Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01360 AT2G01390 |
| fragaria_vesca | FvH4_7g21510 |
| malus_domestica | MD00G1058400.v1.1 MD02G1154900.v1.1 MD15G1269300.v1.1 |
| prunus_persica | Prupe.7G148400_v2.0.a1 Prupe.7G148400_v2.0.a1 |
| pyrus_communis | pycom02g12250 pycom02g12260 pycom15g23370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 277 |
| AclWI | GGATC | 1 cut(s) | 211 |
| AcsI | RAATTY | 1 cut(s) | 78 |
| AfaI | GTAC | 1 cut(s) | 200 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 401 |
| AflIII | ACRYGT | 1 cut(s) | 503 |
| AgsI | TTSAA | 1 cut(s) | 530 |
| AluBI | AGCT | 5 cut(s) | 66, 113, 139, 249, 254 |
| AluI | AGCT | 5 cut(s) | 66, 113, 139, 249, 254 |
| Alw21I | GWGCWC | 1 cut(s) | 141 |
| AlwI | GGATC | 1 cut(s) | 211 |
| Ama87I | CYCGRG | 1 cut(s) | 227 |
| Aor13HI | TCCGGA | 1 cut(s) | 277 |
| ApeKI | GCWGC | 1 cut(s) | 254 |
| ApoI | RAATTY | 1 cut(s) | 78 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 519 |
| AspLEI | GCGC | 1 cut(s) | 313 |
| AsuC2I | CCSGG | 1 cut(s) | 512 |
| AsuHPI | GGTGA | 1 cut(s) | 184 |
| AvaI | CYCGRG | 1 cut(s) | 227 |
| BanII | GRGCYC | 1 cut(s) | 141 |
| BbsI | GAAGAC | 2 cut(s) | 247, 537 |
| Bbv12I | GWGCWC | 1 cut(s) | 141 |
| BbvI | GCAGC | 1 cut(s) | 241 |
| BccI | CCATC | 2 cut(s) | 163, 310 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcnI | CCSGG | 1 cut(s) | 512 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BfmI | CTRYAG | 1 cut(s) | 255 |
| BisI | GCNGC | 1 cut(s) | 255 |
| BlpI | GCTNAGC | 1 cut(s) | 250 |
| BlsI | GCNGC | 1 cut(s) | 256 |
| Bme1390I | CCNGG | 1 cut(s) | 512 |
| BmeT110I | CYCGRG | 1 cut(s) | 227 |
| BmrFI | CCNGG | 1 cut(s) | 512 |
| BpiI | GAAGAC | 2 cut(s) | 247, 537 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 250 |
| BpuEI | CTTGAG | 2 cut(s) | 107, 452 |
| BpuMI | CCSGG | 1 cut(s) | 512 |
| BsaJI | CCNNGG | 1 cut(s) | 202 |
| BsaWI | WCCGGW | 1 cut(s) | 277 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 401 |
| Bse1I | ACTGG | 1 cut(s) | 441 |
| Bse3DI | GCAATG | 2 cut(s) | 216, 360 |
| BseAI | TCCGGA | 1 cut(s) | 277 |
| BseDI | CCNNGG | 1 cut(s) | 202 |
| BseGI | GGATG | 2 cut(s) | 286, 325 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 401 |
| BseMI | GCAATG | 2 cut(s) | 216, 360 |
| BseMII | CTCAG | 2 cut(s) | 116, 345 |
| BseNI | ACTGG | 1 cut(s) | 441 |
| BseXI | GCAGC | 1 cut(s) | 241 |
| BsiHKAI | GWGCWC | 1 cut(s) | 141 |
| BsiHKCI | CYCGRG | 1 cut(s) | 227 |
| BsiSI | CCGG | 2 cut(s) | 278, 511 |
| BslFI | GGGAC | 1 cut(s) | 418 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 401 |
| BsmFI | GGGAC | 1 cut(s) | 418 |
| BsoBI | CYCGRG | 1 cut(s) | 227 |
| Bsp1286I | GDGCHC | 1 cut(s) | 141 |
| Bsp13I | TCCGGA | 1 cut(s) | 277 |
| Bsp143I | GATC | 3 cut(s) | 128, 216, 283 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 250 |
| Bsp19I | CCATGG | 1 cut(s) | 202 |
| BspCNI | CTCAG | 2 cut(s) | 117, 344 |
