RchiOBHm_Chr4g0441371

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
63216076 .. 63221296
5221 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40922

Sequence Viewer

Length: 1725 bp
ATGGACGGCCTGATTCGCTGGTTCCAACGCATCGCAACTTCTACTTCTTCATCCTCCCCCGATCCCCATGTACACGACTACCAGTCTCCGTCGGCGGAGGAGCAGGAGTTGACGATCACGGTGGACCTGGACATGAGTGGCCTGAAGCCGATCAAGGTGCCGATAAGAACCAATCACAGACTCGCCTCCATGGACCATCATAAGAATATGCTTGACAACGAGTTTTTCACCGAATACGGTGAGGCAAGTCAATATGAGATACAAGAAGTGATTGGCAAAGGTAGCTATGGTGTTGTTGCGTCTGCAGTTGATACTCACACCGGTGAGAAGGTGGCTATTAAGAAAATCAATGATGTCTTTGAGCATGTCTCTGATGCCACTCGCATTTTAAGAGAAATTAAGCTCCTTCGGCTACTGCACCACCCTGATATTGTGGACATAAAGCATATAATGCTACCCCCTTGTAGACGAGAGTTCAAGGATATATATGTTGTATTTGAGTTGATGGAATCTGACCTTCACCAAGTTATAAAGGCAAATGATGATCTCACTCCTGAGCATTATCAATTTTTCCTGTACCAGCTTCTTCGAGCTCTCAAGTATATACATACAGGAAATGTTTTCCATCGAGATTTAAAGCCAAAAAATATACTTGCTAATGCAGACTGCAAACTGAAAATCTGTGACTTTGGTCTTGCTCGTCCAGCATTTAGCGATGCCCCATCTACTGTCTTTTGGACTGACTATGTGGCAACTCGATGGTACCGTGCTCCCGAACTTTGTGGTTCCTTTTTCTCCAAGTACACTCCTGCTATTGATATTTGGAGCATAGGGTGTATATTTGCAGAAATGCTAACAGGAAAACCATTGTTTCCTGGGAAAAATGTTGTACATCAATTGGATCTCATTACTGATTTACTTGGCACTCCGTCTATCGAATCTATTGCAAGGATTCGGAATGAAAAGGCCAGAAGATATTTAAGTAATATGAAGATAAAGAAACCAACTCCTCTCTCACAAAAAATGCCTCATGCAGATCCATTGGCTCTTCGTTTACTTGAGCGTTTGCTTGCATTTGATCCTAGAGATCGTATTTCTGCTGAAGAGGCACTATCTGACCCATATTTTCATGGATTGGCAAATAAGGATAATGAACCATCCAAGCAGCCCATTTCAAAGCTTGAGTTTGATTTTGAAAAGAGGAAACTAACAAAAGATGATGTAAGAGAGCTAATTTATAGAGAGATTTTAGAGTATCATCCGAAGATGCTGCATGACTACCTTCAAGGTTCAGATAATATTGGCTTCATGTATCCAAGTGGAGTTGATCGATTTAGACGACAATTTGCCCATCTCGAGGAACAGTTTGGTAAAGGTGACAGAAGCACTGCACTGCAGAGGAAGCATGCTTCATTACCTAGAGAACGAGTTTGTATGGATGAGGGCACGGAGCAAAATGGCAATTCTAAAAAGGGTACCACACTCTCAGCGGGTCGTGCAGCTATTCAGAGCCCTCCAAAGTCCCAGAGGTTTGAAGTAACAGAATCTGTCTGTGAAAATGGATCAACCATACAGAATGACCTTAATAAGCCACACTATAGTCCTCATAGTCTGGTGAAGAGTGATAGCATGAGTGCTTCTCAGTGTGTTGTTGTAAATGGAAAGTACCTCGAGAAGGACAGAATCGCAGCACAAAAGAAAGAGATGATTAAAGCGGTGTCATAG

Protein Analysis

574

Amino Acids

65.56

Weight (kDa)

7.35

Isoelectric Point (pI)

