MD01G1107800.v1.1

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
22044879 .. 22049347
4469 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1107800.v1.1.491

Sequence Viewer

Length: 1437 bp
ATGGAAGCTCTGCGAAGCTTAGGTCAACTAGTCCTAGCCTTGTGGATCTTCTCCCATCTCTCCCTGCTCGCGTACTCATCTTCCACTCAGGATCTCCAGATCATCACCGCAGAGCGCAGAATTGACTTGACCTCTCATATTGTGAAGGTTTTCTTGACTTTAAAGGTCGAAAACACTGGTACATCTCCTGTTTCGGAAGTACTCCTTGCTTTTCCACCCACACAGGTTGATCACCTAGCATCACTCAAAGCAGCTATCACTGTTGGAAAAAAGAAAAAGAAAAGTTATGTGCCCCTTGAAGTCAATCCCACTGAGCTACCTGATGCACCAAATGGGGCTAAATCGTTTTCTATCTCATTGCTCAACCCACTAAATGCTGGTGAAACTGCAACACTAGAGGTGCTTTACATATTGACACATTCTCTGGAGCCTTTCCCAGCGGAGATAAGCCAATCAGAGTCTCAGTTGGTCTACTACCGTGATAGTGCAATCATATTGTCTCCATACTATATCAAGCAGCAGACAACTTTTATAAGAACGCCTAGTACTAGGGTGGAATCATTTACAAGAGTAGAGTCCACTAACCGTGCTGGTTCCGAAATAAAGTATGGGCCATACAAGGATCGTCCAACATACTCTTATTCTCCAGTAATTGTTCATTTTGAGAATAATAATCCCTTTGCTGTTGTTGAGGAGCTTGTACGTGAAGTCGAAGTATCTCACTGGGGCAGTCTTCAGATCACAGAGCATTACAAGTTGGCACATGCTGGTGCTCGACACAAAGGAATATTTTCAAGGGTAGACTATCAATCTAAGCCACATGCTGGTGGTGTCTCTTCATTCAAACATCTTCTAGCCAGACTACCTCCTAGGGTCCATTCTGTCTACTACCGGGATGAAATTGGGAACATCTCATCATCGCATTTACGTACAGATTATCTAAGGTCGGATCTTGAAATTGAACCACGCTATCCTTTATTTGGAGGTTGGAAAGCTACATTTGTGATTGGGTATGGGTTACCATTGGAAGATTTCCTTTTTGAGTCACCTGATGGCAGGCGATACCTCAATTTCACTTTTGGTTGTCCTCTCGCTGAGACGGTGGTAGACAAGTTAACTGTAAAAGTTGTGCTACCAGAGGGATCAAAAGATCCTTCTGCTGTGGTTCCTTTTTCGGTTGAGCAACATCTAGAGACCAAATATTCATACCTTGATGTTGCTGGAAGGACAGTGGTGGTTCTTGAAAAGAGGAACGTAGTTCCAGAGCACAACTCTCGTTTCCAGGTTTACTACACCTTCAACCCAATCTTTATGCTGGCAGAACCCCTGATGTTGGTGTCTACGTTTTTCTTCATTTTCATGGCTAGTATCGTTAAGTGGAGGAGAGGAACCAGGACTGTTGAGCGTGAACGTCGCCAGCGCCACTTTGGGTTCTAA

Protein Analysis

479

Amino Acids

54.26

Weight (kDa)