| BspEI | TCCGGA | 1 cut(s) | 277 |
| BspMAI | CTGCAG | 1 cut(s) | 259 |
| BspPI | GGATC | 1 cut(s) | 211 |
| BsrDI | GCAATG | 2 cut(s) | 216, 360 |
| BsrI | ACTGG | 1 cut(s) | 441 |
| BssECI | CCNNGG | 1 cut(s) | 202 |
| BssMI | GATC | 3 cut(s) | 128, 216, 283 |
| BssT1I | CCWWGG | 1 cut(s) | 202 |
| Bst4CI | ACNGT | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 1 cut(s) | 479 |
| BstDEI | CTNAG | 3 cut(s) | 125, 250, 331 |
| BstDSI | CCRYGG | 1 cut(s) | 202 |
| BstF5I | GGATG | 2 cut(s) | 286, 325 |
| BstHHI | GCGC | 1 cut(s) | 313 |
| BstKTI | GATC | 3 cut(s) | 131, 219, 286 |
| BstMBI | GATC | 3 cut(s) | 128, 216, 283 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 50, 104, 260, 308 |
| BstNSI | RCATGY | 2 cut(s) | 226, 547 |
| BstSCI | CCNGG | 1 cut(s) | 510 |
| BstSFI | CTRYAG | 1 cut(s) | 255 |
| BstV1I | GCAGC | 1 cut(s) | 241 |
| BstV2I | GAAGAC | 2 cut(s) | 247, 537 |
| BtgI | CCRYGG | 1 cut(s) | 202 |
| BtsCI | GGATG | 2 cut(s) | 286, 325 |
| BtsI | GCAGTG | 1 cut(s) | 306 |
| BtsIMutI | CAGTG | 2 cut(s) | 306, 448 |
| CfoI | GCGC | 1 cut(s) | 313 |
| Csp6I | GTAC | 1 cut(s) | 199 |
| CviAII | CATG | 4 cut(s) | 203, 223, 524, 544 |
| CviJI | RGCY | 8 cut(s) | 44, 53, 66, 113, 139, 249, 254, 263 |
| CviKI_1 | RGCY | 8 cut(s) | 44, 53, 66, 113, 139, 249, 254, 263 |
| CviQI | GTAC | 1 cut(s) | 199 |
| DdeI | CTNAG | 3 cut(s) | 125, 250, 331 |
| DpnI | GATC | 3 cut(s) | 130, 218, 285 |
| DpnII | GATC | 3 cut(s) | 128, 216, 283 |
| Eam1104I | CTCTTC | 1 cut(s) | 479 |
| EarI | CTCTTC | 1 cut(s) | 479 |
| Ecl136II | GAGCTC | 1 cut(s) | 139 |
| Eco130I | CCWWGG | 1 cut(s) | 202 |
| Eco24I | GRGCYC | 1 cut(s) | 141 |
| Eco53kI | GAGCTC | 1 cut(s) | 139 |
| Eco88I | CYCGRG | 1 cut(s) | 227 |
| EcoICRI | GAGCTC | 1 cut(s) | 139 |
| EcoRI | GAATTC | 1 cut(s) | 78 |
| EcoT14I | CCWWGG | 1 cut(s) | 202 |
| EcoT22I | ATGCAT | 1 cut(s) | 545 |
| EcoT38I | GRGCYC | 1 cut(s) | 141 |
| ErhI | CCWWGG | 1 cut(s) | 202 |
| FaeI | CATG | 4 cut(s) | 206, 226, 527, 547 |
| FaiI | YATR | 7 cut(s) | 204, 224, 327, 409, 525, 541, 545 |
| FaqI | GGGAC | 1 cut(s) | 418 |
| FatI | CATG | 4 cut(s) | 202, 222, 523, 543 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 255 |
| FokI | GGATG | 2 cut(s) | 293, 332 |
| FriOI | GRGCYC | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 1 cut(s) | 255 |
| FspBI | CTAG | 1 cut(s) | 246 |
| GlaI | GCGC | 1 cut(s) | 312 |
| GluI | GCNGC | 1 cut(s) | 255 |
| HapII | CCGG | 2 cut(s) | 278, 511 |
| HhaI | GCGC | 1 cut(s) | 313 |
| Hin1II | CATG | 4 cut(s) | 206, 226, 527, 547 |
| Hin6I | GCGC | 1 cut(s) | 311 |
| HinP1I | GCGC | 1 cut(s) | 311 |
| HinfI | GANTC | 2 cut(s) | 340, 487 |
| HpaII | CCGG | 2 cut(s) | 278, 511 |
| HphI | GGTGA | 1 cut(s) | 184 |
| Hpy166II | GTNNAC | 1 cut(s) | 199 |
| Hpy188I | TCNGA | 1 cut(s) | 126 |
| Hpy188III | TCNNGA | 6 cut(s) | 56, 86, 278, 344, 431, 451 |
| Hpy8I | GTNNAC | 1 cut(s) | 199 |
| HpyAV | CCTTC | 2 cut(s) | 405, 469 |
