AT2G01720

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
317030 .. 320308
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G01720.1

Sequence Viewer

Length: 1395 bp
ATGGCTGCTCGTATCGGGATCTTCTCCGTCTTCGTAGCTGTATTGTTATCTATTTCTGCATTTTCCTCAGCTCAGGATCTCCAGATCGTAAATGCCGAGCGAAGGATTGATTTAAGCTCACATATCGTGAAGGCCTTCTTGACTCTCAAGGTTGAAAATATTGGGAAAGATCCTGCTGCAGAAATGCTTCTTGCTTTCCCACCTACCCAGATCAAGAATTTGGCTATGGTACAAGCCCTGGCAACTACTGGCAAGAAGAAGAAGAAAACTTATTTGCCATTAGATGTAAAACCAACTGAACAACCTGATGCACCAAATGACACTGGATACTACCGTGTTACGTTTATTAGCCCCTTAGGTCCGGGTGAAACTGTTTCACTTGAGGTGCTTTACATATTGACTCATTCCTTGGAACCTTTCCCAGTGGAGATAACCCAGTCAGAATCTCAATTGGTTTACTATCATGATAGTGCAGTGATATTGTCACCGTATCATGTTAAGCAACAGACAACTTTTATTAAGACTCCTAGTACTAGAGTAGAGTCGTTCACTAGCATTGAACCTGCTAACCGGGCTGGCAAAGAGATCAAATATGGACCATATGAAAATCGTGCTTCATACTCTTACACACCTGTCATCATTCACTTCGAGAATAACAGTCCATTTGCTGTTGTTGAGGAGCTTGTGCGTGAAATTGAGATTTCACACTGGGGTAGCCTTCAGATTACAGAAAATTATAGGTTGACTCATGGGGGAGCGAGGCATAAGGGTGTTTTCTCAAGGGTTGATTATCAATCTAAACGATCGGTCAGTGGTGCATCCTCTTTCAATGCGCTCCTTGCAGTCCTACCTCCCAGAGTGAACTCTGTCTACTACAGGGATGAGATAGGAAACATCTCTACTTCACATTTGCGTACAGGCTTTAGAAAGTCAGAACTTGAATTTGAACCCCGCTACCCATTATTTGGAGGGTGGAGTGCAACTTTTATCATCGGCTATAGAGTTCCATTGGAAGACTATCTCTTTGAAGCATCTGATGGCAGACGTTACTTGAACTTTACCTTTGGGTGCCCGCTCGTCGAAACTATTGTTAACAAGTTGACTATCAAAGTCGTGCTTCCTGAAGGATCAAAGGACCCTTCTGCTGTTTTGCCCTTTACAGTCAATCAAGAGTTGCAGGTCAAATACTCATACCTTGACATTGTGGGAAGAACCGTGGTTGTGTTGCAAAAAGATAACGTAGTTCCCACTCACAACGTACCCTTCCAGGTGTACTATACATTCAAACCAATATACATGCTAGCGGAACCATTCATGCTTGTATCGGCTTTCTTCTTAGTATTTGTGGCTTCGCTTGCGTATGTACACATCGATCTCAATATCGTCAGGAAGTAG

Protein Analysis

464

Amino Acids

52.22

Weight (kDa)