8.79

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribophorin_I PF04597 34 - 458 1.7e-147 Ribophorin I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012079)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 533
AccB7I CCANNNNNTGG 1 cut(s) 824
AccI GTMKAC 5 cut(s) 471, 801, 885, 1107, 1340
AccII CGCG 1 cut(s) 71
AciI CCGC 2 cut(s) 108, 440
AclWI GGATC 6 cut(s) 53, 99, 630, 957, 1145, 1150
AcuI CTGAAG 1 cut(s) 719
AfaI GTAC 6 cut(s) 74, 181, 201, 547, 702, 931
AfiI CCNNNNNNNGG 3 cut(s) 824, 980, 1333
AgsI TTSAA 7 cut(s) 299, 795, 844, 956, 962, 1244, 1300
AhlI ACTAGT 1 cut(s) 28
AjnI CCWGG 2 cut(s) 1281, 1391
AluBI AGCT 6 cut(s) 8, 18, 254, 316, 697, 995
AluI AGCT 6 cut(s) 8, 18, 254, 316, 697, 995
Alw21I GWGCWC 2 cut(s) 775, 1269
Alw26I GTCTC 5 cut(s) 465, 504, 838, 1091, 1187
AlwI GGATC 6 cut(s) 53, 99, 630, 957, 1145, 1150
AoxI GGCC 1 cut(s) 611
ApeKI GCWGC 2 cut(s) 251, 517
ArsI GACNNNNNNTTYG 2 cut(s) 7, 39
Asp700I GAANNNNTTC 2 cut(s) 149, 790
AspA2I CCTAGG 1 cut(s) 869
AspLEI GCGC 2 cut(s) 117, 1422
AspS9I GGNCC 2 cut(s) 611, 874
AsuC2I CCSGG 1 cut(s) 893
AsuHPI GGTGA 4 cut(s) 97, 224, 392, 1038
AvaII GGWCC 1 cut(s) 874
AvrII CCTAGG 1 cut(s) 869
BaeGI GKGCMC 1 cut(s) 294
BbsI GAAGAC 1 cut(s) 725
Bbv12I GWGCWC 2 cut(s) 775, 1269
BbvI GCAGC 2 cut(s) 263, 529
BccI CCATC 2 cut(s) 63, 1046
BcgI CGANNNNNNTGC 2 cut(s) 1256, 1290
BciT130I CCWGG 2 cut(s) 1283, 1393
BclI TGATCA 1 cut(s) 229
BcnI CCSGG 1 cut(s) 893
BcoDI GTCTC 5 cut(s) 465, 504, 838, 1091, 1187
BcuI ACTAGT 1 cut(s) 28
BfoI RGCGCY 1 cut(s) 1423
BisI GCNGC 2 cut(s) 252, 518
BlnI CCTAGG 1 cut(s) 869
BlsI GCNGC 2 cut(s) 253, 519
BmcAI AGTACT 2 cut(s) 201, 547
Bme1390I CCNGG 3 cut(s) 893, 1283, 1393
Bme18I GGWCC 1 cut(s) 874
BmgT120I GGNCC 2 cut(s) 611, 874
BmiI GGNNCC 5 cut(s) 429, 595, 875, 1167, 1390
BmrFI CCNGG 3 cut(s) 893, 1283, 1393
BmrI ACTGGG 1 cut(s) 733
BmsI GCATC 2 cut(s) 248, 313
BmuI ACTGGG 1 cut(s) 733
BpiI GAAGAC 1 cut(s) 725
BplI GAGNNNNNCTC 2 cut(s) 1256, 1288
BpmI CTGGAG 3 cut(s) 80, 446, 630
Bpu10I CCTNAGC 1 cut(s) 19
BpuMI CCSGG 1 cut(s) 893
BsaAI YACGTR 2 cut(s) 704, 929
BsaI GGTCTC 1 cut(s) 1187
BsaJI CCNNGG 1 cut(s) 869
Bsc4I CCNNNNNNNGG 3 cut(s) 824, 980, 1333
Bse1I ACTGG 3 cut(s) 181, 647, 728
Bse3DI GCAATG 1 cut(s) 356
BseBI CCWGG 2 cut(s) 1283, 1393
BseDI CCNNGG 1 cut(s) 869
BseGI GGATG 1 cut(s) 901
BseLI CCNNNNNNNGG 3 cut(s) 824, 980, 1333
BseMI GCAATG 1 cut(s) 356
BseMII CTCAG 4 cut(s) 101, 303, 476, 1086