| HpyCH4III | ACNGT | 1 cut(s) | 23 |
| HpyCH4IV | ACGT | 1 cut(s) | 505 |
| HpyCH4V | TGCA | 2 cut(s) | 257, 543 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 50, 104, 260, 308 |
| HpyF3I | CTNAG | 3 cut(s) | 125, 250, 331 |
| HpySE526I | ACGT | 1 cut(s) | 505 |
| Hsp92II | CATG | 4 cut(s) | 206, 226, 527, 547 |
| HspAI | GCGC | 1 cut(s) | 311 |
| Kpn2I | TCCGGA | 1 cut(s) | 277 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 3 cut(s) | 128, 216, 283 |
| LmnI | GCTCC | 3 cut(s) | 63, 206, 478 |
| LpnPI | CCDG | 8 cut(s) | 99, 291, 321, 357, 411, 454, 464, 524 |
| Lsp1109I | GCAGC | 1 cut(s) | 241 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MaeII | ACGT | 1 cut(s) | 505 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MalI | GATC | 3 cut(s) | 130, 218, 285 |
| MboI | GATC | 3 cut(s) | 128, 216, 283 |
| MboII | GAAGA | 4 cut(s) | 252, 370, 496, 542 |
| MhlI | GDGCHC | 1 cut(s) | 141 |
| MluCI | AATT | 2 cut(s) | 78, 516 |
| MlyI | GAGTC | 2 cut(s) | 349, 496 |
| MnlI | CCTC | 2 cut(s) | 253, 465 |
| Mph1103I | ATGCAT | 1 cut(s) | 545 |
| MroI | TCCGGA | 1 cut(s) | 277 |
| MroXI | GAANNNNTTC | 1 cut(s) | 519 |
| MspI | CCGG | 2 cut(s) | 278, 511 |
| MspR9I | CCNGG | 1 cut(s) | 512 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 50, 104, 260, 308 |
| NciI | CCSGG | 1 cut(s) | 512 |
| NcoI | CCATGG | 1 cut(s) | 202 |
| NdeII | GATC | 3 cut(s) | 128, 216, 283 |
| NlaIII | CATG | 4 cut(s) | 206, 226, 527, 547 |
| NsiI | ATGCAT | 1 cut(s) | 545 |
| NspI | RCATGY | 2 cut(s) | 226, 547 |
| PdmI | GAANNNNTTC | 1 cut(s) | 519 |
| PfoI | TCCNGGA | 1 cut(s) | 510 |
| PkrI | GCNGC | 1 cut(s) | 256 |
| PleI | GAGTC | 2 cut(s) | 348, 495 |
| PpsI | GAGTC | 2 cut(s) | 348, 495 |
| Psp124BI | GAGCTC | 1 cut(s) | 141 |
| PstI | CTGCAG | 1 cut(s) | 259 |
| RsaI | GTAC | 1 cut(s) | 200 |
| RsaNI | GTAC | 1 cut(s) | 199 |
| SacI | GAGCTC | 1 cut(s) | 141 |
| SatI | GCNGC | 1 cut(s) | 255 |
| Sau3AI | GATC | 3 cut(s) | 128, 216, 283 |
| SchI | GAGTC | 2 cut(s) | 349, 496 |
| ScrFI | CCNGG | 1 cut(s) | 512 |
| SduI | GDGCHC | 1 cut(s) | 141 |
| SetI | ASST | 7 cut(s) | 68, 115, 141, 247, 251, 256, 508 |
| SfcI | CTRYAG | 1 cut(s) | 255 |
| SmlI | CTYRAG | 2 cut(s) | 86, 431 |
| SmoI | CTYRAG | 2 cut(s) | 86, 431 |
| Sse9I | AATT | 2 cut(s) | 78, 516 |
| SspMI | CTAG | 1 cut(s) | 246 |
| SstI | GAGCTC | 1 cut(s) | 141 |
| StyD4I | CCNGG | 1 cut(s) | 510 |
| StyI | CCWWGG | 1 cut(s) | 202 |
| TaaI | ACNGT | 1 cut(s) | 23 |
| TaiI | ACGT | 1 cut(s) | 508 |
| TasI | AATT | 2 cut(s) | 78, 516 |
| TscAI | CASTG | 2 cut(s) | 313, 448 |
| TseI | GCWGC | 1 cut(s) | 254 |
| TspDTI | ATGAA | 3 cut(s) | 71, 371, 512 |
| TspRI | CASTG | 2 cut(s) | 313, 448 |
| XapI | RAATTY | 1 cut(s) | 78 |
| XceI | RCATGY | 2 cut(s) | 226, 547 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 188 |
| XmnI | GAANNNNTTC | 1 cut(s) | 519 |
| XspI | CTAG | 1 cut(s) | 246 |
| Zsp2I | ATGCAT | 1 cut(s) | 545 |