38.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 85 - 376 5.2e-66 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 86 - 295 6.4e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 530
Acc65I GGTACC 2 cut(s) 762, 1475
AccB1I GGYRCC 3 cut(s) 157, 762, 1475
AccI GTMKAC 1 cut(s) 466
AciI CCGC 3 cut(s) 95, 1490, 1715
AclWI GGATC 5 cut(s) 56, 909, 1031, 1073, 1570
AcuI CTGAAG 2 cut(s) 164, 1122
AfaI GTAC 7 cut(s) 72, 578, 764, 803, 891, 1477, 1667
AfiI CCNNNNNNNGG 2 cut(s) 1357, 1675
AgeI ACCGGT 1 cut(s) 320
AgsI TTSAA 5 cut(s) 478, 1176, 1196, 1286, 1535
AhdI GACNNNNNGTC 1 cut(s) 82
AjnI CCWGG 2 cut(s) 126, 874
AleI CACNNNNGTG 1 cut(s) 321
AluBI AGCT 7 cut(s) 285, 403, 583, 593, 1180, 1231, 1502
AluI AGCT 7 cut(s) 285, 403, 583, 593, 1180, 1231, 1502
Alw21I GWGCWC 2 cut(s) 595, 772
Alw26I GTCTC 2 cut(s) 90, 373
AlwI GGATC 5 cut(s) 56, 909, 1031, 1073, 1570
AlwNI CAGNNNCTG 1 cut(s) 1547
Ama87I CYCGRG 2 cut(s) 1355, 1670
AoxI GGCC 3 cut(s) 7, 139, 966
ApeKI GCWGC 4 cut(s) 1165, 1270, 1499, 1688
AsiGI ACCGGT 1 cut(s) 320
Asp718I GGTACC 2 cut(s) 762, 1475
AspS9I GGNCC 2 cut(s) 124, 193
AsuHPI GGTGA 6 cut(s) 220, 251, 335, 512, 1388, 1627
AvaI CYCGRG 2 cut(s) 1355, 1670
AvaII GGWCC 2 cut(s) 124, 193
BaeGI GKGCMC 1 cut(s) 1448
BanI GGYRCC 3 cut(s) 157, 762, 1475
BanII GRGCYC 2 cut(s) 595, 1514
Bbv12I GWGCWC 2 cut(s) 595, 772
BbvI GCAGC 4 cut(s) 1177, 1257, 1511, 1700
BccI CCATC 7 cut(s) 204, 499, 633, 730, 753, 1165, 1359
BceAI ACGGC 1 cut(s) 22
BcgI CGANNNNNNTGC 6 cut(s) 139, 173, 926, 960, 1252, 1286
BciT130I CCWGG 2 cut(s) 128, 876
BciVI GTATCC 1 cut(s) 1323
BcoDI GTCTC 2 cut(s) 90, 373
BfaI CTAG 2 cut(s) 1083, 1419
BfmI CTRYAG 3 cut(s) 303, 1394, 1597
BfuI GTATCC 1 cut(s) 1323
BisI GCNGC 4 cut(s) 1166, 1271, 1500, 1689
BlsI GCNGC 4 cut(s) 1167, 1272, 1501, 1690
Bme1390I CCNGG 2 cut(s) 128, 876
Bme18I GGWCC 2 cut(s) 124, 193
BmeRI GACNNNNNGTC 1 cut(s) 82
BmeT110I CYCGRG 2 cut(s) 1355, 1670
BmgT120I GGNCC 2 cut(s) 124, 193
BmiI GGNNCC 5 cut(s) 23, 159, 764, 787, 1477
BmrFI CCNGG 2 cut(s) 128, 876
BmsI GCATC 4 cut(s) 39, 364, 706, 1257
BoxI GACNNNNGTC 1 cut(s) 690
BplI GAGNNNNNCTC 4 cut(s) 353, 385, 1624, 1656
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 3 cut(s) 581, 1079, 1202
Bsa29I ATCGAT 1 cut(s) 1330
BsaJI CCNNGG 2 cut(s) 189, 875
BsaWI WCCGGW 1 cut(s) 320
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 2 cut(s) 1357, 1675
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 1 cut(s) 82
BseBI CCWGG 2 cut(s) 128, 876
BseCI ATCGAT 1 cut(s) 1330
BseDI CCNNGG 2 cut(s) 189, 875
BseGI GGATG 4 cut(s) 50, 1157, 1258, 1444
