Lipopolysaccharide kinase (Kdo/WaaP) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01450 AT2G01450 AT2G01450 AT2G01450 |
| fragaria_vesca | FvH4_4g32501 FvH4_4g32501 FvH4_4g32501 FvH4_4g32501 FvH4_4g32501 |
| malus_domestica | MD13G1024800.v1.1 |
| prunus_persica | Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0441371 |
| rosa_laevigata | RLG00000006097 |
| rosa_multiflora | Rmu_sc0005516.1_g000005 |
| rosa_rugosa | Rorug04G0332800 |
| rosa_samantha | Rh4AG384800 Rh4BG398800 Rh4CG413900 |
| rosa_wichuraiana | Rw4G033220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 555 |
| AccB1I | GGYRCC | 1 cut(s) | 555 |
| AccI | GTMKAC | 1 cut(s) | 1362 |
| AccII | CGCG | 1 cut(s) | 1008 |
| AciI | CCGC | 2 cut(s) | 98, 1119 |
| AclI | AACGTT | 1 cut(s) | 678 |
| AclWI | GGATC | 5 cut(s) | 46, 788, 801, 824, 905 |
| AcsI | RAATTY | 3 cut(s) | 266, 392, 815 |
| AcuI | CTGAAG | 5 cut(s) | 449, 836, 863, 1269, 1275 |
| AcyI | GRCGYC | 1 cut(s) | 1352 |
| AfaI | GTAC | 5 cut(s) | 371, 557, 801, 1031, 1211 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 113, 747 |
| AflII | CTTAAG | 1 cut(s) | 323 |
| AflIII | ACRYGT | 2 cut(s) | 157, 612 |
| AgsI | TTSAA | 5 cut(s) | 155, 271, 923, 1135, 1428 |
| AjiI | CACGTC | 1 cut(s) | 1015 |
| AjnI | CCWGG | 2 cut(s) | 667, 740 |
| AluBI | AGCT | 6 cut(s) | 78, 196, 407, 571, 691, 1289 |
| AluI | AGCT | 6 cut(s) | 78, 196, 407, 571, 691, 1289 |
| Alw21I | GWGCWC | 3 cut(s) | 573, 687, 1241 |
| Alw26I | GTCTC | 3 cut(s) | 166, 502, 1447 |
| Alw44I | GTGCAC | 1 cut(s) | 683 |
| AlwI | GGATC | 5 cut(s) | 46, 788, 801, 824, 905 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1331 |
| ApaLI | GTGCAC | 1 cut(s) | 683 |
| ApeKI | GCWGC | 1 cut(s) | 1370 |
| ApoI | RAATTY | 3 cut(s) | 266, 392, 815 |
| Asp718I | GGTACC | 1 cut(s) | 555 |
| AspLEI | GCGC | 2 cut(s) | 565, 841 |
| AspS9I | GGNCC | 1 cut(s) | 880 |
| AsuHPI | GGTGA | 3 cut(s) | 44, 305, 799 |
| AvaII | GGWCC | 1 cut(s) | 880 |
| BaeGI | GKGCMC | 1 cut(s) | 687 |
| BamHI | GGATCC | 1 cut(s) | 793 |
| BanI | GGYRCC | 1 cut(s) | 555 |
| BanII | GRGCYC | 1 cut(s) | 573 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1408, 1440 |
| BauI | CACGAG | 2 cut(s) | 492, 698 |
| BbsI | GAAGAC | 2 cut(s) | 1254, 1275 |
| Bbv12I | GWGCWC | 3 cut(s) | 573, 687, 1241 |
| BbvCI | CCTCAGC | 1 cut(s) | 348 |
| BbvI | GCAGC | 1 cut(s) | 1382 |
| BccI | CCATC | 4 cut(s) | 137, 292, 546, 958 |
| BciT130I | CCWGG | 2 cut(s) | 669, 742 |
| BciVI | GTATCC | 1 cut(s) | 188 |
| BclI | TGATCA | 1 cut(s) | 1126 |
| BcoDI | GTCTC | 3 cut(s) | 166, 502, 1447 |
| BfaI | CTAG | 3 cut(s) | 692, 762, 1224 |
| BfmI | CTRYAG | 2 cut(s) | 891, 1449 |
| BfoI | RGCGCY | 1 cut(s) | 842 |
