Rh4BG398800

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
54950927 .. 54956888
5962 bp
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UTR
Exon/CDS
Intron
Rh4BG398800.1

Sequence Viewer

Length: 1554 bp
ATGCTTGACAACGAGTTTTTCACCGAATACGGTGAGGCAAGTCAATATGAGATACAAGAAGTGATTGGCAAAGGTAGCTATGGTGTTGTTGCGTCTGCAGTTGATACTCACACCGGTGAGAAGGTGGCTATTAAGAAAATCAATGATGTCTTTGAGCATGTCTCTGATGCCACTCGCATATTAAGAGAAATTAAGCTCCTTCGGCTACTGCACCACCCTGATATTGTGGACATAAAGCATATAATGCTACCCCCTTGTAGACGAGAGTTCAAGGATATATATGTTGTATTTGAGTTGATGGAATCTGACCTTCACCAAGTTATAAAGGCAAATGATGATCTCACTCCTGAGCATTATCAATTTTTCCTGTACCAGCTTCTTCGAGCTCTCAAGTATATACATACAGGAAATGTTTTCCATCGAGATTTAAAGCCAAAAAATATACTTGCTAATGCAGACTGCAAACTGAAAATCTGTGACTTTGGTCTTGCTCGTCCAGCATTTAGCGATGCCCCATCTACTGTCTTTTGGACTGACTATGTGGCAACTCGATGGTACCGTGCTCCCGAACTTTGTGGTTCCTTTTTCTCCAAGTACACTCCTGCTATTGATATTTGGAGCATAGGGTGTATATTTGCAGAAATGCTAACAGGAAAACCATTGTTTCCTGGGAAAAATGTTGTACATCAATTGGATCTCATTACTGATTTACTTGGCACTCCGTCTATCGAATCTATTGCAAGGATTCGGAACGAAAAGGCCAGAAGATATTTAAGTAATATGAAGATAAAGAAACCAACTCCTCTCTCACAAAAAATGCCTCATGCAGATCCATTGGCTCTTCGTTTACTTGAGCGTTTGCTTGCATTCGATCCTAGAGATCGTATTTCTGCTGAAGAGGCACTATCTGACCCATATTTTTATGGATTGGCAAATAAGGATAATGAACCATCCAAGCAGCCCATTTCAAAGCTTGAGTTTGATTTTGAAAAGAGGAAACTGACAAAAGATGATGTAAGAGAGCTAATTTATAGAGAGATTTTAGAGTATCATCCGAAGATGCTGCATGACTACCTTCAAGGTTCAGATAATATTGGCTTCATGTATCCAAGTGGAGTTGATCGATTTAGACGACAATTTGCCCATCTTGAGGAACAGTTTGGTAAAGATGACAGAAGCACTGCACTGCAGAGGAAGCATGCTTCATTACCTAGAGAACGAGTTTGTATGGATGAGGGCACGGAGCAAAATGGCAATTCTAAAAAGGGTACCACACTCTCAGCGGGTCGTGCAGCTATTCAGAGCCCTCCAAAGTCCCAGAGGTTTGAAGTAACAGAATCTGTCTGTGAAAATGGATCATCCATACAGAATGACCTTAATAAGCCACACTATAGTCCTCATAGCCTGGTGAAGAGTGATAGCATGAGTGCTTCTCAGTGTGTCGTTGTAAATGGAAAGTACCTTGAGGTAAGTTTTGACGCATCATTAGTTAAGTTAGATGCCTGTTGGTTGTTAACAGTTTTCTTTTGTATGGCAAGTCCATTCTCATCATGA

Protein Analysis

517

Amino Acids

59.09

Weight (kDa)