BseLI CCNNNNNNNGG 2 cut(s) 1357, 1675
BseMII CTCAG 3 cut(s) 546, 1500, 1655
BseNI ACTGG 1 cut(s) 82
BseRI GAGGAG 2 cut(s) 113, 999
BseSI GKGCMC 1 cut(s) 1448
BseXI GCAGC 4 cut(s) 1177, 1257, 1511, 1700
BsgI GTGCAG 3 cut(s) 401, 1374, 1518
BshFI GGCC 3 cut(s) 9, 141, 968
BshNI GGYRCC 3 cut(s) 157, 762, 1475
BshTI ACCGGT 1 cut(s) 320
BshVI ATCGAT 1 cut(s) 1330
BsiHKAI GWGCWC 2 cut(s) 595, 772
BsiHKCI CYCGRG 2 cut(s) 1355, 1670
BsiSI CCGG 1 cut(s) 321
BslFI GGGAC 1 cut(s) 1507
BslI CCNNNNNNNGG 2 cut(s) 1357, 1675
BsmAI GTCTC 2 cut(s) 90, 373
BsmFI GGGAC 1 cut(s) 1507
BsnI GGCC 3 cut(s) 9, 141, 968
BsoBI CYCGRG 2 cut(s) 1355, 1670
Bsp1286I GDGCHC 4 cut(s) 595, 772, 1448, 1514
Bsp1407I TGTACA 2 cut(s) 70, 889
Bsp19I CCATGG 1 cut(s) 189
BspACI CCGC 3 cut(s) 95, 1490, 1715
BspANI GGCC 3 cut(s) 9, 141, 968
BspCNI CTCAG 3 cut(s) 547, 1499, 1654
BspDI ATCGAT 1 cut(s) 1330
BspLI GGNNCC 5 cut(s) 23, 159, 764, 787, 1477
BspMAI CTGCAG 2 cut(s) 307, 1398
BspPI GGATC 5 cut(s) 56, 909, 1031, 1073, 1570
BspQI GCTCTTC 1 cut(s) 1053
BspT107I GGYRCC 3 cut(s) 157, 762, 1475
BsrFI RCCGGY 1 cut(s) 320
BsrGI TGTACA 2 cut(s) 70, 889
BsrI ACTGG 1 cut(s) 82
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 2 cut(s) 189, 875
BssT1I CCWWGG 1 cut(s) 189
Bst2UI CCWGG 2 cut(s) 128, 876
Bst4CI ACNGT 5 cut(s) 121, 239, 730, 767, 1365
Bst6I CTCTTC 3 cut(s) 1053, 1098, 1613
BstAPI GCANNNNNTGC 1 cut(s) 451
BstAUI TGTACA 2 cut(s) 70, 889
BstC8I GCNNGC 2 cut(s) 1071, 1407
BstDEI CTNAG 3 cut(s) 555, 1486, 1641
BstDSI CCRYGG 1 cut(s) 189
BstENI CCTNNNNNAGG 1 cut(s) 1673
BstF5I GGATG 4 cut(s) 50, 1157, 1258, 1444
BstMAI GTCTC 2 cut(s) 90, 373
BstMWI GCNNNNNNNGC 8 cut(s) 15, 282, 409, 451, 704, 1106, 1402, 1496
BstNI CCWGG 2 cut(s) 128, 876
BstNSI RCATGY 2 cut(s) 368, 1409
BstPAI GACNNNNGTC 1 cut(s) 690
BstSCI CCNGG 2 cut(s) 126, 874
BstSFI CTRYAG 3 cut(s) 303, 1394, 1597
BstSLI GKGCMC 1 cut(s) 1448
BstV1I GCAGC 4 cut(s) 1177, 1257, 1511, 1700
BstX2I RGATCY 2 cut(s) 901, 1036
BstYI RGATCY 2 cut(s) 901, 1036
Bsu15I ATCGAT 1 cut(s) 1330
BsuI GTATCC 1 cut(s) 1323
BsuRI GGCC 3 cut(s) 9, 141, 968
BsuTUI ATCGAT 1 cut(s) 1330
BtgI CCRYGG 1 cut(s) 189
BtgZI GCGATG 2 cut(s) 16, 729
BtsCI GGATG 4 cut(s) 50, 1157, 1258, 1444
BtsI GCAGTG 2 cut(s) 1386, 1391
BtsIMutI CAGTG 3 cut(s) 1386, 1391, 1649
Cac8I GCNNGC 2 cut(s) 1071, 1407
CaiI CAGNNNCTG 1 cut(s) 1547
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 2 cut(s) 124, 193
ClaI ATCGAT 1 cut(s) 1330
CseI GACGC 1 cut(s) 288
Csp6I GTAC 7 cut(s) 71, 577, 763, 802, 890, 1476, 1666
CspAI ACCGGT 1 cut(s) 320
CviQI GTAC 7 cut(s) 71, 577, 763, 802, 890, 1476, 1666
