5 beta-propeller domain
Beta-prop_EML	PF23409	185 - 389	1.5e-08	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3	PF25174	187 - 270	1.4e-12	THOC3 beta-propeller domain
EIF3I	PF24805	187 - 373	4.7e-12	EIF3I
Beta-prop_IFT122_1st	PF23381	189 - 266	2.2e-07	IFT122 first beta-propeller
Beta-prop_TEP1_2nd	PF25047	224 - 375	1.6e-09	TEP-1 second beta-propeller
WD40	PF00400	230 - 260	2.5e-07	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	231 - 355	6.8e-07	WDR3 second beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	439 - 566	5.7e-07	WDR3 second beta-propeller domain
Beta-prop_EML_2	PF23414	440 - 566	8.3e-11	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st	PF25173	451 - 608	7.3e-19	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	451 - 609	1.3e-19	WDR5 beta-propeller domain
WD40_Gbeta	PF25391	451 - 608	9.5e-12	G protein beta WD-40 repeat protein
WD40_CDC20-Fz	PF24807	456 - 609	3.6e-15	CDC20/Fizzy WD40 domain
WDR55	PF24796	456 - 564	2.9e-06	WDR55
WD40_WDHD1_1st	PF24817	456 - 610	2.3e-12	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_1st	PF25171	464 - 608	2.9e-07	WDR36/Utp21 first beta-propeller
Beta-prop_CAF1B_HIR1	PF24105	465 - 609	3.7e-11	CAF1B/HIR1 beta-propeller domain
WD40_MABP1-WDR62_1st	PF24780	482 - 609	1e-06	MABP1/WDR62 first WD40 domain
Beta-prop_THOC3	PF25174	535 - 609	1.4e-11	THOC3 beta-propeller domain
WD40_Prp19	PF24814	537 - 609	5.2e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01330 AT3G18060
fragaria_vesca	FvH4_5g17110
malus_domestica	MD06G1229500.v1.1 MD14G1234400.v1.1
prunus_persica	Prupe.5G230600_v2.0.a1 Prupe.5G230600_v2.0.a1 Prupe.5G230600_v2.0.a1
pyrus_communis	pycom06g20050 pycom14g19520
rosa_chinensis	RchiOBHm_Chr7g0178701
rosa_laevigata	RLG00000005421
rosa_multiflora	Rmu_sc0002320.1_g000019
rosa_roxburghii	Rroxscaffold_3G00274660
rosa_rugosa	Rorug06G0418700
rosa_samantha	Rh7AG018100 Rh7BG017600
rosa_wichuraiana	Rw7G001460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1024, 1676
AatII	GACGTC	1 cut(s)	150
AccB7I	CCANNNNNTGG	1 cut(s)	777
AccBSI	CCGCTC	1 cut(s)	111
AccII	CGCG	4 cut(s)	54, 246, 1545, 1566
AccIII	TCCGGA	3 cut(s)	123, 1292, 1790
AclWI	GGATC	3 cut(s)	221, 378, 1569
AcoI	YGGCCR	2 cut(s)	106, 427
AcsI	RAATTY	2 cut(s)	605, 1173
AcuI	CTGAAG	2 cut(s)	296, 810
