MD15G1269300.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0017929
Physical Location & Seq
Forward (+)
23282897 .. 23285824
2928 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1269300.v1.1.491

Sequence Viewer

Length: 1761 bp
ATGCGCAGTTTCTACAACCTCCATGGATTTCTCAAGCGCCTTGCAGCTTGCACTGCCGTCCACGATCACCAATGTCCAAAATTTTCCACCAAATCCATCCATTTCCTCAAACCCCACAAACCCAACAATCGAATTCCCAGAAAGAACACAAAAAACCATCCCAAATCCACTTCAAAGCAACAACCTTTGGACCCGAAGACTTACATGCGAGAAACAATCACAAACATATACAAAATCCTCAAATATTCGACATGGGATTCCGCTAAAGAACAACTGCAGAACCTTTCCATAAGATGGGACTCTTACACTGTGAGCCAGGTGCTCAAAACCCACCCTCCGATGGAAAAATCGTGGCTTTTTTTCAACTGGGTTGCTGGGTTTAAAGGGTTTAAGCACGACCAGTTCACCTACACGACAATGCTGGACATTTTCGGAGAAGCCAGGAGGGTATCGTCAATGACCCATGTTTTCAAGCAAATGCAGGAAAAGGGGATCAAGATTGATGCCGTTACTTACACTTCTCTGATGCATTGGCTCTCGAATGCCGGAGATGTCGATGGGGCTGTGCAGACTTGGGAGGAGATGAGAGCTCAGGGATGTGCTCCCACTGTTGTTTCTTACACTGCTTATATGAAGATTTTGTTTGGTGATAACAGAGTGAAGGAGGCTACTGACGTATACAGGGAAATGATTCAGTGTGGATGTTCTCCAACTTGTCATACTTACACTATTTTGATGGACTACCTGATTGGGTCTGGCAAATGCAAAGAGGCACTTGACATTTTCGGCAAAATGCAAGACGCTGGAGTACAACCTGATAAAGCGGCTTGCAATATTTTAGTTCAGAAATTGTGCAAAGCGGGAGACACATGGACACTGAACCATATACTTTTGTTTATGAAAGAGAATCGCCTTGCCCTTCGTCACCCTGTATTTCTAGAGGCAGTTGGAACTTTCAAAATTGTTGGCGAGAGTGATTCCCTCCTCAGGCAAGTTCATCCTCACTTTTTCGTTGACTCTGGCAATCAGGAGGCAAGTGAGTTTAGAACACCTGCTGCTGATGCTCTTGTGACAATTGATGAAGCGCTTGTACTGATTCTTTTGAAAAAGGAAAATCTTGTTGCCATAGACCGCTTACTTGCTGGAAATGGAGAAAAGAAAATACGATTGGATTCTGCTATCACCTCAACCATCATTGAGGTAAATTGTGGACATTGCAGACTTGATGGTGCTTTATTGGCTTTCGAATATAGTATGAAAATGGGTATAATCCTTGAGAGGAATGCATATCTTGCTTTGGTAGGAGCTTTGATCAGATCAAAGTCATTTCCAAAAGTCGTGGAGATTGTTGTGGAGATGATTAGGGCTGGATATTCTCTCGGAATATACTTTAGTGCACTTCTGATACATAGGCTTGGGCGTGCTAGAAGGACACCTTGTGCTGCAAAAATCTTTAATTTACTACCTGATGATCACAGGTGCACTGTAACTTACACTGCCTTGATTGGGGCTTACTTCTCTGCTGGGAGTGCTGATAAAGGACTTCAAATTTTTGAAGCAATGCGAGGAGAGGGATTCCGTCCTTTCTTGGGCACATACAATGTGTTGTTAGCAGGTCTCCAAAAATGTGGTAGAGTTCGTGAAGCTGAAATGTATAGGAAGGAAAAGAAGAGTCTGCAGGCTGATGGCGAGTTTCAGGATGCTGTCCCCGTTGAGCAAAAGATTTGTGACTTTCTGTTTGCTGGGGATGTTGTCTCTTGA

Protein Analysis

587

Amino Acids

66.14

Weight (kDa)

9.03

Isoelectric Point (pI)

29.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 129 - 229 9.6e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 133 - 180 3.2e-10 PPR repeat family
