Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007581

Physical Location & Seq

Genomic Coordinates Reverse (-)

31159295 .. 31164362

Gene Structure 5068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g32501.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGCTTGACAACGAGTTTTTCACCGAATACGGTGAGGCTAGTCAATATGAGATACAAGAAGTGATTGGCAAAGGTAGCTATGGTGTTGTTGCATCTGCAGTTGATACTCACACTGGTGAGAAGGTGGCTATTAAGAAAATCAATGATGTCTTTGAGCATGTCTCTGATGCCACTCGCATTTTGAGAGAGATTAAGCTCCTTCGGCTACTGCACCACCCTGATATTGTGGACATAAAGCATATAATGCTACCCCCTTGTAGACGAGAGTTCAAGGATATATATGTTGTATTTGAGTTGATGGAATCTGATCTTCATCAAGTTATAAGGGCAAACGATGATCTCACTCCTGAGCATTATCAGTTTTTCCTGTACCAGCTTCTTCGAGCTCTCAAGTATATACATACAGGAAATGTTTTCCATCGAGATTTAAAGCCAAAGAATATACTTGCTAATGCAGACTGCAAACTGAAAATCTGTGACTTTGGTCTTGCTCGTCCATCATTTAGTGATGCCCCATCAACTGTCTTTTGGACTGATTATGTGGCGACTCGATGGTACCGTGCTCCTGAACTGTGTGGTTCCTTTTTCTCCAAGTACACTCCTGCTATTGATATTTGGAGCATAGGGTGTATATTTGCAGAAATGCTAACAGGAAAACCATTGTTTCCTGGGAAAAATGTTGTACATCAATTGGATCTCATTACTGATTTACTTGGCACTCCTTCTACTGAATCTATTGCAAGGATTCGGAACGAAAAGGCCAGAAGATATTTAAGTAACATGAAGAAAAAGAAACCAACTCCTCTCTCACAAAAAATGCCTAATGCTGATCCATTGGCTCTTCGTTTACTTGAGCGTTTACTTGCATTTGATCCTAGAGATCGTATTTCTGCTGAAGAGGCATTATCAGACCCATATTTTTATGGATTGGCAAACAAGGACAATGAACCATCTAAGCAACCCATTTCAAAGCTCGAGTTTGATTTTGAAAAGAGGAAACTAACAAAAGATGATGTTAGAGAGCTAATTTATAGAGAGATATTAGAGTATCATCCGAAGATGCTACATGACTATCTTGAAGGTTCAGATAATATTGGCTTCATGTATCCAAGTGGTGTTGATCGATTTAGACGACAGTTTGCACATCTTGAGGAACAGTTTGGTAAAGGCGACAGAAGCACTGCACTGCAAAGGAAGCATGCTTCATTACCTAGAGAACGAGTTTGCATGGATGAGGGTACGGAACAAAATGGCAATTCTAAAAAGAGCACCACACTCTCAGCAGGTCGTGCGGCTATACAGAGTCCTCCAAAGTCCCAGAGGTTTGAAGTAACAGACTCTGTTGGTGAAAATGAATCAACTATACAAAATGGCCTTAATAAGCGGCAGTATAGTCCTCATAGCCTGGTGAAGAGTGATAGCATGAGTGCTTCTCAGTGTGTCGTTGTAAAAGGAAAGTACCTCGAGAAGGACAGAATTGCAGCGCAAAAGAAAGAGATGATTAATGTGGTGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

506

Amino Acids

57.87

Weight (kDa)

8.26

Isoelectric Point (pI)