6.64

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 307 4e-66 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 226 5.1e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 323
Acc65I GGTACC 2 cut(s) 555, 1268
AccB1I GGYRCC 2 cut(s) 555, 1268
AccI GTMKAC 1 cut(s) 259
AciI CCGC 1 cut(s) 1283
AclWI GGATC 4 cut(s) 702, 824, 866, 1363
AcuI CTGAAG 1 cut(s) 915
AfaI GTAC 6 cut(s) 371, 557, 596, 684, 1270, 1460
AfiI CCNNNNNNNGG 1 cut(s) 1150
AgeI ACCGGT 1 cut(s) 113
AgsI TTSAA 5 cut(s) 271, 969, 989, 1079, 1328
AjnI CCWGG 2 cut(s) 667, 1404
AleI CACNNNNGTG 1 cut(s) 114
AluBI AGCT 7 cut(s) 78, 196, 376, 386, 973, 1024, 1295
AluI AGCT 7 cut(s) 78, 196, 376, 386, 973, 1024, 1295
Alw21I GWGCWC 2 cut(s) 388, 565
Alw26I GTCTC 1 cut(s) 166
AlwI GGATC 4 cut(s) 702, 824, 866, 1363
AlwNI CAGNNNCTG 1 cut(s) 1340
AoxI GGCC 1 cut(s) 759
ApeKI GCWGC 3 cut(s) 958, 1063, 1292
AsiGI ACCGGT 1 cut(s) 113
Asp718I GGTACC 2 cut(s) 555, 1268
AsuHPI GGTGA 5 cut(s) 13, 44, 128, 305, 1420
BaeGI GKGCMC 1 cut(s) 1241
BanI GGYRCC 2 cut(s) 555, 1268
BanII GRGCYC 2 cut(s) 388, 1307
Bbv12I GWGCWC 2 cut(s) 388, 565
BbvI GCAGC 3 cut(s) 970, 1050, 1304
BccI CCATC 6 cut(s) 292, 426, 523, 546, 958, 1152
BcgI CGANNNNNNTGC 4 cut(s) 719, 753, 1045, 1079
BciT130I CCWGG 2 cut(s) 669, 1406
BciVI GTATCC 1 cut(s) 1116
BcoDI GTCTC 1 cut(s) 166
BfaI CTAG 2 cut(s) 876, 1212
BfmI CTRYAG 3 cut(s) 96, 1187, 1390
BfuI GTATCC 1 cut(s) 1116
BisI GCNGC 3 cut(s) 959, 1064, 1293
BlsI GCNGC 3 cut(s) 960, 1065, 1294
Bme1390I CCNGG 2 cut(s) 669, 1406
BmiI GGNNCC 3 cut(s) 557, 580, 1270
BmrFI CCNGG 2 cut(s) 669, 1406
BmsI GCATC 5 cut(s) 157, 499, 1050, 1489, 1490
BoxI GACNNNNGTC 1 cut(s) 483
BplI GAGNNNNNCTC 4 cut(s) 146, 178, 1417, 1449
Bpu10I CCTNAGC 1 cut(s) 348
BpuEI CTTGAG 5 cut(s) 374, 872, 995, 1169, 1484
Bsa29I ATCGAT 1 cut(s) 1123
BsaJI CCNNGG 1 cut(s) 668
BsaWI WCCGGW 1 cut(s) 113
Bsc4I CCNNNNNNNGG 1 cut(s) 1150
Bse118I RCCGGY 1 cut(s) 113
BseBI CCWGG 2 cut(s) 669, 1406
BseCI ATCGAT 1 cut(s) 1123
BseDI CCNNGG 1 cut(s) 668
BseGI GGATG 4 cut(s) 950, 1051, 1237, 1358
BseLI CCNNNNNNNGG 1 cut(s) 1150
BseMII CTCAG 3 cut(s) 339, 1293, 1448
BseRI GAGGAG 1 cut(s) 792
BseSI GKGCMC 1 cut(s) 1241
BseXI GCAGC 3 cut(s) 970, 1050, 1304
BsgI GTGCAG 3 cut(s) 194, 1167, 1311
BshFI GGCC 1 cut(s) 761
BshNI GGYRCC 2 cut(s) 555, 1268
BshTI ACCGGT 1 cut(s) 113
BshVI ATCGAT 1 cut(s) 1123
BsiHKAI GWGCWC 2 cut(s) 388, 565