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	4 cut(s)	238, 601, 913, 1076
AfiI	CCNNNNNNNGG	3 cut(s)	393, 777, 1453
AflIII	ACRYGT	2 cut(s)	1210, 1593
AgsI	TTSAA	2 cut(s)	460, 1710
AhlI	ACTAGT	1 cut(s)	1276
AjnI	CCWGG	1 cut(s)	1464
AleI	CACNNNNGTG	1 cut(s)	1479
AluBI	AGCT	9 cut(s)	621, 720, 788, 1035, 1202, 1550, 1585, 1623, 1706
AluI	AGCT	9 cut(s)	621, 720, 788, 1035, 1202, 1550, 1585, 1623, 1706
Alw26I	GTCTC	8 cut(s)	11, 235, 463, 906, 1049, 1285, 1435, 1562
AlwI	GGATC	3 cut(s)	221, 378, 1569
AlwNI	CAGNNNCTG	2 cut(s)	1234, 1361
Ama87I	CYCGRG	1 cut(s)	14
Aor13HI	TCCGGA	3 cut(s)	123, 1292, 1790
AoxI	GGCC	5 cut(s)	49, 106, 427, 678, 1222
ApeKI	GCWGC	2 cut(s)	1202, 1355
ApoI	RAATTY	2 cut(s)	605, 1173
ArsI	GACNNNNNNTTYG	2 cut(s)	1539, 1571
Asp700I	GAANNNNTTC	1 cut(s)	284
AspS9I	GGNCC	2 cut(s)	524, 1662
AsuHPI	GGTGA	6 cut(s)	506, 582, 1362, 1544, 1591, 1626
AsuII	TTCGAA	1 cut(s)	340
AvaI	CYCGRG	1 cut(s)	14
AvaII	GGWCC	2 cut(s)	524, 1662
BalI	TGGCCA	1 cut(s)	429
BbsI	GAAGAC	5 cut(s)	109, 504, 858, 1022, 1803
BbvI	GCAGC	2 cut(s)	1189, 1367
BceAI	ACGGC	6 cut(s)	121, 175, 220, 280, 1235, 1623
BcgI	CGANNNNNNTGC	2 cut(s)	1263, 1297
BciT130I	CCWGG	1 cut(s)	1466
BclI	TGATCA	1 cut(s)	883
BcoDI	GTCTC	8 cut(s)	11, 235, 463, 906, 1049, 1285, 1435, 1562
BcuI	ACTAGT	1 cut(s)	1276
BfaI	CTAG	2 cut(s)	1134, 1277
BfmI	CTRYAG	3 cut(s)	930, 1203, 1551
BisI	GCNGC	6 cut(s)	52, 55, 109, 1122, 1203, 1356
BlsI	GCNGC	6 cut(s)	53, 56, 110, 1123, 1204, 1357
Bme1390I	CCNGG	1 cut(s)	1466
Bme18I	GGWCC	2 cut(s)	524, 1662
BmeT110I	CYCGRG	1 cut(s)	14
BmgT120I	GGNCC	2 cut(s)	524, 1662
BmiI	GGNNCC	2 cut(s)	128, 1663
BmrFI	CCNGG	1 cut(s)	1466
BmsI	GCATC	2 cut(s)	588, 1525
BpiI	GAAGAC	5 cut(s)	109, 504, 858, 1022, 1803
BpmI	CTGGAG	3 cut(s)	678, 742, 1487
Bpu14I	TTCGAA	1 cut(s)	340
Bsa29I	ATCGAT	1 cut(s)	1335
BsaHI	GRCGYC	1 cut(s)	147
BsaI	GGTCTC	4 cut(s)	11, 463, 1049, 1562
BsaJI	CCNNGG	1 cut(s)	52
BsaWI	WCCGGW	3 cut(s)	123, 1292, 1790
BsaXI	ACNNNNNCTCC	2 cut(s)	651, 681
Bsc4I	CCNNNNNNNGG	3 cut(s)	393, 777, 1453
Bse1I	ACTGG	1 cut(s)	661
BseAI	TCCGGA	3 cut(s)	123, 1292, 1790
BseBI	CCWGG	1 cut(s)	1466
BseCI	ATCGAT	1 cut(s)	1335
BseDI	CCNNGG	1 cut(s)	52
BseGI	GGATG	2 cut(s)	120, 872
BseLI	CCNNNNNNNGG	3 cut(s)	393, 777, 1453
BseMII	CTCAG	3 cut(s)	696, 1440, 1446
BseNI	ACTGG	1 cut(s)	661
BseX3I	CGGCCG	1 cut(s)	106