PPR_long PF17177 153 - 291 1.5e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 156 - 213 1.5e-13 Pentatricopeptide repeat domain
PPR_1 PF12854 163 - 196 7.3e-06 PPR repeat
PPR_2 PF13041 168 - 212 5.2e-11 PPR repeat family
PPR_2 PF13041 202 - 248 5e-12 PPR repeat family
PPR_2 PF13041 242 - 286 5.5e-09 PPR repeat family
PPR_2 PF13041 494 - 540 1.1e-07 PPR repeat family
PPR_3 PF13812 496 - 537 6.4e-07 Pentatricopeptide repeat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017929)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01360 AT2G01390
fragaria_vesca FvH4_7g21510
malus_domestica MD00G1058400.v1.1 MD02G1154900.v1.1 MD15G1269300.v1.1
prunus_persica Prupe.7G148400_v2.0.a1 Prupe.7G148400_v2.0.a1
pyrus_communis pycom02g12250 pycom02g12260 pycom15g23370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1060
Acc16I TGCGCA 1 cut(s) 5
Acc36I ACCTGC 2 cut(s) 1060, 1604
AccB7I CCANNNNNTGG 1 cut(s) 294
AccI GTMKAC 1 cut(s) 678
AciI CCGC 4 cut(s) 261, 824, 860, 1132
AclWI GGATC 1 cut(s) 500
AcsI RAATTY 3 cut(s) 80, 132, 1548
AdeI CACNNNGTG 1 cut(s) 1439
AfaI GTAC 2 cut(s) 810, 1092
AfeI AGCGCT 1 cut(s) 1086
AfiI CCNNNNNNNGG 5 cut(s) 294, 340, 987, 1506, 1589
AgsI TTSAA 7 cut(s) 174, 364, 472, 958, 1105, 1547, 1556
AjnI CCWGG 2 cut(s) 315, 440
AjuI GAANNNNNNNTTGG 2 cut(s) 1151, 1183
AluBI AGCT 4 cut(s) 47, 590, 1307, 1646
AluI AGCT 4 cut(s) 47, 590, 1307, 1646
Alw21I GWGCWC 5 cut(s) 324, 592, 604, 1399, 1484
Alw26I GTCTC 2 cut(s) 858, 1622
Alw44I GTGCAC 2 cut(s) 1395, 1480
AlwI GGATC 1 cut(s) 500
Aor51HI AGCGCT 1 cut(s) 1086
ApaLI GTGCAC 2 cut(s) 1395, 1480
ApeKI GCWGC 3 cut(s) 44, 1055, 1442
ApoI RAATTY 3 cut(s) 80, 132, 1548
ArsI GACNNNNNNTTYG 2 cut(s) 1721, 1753
Asp700I GAANNNNTTC 1 cut(s) 690
AspLEI GCGC 3 cut(s) 6, 39, 1087
AspS9I GGNCC 1 cut(s) 190
AsuHPI GGTGA 5 cut(s) 59, 397, 659, 917, 1174
AsuII TTCGAA 1 cut(s) 1245
AvaII GGWCC 1 cut(s) 190
AxyI CCTNAGG 1 cut(s) 986
BaeGI GKGCMC 3 cut(s) 1399, 1484, 1595
BanII GRGCYC 1 cut(s) 592
BarI GAAGNNNNNNTAC 2 cut(s) 1074, 1106
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 5 cut(s) 324, 592, 604, 1399, 1484
BbvI GCAGC 3 cut(s) 56, 1042, 1429
BccI CCATC 9 cut(s) 104, 165, 288, 334, 551, 730, 1199, 1220, 1679
BceAI ACGGC 2 cut(s) 41, 491
BciT130I CCWGG 2 cut(s) 317, 442
BclI TGATCA 2 cut(s) 1311, 1471
BcoDI GTCTC 2 cut(s) 858, 1622
BfaI CTAG 2 cut(s) 938, 1425