BseNI ACTGG 3 cut(s) 181, 647, 728
BseRI GAGGAG 2 cut(s) 707, 1396
BseSI GKGCMC 1 cut(s) 294
BseXI GCAGC 2 cut(s) 263, 529
BseYI CCCAGC 1 cut(s) 436
Bsh1236I CGCG 1 cut(s) 71
BshFI GGCC 1 cut(s) 613
BsiHKAI GWGCWC 2 cut(s) 775, 1269
BsiSI CCGG 1 cut(s) 892
BslI CCNNNNNNNGG 3 cut(s) 824, 980, 1333
BsmAI GTCTC 5 cut(s) 465, 504, 838, 1091, 1187
BsmBI CGTCTC 1 cut(s) 1091
BsnI GGCC 1 cut(s) 613
Bso31I GGTCTC 1 cut(s) 1187
Bsp1286I GDGCHC 3 cut(s) 294, 775, 1269
Bsp143I GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
BspACI CCGC 2 cut(s) 108, 440
BspANI GGCC 1 cut(s) 613
BspCNI CTCAG 4 cut(s) 100, 304, 475, 1087
BspFNI CGCG 1 cut(s) 71
BspLI GGNNCC 5 cut(s) 429, 595, 875, 1167, 1390
BspPI GGATC 6 cut(s) 53, 99, 630, 957, 1145, 1150
BspTNI GGTCTC 1 cut(s) 1187
BsrDI GCAATG 1 cut(s) 356
BsrI ACTGG 3 cut(s) 181, 647, 728
BssECI CCNNGG 1 cut(s) 869
BssMI GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
BssT1I CCWWGG 1 cut(s) 869
Bst2UI CCWGG 2 cut(s) 1283, 1393
Bst4CI ACNGT 7 cut(s) 262, 479, 587, 1102, 1120, 1231, 1399
Bst6I CTCTTC 1 cut(s) 841
BstBAI YACGTR 2 cut(s) 704, 929
BstC8I GCNNGC 4 cut(s) 69, 1058, 1317, 1418
BstDEI CTNAG 7 cut(s) 19, 87, 312, 462, 813, 941, 1095
BstEII GGTNACC 1 cut(s) 1017
BstF5I GGATG 1 cut(s) 901
BstFNI CGCG 1 cut(s) 71
BstH2I RGCGCY 1 cut(s) 1423
BstHHI GCGC 2 cut(s) 117, 1422
BstKTI GATC 9 cut(s) 48, 94, 102, 232, 625, 741, 952, 1145, 1153
BstMAI GTCTC 5 cut(s) 465, 504, 838, 1091, 1187
BstMBI GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
BstNI CCWGG 2 cut(s) 1283, 1393
BstNSI RCATGY 2 cut(s) 767, 824
BstPI GGTNACC 1 cut(s) 1017
BstSCI CCNGG 3 cut(s) 891, 1281, 1391
BstSLI GKGCMC 1 cut(s) 294
BstSNI TACGTA 1 cut(s) 929
BstUI CGCG 1 cut(s) 71
BstV1I GCAGC 2 cut(s) 263, 529
BstV2I GAAGAC 1 cut(s) 725
BstX2I RGATCY 4 cut(s) 45, 91, 949, 1150
BstYI RGATCY 4 cut(s) 45, 91, 949, 1150
BsuRI GGCC 1 cut(s) 613
BtgZI GCGATG 1 cut(s) 903
BtsCI GGATG 1 cut(s) 901
BtsIMutI CAGTG 5 cut(s) 174, 258, 309, 721, 1236
Cac8I GCNNGC 4 cut(s) 69, 1058, 1317, 1418
CfoI GCGC 2 cut(s) 117, 1422
Cfr13I GGNCC 2 cut(s) 611, 874
Csp6I GTAC 6 cut(s) 73, 180, 200, 546, 701, 930
CspCI CAANNNNNGTGG 2 cut(s) 208, 243
CviAII CATG 3 cut(s) 764, 821, 1360
CviQI GTAC 6 cut(s) 73, 180, 200, 546, 701, 930
DdeI CTNAG 7 cut(s) 19, 87, 312, 462, 813, 941, 1095
DpnI GATC 9 cut(s) 47, 93, 101, 231, 624, 740, 951, 1144, 1152
DpnII GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
DraI TTTAAA 1 cut(s) 162
Eam1104I CTCTTC 1 cut(s) 841