BseXI	GCAGC	2 cut(s)	1189, 1367
Bsh1236I	CGCG	4 cut(s)	54, 246, 1545, 1566
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	5 cut(s)	51, 108, 429, 680, 1224
BshVI	ATCGAT	1 cut(s)	1335
BsiEI	CGRYCG	1 cut(s)	109
BsiHKCI	CYCGRG	1 cut(s)	14
BsiSI	CCGG	5 cut(s)	69, 124, 354, 1293, 1791
BslFI	GGGAC	2 cut(s)	410, 1451
BslI	CCNNNNNNNGG	3 cut(s)	393, 777, 1453
BsmAI	GTCTC	8 cut(s)	11, 235, 463, 906, 1049, 1285, 1435, 1562
BsmFI	GGGAC	2 cut(s)	410, 1451
BsmI	GAATGC	1 cut(s)	559
BsnI	GGCC	5 cut(s)	51, 108, 429, 680, 1224
Bso31I	GGTCTC	4 cut(s)	11, 463, 1049, 1562
BsoBI	CYCGRG	1 cut(s)	14
Bsp119I	TTCGAA	1 cut(s)	340
Bsp13I	TCCGGA	3 cut(s)	123, 1292, 1790
Bsp143I	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
Bsp68I	TCGCGA	1 cut(s)	1566
BspANI	GGCC	5 cut(s)	51, 108, 429, 680, 1224
BspCNI	CTCAG	3 cut(s)	695, 1439, 1445
BspDI	ATCGAT	1 cut(s)	1335
BspEI	TCCGGA	3 cut(s)	123, 1292, 1790
BspFNI	CGCG	4 cut(s)	54, 246, 1545, 1566
BspLI	GGNNCC	2 cut(s)	128, 1663
BspMAI	CTGCAG	2 cut(s)	934, 1207
BspPI	GGATC	3 cut(s)	221, 378, 1569
BspT104I	TTCGAA	1 cut(s)	340
BspTNI	GGTCTC	4 cut(s)	11, 463, 1049, 1562
BsrBI	CCGCTC	1 cut(s)	111
BsrI	ACTGG	1 cut(s)	661
BssECI	CCNNGG	1 cut(s)	52
BssMI	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
BssNI	GRCGYC	1 cut(s)	147
Bst2UI	CCWGG	1 cut(s)	1466
Bst4CI	ACNGT	8 cut(s)	184, 241, 616, 751, 898, 1079, 1492, 1780
Bst6I	CTCTTC	1 cut(s)	550
BstACI	GRCGYC	1 cut(s)	147
BstBI	TTCGAA	1 cut(s)	340
BstC8I	GCNNGC	2 cut(s)	190, 1704
BstDEI	CTNAG	4 cut(s)	682, 1426, 1432, 1830
BstDSI	CCRYGG	1 cut(s)	52
BstEII	GGTNACC	1 cut(s)	1632
BstENI	CCTNNNNNAGG	1 cut(s)	1451
BstF5I	GGATG	2 cut(s)	120, 872
BstFNI	CGCG	4 cut(s)	54, 246, 1545, 1566
BstKTI	GATC	8 cut(s)	66, 216, 316, 386, 886, 1335, 1368, 1564
BstMAI	GTCTC	8 cut(s)	11, 235, 463, 906, 1049, 1285, 1435, 1562
BstMBI	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
BstMCI	CGRYCG	1 cut(s)	109
BstMWI	GCNNNNNNNGC	5 cut(s)	108, 168, 955, 1355, 1730
BstNI	CCWGG	1 cut(s)	1466
BstNSI	RCATGY	4 cut(s)	492, 859, 1214, 1597
BstPI	GGTNACC	1 cut(s)	1632
BstSCI	CCNGG	1 cut(s)	1464
BstSFI	CTRYAG	3 cut(s)	930, 1203, 1551
BstUI	CGCG	4 cut(s)	54, 246, 1545, 1566
BstV1I	GCAGC	2 cut(s)	1189, 1367
BstV2I	GAAGAC	5 cut(s)	109, 504, 858, 1022, 1803
BstZI	CGGCCG	1 cut(s)	106
Bsu15I	ATCGAT	1 cut(s)	1335