BfmI CTRYAG 2 cut(s) 275, 1676
BfoI RGCGCY 2 cut(s) 40, 1088
BfuAI ACCTGC 2 cut(s) 1060, 1604
BisI GCNGC 4 cut(s) 45, 825, 1056, 1443
BlsI GCNGC 4 cut(s) 46, 826, 1057, 1444
Bme1390I CCNGG 2 cut(s) 317, 442
Bme18I GGWCC 1 cut(s) 190
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 1 cut(s) 192
BmrFI CCNGG 2 cut(s) 317, 442
BmrI ACTGGG 1 cut(s) 376
BmsI GCATC 4 cut(s) 493, 516, 1051, 1690
BmuI ACTGGG 1 cut(s) 376
BpiI GAAGAC 1 cut(s) 203
BpmI CTGGAG 1 cut(s) 825
Bpu10I CCTNAGC 1 cut(s) 591
Bpu14I TTCGAA 1 cut(s) 1245
BpuEI CTTGAG 2 cut(s) 17, 1295
BsaI GGTCTC 1 cut(s) 1622
BsaJI CCNNGG 1 cut(s) 22
BsaXI ACNNNNNCTCC 2 cut(s) 319, 349
Bsc4I CCNNNNNNNGG 5 cut(s) 294, 340, 987, 1506, 1589
Bse1I ACTGG 2 cut(s) 371, 400
Bse21I CCTNAGG 1 cut(s) 986
Bse3DI GCAATG 2 cut(s) 1213, 1566
BseBI CCWGG 2 cut(s) 317, 442
BseDI CCNNGG 1 cut(s) 22
BseGI GGATG 7 cut(s) 96, 157, 602, 707, 997, 1705, 1753
BseLI CCNNNNNNNGG 5 cut(s) 294, 340, 987, 1506, 1589
BseMI GCAATG 2 cut(s) 1213, 1566
BseMII CTCAG 2 cut(s) 605, 1000
BseNI ACTGG 2 cut(s) 371, 400
BseRI GAGGAG 3 cut(s) 593, 974, 1581
BseSI GKGCMC 3 cut(s) 1399, 1484, 1595
BseXI GCAGC 3 cut(s) 56, 1042, 1429
BseYI CCCAGC 3 cut(s) 374, 1523, 1742
BsgI GTGCAG 1 cut(s) 587
BsiHKAI GWGCWC 5 cut(s) 324, 592, 604, 1399, 1484
BsiSI CCGG 1 cut(s) 546
BslFI GGGAC 2 cut(s) 311, 1691
BslI CCNNNNNNNGG 5 cut(s) 294, 340, 987, 1506, 1589
BsmAI GTCTC 2 cut(s) 858, 1622
BsmFI GGGAC 2 cut(s) 311, 1691
BsmI GAATGC 2 cut(s) 547, 1288
Bso31I GGTCTC 1 cut(s) 1622
Bsp119I TTCGAA 1 cut(s) 1245
Bsp1286I GDGCHC 6 cut(s) 324, 592, 604, 1399, 1484, 1595
Bsp143I GATC 5 cut(s) 64, 492, 1311, 1316, 1471
Bsp19I CCATGG 1 cut(s) 22
BspACI CCGC 4 cut(s) 261, 824, 860, 1132
BspCNI CTCAG 2 cut(s) 604, 999
BspLI GGNNCC 1 cut(s) 192
BspMAI CTGCAG 2 cut(s) 279, 1680
BspMI ACCTGC 2 cut(s) 1060, 1604
BspPI GGATC 1 cut(s) 500
BspT104I TTCGAA 1 cut(s) 1245
BspTNI GGTCTC 1 cut(s) 1622
BsrDI GCAATG 2 cut(s) 1213, 1566
BsrI ACTGG 2 cut(s) 371, 400
BssECI CCNNGG 1 cut(s) 22
BssMI GATC 5 cut(s) 64, 492, 1311, 1316, 1471
BssNAI GTATAC 1 cut(s) 679
BssT1I CCWWGG 1 cut(s) 22
Bst1107I GTATAC 1 cut(s) 679
Bst2UI CCWGG 2 cut(s) 317, 442
Bst4CI ACNGT 3 cut(s) 310, 610, 1486
Bst6I CTCTTC 1 cut(s) 1664
BstAPI GCANNNNNTGC 1 cut(s) 1292
BstBI TTCGAA 1 cut(s) 1245
BstC8I GCNNGC 4 cut(s) 49, 829, 1422, 1680