DdeI CTNAG 3 cut(s) 555, 1486, 1641
DraI TTTAAA 1 cut(s) 636
DriI GACNNNNNGTC 1 cut(s) 82
Eam1104I CTCTTC 3 cut(s) 1053, 1098, 1613
Eam1105I GACNNNNNGTC 1 cut(s) 82
EarI CTCTTC 3 cut(s) 1053, 1098, 1613
EciI GGCGGA 1 cut(s) 110
Ecl136II GAGCTC 1 cut(s) 593
Eco130I CCWWGG 1 cut(s) 189
Eco24I GRGCYC 2 cut(s) 595, 1514
Eco47I GGWCC 2 cut(s) 124, 193
Eco53kI GAGCTC 1 cut(s) 593
Eco57I CTGAAG 2 cut(s) 164, 1122
Eco88I CYCGRG 2 cut(s) 1355, 1670
EcoICRI GAGCTC 1 cut(s) 593
EcoNI CCTNNNNNAGG 1 cut(s) 1673
EcoRII CCWGG 2 cut(s) 126, 874
EcoT14I CCWWGG 1 cut(s) 189
EcoT38I GRGCYC 2 cut(s) 595, 1514
ErhI CCWWGG 1 cut(s) 189
FaqI GGGAC 1 cut(s) 1507
FauI CCCGC 1 cut(s) 1483
FblI GTMKAC 1 cut(s) 466
Fnu4HI GCNGC 4 cut(s) 1166, 1271, 1500, 1689
FokI GGATG 4 cut(s) 37, 1144, 1245, 1451
FriOI GRGCYC 2 cut(s) 595, 1514
Fsp4HI GCNGC 4 cut(s) 1166, 1271, 1500, 1689
FspBI CTAG 2 cut(s) 1083, 1419
GluI GCNGC 4 cut(s) 1166, 1271, 1500, 1689
HaeIII GGCC 3 cut(s) 9, 141, 968
HapII CCGG 1 cut(s) 321
HgaI GACGC 1 cut(s) 288
HincII GTYRAC 1 cut(s) 111
HindII GTYRAC 1 cut(s) 111
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 7 cut(s) 13, 180, 509, 938, 952, 1544, 1683
HpaII CCGG 1 cut(s) 321
HphI GGTGA 6 cut(s) 220, 251, 335, 512, 1388, 1627
Hpy166II GTNNAC 7 cut(s) 73, 111, 124, 436, 467, 804, 1055
Hpy188I TCNGA 7 cut(s) 373, 514, 957, 1117, 1263, 1294, 1509
Hpy188III TCNNGA 5 cut(s) 554, 629, 773, 1355, 1672
Hpy8I GTNNAC 7 cut(s) 73, 111, 124, 436, 467, 804, 1055
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 5 cut(s) 322, 416, 527, 1292, 1669
HpyCH4III ACNGT 5 cut(s) 121, 239, 730, 767, 1365
HpyF10VI GCNNNNNNNGC 8 cut(s) 15, 282, 409, 451, 704, 1106, 1402, 1496
HpyF3I CTNAG 3 cut(s) 555, 1486, 1641
KpnI GGTACC 2 cut(s) 766, 1479
LguI GCTCTTC 1 cut(s) 1053
LmnI GCTCC 5 cut(s) 100, 408, 775, 825, 1450
Lsp1109I GCAGC 4 cut(s) 1177, 1257, 1511, 1700
LweI GCATC 4 cut(s) 39, 364, 706, 1257
MaeI CTAG 2 cut(s) 1083, 1419
MaeIII GTNAC 3 cut(s) 683, 1376, 1537
MboII GAAGA 8 cut(s) 39, 578, 984, 1003, 1040, 1115, 1276, 1630
MfeI CAATTG 1 cut(s) 896
MflI RGATCY 2 cut(s) 901, 1036
MhlI GDGCHC 4 cut(s) 595, 772, 1448, 1514
MluCI AATT 6 cut(s) 396, 566, 896, 1233, 1343, 1462
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 1 cut(s) 49
MseI TTAA 7 cut(s) 339, 389, 399, 635, 980, 1584, 1710
MslI CAYNNNNRTG 1 cut(s) 321
MspA1I CMGCKG 1 cut(s) 1490
MspI CCGG 1 cut(s) 321
MspR9I CCNGG 2 cut(s) 128, 876
MunI CAATTG 1 cut(s) 896
MvaI CCWGG 2 cut(s) 128, 876
MwoI GCNNNNNNNGC 8 cut(s) 15, 282, 409, 451, 704, 1106, 1402, 1496
NcoI CCATGG 1 cut(s) 189