BsiSI CCGG 1 cut(s) 114
BslFI GGGAC 1 cut(s) 1300
BslI CCNNNNNNNGG 1 cut(s) 1150
BsmAI GTCTC 1 cut(s) 166
BsmFI GGGAC 1 cut(s) 1300
BsmI GAATGC 1 cut(s) 866
BsnI GGCC 1 cut(s) 761
Bsp1286I GDGCHC 4 cut(s) 388, 565, 1241, 1307
Bsp1407I TGTACA 1 cut(s) 682
Bsp143I GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
BspACI CCGC 1 cut(s) 1283
BspANI GGCC 1 cut(s) 761
BspCNI CTCAG 3 cut(s) 340, 1292, 1447
BspDI ATCGAT 1 cut(s) 1123
BspHI TCATGA 1 cut(s) 1550
BspLI GGNNCC 3 cut(s) 557, 580, 1270
BspMAI CTGCAG 2 cut(s) 100, 1191
BspPI GGATC 4 cut(s) 702, 824, 866, 1363
BspQI GCTCTTC 1 cut(s) 846
BspT107I GGYRCC 2 cut(s) 555, 1268
BsrFI RCCGGY 1 cut(s) 113
BsrGI TGTACA 1 cut(s) 682
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 1 cut(s) 668
BssMI GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
Bst2UI CCWGG 2 cut(s) 669, 1406
Bst4CI ACNGT 5 cut(s) 32, 523, 560, 1158, 1519
Bst6I CTCTTC 3 cut(s) 846, 891, 1406
BstAPI GCANNNNNTGC 1 cut(s) 244
BstAUI TGTACA 1 cut(s) 682
BstC8I GCNNGC 2 cut(s) 864, 1200
BstDEI CTNAG 3 cut(s) 348, 1279, 1434
BstF5I GGATG 4 cut(s) 950, 1051, 1237, 1358
BstKTI GATC 7 cut(s) 340, 697, 832, 874, 883, 1123, 1358
BstMAI GTCTC 1 cut(s) 166
BstMBI GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
BstMWI GCNNNNNNNGC 7 cut(s) 75, 202, 244, 497, 899, 1195, 1289
BstNI CCWGG 2 cut(s) 669, 1406
BstNSI RCATGY 2 cut(s) 161, 1202
BstPAI GACNNNNGTC 1 cut(s) 483
BstSCI CCNGG 2 cut(s) 667, 1404
BstSFI CTRYAG 3 cut(s) 96, 1187, 1390
BstSLI GKGCMC 1 cut(s) 1241
BstV1I GCAGC 3 cut(s) 970, 1050, 1304
BstX2I RGATCY 2 cut(s) 694, 829
BstYI RGATCY 2 cut(s) 694, 829
Bsu15I ATCGAT 1 cut(s) 1123
BsuI GTATCC 1 cut(s) 1116
BsuRI GGCC 1 cut(s) 761
BsuTUI ATCGAT 1 cut(s) 1123
BtgZI GCGATG 1 cut(s) 522
BtsCI GGATG 4 cut(s) 950, 1051, 1237, 1358
BtsI GCAGTG 2 cut(s) 1179, 1184
BtsIMutI CAGTG 3 cut(s) 1179, 1184, 1442
Cac8I GCNNGC 2 cut(s) 864, 1200
CaiI CAGNNNCTG 1 cut(s) 1340
CciI TCATGA 1 cut(s) 1550
Cfr10I RCCGGY 1 cut(s) 113
ClaI ATCGAT 1 cut(s) 1123
CseI GACGC 2 cut(s) 81, 1487
Csp6I GTAC 6 cut(s) 370, 556, 595, 683, 1269, 1459
CspAI ACCGGT 1 cut(s) 113
CviAII CATG 7 cut(s) 158, 824, 1067, 1102, 1199, 1423, 1551
CviQI GTAC 6 cut(s) 370, 556, 595, 683, 1269, 1459
DdeI CTNAG 3 cut(s) 348, 1279, 1434
DpnI GATC 7 cut(s) 339, 696, 831, 873, 882, 1122, 1357
DpnII GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
DraI TTTAAA 1 cut(s) 429
Eam1104I CTCTTC 3 cut(s) 846, 891, 1406
