Rorug01G0305500

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
42119895 .. 42120309
415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0305500.1

Sequence Viewer

Length: 285 bp
ATGATTTCTAATCCAAGTCTGATCTACTACGCCTGCCTTGCCCAGAAGATCGGCAAGATTGCGAAAAAGCCCGAAATCGGAGCCCTTGCTCAGAAATGCATCGAGAAATCCCCACCGCACCATTCCTTGTACACCCACACTGTTAGAAAGCGAACCTATATCTTCTCAATGGCTGACCCTTTTGTGATCTTTGGCATTTTTGATCAAGATCTCAATCAATCTAAGGCGCTTTTGTTCTTGAATAGATTGAGATGCGACGTCGAGAGGATTAATGGAACTGGGTAG

Protein Analysis

94

Amino Acids

10.66

Weight (kDa)

9.47

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012079)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 261
AciI CCGC 1 cut(s) 116
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 1 cut(s) 131
AfiI CCNNNNNNNGG 1 cut(s) 77
AgsI TTSAA 1 cut(s) 241
AseI ATTAAT 1 cut(s) 270
AspLEI GCGC 1 cut(s) 229
BanII GRGCYC 1 cut(s) 85
BclI TGATCA 1 cut(s) 202
BfoI RGCGCY 1 cut(s) 230
BglII AGATCT 1 cut(s) 208
BmiI GGNNCC 1 cut(s) 82
BmsI GCATC 2 cut(s) 108, 242
BsaBI GATNNNNATC 2 cut(s) 207, 213
BsaHI GRCGYC 1 cut(s) 258
Bsc4I CCNNNNNNNGG 1 cut(s) 77
Bse1I ACTGG 1 cut(s) 283
Bse8I GATNNNNATC 2 cut(s) 207, 213
BseJI GATNNNNATC 2 cut(s) 207, 213
BseLI CCNNNNNNNGG 1 cut(s) 77
BseMII CTCAG 1 cut(s) 104
BseNI ACTGG 1 cut(s) 283
BslI CCNNNNNNNGG 1 cut(s) 77
Bsp1286I GDGCHC 1 cut(s) 85
Bsp1407I TGTACA 1 cut(s) 129
Bsp143I GATC 5 cut(s) 21, 48, 186, 202, 208
BspACI CCGC 1 cut(s) 116
BspCNI CTCAG 1 cut(s) 103
BspLI GGNNCC 1 cut(s) 82
BsrGI TGTACA 1 cut(s) 129
BsrI ACTGG 1 cut(s) 283
BssMI GATC 5 cut(s) 21, 48, 186, 202, 208
BssNI GRCGYC 1 cut(s) 258
Bst4CI ACNGT 1 cut(s) 142
BstACI GRCGYC 1 cut(s) 258
BstAUI TGTACA 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 34
BstDEI CTNAG 2 cut(s) 90, 222
BstH2I RGCGCY 1 cut(s) 230
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 5 cut(s) 24, 51, 189, 205, 211
BstMBI GATC 5 cut(s) 21, 48, 186, 202, 208
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstX2I RGATCY 1 cut(s) 208
BstYI RGATCY 1 cut(s) 208
BtsIMutI CAGTG 1 cut(s) 138
Cac8I GCNNGC 1 cut(s) 34
CfoI GCGC 1 cut(s) 229
Csp6I GTAC 1 cut(s) 130
CviJI RGCY 3 cut(s) 70, 83, 173
CviKI_1 RGCY 3 cut(s) 70, 83, 173
CviQI GTAC 1 cut(s) 130
DdeI CTNAG 2 cut(s) 90, 222
DpnI GATC 5 cut(s) 23, 50, 188, 204, 210
DpnII GATC 5 cut(s) 21, 48, 186, 202, 208
Eco24I GRGCYC 1 cut(s) 85
EcoT22I ATGCAT 1 cut(s) 101
EcoT38I GRGCYC 1 cut(s) 85
FaiI YATR 1 cut(s) 159
FbaI TGATCA 1 cut(s) 202
FriOI GRGCYC 1 cut(s) 85
GlaI GCGC 1 cut(s) 228
HaeII RGCGCY 1 cut(s) 230
HhaI GCGC 1 cut(s) 229
Hin1I GRCGYC 1 cut(s) 258
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
Hpy166II GTNNAC 1 cut(s) 132
Hpy188I TCNGA 3 cut(s) 21, 80, 93
Hpy188III TCNNGA 4 cut(s) 103, 206, 238, 262
Hpy8I GTNNAC 1 cut(s) 132
Hpy99I CGWCG 2 cut(s) 260, 263
HpyCH4III ACNGT 1 cut(s) 142
HpyCH4IV ACGT 1 cut(s) 258
HpyCH4V TGCA 1 cut(s) 99
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
HpyF3I CTNAG 2 cut(s) 90, 222
HpySE526I ACGT 1 cut(s) 258
Hsp92I GRCGYC 1 cut(s) 258
HspAI GCGC 1 cut(s) 227
Ksp22I TGATCA 1 cut(s) 202
Kzo9I GATC 5 cut(s) 21, 48, 186, 202, 208
LmnI GCTCC 1 cut(s) 80
LpnPI CCDG 3 cut(s) 46, 56, 264
LweI GCATC 2 cut(s) 108, 242
MaeII ACGT 1 cut(s) 258
MalI GATC 5 cut(s) 23, 50, 188, 204, 210
MboI GATC 5 cut(s) 21, 48, 186, 202, 208
MboII GAAGA 2 cut(s) 58, 154
MflI RGATCY 1 cut(s) 208
MhlI GDGCHC 1 cut(s) 85
MnlI CCTC 1 cut(s) 258
Mph1103I ATGCAT 1 cut(s) 101
MseI TTAA 1 cut(s) 270
MwoI GCNNNNNNNGC 1 cut(s) 38
NdeII GATC 5 cut(s) 21, 48, 186, 202, 208
NlaIV GGNNCC 1 cut(s) 82
NsiI ATGCAT 1 cut(s) 101
PshBI ATTAAT 1 cut(s) 270
PspN4I GGNNCC 1 cut(s) 82
PsuI RGATCY 1 cut(s) 208
RsaI GTAC 1 cut(s) 131
RsaNI GTAC 1 cut(s) 130
SaqAI TTAA 1 cut(s) 270
Sau3AI GATC 5 cut(s) 21, 48, 186, 202, 208
SduI GDGCHC 1 cut(s) 85
SetI ASST 2 cut(s) 158, 261
SfaNI GCATC 2 cut(s) 108, 242
SsiI CCGC 1 cut(s) 116
TaaI ACNGT 1 cut(s) 142
TaiI ACGT 1 cut(s) 261
TaqI TCGA 2 cut(s) 102, 261
TatI WGTACW 1 cut(s) 129
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TscAI CASTG 1 cut(s) 145
TspRI CASTG 1 cut(s) 145
VspI ATTAAT 1 cut(s) 270
ZraI GACGTC 1 cut(s) 259
Zsp2I ATGCAT 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.