| BfrI | CTTAAG | 1 cut(s) | 323 |
| BfuI | GTATCC | 1 cut(s) | 188 |
| BglII | AGATCT | 2 cut(s) | 424, 471 |
| BisI | GCNGC | 1 cut(s) | 1371 |
| BlsI | GCNGC | 1 cut(s) | 1372 |
| Bme1390I | CCNGG | 2 cut(s) | 669, 742 |
| Bme18I | GGWCC | 1 cut(s) | 880 |
| BmgBI | CACGTC | 1 cut(s) | 1015 |
| BmgT120I | GGNCC | 1 cut(s) | 880 |
| BmiI | GGNNCC | 3 cut(s) | 557, 580, 795 |
| BmrFI | CCNGG | 2 cut(s) | 669, 742 |
| BmsI | GCATC | 3 cut(s) | 157, 361, 633 |
| BpiI | GAAGAC | 2 cut(s) | 1254, 1275 |
| Bpu10I | CCTNAGC | 1 cut(s) | 348 |
| BpuEI | CTTGAG | 1 cut(s) | 995 |
| Bsa29I | ATCGAT | 1 cut(s) | 828 |
| BsaHI | GRCGYC | 1 cut(s) | 1352 |
| BsaWI | WCCGGW | 1 cut(s) | 1378 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 29, 108, 138, 1399, 1429 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 113, 747 |
| Bse118I | RCCGGY | 1 cut(s) | 601 |
| Bse1I | ACTGG | 2 cut(s) | 655, 1336 |
| BseBI | CCWGG | 2 cut(s) | 669, 742 |
| BseCI | ATCGAT | 1 cut(s) | 828 |
| BseGI | GGATG | 3 cut(s) | 214, 441, 1051 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 113, 747 |
| BseMII | CTCAG | 5 cut(s) | 177, 196, 214, 362, 417 |
| BseNI | ACTGG | 2 cut(s) | 655, 1336 |
| BseRI | GAGGAG | 4 cut(s) | 336, 1006, 1420, 1435 |
| BseSI | GKGCMC | 1 cut(s) | 687 |
| BseXI | GCAGC | 1 cut(s) | 1382 |
| Bsh1236I | CGCG | 1 cut(s) | 1008 |
| BshNI | GGYRCC | 1 cut(s) | 555 |
| BshVI | ATCGAT | 1 cut(s) | 828 |
| BsiHKAI | GWGCWC | 3 cut(s) | 573, 687, 1241 |
| BsiSI | CCGG | 2 cut(s) | 602, 1379 |
| BslFI | GGGAC | 1 cut(s) | 870 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 113, 747 |
| BsmAI | GTCTC | 3 cut(s) | 166, 502, 1447 |
| BsmFI | GGGAC | 1 cut(s) | 870 |
| Bsp1286I | GDGCHC | 3 cut(s) | 573, 687, 1241 |
| Bsp1407I | TGTACA | 1 cut(s) | 1029 |
| Bsp68I | TCGCGA | 1 cut(s) | 1008 |
| BspACI | CCGC | 2 cut(s) | 98, 1119 |
| BspCNI | CTCAG | 5 cut(s) | 176, 195, 213, 361, 416 |
| BspDI | ATCGAT | 1 cut(s) | 828 |
| BspFNI | CGCG | 1 cut(s) | 1008 |
| BspLI | GGNNCC | 3 cut(s) | 557, 580, 795 |
| BspMAI | CTGCAG | 2 cut(s) | 895, 1453 |
| BspPI | GGATC | 5 cut(s) | 46, 788, 801, 824, 905 |
| BspT107I | GGYRCC | 1 cut(s) | 555 |
| BspTI | CTTAAG | 1 cut(s) | 323 |
| BsrFI | RCCGGY | 1 cut(s) | 601 |
| BsrGI | TGTACA | 1 cut(s) | 1029 |
| BsrI | ACTGG | 2 cut(s) | 655, 1336 |
| BssAI | RCCGGY | 1 cut(s) | 601 |
| BssNI | GRCGYC | 1 cut(s) | 1352 |
| BssSI | CACGAG | 2 cut(s) | 492, 698 |
| Bst2BI | CACGAG | 2 cut(s) | 492, 698 |
| Bst2UI | CCWGG | 2 cut(s) | 669, 742 |
| Bst4CI | ACNGT | 3 cut(s) | 560, 884, 1389 |
| Bst6I | CTCTTC | 3 cut(s) | 891, 1080, 1170 |
| BstACI | GRCGYC | 1 cut(s) | 1352 |
| BstAFI | CTTAAG | 1 cut(s) | 323 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 244 |