BsuRI	GGCC	5 cut(s)	51, 108, 429, 680, 1224
BsuTUI	ATCGAT	1 cut(s)	1335
BtgI	CCRYGG	1 cut(s)	52
BtgZI	GCGATG	1 cut(s)	372
BtsCI	GGATG	2 cut(s)	120, 872
BtsIMutI	CAGTG	1 cut(s)	1497
BtuMI	TCGCGA	1 cut(s)	1566
Cac8I	GCNNGC	2 cut(s)	190, 1704
CaiI	CAGNNNCTG	2 cut(s)	1234, 1361
Cfr13I	GGNCC	2 cut(s)	524, 1662
Cfr42I	CCGCGG	1 cut(s)	55
ClaI	ATCGAT	1 cut(s)	1335
CseI	GACGC	2 cut(s)	1666, 1808
Csp6I	GTAC	4 cut(s)	237, 600, 912, 1075
CviAII	CATG	7 cut(s)	167, 393, 489, 856, 1211, 1594, 1629
CviQI	GTAC	4 cut(s)	237, 600, 912, 1075
DdeI	CTNAG	4 cut(s)	682, 1426, 1432, 1830
DpnI	GATC	8 cut(s)	65, 215, 315, 385, 885, 1334, 1367, 1563
DpnII	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
DrdI	GACNNNNNNGTC	2 cut(s)	1024, 1676
DseDI	GACNNNNNNGTC	2 cut(s)	1024, 1676
EaeI	YGGCCR	2 cut(s)	106, 427
EagI	CGGCCG	1 cut(s)	106
Eam1104I	CTCTTC	1 cut(s)	550
EarI	CTCTTC	1 cut(s)	550
EciI	GGCGGA	1 cut(s)	122
EclXI	CGGCCG	1 cut(s)	106
Eco31I	GGTCTC	4 cut(s)	11, 463, 1049, 1562
Eco47I	GGWCC	2 cut(s)	524, 1662
Eco52I	CGGCCG	1 cut(s)	106
Eco57I	CTGAAG	2 cut(s)	296, 810
Eco88I	CYCGRG	1 cut(s)	14
Eco91I	GGTNACC	1 cut(s)	1632
EcoNI	CCTNNNNNAGG	1 cut(s)	1451
EcoO65I	GGTNACC	1 cut(s)	1632
EcoRI	GAATTC	1 cut(s)	1173
EcoRII	CCWGG	1 cut(s)	1464
FaeI	CATG	7 cut(s)	170, 396, 492, 859, 1214, 1597, 1632
FalI	AAGNNNNNCTT	4 cut(s)	843, 875, 938, 970
FaqI	GGGAC	2 cut(s)	410, 1451
FatI	CATG	7 cut(s)	166, 392, 488, 855, 1210, 1593, 1628
FbaI	TGATCA	1 cut(s)	883
Fnu4HI	GCNGC	6 cut(s)	52, 55, 109, 1122, 1203, 1356
FokI	GGATG	2 cut(s)	107, 879
Fsp4HI	GCNGC	6 cut(s)	52, 55, 109, 1122, 1203, 1356
FspBI	CTAG	2 cut(s)	1134, 1277
GluI	GCNGC	6 cut(s)	52, 55, 109, 1122, 1203, 1356
GsuI	CTGGAG	3 cut(s)	678, 742, 1487
HaeIII	GGCC	5 cut(s)	51, 108, 429, 680, 1224
HapII	CCGG	5 cut(s)	69, 124, 354, 1293, 1791
HgaI	GACGC	2 cut(s)	1666, 1808
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	7 cut(s)	170, 396, 492, 859, 1214, 1597, 1632
HincII	GTYRAC	2 cut(s)	511, 574
HindII	GTYRAC	2 cut(s)	511, 574
HinfI	GANTC	9 cut(s)	74, 291, 398, 724, 836, 1021, 1130, 1256, 1289
HpaI	GTTAAC	1 cut(s)	511
HpaII	CCGG	5 cut(s)	69, 124, 354, 1293, 1791
HphI	GGTGA	6 cut(s)	506, 582, 1362, 1544, 1591, 1626
Hpy166II	GTNNAC	5 cut(s)	157, 511, 574, 1696, 1750
Hpy188I	TCNGA	7 cut(s)	85, 290, 479, 584, 625, 685, 1317
Hpy8I	GTNNAC	5 cut(s)	157, 511, 574, 1696, 1750