EarI CTCTTC 1 cut(s) 841
Eco105I TACGTA 1 cut(s) 929
Eco130I CCWWGG 1 cut(s) 869
Eco31I GGTCTC 1 cut(s) 1187
Eco47I GGWCC 1 cut(s) 874
Eco57I CTGAAG 1 cut(s) 719
Eco91I GGTNACC 1 cut(s) 1017
EcoO65I GGTNACC 1 cut(s) 1017
EcoRII CCWGG 2 cut(s) 1281, 1391
EcoT14I CCWWGG 1 cut(s) 869
ErhI CCWWGG 1 cut(s) 869
Esp3I CGTCTC 1 cut(s) 1091
FaeI CATG 3 cut(s) 767, 824, 1363
FalI AAGNNNNNCTT 6 cut(s) 137, 169, 189, 221, 1020, 1052
FatI CATG 3 cut(s) 763, 820, 1359
FbaI TGATCA 1 cut(s) 229
FblI GTMKAC 5 cut(s) 471, 801, 885, 1107, 1340
Fnu4HI GCNGC 2 cut(s) 252, 518
FokI GGATG 1 cut(s) 908
Fsp4HI GCNGC 2 cut(s) 252, 518
GlaI GCGC 2 cut(s) 116, 1421
GluI GCNGC 2 cut(s) 252, 518
GsaI CCCAGC 1 cut(s) 440
GsuI CTGGAG 3 cut(s) 80, 446, 630
HaeII RGCGCY 1 cut(s) 1423
HaeIII GGCC 1 cut(s) 613
HapII CCGG 1 cut(s) 892
HhaI GCGC 2 cut(s) 117, 1422
Hin1II CATG 3 cut(s) 767, 824, 1363
Hin6I GCGC 2 cut(s) 115, 1420
HinP1I GCGC 2 cut(s) 115, 1420
HincII GTYRAC 2 cut(s) 26, 1116
HindII GTYRAC 2 cut(s) 26, 1116
HindIII AAGCTT 1 cut(s) 16
HinfI GANTC 4 cut(s) 458, 557, 575, 1043
HpaI GTTAAC 1 cut(s) 1116
HpaII CCGG 1 cut(s) 892
HphI GGTGA 4 cut(s) 97, 224, 392, 1038
Hpy188I TCNGA 5 cut(s) 196, 457, 598, 738, 949
Hpy188III TCNNGA 8 cut(s) 89, 97, 154, 425, 953, 1190, 1241, 1262
Hpy99I CGWCG 1 cut(s) 1416
HpyAV CCTTC 4 cut(s) 139, 1164, 1218, 1306
HpyCH4III ACNGT 7 cut(s) 262, 479, 587, 1102, 1120, 1231, 1399
HpyCH4IV ACGT 5 cut(s) 703, 928, 1254, 1343, 1411
HpyCH4V TGCA 3 cut(s) 326, 389, 488
HpyF3I CTNAG 7 cut(s) 19, 87, 312, 462, 813, 941, 1095
HpySE526I ACGT 5 cut(s) 703, 928, 1254, 1343, 1411
Hsp92II CATG 3 cut(s) 767, 824, 1363
HspAI GCGC 2 cut(s) 115, 1420
Ksp22I TGATCA 1 cut(s) 229
KspAI GTTAAC 1 cut(s) 1116
Kzo9I GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
LmnI GCTCC 2 cut(s) 427, 694
Lsp1109I GCAGC 2 cut(s) 263, 529
LweI GCATC 2 cut(s) 248, 313
MaeII ACGT 5 cut(s) 703, 928, 1254, 1343, 1411
MaeIII GTNAC 2 cut(s) 1017, 1044
MalI GATC 9 cut(s) 47, 93, 101, 231, 624, 740, 951, 1144, 1152
MboI GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
MboII GAAGA 7 cut(s) 40, 72, 725, 828, 842, 1040, 1342
MflI RGATCY 4 cut(s) 45, 91, 949, 1150
MhlI GDGCHC 3 cut(s) 294, 775, 1269
MluCI AATT 5 cut(s) 120, 651, 900, 957, 1069
MlyI GAGTC 3 cut(s) 467, 584, 1052
MmeI TCCRAC 4 cut(s) 244, 653, 927, 968
MroXI GAANNNNTTC 2 cut(s) 149, 790
MseI TTAA 3 cut(s) 161, 1115, 1374
MslI CAYNNNNRTG 3 cut(s) 768, 825, 1358
MspA1I CMGCKG 1 cut(s) 440