8.29

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribophorin_I PF04597 28 - 454 3.2e-146 Ribophorin I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012079)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 571, 1168
AccB1I GGYRCC 1 cut(s) 1068
AccB7I CCANNNNNTGG 1 cut(s) 965
AccBSI CCGCTC 1 cut(s) 1075
AccI GTMKAC 1 cut(s) 870
AciI CCGC 3 cut(s) 952, 1073, 1304
AclWI GGATC 4 cut(s) 26, 84, 164, 1135
AcsI RAATTY 2 cut(s) 217, 941
AcuI CTGAAG 2 cut(s) 704, 1143
AfaI GTAC 6 cut(s) 231, 532, 916, 1260, 1274, 1365
AfiI CCNNNNNNNGG 2 cut(s) 102, 965
AgsI TTSAA 8 cut(s) 155, 560, 829, 941, 947, 1028, 1054, 1285
AjnI CCWGG 2 cut(s) 237, 1266
AluBI AGCT 4 cut(s) 38, 71, 117, 682
AluI AGCT 4 cut(s) 38, 71, 117, 682
AlwI GGATC 4 cut(s) 26, 84, 164, 1135
AoxI GGCC 1 cut(s) 132
ApeKI GCWGC 2 cut(s) 5, 176
ApoI RAATTY 2 cut(s) 217, 941
ArsI GACNNNNNNTTYG 2 cut(s) 1007, 1039
Asp700I GAANNNNTTC 2 cut(s) 134, 186
AspLEI GCGC 1 cut(s) 835
AspS9I GGNCC 3 cut(s) 359, 596, 1135
AsuC2I CCSGG 2 cut(s) 363, 572
AsuHPI GGTGA 2 cut(s) 377, 477
AsuNHI GCTAGC 1 cut(s) 1300
AvaII GGWCC 3 cut(s) 359, 596, 1135
AxyI CCTNAGG 1 cut(s) 355
BaeGI GKGCMC 1 cut(s) 1073
BaeI ACNNNNGTAYC 2 cut(s) 319, 352
BanI GGYRCC 1 cut(s) 1068
BbsI GAAGAC 2 cut(s) 22, 1020
BbvCI CCTCAGC 1 cut(s) 67
BbvI GCAGC 1 cut(s) 163
BccI CCATC 1 cut(s) 1031
BciT130I CCWGG 2 cut(s) 239, 1268
BciVI GTATCC 1 cut(s) 320
BcnI CCSGG 2 cut(s) 363, 572
BfaI CTAG 4 cut(s) 528, 534, 552, 1301
BfmI CTRYAG 3 cut(s) 177, 874, 997
BfuAI ACCTGC 2 cut(s) 571, 1168
BfuI GTATCC 1 cut(s) 320
BisI GCNGC 2 cut(s) 6, 177
BlsI GCNGC 2 cut(s) 7, 178
BmcAI AGTACT 1 cut(s) 532
Bme1390I CCNGG 4 cut(s) 239, 363, 572, 1268
Bme18I GGWCC 3 cut(s) 359, 596, 1135
BmgT120I GGNCC 3 cut(s) 359, 596, 1135
BmiI GGNNCC 4 cut(s) 414, 1070, 1137, 1308
BmrFI CCNGG 4 cut(s) 239, 363, 572, 1268
BmrI ACTGGG 3 cut(s) 416, 430, 718
BmsI GCATC 3 cut(s) 298, 827, 1040
BmtI GCTAGC 1 cut(s) 1304
BmuI ACTGGG 3 cut(s) 416, 430, 718
BpiI GAAGAC 2 cut(s) 22, 1020
BpmI CTGGAG 1 cut(s) 65
Bpu10I CCTNAGC 2 cut(s) 67, 72
BpuEI CTTGAG 3 cut(s) 131, 401, 763
BpuMI CCSGG 2 cut(s) 363, 572
Bsa29I ATCGAT 1 cut(s) 1371
BsaJI CCNNGG 3 cut(s) 237, 408, 1215
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 965
Bse1I ACTGG 5 cut(s) 253, 328, 422, 436, 713
Bse21I CCTNAGG 1 cut(s) 355
BseBI CCWGG 2 cut(s) 239, 1268
BseCI ATCGAT 1 cut(s) 1371
BseDI CCNNGG 3 cut(s) 237, 408, 1215
BseGI GGATG 2 cut(s) 818, 886
BseLI CCNNNNNNNGG 2 cut(s) 102, 965
BseMII CTCAG 2 cut(s) 81, 86
BseNI ACTGG 5 cut(s) 253, 328, 422, 436, 713
BseRI GAGGAG 1 cut(s) 692
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 1 cut(s) 163
BsgI GTGCAG 1 cut(s) 492