| BstAUI | TGTACA | 1 cut(s) | 1029 |
| BstC8I | GCNNGC | 1 cut(s) | 603 |
| BstDEI | CTNAG | 6 cut(s) | 163, 182, 200, 348, 403, 435 |
| BstF5I | GGATG | 3 cut(s) | 214, 441, 1051 |
| BstFNI | CGCG | 1 cut(s) | 1008 |
| BstH2I | RGCGCY | 1 cut(s) | 842 |
| BstHHI | GCGC | 2 cut(s) | 565, 841 |
| BstMAI | GTCTC | 3 cut(s) | 166, 502, 1447 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 75, 202, 244, 899 |
| BstNI | CCWGG | 2 cut(s) | 669, 742 |
| BstNSI | RCATGY | 3 cut(s) | 161, 616, 1398 |
| BstSCI | CCNGG | 2 cut(s) | 667, 740 |
| BstSFI | CTRYAG | 2 cut(s) | 891, 1449 |
| BstSLI | GKGCMC | 1 cut(s) | 687 |
| BstUI | CGCG | 1 cut(s) | 1008 |
| BstV1I | GCAGC | 1 cut(s) | 1382 |
| BstV2I | GAAGAC | 2 cut(s) | 1254, 1275 |
| BstX2I | RGATCY | 4 cut(s) | 51, 424, 471, 793 |
| BstYI | RGATCY | 4 cut(s) | 51, 424, 471, 793 |
| Bsu15I | ATCGAT | 1 cut(s) | 828 |
| BsuI | GTATCC | 1 cut(s) | 188 |
| BsuTUI | ATCGAT | 1 cut(s) | 828 |
| BtgZI | GCGATG | 1 cut(s) | 1023 |
| BtrI | CACGTC | 1 cut(s) | 1015 |
| BtsCI | GGATG | 3 cut(s) | 214, 441, 1051 |
| BtsI | GCAGTG | 1 cut(s) | 1458 |
| BtsIMutI | CAGTG | 2 cut(s) | 1299, 1458 |
| BtuMI | TCGCGA | 1 cut(s) | 1008 |
| Cac8I | GCNNGC | 1 cut(s) | 603 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1331 |
| CfoI | GCGC | 2 cut(s) | 565, 841 |
| Cfr10I | RCCGGY | 1 cut(s) | 601 |
| Cfr13I | GGNCC | 1 cut(s) | 880 |
| ClaI | ATCGAT | 1 cut(s) | 828 |
| CseI | GACGC | 1 cut(s) | 1341 |
| Csp6I | GTAC | 5 cut(s) | 370, 556, 800, 1030, 1210 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1044, 1079 |
| CviAII | CATG | 9 cut(s) | 158, 244, 397, 410, 613, 781, 1027, 1271, 1395 |
| CviQI | GTAC | 5 cut(s) | 370, 556, 800, 1030, 1210 |
| DdeI | CTNAG | 6 cut(s) | 163, 182, 200, 348, 403, 435 |
| Eam1104I | CTCTTC | 3 cut(s) | 891, 1080, 1170 |
| EarI | CTCTTC | 3 cut(s) | 891, 1080, 1170 |
| Ecl136II | GAGCTC | 1 cut(s) | 571 |
| Eco24I | GRGCYC | 1 cut(s) | 573 |
| Eco32I | GATATC | 1 cut(s) | 223 |
| Eco47I | GGWCC | 1 cut(s) | 880 |
| Eco53kI | GAGCTC | 1 cut(s) | 571 |
| Eco57I | CTGAAG | 5 cut(s) | 449, 836, 863, 1269, 1275 |
| EcoICRI | GAGCTC | 1 cut(s) | 571 |
| EcoRI | GAATTC | 1 cut(s) | 266 |
| EcoRII | CCWGG | 2 cut(s) | 667, 740 |
| EcoRV | GATATC | 1 cut(s) | 223 |
| EcoT38I | GRGCYC | 1 cut(s) | 573 |
| FaeI | CATG | 9 cut(s) | 161, 247, 400, 413, 616, 784, 1030, 1274, 1398 |
| FaqI | GGGAC | 1 cut(s) | 870 |
| FatI | CATG | 9 cut(s) | 157, 243, 396, 409, 612, 780, 1026, 1270, 1394 |
| FbaI | TGATCA | 1 cut(s) | 1126 |
| FblI | GTMKAC | 1 cut(s) | 1362 |
| Fnu4HI | GCNGC | 1 cut(s) | 1371 |
| FokI | GGATG | 3 cut(s) | 201, 428, 1038 |
| FriOI | GRGCYC | 1 cut(s) | 573 |
| Fsp4HI | GCNGC | 1 cut(s) | 1371 |