BstDEI CTNAG 2 cut(s) 591, 986
BstDSI CCRYGG 1 cut(s) 22
BstF5I GGATG 7 cut(s) 96, 157, 602, 707, 997, 1705, 1753
BstH2I RGCGCY 2 cut(s) 40, 1088
BstHHI GCGC 3 cut(s) 6, 39, 1087
BstKTI GATC 5 cut(s) 67, 495, 1314, 1319, 1474
BstMAI GTCTC 2 cut(s) 858, 1622
BstMBI GATC 5 cut(s) 64, 492, 1311, 1316, 1471
BstMWI GCNNNNNNNGC 5 cut(s) 53, 1061, 1238, 1292, 1529
BstNI CCWGG 2 cut(s) 317, 442
BstNSI RCATGY 1 cut(s) 208
BstSCI CCNGG 2 cut(s) 315, 440
BstSFI CTRYAG 2 cut(s) 275, 1676
BstSLI GKGCMC 3 cut(s) 1399, 1484, 1595
BstV1I GCAGC 3 cut(s) 56, 1042, 1429
BstV2I GAAGAC 1 cut(s) 203
BstXI CCANNNNNNTGG 1 cut(s) 1628
BstZ17I GTATAC 1 cut(s) 679
Bsu36I CCTNAGG 1 cut(s) 986
BtgI CCRYGG 1 cut(s) 22
BtsCI GGATG 7 cut(s) 96, 157, 602, 707, 997, 1705, 1753
BtsI GCAGTG 3 cut(s) 51, 621, 1494
BtsIMutI CAGTG 8 cut(s) 51, 306, 606, 621, 701, 875, 1482, 1494
BveI ACCTGC 2 cut(s) 1060, 1604
Cac8I GCNNGC 4 cut(s) 49, 829, 1422, 1680
CfoI GCGC 3 cut(s) 6, 39, 1087
Cfr13I GGNCC 1 cut(s) 190
CseI GACGC 1 cut(s) 809
Csp6I GTAC 2 cut(s) 809, 1091
CspCI CAANNNNNGTGG 2 cut(s) 1320, 1355
CviAII CATG 5 cut(s) 23, 205, 252, 464, 870
CviQI GTAC 2 cut(s) 809, 1091
DdeI CTNAG 2 cut(s) 591, 986
DpnI GATC 5 cut(s) 66, 494, 1313, 1318, 1473
DpnII GATC 5 cut(s) 64, 492, 1311, 1316, 1471
DraI TTTAAA 1 cut(s) 382
DraIII CACNNNGTG 1 cut(s) 1439
Eam1104I CTCTTC 1 cut(s) 1664
EarI CTCTTC 1 cut(s) 1664
Ecl136II GAGCTC 1 cut(s) 590
Eco130I CCWWGG 1 cut(s) 22
Eco24I GRGCYC 1 cut(s) 592
Eco31I GGTCTC 1 cut(s) 1622
Eco47I GGWCC 1 cut(s) 190
Eco47III AGCGCT 1 cut(s) 1086
Eco53kI GAGCTC 1 cut(s) 590
Eco81I CCTNAGG 1 cut(s) 986
EcoICRI GAGCTC 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 132
EcoRII CCWGG 2 cut(s) 315, 440
EcoT14I CCWWGG 1 cut(s) 22
EcoT22I ATGCAT 2 cut(s) 531, 1288
EcoT38I GRGCYC 1 cut(s) 592
ErhI CCWWGG 1 cut(s) 22
FaeI CATG 5 cut(s) 26, 208, 255, 467, 873
FalI AAGNNNNNCTT 4 cut(s) 759, 791, 1420, 1452
FaqI GGGAC 2 cut(s) 311, 1691
FatI CATG 5 cut(s) 22, 204, 251, 463, 869
FauI CCCGC 1 cut(s) 853
FbaI TGATCA 2 cut(s) 1311, 1471
FblI GTMKAC 1 cut(s) 678
Fnu4HI GCNGC 4 cut(s) 45, 825, 1056, 1443
FokI GGATG 6 cut(s) 83, 144, 609, 714, 984, 1712
FriOI GRGCYC 1 cut(s) 592
Fsp4HI GCNGC 4 cut(s) 45, 825, 1056, 1443
FspBI CTAG 2 cut(s) 938, 1425
FspI TGCGCA 1 cut(s) 5
GlaI GCGC 3 cut(s) 5, 38, 1086