MspI CCGG 1 cut(s) 892
MspR9I CCNGG 3 cut(s) 893, 1283, 1393
MvaI CCWGG 2 cut(s) 1283, 1393
MvnI CGCG 1 cut(s) 71
NciI CCSGG 1 cut(s) 893
NdeII GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
NlaIII CATG 3 cut(s) 767, 824, 1363
NlaIV GGNNCC 5 cut(s) 429, 595, 875, 1167, 1390
NmuCI GTSAC 1 cut(s) 1044
NspI RCATGY 2 cut(s) 767, 824
PdmI GAANNNNTTC 2 cut(s) 149, 790
PfeI GAWTC 1 cut(s) 557
PflMI CCANNNNNTGG 1 cut(s) 824
PkrI GCNGC 2 cut(s) 253, 519
PleI GAGTC 3 cut(s) 466, 583, 1051
PpsI GAGTC 3 cut(s) 466, 583, 1051
Ppu21I YACGTR 2 cut(s) 704, 929
PsiI TTATAA 1 cut(s) 533
Psp6I CCWGG 2 cut(s) 1281, 1391
PspEI GGTNACC 1 cut(s) 1017
PspFI CCCAGC 1 cut(s) 436
PspGI CCWGG 2 cut(s) 1281, 1391
PspN4I GGNNCC 5 cut(s) 429, 595, 875, 1167, 1390
PspPI GGNCC 2 cut(s) 611, 874
PsrI GAACNNNNNNTAC 2 cut(s) 529, 561
PsuI RGATCY 4 cut(s) 45, 91, 949, 1150
RsaI GTAC 6 cut(s) 74, 181, 201, 547, 702, 931
RsaNI GTAC 6 cut(s) 73, 180, 200, 546, 701, 930
RseI CAYNNNNRTG 3 cut(s) 768, 825, 1358
SaqAI TTAA 3 cut(s) 161, 1115, 1374
SatI GCNGC 2 cut(s) 252, 518
Sau3AI GATC 9 cut(s) 45, 91, 99, 229, 622, 738, 949, 1142, 1150
Sau96I GGNCC 2 cut(s) 611, 874
ScaI AGTACT 2 cut(s) 201, 547
SchI GAGTC 3 cut(s) 467, 584, 1052
ScrFI CCNGG 3 cut(s) 893, 1283, 1393
SduI GDGCHC 3 cut(s) 294, 775, 1269
SfaNI GCATC 2 cut(s) 248, 313
SinI GGWCC 1 cut(s) 874
SmiMI CAYNNNNRTG 3 cut(s) 768, 825, 1358
SnaBI TACGTA 1 cut(s) 929
SpeI ACTAGT 1 cut(s) 28
Sse9I AATT 5 cut(s) 120, 651, 900, 957, 1069
SsiI CCGC 2 cut(s) 108, 440
SspI AATATT 2 cut(s) 789, 1202
StyD4I CCNGG 3 cut(s) 891, 1281, 1391
StyI CCWWGG 1 cut(s) 869
TaaI ACNGT 7 cut(s) 262, 479, 587, 1102, 1120, 1231, 1399
TaiI ACGT 5 cut(s) 706, 931, 1257, 1346, 1414
TaqI TCGA 3 cut(s) 168, 711, 775
TasI AATT 5 cut(s) 120, 651, 900, 957, 1069
TatI WGTACW 2 cut(s) 199, 545
TfiI GAWTC 1 cut(s) 557
Tru1I TTAA 3 cut(s) 161, 1115, 1374
Tru9I TTAA 3 cut(s) 161, 1115, 1374
TscAI CASTG 5 cut(s) 181, 265, 316, 728, 1236
TseFI GTSAC 1 cut(s) 1044
TseI GCWGC 2 cut(s) 251, 517
Tsp45I GTSAC 1 cut(s) 1044
TspDTI ATGAA 6 cut(s) 647, 828, 912, 1194, 1342, 1348
TspRI CASTG 5 cut(s) 181, 265, 316, 728, 1236
Van91I CCANNNNNTGG 1 cut(s) 824
VpaK11BI GGWCC 1 cut(s) 874
XbaI TCTAGA 1 cut(s) 1189
XceI RCATGY 2 cut(s) 767, 824
XcmI CCANNNNNNNNNTGG 1 cut(s) 1424
XmaJI CCTAGG 1 cut(s) 869
XmiI GTMKAC 5 cut(s) 471, 801, 885, 1107, 1340
XmnI GAANNNNTTC 2 cut(s) 149, 790
ZrmI AGTACT 2 cut(s) 201, 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.