EarI CTCTTC 3 cut(s) 846, 891, 1406
Ecl136II GAGCTC 1 cut(s) 386
Eco24I GRGCYC 2 cut(s) 388, 1307
Eco53kI GAGCTC 1 cut(s) 386
Eco57I CTGAAG 1 cut(s) 915
EcoICRI GAGCTC 1 cut(s) 386
EcoRII CCWGG 2 cut(s) 667, 1404
EcoT38I GRGCYC 2 cut(s) 388, 1307
FaeI CATG 7 cut(s) 161, 827, 1070, 1105, 1202, 1426, 1554
FaqI GGGAC 1 cut(s) 1300
FatI CATG 7 cut(s) 157, 823, 1066, 1101, 1198, 1422, 1550
FauI CCCGC 1 cut(s) 1276
FblI GTMKAC 1 cut(s) 259
Fnu4HI GCNGC 3 cut(s) 959, 1064, 1293
FokI GGATG 4 cut(s) 937, 1038, 1244, 1345
FriOI GRGCYC 2 cut(s) 388, 1307
Fsp4HI GCNGC 3 cut(s) 959, 1064, 1293
FspBI CTAG 2 cut(s) 876, 1212
GluI GCNGC 3 cut(s) 959, 1064, 1293
HaeIII GGCC 1 cut(s) 761
HapII CCGG 1 cut(s) 114
HgaI GACGC 2 cut(s) 81, 1487
Hin1II CATG 7 cut(s) 161, 827, 1070, 1105, 1202, 1426, 1554
HincII GTYRAC 1 cut(s) 1515
HindII GTYRAC 1 cut(s) 1515
HindIII AAGCTT 1 cut(s) 971
HinfI GANTC 4 cut(s) 302, 731, 745, 1337
HpaI GTTAAC 1 cut(s) 1515
HpaII CCGG 1 cut(s) 114
HphI GGTGA 5 cut(s) 13, 44, 128, 305, 1420
Hpy166II GTNNAC 5 cut(s) 229, 260, 597, 848, 1515
Hpy188I TCNGA 7 cut(s) 166, 307, 750, 910, 1056, 1087, 1302
Hpy188III TCNNGA 5 cut(s) 347, 422, 566, 1148, 1551
Hpy8I GTNNAC 5 cut(s) 229, 260, 597, 848, 1515
HpyAV CCTTC 4 cut(s) 115, 209, 320, 1085
HpyCH4III ACNGT 5 cut(s) 32, 523, 560, 1158, 1519
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 202, 244, 497, 899, 1195, 1289
HpyF3I CTNAG 3 cut(s) 348, 1279, 1434
Hsp92II CATG 7 cut(s) 161, 827, 1070, 1105, 1202, 1426, 1554
KpnI GGTACC 2 cut(s) 559, 1272
KspAI GTTAAC 1 cut(s) 1515
Kzo9I GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
LguI GCTCTTC 1 cut(s) 846
LmnI GCTCC 4 cut(s) 201, 568, 618, 1243
Lsp1109I GCAGC 3 cut(s) 970, 1050, 1304
LweI GCATC 5 cut(s) 157, 499, 1050, 1489, 1490
MaeI CTAG 2 cut(s) 876, 1212
MaeIII GTNAC 2 cut(s) 476, 1330
MalI GATC 7 cut(s) 339, 696, 831, 873, 882, 1122, 1357
MboI GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
MboII GAAGA 7 cut(s) 371, 777, 796, 833, 908, 1069, 1423
MfeI CAATTG 1 cut(s) 689
MflI RGATCY 2 cut(s) 694, 829
MhlI GDGCHC 4 cut(s) 388, 565, 1241, 1307
MluCI AATT 6 cut(s) 189, 359, 689, 1026, 1136, 1255
MseI TTAA 8 cut(s) 132, 182, 192, 428, 773, 1377, 1491, 1514
MslI CAYNNNNRTG 1 cut(s) 114
MspA1I CMGCKG 1 cut(s) 1283
MspI CCGG 1 cut(s) 114
MspR9I CCNGG 2 cut(s) 669, 1406
MunI CAATTG 1 cut(s) 689
Mva1269I GAATGC 1 cut(s) 866
MvaI CCWGG 2 cut(s) 669, 1406