35.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	91 - 382	4.7e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	92 - 302	1.8e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007581)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01450 AT2G01450 AT2G01450 AT2G01450
fragaria_vesca	FvH4_4g32501 FvH4_4g32501 FvH4_4g32501 FvH4_4g32501 FvH4_4g32501
malus_domestica	MD13G1024800.v1.1
prunus_persica	Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1 Prupe.1G325700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0441371
rosa_laevigata	RLG00000006097
rosa_multiflora	Rmu_sc0005516.1_g000005
rosa_rugosa	Rorug04G0332800
rosa_samantha	Rh4AG384800 Rh4BG398800 Rh4CG413900
rosa_wichuraiana	Rw4G033220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	323
Acc36I	ACCTGC	1 cut(s)	1274
Acc65I	GGTACC	1 cut(s)	555
AccB1I	GGYRCC	1 cut(s)	555
AccI	GTMKAC	1 cut(s)	259
AciI	CCGC	2 cut(s)	1292, 1384
AclWI	GGATC	3 cut(s)	702, 824, 866
AcuI	CTGAAG	1 cut(s)	915
AfaI	GTAC	6 cut(s)	371, 557, 596, 684, 1240, 1460
AfiI	CCNNNNNNNGG	1 cut(s)	1468
AgsI	TTSAA	5 cut(s)	271, 969, 989, 1079, 1328
AjnI	CCWGG	2 cut(s)	667, 1404
AleI	CACNNNNGTG	1 cut(s)	114
AluBI	AGCT	6 cut(s)	78, 196, 376, 386, 973, 1024
AluI	AGCT	6 cut(s)	78, 196, 376, 386, 973, 1024
Alw21I	GWGCWC	3 cut(s)	388, 565, 1271
Alw26I	GTCTC	1 cut(s)	166
AlwI	GGATC	3 cut(s)	702, 824, 866
AlwNI	CAGNNNCTG	1 cut(s)	1340
Ama87I	CYCGRG	2 cut(s)	974, 1463
AoxI	GGCC	2 cut(s)	759, 1372
ApeKI	GCWGC	1 cut(s)	1481
AseI	ATTAAT	1 cut(s)	1503
Asp718I	GGTACC	1 cut(s)	555
AspLEI	GCGC	1 cut(s)	1486
AsuHPI	GGTGA	5 cut(s)	13, 44, 128, 1358, 1420
AvaI	CYCGRG	2 cut(s)	974, 1463
BanI	GGYRCC	1 cut(s)	555
BanII	GRGCYC	1 cut(s)	388
Bbv12I	GWGCWC	3 cut(s)	388, 565, 1271
BbvI	GCAGC	1 cut(s)	1493
BccI	CCATC	6 cut(s)	292, 426, 505, 523, 546, 958
BciT130I	CCWGG	2 cut(s)	669, 1406
BciVI	GTATCC	1 cut(s)	1116
BcoDI	GTCTC	1 cut(s)	166
BfaI	CTAG	3 cut(s)	39, 876, 1212
BfmI	CTRYAG	1 cut(s)	96
BfuAI	ACCTGC	1 cut(s)	1274
BfuI	GTATCC	1 cut(s)	1116
BisI	GCNGC	3 cut(s)	1293, 1385, 1482
BlsI	GCNGC	3 cut(s)	1294, 1386, 1483
Bme1390I	CCNGG	2 cut(s)	669, 1406
BmeT110I	CYCGRG	2 cut(s)	974, 1463
BmiI	GGNNCC	2 cut(s)	557, 580
BmrFI	CCNGG	2 cut(s)	669, 1406
BmsI	GCATC	4 cut(s)	101, 157, 499, 1050
BoxI	GACNNNNGTC	1 cut(s)	483
BplI	GAGNNNNNCTC	4 cut(s)	146, 178, 1417, 1449
Bpu10I	CCTNAGC	1 cut(s)	348
BpuEI	CTTGAG	3 cut(s)	374, 872, 1169
Bsa29I	ATCGAT	1 cut(s)	1123
BsaBI	GATNNNNATC	1 cut(s)	312
BsaJI	CCNNGG	1 cut(s)	668
Bsc4I	CCNNNNNNNGG	1 cut(s)	1468
Bse1I	ACTGG	1 cut(s)	118
Bse8I	GATNNNNATC	1 cut(s)	312