HpyAV	CCTTC	3 cut(s)	397, 466, 1771
HpyCH4III	ACNGT	8 cut(s)	184, 241, 616, 751, 898, 1079, 1492, 1780
HpyCH4IV	ACGT	3 cut(s)	147, 981, 1498
HpyCH4V	TGCA	6 cut(s)	102, 579, 932, 1083, 1205, 1776
HpyF10VI	GCNNNNNNNGC	5 cut(s)	108, 168, 955, 1355, 1730
HpyF3I	CTNAG	4 cut(s)	682, 1426, 1432, 1830
HpySE526I	ACGT	3 cut(s)	147, 981, 1498
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	7 cut(s)	170, 396, 492, 859, 1214, 1597, 1632
Kpn2I	TCCGGA	3 cut(s)	123, 1292, 1790
Ksp22I	TGATCA	1 cut(s)	883
KspAI	GTTAAC	1 cut(s)	511
KspI	CCGCGG	1 cut(s)	55
Kzo9I	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
LmnI	GCTCC	4 cut(s)	126, 556, 845, 1199
Lsp1109I	GCAGC	2 cut(s)	1189, 1367
LweI	GCATC	2 cut(s)	588, 1525
MaeI	CTAG	2 cut(s)	1134, 1277
MaeII	ACGT	3 cut(s)	147, 981, 1498
MaeIII	GTNAC	7 cut(s)	178, 692, 982, 1086, 1413, 1499, 1632
MalI	GATC	8 cut(s)	65, 215, 315, 385, 885, 1334, 1367, 1563
MbiI	CCGCTC	1 cut(s)	111
MboI	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
MboII	GAAGA	9 cut(s)	109, 289, 509, 537, 698, 803, 863, 1027, 1808
MlsI	TGGCCA	1 cut(s)	429
MluCI	AATT	6 cut(s)	342, 480, 605, 674, 813, 1173
MluNI	TGGCCA	1 cut(s)	429
MlyI	GAGTC	3 cut(s)	300, 392, 733
MmeI	TCCRAC	3 cut(s)	108, 588, 649
Mox20I	TGGCCA	1 cut(s)	429
MroI	TCCGGA	3 cut(s)	123, 1292, 1790
MroXI	GAANNNNTTC	1 cut(s)	284
MscI	TGGCCA	1 cut(s)	429
MseI	TTAA	6 cut(s)	510, 534, 816, 975, 1181, 1514
MslI	CAYNNNNRTG	5 cut(s)	171, 860, 896, 1479, 1740
Msp20I	TGGCCA	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	54, 224
MspI	CCGG	5 cut(s)	69, 124, 354, 1293, 1791
MspR9I	CCNGG	1 cut(s)	1466
Mva1269I	GAATGC	1 cut(s)	559
MvaI	CCWGG	1 cut(s)	1466
MvnI	CGCG	4 cut(s)	54, 246, 1545, 1566
MwoI	GCNNNNNNNGC	5 cut(s)	108, 168, 955, 1355, 1730
NdeII	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
NlaIII	CATG	7 cut(s)	170, 396, 492, 859, 1214, 1597, 1632
NlaIV	GGNNCC	2 cut(s)	128, 1663
NmuCI	GTSAC	3 cut(s)	692, 982, 1632
NruI	TCGCGA	1 cut(s)	1566
NspI	RCATGY	4 cut(s)	492, 859, 1214, 1597
NspV	TTCGAA	1 cut(s)	340
OliI	CACNNNNGTG	1 cut(s)	1479
PaeR7I	CTCGAG	1 cut(s)	14
PciI	ACATGT	2 cut(s)	1210, 1593
PctI	GAATGC	1 cut(s)	559
PdmI	GAANNNNTTC	1 cut(s)	284
PfeI	GAWTC	6 cut(s)	74, 836, 1021, 1130, 1256, 1289
PflFI	GACNNNGTC	1 cut(s)	823
PflMI	CCANNNNNTGG	1 cut(s)	777
PfoI	TCCNGGA	1 cut(s)	1464