Bsh1285I CGRYCG 1 cut(s) 806
BshFI GGCC 1 cut(s) 134
BshNI GGYRCC 1 cut(s) 1068
BshVI ATCGAT 1 cut(s) 1371
BsiEI CGRYCG 1 cut(s) 806
BsiSI CCGG 2 cut(s) 362, 571
BslI CCNNNNNNNGG 2 cut(s) 102, 965
BsnI GGCC 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp1407I TGTACA 1 cut(s) 1363
Bsp143I GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
BspACI CCGC 3 cut(s) 952, 1073, 1304
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 2 cut(s) 80, 85
BspDI ATCGAT 1 cut(s) 1371
BspHI TCATGA 1 cut(s) 463
BspLI GGNNCC 4 cut(s) 414, 1070, 1137, 1308
BspMAI CTGCAG 1 cut(s) 181
BspMI ACCTGC 2 cut(s) 571, 1168
BspOI GCTAGC 1 cut(s) 1304
BspPI GGATC 4 cut(s) 26, 84, 164, 1135
BspT107I GGYRCC 1 cut(s) 1068
BsrBI CCGCTC 1 cut(s) 1075
BsrGI TGTACA 1 cut(s) 1363
BsrI ACTGG 5 cut(s) 253, 328, 422, 436, 713
BssECI CCNNGG 3 cut(s) 237, 408, 1215
BssMI GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
BssT1I CCWWGG 1 cut(s) 408
Bst2UI CCWGG 2 cut(s) 239, 1268
Bst4CI ACNGT 6 cut(s) 335, 373, 489, 659, 1162, 1216
BstAUI TGTACA 1 cut(s) 1363
BstC8I GCNNGC 4 cut(s) 577, 1073, 1302, 1356
BstDEI CTNAG 4 cut(s) 67, 72, 355, 1336
BstDSI CCRYGG 1 cut(s) 1215
BstF5I GGATG 2 cut(s) 818, 886
BstHHI GCGC 1 cut(s) 835
BstKTI GATC 9 cut(s) 21, 79, 87, 172, 213, 588, 806, 1130, 1375
BstMBI GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
BstMCI CGRYCG 1 cut(s) 806
BstMWI GCNNNNNNNGC 3 cut(s) 572, 839, 1355
BstNI CCWGG 2 cut(s) 239, 1268
BstNSI RCATGY 1 cut(s) 1300
BstSCI CCNGG 4 cut(s) 237, 361, 570, 1266
BstSFI CTRYAG 3 cut(s) 177, 874, 997
BstSLI GKGCMC 1 cut(s) 1073
BstV1I GCAGC 1 cut(s) 163
BstV2I GAAGAC 2 cut(s) 22, 1020
BstX2I RGATCY 3 cut(s) 18, 76, 169
BstYI RGATCY 3 cut(s) 18, 76, 169
Bsu15I ATCGAT 1 cut(s) 1371
Bsu36I CCTNAGG 1 cut(s) 355
BsuI GTATCC 1 cut(s) 320
BsuRI GGCC 1 cut(s) 134
BsuTUI ATCGAT 1 cut(s) 1371
BtgI CCRYGG 1 cut(s) 1215
BtsCI GGATG 2 cut(s) 818, 886
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 5 cut(s) 321, 429, 480, 706, 817
BveI ACCTGC 2 cut(s) 571, 1168
Cac8I GCNNGC 4 cut(s) 577, 1073, 1302, 1356
CciI TCATGA 1 cut(s) 463
CfoI GCGC 1 cut(s) 835
Cfr13I GGNCC 3 cut(s) 359, 596, 1135
ClaI ATCGAT 1 cut(s) 1371
Csp6I GTAC 6 cut(s) 230, 531, 915, 1259, 1273, 1364
CviAII CATG 5 cut(s) 464, 494, 749, 1297, 1315
CviQI GTAC 6 cut(s) 230, 531, 915, 1259, 1273, 1364
DdeI CTNAG 4 cut(s) 67, 72, 355, 1336
DpnI GATC 9 cut(s) 20, 78, 86, 171, 212, 587, 805, 1129, 1374
DpnII GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
Eco130I CCWWGG 1 cut(s) 408
Eco147I AGGCCT 1 cut(s) 134
Eco47I GGWCC 3 cut(s) 359, 596, 1135
Eco57I CTGAAG 2 cut(s) 704, 1143
Eco81I CCTNAGG 1 cut(s) 355
EcoO109I RGGNCCY 1 cut(s) 1135