BseBI	CCWGG	2 cut(s)	669, 1406
BseCI	ATCGAT	1 cut(s)	1123
BseDI	CCNNGG	1 cut(s)	668
BseGI	GGATG	2 cut(s)	1051, 1237
BseJI	GATNNNNATC	1 cut(s)	312
BseLI	CCNNNNNNNGG	1 cut(s)	1468
BseMII	CTCAG	3 cut(s)	339, 1293, 1448
BseNI	ACTGG	1 cut(s)	118
BseRI	GAGGAG	1 cut(s)	792
BseXI	GCAGC	1 cut(s)	1493
BsgI	GTGCAG	2 cut(s)	194, 1167
BshFI	GGCC	2 cut(s)	761, 1374
BshNI	GGYRCC	1 cut(s)	555
BshVI	ATCGAT	1 cut(s)	1123
BsiHKAI	GWGCWC	3 cut(s)	388, 565, 1271
BsiHKCI	CYCGRG	2 cut(s)	974, 1463
BslFI	GGGAC	1 cut(s)	1300
BslI	CCNNNNNNNGG	1 cut(s)	1468
BsmAI	GTCTC	1 cut(s)	166
BsmFI	GGGAC	1 cut(s)	1300
BsnI	GGCC	2 cut(s)	761, 1374
BsoBI	CYCGRG	2 cut(s)	974, 1463
Bsp1286I	GDGCHC	3 cut(s)	388, 565, 1271
Bsp1407I	TGTACA	1 cut(s)	682
Bsp143I	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
BspACI	CCGC	2 cut(s)	1292, 1384
BspANI	GGCC	2 cut(s)	761, 1374
BspCNI	CTCAG	3 cut(s)	340, 1292, 1447
BspDI	ATCGAT	1 cut(s)	1123
BspLI	GGNNCC	2 cut(s)	557, 580
BspMAI	CTGCAG	1 cut(s)	100
BspMI	ACCTGC	1 cut(s)	1274
BspPI	GGATC	3 cut(s)	702, 824, 866
BspQI	GCTCTTC	1 cut(s)	846
BspT107I	GGYRCC	1 cut(s)	555
BsrGI	TGTACA	1 cut(s)	682
BsrI	ACTGG	1 cut(s)	118
BssECI	CCNNGG	1 cut(s)	668
BssMI	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
Bst2UI	CCWGG	2 cut(s)	669, 1406
Bst4CI	ACNGT	6 cut(s)	32, 523, 560, 573, 1137, 1158
Bst6I	CTCTTC	3 cut(s)	846, 891, 1406
BstAPI	GCANNNNNTGC	2 cut(s)	244, 1289
BstAUI	TGTACA	1 cut(s)	682
BstC8I	GCNNGC	1 cut(s)	1200
BstDEI	CTNAG	4 cut(s)	348, 954, 1279, 1434
BstENI	CCTNNNNNAGG	1 cut(s)	1466
BstF5I	GGATG	2 cut(s)	1051, 1237
BstHHI	GCGC	1 cut(s)	1486
BstKTI	GATC	7 cut(s)	310, 340, 697, 832, 874, 883, 1123
BstMAI	GTCTC	1 cut(s)	166
BstMBI	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 202, 244, 899, 1176, 1195, 1289
BstNI	CCWGG	2 cut(s)	669, 1406
BstNSI	RCATGY	2 cut(s)	161, 1202
BstPAI	GACNNNNGTC	1 cut(s)	483
BstSCI	CCNGG	2 cut(s)	667, 1404
BstSFI	CTRYAG	1 cut(s)	96
BstV1I	GCAGC	1 cut(s)	1493
BstX2I	RGATCY	1 cut(s)	694
BstYI	RGATCY	1 cut(s)	694
Bsu15I	ATCGAT	1 cut(s)	1123
BsuI	GTATCC	1 cut(s)	1116
BsuRI	GGCC	2 cut(s)	761, 1374
BsuTUI	ATCGAT	1 cut(s)	1123
BtsCI	GGATG	2 cut(s)	1051, 1237
BtsI	GCAGTG	2 cut(s)	1179, 1184
BtsIMutI	CAGTG	4 cut(s)	111, 1179, 1184, 1442
BveI	ACCTGC	1 cut(s)	1274
Cac8I	GCNNGC	1 cut(s)	1200
CaiI	CAGNNNCTG	1 cut(s)	1340
CfoI	GCGC	1 cut(s)	1486
ClaI	ATCGAT	1 cut(s)	1123
Csp6I	GTAC	6 cut(s)	370, 556, 595, 683, 1239, 1459
CviAII	CATG	7 cut(s)	158, 781, 1067, 1102, 1199, 1228, 1423
CviQI	GTAC	6 cut(s)	370, 556, 595, 683, 1239, 1459
DdeI	CTNAG	4 cut(s)	348, 954, 1279, 1434