PkrI	GCNGC	6 cut(s)	53, 56, 110, 1123, 1204, 1357
PleI	GAGTC	3 cut(s)	299, 392, 732
PpsI	GAGTC	3 cut(s)	299, 392, 732
PscI	ACATGT	2 cut(s)	1210, 1593
Psp6I	CCWGG	1 cut(s)	1464
PspEI	GGTNACC	1 cut(s)	1632
PspGI	CCWGG	1 cut(s)	1464
PspN4I	GGNNCC	2 cut(s)	128, 1663
PspPI	GGNCC	2 cut(s)	524, 1662
PstI	CTGCAG	2 cut(s)	934, 1207
PstNI	CAGNNNCTG	2 cut(s)	1234, 1361
PsyI	GACNNNGTC	1 cut(s)	823
RruI	TCGCGA	1 cut(s)	1566
RsaI	GTAC	4 cut(s)	238, 601, 913, 1076
RsaNI	GTAC	4 cut(s)	237, 600, 912, 1075
RseI	CAYNNNNRTG	5 cut(s)	171, 860, 896, 1479, 1740
SacII	CCGCGG	1 cut(s)	55
SaqAI	TTAA	6 cut(s)	510, 534, 816, 975, 1181, 1514
SatI	GCNGC	6 cut(s)	52, 55, 109, 1122, 1203, 1356
Sau3AI	GATC	8 cut(s)	63, 213, 313, 383, 883, 1332, 1365, 1561
Sau96I	GGNCC	2 cut(s)	524, 1662
SchI	GAGTC	3 cut(s)	300, 392, 733
ScrFI	CCNGG	1 cut(s)	1466
SfaNI	GCATC	2 cut(s)	588, 1525
SfcI	CTRYAG	3 cut(s)	930, 1203, 1551
Sfr274I	CTCGAG	1 cut(s)	14
Sfr303I	CCGCGG	1 cut(s)	55
SfuI	TTCGAA	1 cut(s)	340
SgrBI	CCGCGG	1 cut(s)	55
SinI	GGWCC	2 cut(s)	524, 1662
SlaI	CTCGAG	1 cut(s)	14
SmiMI	CAYNNNNRTG	5 cut(s)	171, 860, 896, 1479, 1740
SmlI	CTYRAG	1 cut(s)	14
SmoI	CTYRAG	1 cut(s)	14
SpeI	ACTAGT	1 cut(s)	1276
Sse9I	AATT	6 cut(s)	342, 480, 605, 674, 813, 1173
SspMI	CTAG	2 cut(s)	1134, 1277
StyD4I	CCNGG	1 cut(s)	1464
TaaI	ACNGT	8 cut(s)	184, 241, 616, 751, 898, 1079, 1492, 1780
TaiI	ACGT	3 cut(s)	150, 984, 1501
TaqI	TCGA	8 cut(s)	15, 309, 330, 340, 382, 1215, 1335, 1824
TasI	AATT	6 cut(s)	342, 480, 605, 674, 813, 1173
TauI	GCSGC	4 cut(s)	54, 57, 111, 1124
TfiI	GAWTC	6 cut(s)	74, 836, 1021, 1130, 1256, 1289
Tru1I	TTAA	6 cut(s)	510, 534, 816, 975, 1181, 1514
Tru9I	TTAA	6 cut(s)	510, 534, 816, 975, 1181, 1514
TscAI	CASTG	1 cut(s)	1497
TseFI	GTSAC	3 cut(s)	692, 982, 1632
TseI	GCWGC	2 cut(s)	1202, 1355
Tsp45I	GTSAC	3 cut(s)	692, 982, 1632
TspDTI	ATGAA	6 cut(s)	109, 598, 1109, 1132, 1704, 1753
TspGWI	ACGGA	2 cut(s)	1206, 1795
TspRI	CASTG	1 cut(s)	1497
Tth111I	GACNNNGTC	1 cut(s)	823
Van91I	CCANNNNNTGG	1 cut(s)	777
VpaK11BI	GGWCC	2 cut(s)	524, 1662
XagI	CCTNNNNNAGG	1 cut(s)	1451
XapI	RAATTY	2 cut(s)	605, 1173
XceI	RCATGY	4 cut(s)	492, 859, 1214, 1597
XhoI	CTCGAG	1 cut(s)	14
XmnI	GAANNNNTTC	1 cut(s)	284
XspI	CTAG	2 cut(s)	1134, 1277
ZraI	GACGTC	1 cut(s)	148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.