EcoRII CCWGG 2 cut(s) 237, 1266
EcoT14I CCWWGG 1 cut(s) 408
ErhI CCWWGG 1 cut(s) 408
FaeI CATG 5 cut(s) 467, 497, 752, 1300, 1318
FalI AAGNNNNNCTT 4 cut(s) 122, 154, 1101, 1133
FatI CATG 5 cut(s) 463, 493, 748, 1296, 1314
FauI CCCGC 2 cut(s) 959, 1080
FauNDI CATATG 1 cut(s) 601
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 2 cut(s) 6, 177
FokI GGATG 2 cut(s) 805, 893
Fsp4HI GCNGC 2 cut(s) 6, 177
FspBI CTAG 4 cut(s) 528, 534, 552, 1301
GlaI GCGC 1 cut(s) 834
GluI GCNGC 2 cut(s) 6, 177
GsuI CTGGAG 1 cut(s) 65
HaeIII GGCC 1 cut(s) 134
HapII CCGG 2 cut(s) 362, 571
HhaI GCGC 1 cut(s) 835
Hin1II CATG 5 cut(s) 467, 497, 752, 1300, 1318
Hin6I GCGC 1 cut(s) 833
HinP1I GCGC 1 cut(s) 833
HincII GTYRAC 3 cut(s) 744, 1093, 1101
HindII GTYRAC 3 cut(s) 744, 1093, 1101
HinfI GANTC 6 cut(s) 142, 400, 443, 523, 542, 745
HpaI GTTAAC 1 cut(s) 1093
HpaII CCGG 2 cut(s) 362, 571
HphI GGTGA 2 cut(s) 377, 477
Hpy166II GTNNAC 9 cut(s) 457, 549, 744, 862, 871, 1093, 1101, 1273, 1366
Hpy188I TCNGA 4 cut(s) 442, 723, 934, 1036
Hpy8I GTNNAC 9 cut(s) 457, 549, 744, 862, 871, 1093, 1101, 1273, 1366
Hpy99I CGWCG 1 cut(s) 1082
HpyAV CCTTC 7 cut(s) 96, 124, 145, 728, 1118, 1149, 1273
HpyCH4III ACNGT 6 cut(s) 335, 373, 489, 659, 1162, 1216
HpyCH4IV ACGT 4 cut(s) 341, 1045, 1239, 1257
HpyCH4V TGCA 9 cut(s) 59, 179, 311, 473, 818, 842, 980, 1177, 1228
HpyF10VI GCNNNNNNNGC 3 cut(s) 572, 839, 1355
HpyF3I CTNAG 4 cut(s) 67, 72, 355, 1336
HpySE526I ACGT 4 cut(s) 341, 1045, 1239, 1257
Hsp92II CATG 5 cut(s) 467, 497, 752, 1300, 1318
HspAI GCGC 1 cut(s) 833
KspAI GTTAAC 1 cut(s) 1093
Kzo9I GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
LmnI GCTCC 3 cut(s) 679, 755, 840
Lsp1109I GCAGC 1 cut(s) 163
LweI GCATC 3 cut(s) 298, 827, 1040
MaeI CTAG 4 cut(s) 528, 534, 552, 1301
MaeII ACGT 4 cut(s) 341, 1045, 1239, 1257
MaeIII GTNAC 3 cut(s) 337, 483, 1046
MalI GATC 9 cut(s) 20, 78, 86, 171, 212, 587, 805, 1129, 1374
MbiI CCGCTC 1 cut(s) 1075
MboI GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
MboII GAAGA 8 cut(s) 13, 22, 268, 271, 274, 1025, 1221, 1324
MfeI CAATTG 1 cut(s) 449
MflI RGATCY 3 cut(s) 18, 76, 169
MhlI GDGCHC 1 cut(s) 1073
MluCI AATT 5 cut(s) 217, 449, 693, 733, 941
MlyI GAGTC 5 cut(s) 136, 394, 517, 551, 739
MnlI CCTC 7 cut(s) 76, 376, 670, 753, 832, 861, 962
MroXI GAANNNNTTC 2 cut(s) 134, 186
MseI TTAA 4 cut(s) 113, 498, 519, 1092
MslI CAYNNNNRTG 2 cut(s) 468, 768
MspI CCGG 2 cut(s) 362, 571
MspR9I CCNGG 4 cut(s) 239, 363, 572, 1268
MunI CAATTG 1 cut(s) 449
MvaI CCWGG 2 cut(s) 239, 1268
MwoI GCNNNNNNNGC 3 cut(s) 572, 839, 1355
NciI CCSGG 2 cut(s) 363, 572
NdeI CATATG 1 cut(s) 601
NdeII GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