MwoI GCNNNNNNNGC 7 cut(s) 75, 202, 244, 497, 899, 1195, 1289
NdeII GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
NlaIII CATG 7 cut(s) 161, 827, 1070, 1105, 1202, 1426, 1554
NlaIV GGNNCC 3 cut(s) 557, 580, 1270
NmuCI GTSAC 1 cut(s) 476
NspI RCATGY 2 cut(s) 161, 1202
OliI CACNNNNGTG 1 cut(s) 114
PaeI GCATGC 1 cut(s) 1202
PagI TCATGA 1 cut(s) 1550
PciSI GCTCTTC 1 cut(s) 846
PcsI WCGNNNNNNNCGW 2 cut(s) 556, 1129
PctI GAATGC 1 cut(s) 866
PfeI GAWTC 4 cut(s) 302, 731, 745, 1337
PinAI ACCGGT 1 cut(s) 113
PkrI GCNGC 3 cut(s) 960, 1065, 1294
PshAI GACNNNNGTC 1 cut(s) 483
PsiI TTATAA 1 cut(s) 323
Psp124BI GAGCTC 1 cut(s) 388
Psp6I CCWGG 2 cut(s) 667, 1404
PspGI CCWGG 2 cut(s) 667, 1404
PspN4I GGNNCC 3 cut(s) 557, 580, 1270
PstI CTGCAG 2 cut(s) 100, 1191
PstNI CAGNNNCTG 1 cut(s) 1340
PsuI RGATCY 2 cut(s) 694, 829
RsaI GTAC 6 cut(s) 371, 557, 596, 684, 1270, 1460
RsaNI GTAC 6 cut(s) 370, 556, 595, 683, 1269, 1459
RseI CAYNNNNRTG 1 cut(s) 114
SacI GAGCTC 1 cut(s) 388
SapI GCTCTTC 1 cut(s) 846
SaqAI TTAA 8 cut(s) 132, 182, 192, 428, 773, 1377, 1491, 1514
SatI GCNGC 3 cut(s) 959, 1064, 1293
Sau3AI GATC 7 cut(s) 337, 694, 829, 871, 880, 1120, 1355
ScrFI CCNGG 2 cut(s) 669, 1406
SduI GDGCHC 4 cut(s) 388, 565, 1241, 1307
SfaNI GCATC 5 cut(s) 157, 499, 1050, 1489, 1490
SfcI CTRYAG 3 cut(s) 96, 1187, 1390
SgrAI CRCCGGYG 1 cut(s) 113
SmiMI CAYNNNNRTG 1 cut(s) 114
SmlI CTYRAG 5 cut(s) 389, 851, 974, 1148, 1463
SmoI CTYRAG 5 cut(s) 389, 851, 974, 1148, 1463
SphI GCATGC 1 cut(s) 1202
Sse9I AATT 6 cut(s) 189, 359, 689, 1026, 1136, 1255
SsiI CCGC 1 cut(s) 1283
SspI AATATT 1 cut(s) 1093
SspMI CTAG 2 cut(s) 876, 1212
SstI GAGCTC 1 cut(s) 388
StyD4I CCNGG 2 cut(s) 667, 1404
TaaI ACNGT 5 cut(s) 32, 523, 560, 1158, 1519
TaqI TCGA 6 cut(s) 382, 421, 550, 729, 870, 1123
TasI AATT 6 cut(s) 189, 359, 689, 1026, 1136, 1255
TatI WGTACW 2 cut(s) 594, 682
TfiI GAWTC 4 cut(s) 302, 731, 745, 1337
Tru1I TTAA 8 cut(s) 132, 182, 192, 428, 773, 1377, 1491, 1514
Tru9I TTAA 8 cut(s) 132, 182, 192, 428, 773, 1377, 1491, 1514
TscAI CASTG 3 cut(s) 1186, 1191, 1442
TseFI GTSAC 1 cut(s) 476
TseI GCWGC 3 cut(s) 958, 1063, 1292
Tsp45I GTSAC 1 cut(s) 476
TspDTI ATGAA 4 cut(s) 797, 960, 1090, 1194
TspGWI ACGGA 2 cut(s) 711, 1256
TspRI CASTG 3 cut(s) 1186, 1191, 1442
XceI RCATGY 2 cut(s) 161, 1202
XmiI GTMKAC 1 cut(s) 259
XspI CTAG 2 cut(s) 876, 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.