NlaIV GGNNCC 5 cut(s) 23, 159, 764, 787, 1477
NmuCI GTSAC 2 cut(s) 683, 1376
NspI RCATGY 2 cut(s) 368, 1409
OliI CACNNNNGTG 1 cut(s) 321
PaeI GCATGC 1 cut(s) 1409
PaeR7I CTCGAG 2 cut(s) 1355, 1670
PciSI GCTCTTC 1 cut(s) 1053
PcsI WCGNNNNNNNCGW 2 cut(s) 763, 1336
PfeI GAWTC 6 cut(s) 13, 509, 938, 952, 1544, 1683
PinAI ACCGGT 1 cut(s) 320
PkrI GCNGC 4 cut(s) 1167, 1272, 1501, 1690
PleI GAGTC 1 cut(s) 174
PpsI GAGTC 1 cut(s) 174
PshAI GACNNNNGTC 1 cut(s) 690
PsiI TTATAA 1 cut(s) 530
Psp124BI GAGCTC 1 cut(s) 595
Psp6I CCWGG 2 cut(s) 126, 874
PspGI CCWGG 2 cut(s) 126, 874
PspN4I GGNNCC 5 cut(s) 23, 159, 764, 787, 1477
PspPI GGNCC 2 cut(s) 124, 193
PstI CTGCAG 2 cut(s) 307, 1398
PstNI CAGNNNCTG 1 cut(s) 1547
PsuI RGATCY 2 cut(s) 901, 1036
RsaI GTAC 7 cut(s) 72, 578, 764, 803, 891, 1477, 1667
RsaNI GTAC 7 cut(s) 71, 577, 763, 802, 890, 1476, 1666
RseI CAYNNNNRTG 1 cut(s) 321
SacI GAGCTC 1 cut(s) 595
SapI GCTCTTC 1 cut(s) 1053
SaqAI TTAA 7 cut(s) 339, 389, 399, 635, 980, 1584, 1710
SatI GCNGC 4 cut(s) 1166, 1271, 1500, 1689
Sau96I GGNCC 2 cut(s) 124, 193
SchI GAGTC 1 cut(s) 174
ScrFI CCNGG 2 cut(s) 128, 876
SduI GDGCHC 4 cut(s) 595, 772, 1448, 1514
SfaNI GCATC 4 cut(s) 39, 364, 706, 1257
SfcI CTRYAG 3 cut(s) 303, 1394, 1597
Sfr274I CTCGAG 2 cut(s) 1355, 1670
SgrAI CRCCGGYG 1 cut(s) 320
SinI GGWCC 2 cut(s) 124, 193
SlaI CTCGAG 2 cut(s) 1355, 1670
SmiMI CAYNNNNRTG 1 cut(s) 321
SmlI CTYRAG 5 cut(s) 596, 1058, 1181, 1355, 1670
SmoI CTYRAG 5 cut(s) 596, 1058, 1181, 1355, 1670
SphI GCATGC 1 cut(s) 1409
Sse9I AATT 6 cut(s) 396, 566, 896, 1233, 1343, 1462
SsiI CCGC 3 cut(s) 95, 1490, 1715
SspI AATATT 1 cut(s) 1300
SspMI CTAG 2 cut(s) 1083, 1419
SstI GAGCTC 1 cut(s) 595
StyD4I CCNGG 2 cut(s) 126, 874
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 5 cut(s) 121, 239, 730, 767, 1365
TaqI TCGA 7 cut(s) 589, 628, 757, 936, 1330, 1356, 1671
TasI AATT 6 cut(s) 396, 566, 896, 1233, 1343, 1462
TatI WGTACW 3 cut(s) 70, 801, 889
TfiI GAWTC 6 cut(s) 13, 509, 938, 952, 1544, 1683
Tru1I TTAA 7 cut(s) 339, 389, 399, 635, 980, 1584, 1710
Tru9I TTAA 7 cut(s) 339, 389, 399, 635, 980, 1584, 1710
TscAI CASTG 3 cut(s) 1393, 1398, 1649
TseFI GTSAC 2 cut(s) 683, 1376
TseI GCWGC 4 cut(s) 1165, 1270, 1499, 1688
Tsp45I GTSAC 2 cut(s) 683, 1376
TspDTI ATGAA 7 cut(s) 39, 975, 1004, 1118, 1167, 1297, 1401
TspGWI ACGGA 3 cut(s) 78, 918, 1463
TspRI CASTG 3 cut(s) 1393, 1398, 1649
VpaK11BI GGWCC 2 cut(s) 124, 193
XagI CCTNNNNNAGG 1 cut(s) 1673
XceI RCATGY 2 cut(s) 368, 1409
XhoI CTCGAG 2 cut(s) 1355, 1670
XmiI GTMKAC 1 cut(s) 466
XspI CTAG 2 cut(s) 1083, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.