NheI GCTAGC 1 cut(s) 1300
NlaIII CATG 5 cut(s) 467, 497, 752, 1300, 1318
NlaIV GGNNCC 4 cut(s) 414, 1070, 1137, 1308
NmeAIII GCCGAG 1 cut(s) 121
NmuCI GTSAC 1 cut(s) 483
NspI RCATGY 1 cut(s) 1300
PagI TCATGA 1 cut(s) 463
PceI AGGCCT 1 cut(s) 134
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PdmI GAANNNNTTC 2 cut(s) 134, 186
PfeI GAWTC 1 cut(s) 443
PflMI CCANNNNNTGG 1 cut(s) 965
PkrI GCNGC 2 cut(s) 7, 178
Ple19I CGATCG 1 cut(s) 806
PleI GAGTC 5 cut(s) 136, 394, 517, 550, 739
PpsI GAGTC 5 cut(s) 136, 394, 517, 550, 739
PpuMI RGGWCCY 1 cut(s) 1135
Psp5II RGGWCCY 1 cut(s) 1135
Psp6I CCWGG 2 cut(s) 237, 1266
PspGI CCWGG 2 cut(s) 237, 1266
PspN4I GGNNCC 4 cut(s) 414, 1070, 1137, 1308
PspPI GGNCC 3 cut(s) 359, 596, 1135
PspPPI RGGWCCY 1 cut(s) 1135
PsrI GAACNNNNNNTAC 2 cut(s) 854, 886
PstI CTGCAG 1 cut(s) 181
PsuI RGATCY 3 cut(s) 18, 76, 169
PvuI CGATCG 1 cut(s) 806
RsaI GTAC 6 cut(s) 231, 532, 916, 1260, 1274, 1365
RsaNI GTAC 6 cut(s) 230, 531, 915, 1259, 1273, 1364
RseI CAYNNNNRTG 2 cut(s) 468, 768
SaqAI TTAA 4 cut(s) 113, 498, 519, 1092
SatI GCNGC 2 cut(s) 6, 177
Sau3AI GATC 9 cut(s) 18, 76, 84, 169, 210, 585, 803, 1127, 1372
Sau96I GGNCC 3 cut(s) 359, 596, 1135
ScaI AGTACT 1 cut(s) 532
SchI GAGTC 5 cut(s) 136, 394, 517, 551, 739
ScrFI CCNGG 4 cut(s) 239, 363, 572, 1268
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 3 cut(s) 298, 827, 1040
SfcI CTRYAG 3 cut(s) 177, 874, 997
SinI GGWCC 3 cut(s) 359, 596, 1135
SmiMI CAYNNNNRTG 2 cut(s) 468, 768
SmlI CTYRAG 3 cut(s) 146, 380, 778
SmoI CTYRAG 3 cut(s) 146, 380, 778
Sse9I AATT 5 cut(s) 217, 449, 693, 733, 941
SseBI AGGCCT 1 cut(s) 134
SsiI CCGC 3 cut(s) 952, 1073, 1304
SspI AATATT 1 cut(s) 160
SspMI CTAG 4 cut(s) 528, 534, 552, 1301
StuI AGGCCT 1 cut(s) 134
StyD4I CCNGG 4 cut(s) 237, 361, 570, 1266
StyI CCWWGG 1 cut(s) 408
TaaI ACNGT 6 cut(s) 335, 373, 489, 659, 1162, 1216
TaiI ACGT 4 cut(s) 344, 1048, 1242, 1260
TaqI TCGA 3 cut(s) 648, 1080, 1371
TaqII GACCGA 1 cut(s) 796
TasI AATT 5 cut(s) 217, 449, 693, 733, 941
TatI WGTACW 3 cut(s) 530, 1272, 1363
TfiI GAWTC 1 cut(s) 443
Tru1I TTAA 4 cut(s) 113, 498, 519, 1092
Tru9I TTAA 4 cut(s) 113, 498, 519, 1092
TscAI CASTG 5 cut(s) 328, 429, 480, 713, 817
TseFI GTSAC 1 cut(s) 483
TseI GCWGC 2 cut(s) 5, 176
Tsp45I GTSAC 1 cut(s) 483
TspDTI ATGAA 3 cut(s) 606, 618, 1303
TspGWI ACGGA 1 cut(s) 16
TspRI CASTG 5 cut(s) 328, 429, 480, 713, 817
Van91I CCANNNNNTGG 1 cut(s) 965
VpaK11BI GGWCC 3 cut(s) 359, 596, 1135
XapI RAATTY 2 cut(s) 217, 941
XceI RCATGY 1 cut(s) 1300
XmiI GTMKAC 1 cut(s) 870
XmnI GAANNNNTTC 2 cut(s) 134, 186
XspI CTAG 4 cut(s) 528, 534, 552, 1301
ZrmI AGTACT 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.