DpnI	GATC	7 cut(s)	309, 339, 696, 831, 873, 882, 1122
DpnII	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
DraI	TTTAAA	1 cut(s)	429
Eam1104I	CTCTTC	3 cut(s)	846, 891, 1406
EarI	CTCTTC	3 cut(s)	846, 891, 1406
Ecl136II	GAGCTC	1 cut(s)	386
Eco24I	GRGCYC	1 cut(s)	388
Eco53kI	GAGCTC	1 cut(s)	386
Eco57I	CTGAAG	1 cut(s)	915
Eco88I	CYCGRG	2 cut(s)	974, 1463
EcoICRI	GAGCTC	1 cut(s)	386
EcoNI	CCTNNNNNAGG	1 cut(s)	1466
EcoRII	CCWGG	2 cut(s)	667, 1404
EcoT38I	GRGCYC	1 cut(s)	388
FaeI	CATG	7 cut(s)	161, 784, 1070, 1105, 1202, 1231, 1426
FaqI	GGGAC	1 cut(s)	1300
FatI	CATG	7 cut(s)	157, 780, 1066, 1101, 1198, 1227, 1422
FblI	GTMKAC	1 cut(s)	259
Fnu4HI	GCNGC	3 cut(s)	1293, 1385, 1482
FokI	GGATG	2 cut(s)	1038, 1244
FriOI	GRGCYC	1 cut(s)	388
Fsp4HI	GCNGC	3 cut(s)	1293, 1385, 1482
FspBI	CTAG	3 cut(s)	39, 876, 1212
GlaI	GCGC	1 cut(s)	1485
GluI	GCNGC	3 cut(s)	1293, 1385, 1482
HaeIII	GGCC	2 cut(s)	761, 1374
HhaI	GCGC	1 cut(s)	1486
Hin1II	CATG	7 cut(s)	161, 784, 1070, 1105, 1202, 1231, 1426
Hin6I	GCGC	1 cut(s)	1484
HinP1I	GCGC	1 cut(s)	1484
HinfI	GANTC	7 cut(s)	302, 547, 731, 745, 1303, 1337, 1355
HphI	GGTGA	5 cut(s)	13, 44, 128, 1358, 1420
Hpy166II	GTNNAC	5 cut(s)	229, 260, 597, 848, 860
Hpy188I	TCNGA	6 cut(s)	166, 307, 750, 910, 1056, 1087
Hpy188III	TCNNGA	6 cut(s)	347, 422, 566, 1076, 1148, 1465
Hpy8I	GTNNAC	5 cut(s)	229, 260, 597, 848, 860
HpyAV	CCTTC	5 cut(s)	115, 209, 732, 1073, 1462
HpyCH4III	ACNGT	6 cut(s)	32, 523, 560, 573, 1137, 1158
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 202, 244, 899, 1176, 1195, 1289
HpyF3I	CTNAG	4 cut(s)	348, 954, 1279, 1434
Hsp92II	CATG	7 cut(s)	161, 784, 1070, 1105, 1202, 1231, 1426
HspAI	GCGC	1 cut(s)	1484
KpnI	GGTACC	1 cut(s)	559
Kzo9I	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
LguI	GCTCTTC	1 cut(s)	846
LmnI	GCTCC	3 cut(s)	201, 568, 618
Lsp1109I	GCAGC	1 cut(s)	1493
LweI	GCATC	4 cut(s)	101, 157, 499, 1050
MaeI	CTAG	3 cut(s)	39, 876, 1212
MaeIII	GTNAC	3 cut(s)	476, 776, 1330
MalI	GATC	7 cut(s)	309, 339, 696, 831, 873, 882, 1122
MboI	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
MboII	GAAGA	8 cut(s)	302, 371, 777, 796, 833, 908, 1069, 1423
MfeI	CAATTG	1 cut(s)	689
MflI	RGATCY	1 cut(s)	694
MhlI	GDGCHC	3 cut(s)	388, 565, 1271
MluCI	AATT	4 cut(s)	689, 1026, 1255, 1476
MlyI	GAGTC	3 cut(s)	541, 1312, 1331
MseI	TTAA	6 cut(s)	132, 192, 428, 773, 1377, 1503
MslI	CAYNNNNRTG	1 cut(s)	114
MspR9I	CCNGG	2 cut(s)	669, 1406
MunI	CAATTG	1 cut(s)	689
MvaI	CCWGG	2 cut(s)	669, 1406
MwoI	GCNNNNNNNGC	7 cut(s)	75, 202, 244, 899, 1176, 1195, 1289