GluI GCNGC 4 cut(s) 45, 825, 1056, 1443
GsaI CCCAGC 3 cut(s) 378, 1527, 1746
GsuI CTGGAG 1 cut(s) 825
HaeII RGCGCY 2 cut(s) 40, 1088
HapII CCGG 1 cut(s) 546
HgaI GACGC 1 cut(s) 809
HhaI GCGC 3 cut(s) 6, 39, 1087
Hin1II CATG 5 cut(s) 26, 208, 255, 467, 873
Hin6I GCGC 3 cut(s) 4, 37, 1085
HinP1I GCGC 3 cut(s) 4, 37, 1085
HincII GTYRAC 1 cut(s) 1015
HindII GTYRAC 1 cut(s) 1015
HpaII CCGG 1 cut(s) 546
HphI GGTGA 5 cut(s) 59, 397, 659, 917, 1174
Hpy166II GTNNAC 7 cut(s) 61, 405, 679, 1015, 1211, 1397, 1482
Hpy188I TCNGA 7 cut(s) 339, 434, 525, 846, 1316, 1382, 1404
Hpy188III TCNNGA 7 cut(s) 496, 538, 938, 1028, 1640, 1697, 1758
Hpy8I GTNNAC 7 cut(s) 61, 405, 679, 1015, 1211, 1397, 1482
HpyAV CCTTC 4 cut(s) 655, 929, 1422, 1654
HpyCH4III ACNGT 3 cut(s) 310, 610, 1486
HpyCH4IV ACGT 1 cut(s) 675
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 1061, 1238, 1292, 1529
HpyF3I CTNAG 2 cut(s) 591, 986
HpySE526I ACGT 1 cut(s) 675
Hsp92II CATG 5 cut(s) 26, 208, 255, 467, 873
HspAI GCGC 3 cut(s) 4, 37, 1085
Ksp22I TGATCA 2 cut(s) 1311, 1471
Kzo9I GATC 5 cut(s) 64, 492, 1311, 1316, 1471
LmnI GCTCC 2 cut(s) 607, 1304
Lsp1109I GCAGC 3 cut(s) 56, 1042, 1429
LweI GCATC 4 cut(s) 493, 516, 1051, 1690
MaeI CTAG 2 cut(s) 938, 1425
MaeII ACGT 1 cut(s) 675
MaeIII GTNAC 5 cut(s) 508, 923, 1069, 1486, 1727
MalI GATC 5 cut(s) 66, 494, 1313, 1318, 1473
MboI GATC 5 cut(s) 64, 492, 1311, 1316, 1471
MboII GAAGA 3 cut(s) 208, 646, 1681
MfeI CAATTG 1 cut(s) 1074
MhlI GDGCHC 6 cut(s) 324, 592, 604, 1399, 1484, 1595
MluCI AATT 8 cut(s) 80, 132, 848, 960, 1074, 1204, 1456, 1548
MlyI GAGTC 3 cut(s) 293, 1010, 1681
MmeI TCCRAC 2 cut(s) 734, 928
Mph1103I ATGCAT 2 cut(s) 531, 1288
MroXI GAANNNNTTC 1 cut(s) 690
MseI TTAA 3 cut(s) 381, 390, 1455
MslI CAYNNNNRTG 1 cut(s) 416
MspI CCGG 1 cut(s) 546
MspR9I CCNGG 2 cut(s) 317, 442
MunI CAATTG 1 cut(s) 1074
Mva1269I GAATGC 2 cut(s) 547, 1288
MvaI CCWGG 2 cut(s) 317, 442
MwoI GCNNNNNNNGC 5 cut(s) 53, 1061, 1238, 1292, 1529
NcoI CCATGG 1 cut(s) 22
NdeII GATC 5 cut(s) 64, 492, 1311, 1316, 1471
NlaIII CATG 5 cut(s) 26, 208, 255, 467, 873
NlaIV GGNNCC 1 cut(s) 192
NmuCI GTSAC 3 cut(s) 923, 1069, 1727
NsbI TGCGCA 1 cut(s) 5
NsiI ATGCAT 2 cut(s) 531, 1288
NspI RCATGY 1 cut(s) 208
NspV TTCGAA 1 cut(s) 1245
PaqCI CACCTGC 1 cut(s) 1060
PctI GAATGC 2 cut(s) 547, 1288