| FspBI | CTAG | 3 cut(s) | 692, 762, 1224 |
| GlaI | GCGC | 2 cut(s) | 564, 840 |
| GluI | GCNGC | 1 cut(s) | 1371 |
| HaeII | RGCGCY | 1 cut(s) | 842 |
| HapII | CCGG | 2 cut(s) | 602, 1379 |
| HgaI | GACGC | 1 cut(s) | 1341 |
| HhaI | GCGC | 2 cut(s) | 565, 841 |
| Hin1I | GRCGYC | 1 cut(s) | 1352 |
| Hin1II | CATG | 9 cut(s) | 161, 247, 400, 413, 616, 784, 1030, 1274, 1398 |
| Hin6I | GCGC | 2 cut(s) | 563, 839 |
| HinP1I | GCGC | 2 cut(s) | 563, 839 |
| HindIII | AAGCTT | 1 cut(s) | 194 |
| HinfI | GANTC | 7 cut(s) | 302, 509, 745, 1003, 1152, 1262, 1315 |
| HpaII | CCGG | 2 cut(s) | 602, 1379 |
| HphI | GGTGA | 3 cut(s) | 44, 305, 799 |
| Hpy166II | GTNNAC | 6 cut(s) | 107, 685, 940, 1212, 1302, 1363 |
| Hpy188I | TCNGA | 9 cut(s) | 51, 166, 185, 307, 429, 750, 1203, 1246, 1261 |
| Hpy188III | TCNNGA | 7 cut(s) | 133, 218, 469, 700, 967, 1007, 1428 |
| Hpy8I | GTNNAC | 6 cut(s) | 107, 685, 940, 1212, 1302, 1363 |
| Hpy99I | CGWCG | 2 cut(s) | 727, 1172 |
| HpyAV | CCTTC | 5 cut(s) | 525, 592, 751, 1247, 1342 |
| HpyCH4III | ACNGT | 3 cut(s) | 560, 884, 1389 |
| HpyCH4IV | ACGT | 4 cut(s) | 318, 540, 678, 1014 |
| HpyCH4V | TGCA | 9 cut(s) | 400, 462, 630, 638, 685, 893, 1066, 1394, 1451 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 75, 202, 244, 899 |
| HpyF3I | CTNAG | 6 cut(s) | 163, 182, 200, 348, 403, 435 |
| HpySE526I | ACGT | 4 cut(s) | 318, 540, 678, 1014 |
| Hsp92I | GRCGYC | 1 cut(s) | 1352 |
| Hsp92II | CATG | 9 cut(s) | 161, 247, 400, 413, 616, 784, 1030, 1274, 1398 |
| HspAI | GCGC | 2 cut(s) | 563, 839 |
| KpnI | GGTACC | 1 cut(s) | 559 |
| KroI | GCCGGC | 1 cut(s) | 601 |
| KroNI | GCCGGC | 1 cut(s) | 603 |
| Ksp22I | TGATCA | 1 cut(s) | 1126 |
| Lsp1109I | GCAGC | 1 cut(s) | 1382 |
| LweI | GCATC | 3 cut(s) | 157, 361, 633 |
| MaeI | CTAG | 3 cut(s) | 692, 762, 1224 |
| MaeII | ACGT | 4 cut(s) | 318, 540, 678, 1014 |
| MaeIII | GTNAC | 3 cut(s) | 700, 846, 1353 |
| MflI | RGATCY | 4 cut(s) | 51, 424, 471, 793 |
| MhlI | GDGCHC | 3 cut(s) | 573, 687, 1241 |
| MluCI | AATT | 5 cut(s) | 266, 359, 392, 815, 998 |
| MlyI | GAGTC | 4 cut(s) | 311, 997, 1146, 1309 |
| MreI | CGCCGGCG | 1 cut(s) | 601 |
| MroNI | GCCGGC | 1 cut(s) | 601 |
| MseI | TTAA | 2 cut(s) | 324, 389 |
| MspCI | CTTAAG | 1 cut(s) | 323 |
| MspI | CCGG | 2 cut(s) | 602, 1379 |
| MspR9I | CCNGG | 2 cut(s) | 669, 742 |
| MvaI | CCWGG | 2 cut(s) | 669, 742 |
| MvnI | CGCG | 1 cut(s) | 1008 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 75, 202, 244, 899 |
| NaeI | GCCGGC | 1 cut(s) | 603 |
| NgoMIV | GCCGGC | 1 cut(s) | 601 |
| NlaIII | CATG | 9 cut(s) | 161, 247, 400, 413, 616, 784, 1030, 1274, 1398 |
| NlaIV | GGNNCC | 3 cut(s) | 557, 580, 795 |