NdeII	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
NlaIII	CATG	7 cut(s)	161, 784, 1070, 1105, 1202, 1231, 1426
NlaIV	GGNNCC	2 cut(s)	557, 580
NmuCI	GTSAC	1 cut(s)	476
NspI	RCATGY	2 cut(s)	161, 1202
OliI	CACNNNNGTG	1 cut(s)	114
PaeI	GCATGC	1 cut(s)	1202
PaeR7I	CTCGAG	2 cut(s)	974, 1463
PciSI	GCTCTTC	1 cut(s)	846
PcsI	WCGNNNNNNNCGW	2 cut(s)	556, 1129
PfeI	GAWTC	4 cut(s)	302, 731, 745, 1355
PkrI	GCNGC	3 cut(s)	1294, 1386, 1483
PleI	GAGTC	3 cut(s)	541, 1311, 1331
PpsI	GAGTC	3 cut(s)	541, 1311, 1331
PshAI	GACNNNNGTC	1 cut(s)	483
PshBI	ATTAAT	1 cut(s)	1503
PsiI	TTATAA	1 cut(s)	323
Psp124BI	GAGCTC	1 cut(s)	388
Psp6I	CCWGG	2 cut(s)	667, 1404
PspGI	CCWGG	2 cut(s)	667, 1404
PspN4I	GGNNCC	2 cut(s)	557, 580
PspXI	VCTCGAGB	1 cut(s)	974
PstI	CTGCAG	1 cut(s)	100
PstNI	CAGNNNCTG	1 cut(s)	1340
PsuI	RGATCY	1 cut(s)	694
RsaI	GTAC	6 cut(s)	371, 557, 596, 684, 1240, 1460
RsaNI	GTAC	6 cut(s)	370, 556, 595, 683, 1239, 1459
RseI	CAYNNNNRTG	1 cut(s)	114
SacI	GAGCTC	1 cut(s)	388
SapI	GCTCTTC	1 cut(s)	846
SaqAI	TTAA	6 cut(s)	132, 192, 428, 773, 1377, 1503
SatI	GCNGC	3 cut(s)	1293, 1385, 1482
Sau3AI	GATC	7 cut(s)	307, 337, 694, 829, 871, 880, 1120
SchI	GAGTC	3 cut(s)	541, 1312, 1331
ScrFI	CCNGG	2 cut(s)	669, 1406
SduI	GDGCHC	3 cut(s)	388, 565, 1271
SfaNI	GCATC	4 cut(s)	101, 157, 499, 1050
SfcI	CTRYAG	1 cut(s)	96
Sfr274I	CTCGAG	2 cut(s)	974, 1463
SlaI	CTCGAG	2 cut(s)	974, 1463
SmiMI	CAYNNNNRTG	1 cut(s)	114
SmlI	CTYRAG	5 cut(s)	389, 851, 974, 1148, 1463
SmoI	CTYRAG	5 cut(s)	389, 851, 974, 1148, 1463
SphI	GCATGC	1 cut(s)	1202
Sse9I	AATT	4 cut(s)	689, 1026, 1255, 1476
SsiI	CCGC	2 cut(s)	1292, 1384
SspI	AATATT	1 cut(s)	1093
SspMI	CTAG	3 cut(s)	39, 876, 1212
SstI	GAGCTC	1 cut(s)	388
StyD4I	CCNGG	2 cut(s)	667, 1404
TaaI	ACNGT	6 cut(s)	32, 523, 560, 573, 1137, 1158
TaqI	TCGA	6 cut(s)	382, 421, 550, 975, 1123, 1464
TasI	AATT	4 cut(s)	689, 1026, 1255, 1476
TatI	WGTACW	2 cut(s)	594, 682
TauI	GCSGC	2 cut(s)	1295, 1387
TfiI	GAWTC	4 cut(s)	302, 731, 745, 1355
Tru1I	TTAA	6 cut(s)	132, 192, 428, 773, 1377, 1503
Tru9I	TTAA	6 cut(s)	132, 192, 428, 773, 1377, 1503
TscAI	CASTG	4 cut(s)	118, 1186, 1191, 1442
TseFI	GTSAC	1 cut(s)	476
TseI	GCWGC	1 cut(s)	1481
Tsp45I	GTSAC	1 cut(s)	476
TspDTI	ATGAA	6 cut(s)	302, 797, 960, 1090, 1194, 1368
TspGWI	ACGGA	1 cut(s)	1256
TspRI	CASTG	4 cut(s)	118, 1186, 1191, 1442
VspI	ATTAAT	1 cut(s)	1503
XagI	CCTNNNNNAGG	1 cut(s)	1466
XceI	RCATGY	2 cut(s)	161, 1202
XhoI	CTCGAG	2 cut(s)	974, 1463
XmiI	GTMKAC	1 cut(s)	259
XspI	CTAG	3 cut(s)	39, 876, 1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.