PdmI GAANNNNTTC 1 cut(s) 690
PfeI GAWTC 7 cut(s) 257, 691, 907, 977, 1096, 1172, 1575
PflMI CCANNNNNTGG 1 cut(s) 294
PkrI GCNGC 4 cut(s) 46, 826, 1057, 1444
PleI GAGTC 3 cut(s) 293, 1010, 1680
PpsI GAGTC 3 cut(s) 293, 1010, 1680
Psp124BI GAGCTC 1 cut(s) 592
Psp6I CCWGG 2 cut(s) 315, 440
PspFI CCCAGC 3 cut(s) 374, 1523, 1742
PspGI CCWGG 2 cut(s) 315, 440
PspN4I GGNNCC 1 cut(s) 192
PspPI GGNCC 1 cut(s) 190
PstI CTGCAG 2 cut(s) 279, 1680
RsaI GTAC 2 cut(s) 810, 1092
RsaNI GTAC 2 cut(s) 809, 1091
RseI CAYNNNNRTG 1 cut(s) 416
SacI GAGCTC 1 cut(s) 592
SaqAI TTAA 3 cut(s) 381, 390, 1455
SatI GCNGC 4 cut(s) 45, 825, 1056, 1443
Sau3AI GATC 5 cut(s) 64, 492, 1311, 1316, 1471
Sau96I GGNCC 1 cut(s) 190
SchI GAGTC 3 cut(s) 293, 1010, 1681
ScrFI CCNGG 2 cut(s) 317, 442
SduI GDGCHC 6 cut(s) 324, 592, 604, 1399, 1484, 1595
SfaNI GCATC 4 cut(s) 493, 516, 1051, 1690
SfcI CTRYAG 2 cut(s) 275, 1676
SfuI TTCGAA 1 cut(s) 1245
SinI GGWCC 1 cut(s) 190
SmiMI CAYNNNNRTG 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 32, 1274
SmoI CTYRAG 2 cut(s) 32, 1274
Sse9I AATT 8 cut(s) 80, 132, 848, 960, 1074, 1204, 1456, 1548
SsiI CCGC 4 cut(s) 261, 824, 860, 1132
SspI AATATT 2 cut(s) 245, 835
SspMI CTAG 2 cut(s) 938, 1425
SstI GAGCTC 1 cut(s) 592
StyD4I CCNGG 2 cut(s) 315, 440
StyI CCWWGG 1 cut(s) 22
TaaI ACNGT 3 cut(s) 310, 610, 1486
TaiI ACGT 1 cut(s) 678
TaqI TCGA 5 cut(s) 130, 248, 539, 555, 1245
TasI AATT 8 cut(s) 80, 132, 848, 960, 1074, 1204, 1456, 1548
TatI WGTACW 2 cut(s) 808, 1090
TauI GCSGC 1 cut(s) 827
TfiI GAWTC 7 cut(s) 257, 691, 907, 977, 1096, 1172, 1575
Tru1I TTAA 3 cut(s) 381, 390, 1455
Tru9I TTAA 3 cut(s) 381, 390, 1455
TscAI CASTG 8 cut(s) 58, 313, 613, 628, 701, 882, 1489, 1501
TseFI GTSAC 3 cut(s) 923, 1069, 1727
TseI GCWGC 3 cut(s) 44, 1055, 1442
Tsp45I GTSAC 3 cut(s) 923, 1069, 1727
TspDTI ATGAA 5 cut(s) 647, 914, 986, 1095, 1271
TspGWI ACGGA 1 cut(s) 1568
TspRI CASTG 8 cut(s) 58, 313, 613, 628, 701, 882, 1489, 1501
Van91I CCANNNNNTGG 1 cut(s) 294
VneI GTGCAC 2 cut(s) 1395, 1480
VpaK11BI GGWCC 1 cut(s) 190
XapI RAATTY 3 cut(s) 80, 132, 1548
XbaI TCTAGA 1 cut(s) 937
XceI RCATGY 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 678
XmnI GAANNNNTTC 1 cut(s) 690
XspI CTAG 2 cut(s) 938, 1425
Zsp2I ATGCAT 2 cut(s) 531, 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.