| NmuCI | GTSAC | 2 cut(s) | 700, 1353 |
| NruI | TCGCGA | 1 cut(s) | 1008 |
| NspI | RCATGY | 3 cut(s) | 161, 616, 1398 |
| PciI | ACATGT | 2 cut(s) | 157, 612 |
| PdiI | GCCGGC | 1 cut(s) | 603 |
| PfeI | GAWTC | 3 cut(s) | 509, 745, 1262 |
| PfoI | TCCNGGA | 1 cut(s) | 740 |
| PkrI | GCNGC | 1 cut(s) | 1372 |
| PleI | GAGTC | 4 cut(s) | 310, 997, 1146, 1309 |
| PpsI | GAGTC | 4 cut(s) | 310, 997, 1146, 1309 |
| PscI | ACATGT | 2 cut(s) | 157, 612 |
| Psp124BI | GAGCTC | 1 cut(s) | 573 |
| Psp1406I | AACGTT | 1 cut(s) | 678 |
| Psp6I | CCWGG | 2 cut(s) | 667, 740 |
| PspGI | CCWGG | 2 cut(s) | 667, 740 |
| PspN4I | GGNNCC | 3 cut(s) | 557, 580, 795 |
| PspPI | GGNCC | 1 cut(s) | 880 |
| PstI | CTGCAG | 2 cut(s) | 895, 1453 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1331 |
| PsuI | RGATCY | 4 cut(s) | 51, 424, 471, 793 |
| RruI | TCGCGA | 1 cut(s) | 1008 |
| RsaI | GTAC | 5 cut(s) | 371, 557, 801, 1031, 1211 |
| RsaNI | GTAC | 5 cut(s) | 370, 556, 800, 1030, 1210 |
| SacI | GAGCTC | 1 cut(s) | 573 |
| SaqAI | TTAA | 2 cut(s) | 324, 389 |
| SatI | GCNGC | 1 cut(s) | 1371 |
| Sau96I | GGNCC | 1 cut(s) | 880 |
| SchI | GAGTC | 4 cut(s) | 311, 997, 1146, 1309 |
| ScrFI | CCNGG | 2 cut(s) | 669, 742 |
| SduI | GDGCHC | 3 cut(s) | 573, 687, 1241 |
| SfaNI | GCATC | 3 cut(s) | 157, 361, 633 |
| SfcI | CTRYAG | 2 cut(s) | 891, 1449 |
| SgrAI | CRCCGGYG | 1 cut(s) | 601 |
| SinI | GGWCC | 1 cut(s) | 880 |
| SmlI | CTYRAG | 2 cut(s) | 323, 974 |
| SmoI | CTYRAG | 2 cut(s) | 323, 974 |
| Sse9I | AATT | 5 cut(s) | 266, 359, 392, 815, 998 |
| SsiI | CCGC | 2 cut(s) | 98, 1119 |
| SspMI | CTAG | 3 cut(s) | 692, 762, 1224 |
| SstI | GAGCTC | 1 cut(s) | 573 |
| StyD4I | CCNGG | 2 cut(s) | 667, 740 |
| TaaI | ACNGT | 3 cut(s) | 560, 884, 1389 |
| TaiI | ACGT | 4 cut(s) | 321, 543, 681, 1017 |
| TaqI | TCGA | 5 cut(s) | 211, 828, 953, 968, 1155 |
| TasI | AATT | 5 cut(s) | 266, 359, 392, 815, 998 |
| TatI | WGTACW | 2 cut(s) | 1029, 1209 |
| TfiI | GAWTC | 3 cut(s) | 509, 745, 1262 |
| Tru1I | TTAA | 2 cut(s) | 324, 389 |
| Tru9I | TTAA | 2 cut(s) | 324, 389 |
| TscAI | CASTG | 2 cut(s) | 1299, 1458 |
| TseFI | GTSAC | 2 cut(s) | 700, 1353 |
| TseI | GCWGC | 1 cut(s) | 1370 |
| Tsp45I | GTSAC | 2 cut(s) | 700, 1353 |
| TspDTI | ATGAA | 4 cut(s) | 385, 960, 1188, 1259 |
| TspGWI | ACGGA | 4 cut(s) | 38, 96, 711, 903 |
| TspRI | CASTG | 2 cut(s) | 1299, 1458 |
| Vha464I | CTTAAG | 1 cut(s) | 323 |
| VneI | GTGCAC | 1 cut(s) | 683 |
| VpaK11BI | GGWCC | 1 cut(s) | 880 |
| XapI | RAATTY | 3 cut(s) | 266, 392, 815 |
| XceI | RCATGY | 3 cut(s) | 161, 616, 1398 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 62, 380 |
| XmiI | GTMKAC | 1 cut(s) | 1362 |
| XspI | CTAG | 3 cut(s) | 692, 762, 1224 |