AT2G07180
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
2980820 .. 2983657
2838 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G07180.2

Sequence Viewer

Length: 1329 bp
ATGGGGATTTGCTTTAGCGCTGAAGATCAGCACTACCAATTTTCTCAACAACAAAACTATCCTAAGAAAACAACTCCAGGGAAAAAAGCAGCAGTGTATCTAATGAAGTCAGATTGTGAAGATGTAGTTGGTAAAGTGAGTGGAAGTGGAAGTGGTGGTGGTGGTTTGCCATTGGCTCCAAAAAACATTAAAGATCTTCAATCAAATCCAGGATATGAAAATGTTGATATTTTCACTTACGAAGAGATGAAGATTGCTACTAAGCAGTTCAGGCCGGATTATATTCTCGGTGAGGGAGGTTTCGGAGTGGTGTATAAAGGAGTTATAGATGAGTCTGTGAGGGTTGGTTTCAAGTCTACAAAAGTTGCTATCAAAGAACTTAATCCTGAGGGTTTCCAAGGAGATAGAGAGTGGCTGGCTGAAGTCAACTATTTAGGACAGCTGAGTCACCCGAATTTGGTGAAACTTATTGGCTACTGCTGTGAAGATGATCATAGATTGTTAGTCTATGAATACATGGCAATGGGGAGCCTTGAGAAACATCTTTTCCGAAGAGTTGGATGCACTTTGACATGGACAAAAAGAATGAAGATTGCGCTAGACGCAGCCAAGGGTCTTGCATTTCTTCATGGTGCTGAACGCTCCATCATATACCGGGATCTGAAGACAGCAAATATATTGCTTGATGAGGGTTACAATGCTAAACTCTCTGACTTTGGACTGGCAAAGGATGGTCCAAGAGGAGACCAAACACATGTGTCTACACGTGTTATGGGGACTTACGGATACGCTGCTCCAGAGTATGTCATGACAGGGCATTTGACATCCAGAAGTGATGTGTATGGATTCGGTGTACTTCTCCTTGAGATGCTCCTTGGGAAGAGGGCAATGGACAAAAGCAGAGCTTGCAGGGAGCATAACTTGGTAGAGTGGGCACGACCTCTTTTGAATCACAACAAAAAGCTTTTGAGGATCATAGACCCTCGAATGGATGGACAGTACGGCACTAAGGCGTTGATGAAAGTAGCTGGTTTGGCATACCAATGCCTAAGCCAAAACCCGAAAGGAAGGCCTCTCATGAATCATGTTGTAGAAGTTCTTGAGACTCTCAAGGACGACGGAGATGCTCAGGAGGAAGTCATGACTAATCTTCATAGTAGGGGAAAGTCTGTAACCTTATATGAAGCTTCTAGCGATTCTCAAGGCACAAGAGATGGGAATGGACAGAGGAGGAGAAGACCGGAAAGTGGTAGAAGCAAGAGCGAAGCCGCGGTCGACACTGAAAAATATGTTTCTACTCTTTCGGAACCGGATACTACCAAAATTTAA

Protein Analysis

442

Amino Acids

49.2

Weight (kDa)

8.45

Isoelectric Point (pI)

31.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 95 - 367 1.6e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 95 - 364 1e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012008)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 444
AccI GTMKAC 3 cut(s) 356, 761, 1275
AccII CGCG 1 cut(s) 1271
AciI CCGC 2 cut(s) 1269, 1271
AclWI GGATC 2 cut(s) 666, 980
AcsI RAATTY 2 cut(s) 454, 1323
AcuI CTGAAG 3 cut(s) 42, 441, 683
AcvI CACGTG 1 cut(s) 767
AfaI GTAC 2 cut(s) 855, 1001
AfeI AGCGCT 1 cut(s) 19
AfiI CCNNNNNNNGG 3 cut(s) 457, 988, 1247
AflIII ACRYGT 3 cut(s) 754, 764, 766
AgsI TTSAA 3 cut(s) 200, 352, 949
AjnI CCWGG 2 cut(s) 76, 208
AjuI GAANNNNNNNTTGG 2 cut(s) 111, 143
AluBI AGCT 5 cut(s) 442, 905, 964, 1028, 1187
AluI AGCT 5 cut(s) 442, 905, 964, 1028, 1187
Alw26I GTCTC 2 cut(s) 738, 1097
AlwI GGATC 2 cut(s) 666, 980
Aor51HI AGCGCT 1 cut(s) 19
AoxI GGCC 2 cut(s) 272, 1070
ApeKI GCWGC 3 cut(s) 89, 605, 791
ApoI RAATTY 2 cut(s) 454, 1323
ArsI GACNNNNNNTTYG 4 cut(s) 802, 834, 1257, 1289
AspLEI GCGC 2 cut(s) 20, 598
AspS9I GGNCC 1 cut(s) 734
AsuC2I CCSGG 1 cut(s) 656
AsuHPI GGTGA 3 cut(s) 302, 440, 472
AvaII GGWCC 1 cut(s) 734
AxyI CCTNAGG 1 cut(s) 387
BaeGI GKGCMC 1 cut(s) 937
BbrPI CACGTG 1 cut(s) 767
BbsI GAAGAC 2 cut(s) 671, 1243
BbvI GCAGC 3 cut(s) 101, 617, 778
BccI CCATC 4 cut(s) 653, 725, 986, 1208
BceAI ACGGC 1 cut(s) 1018
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciT130I CCWGG 2 cut(s) 78, 210
BciVI GTATCC 2 cut(s) 779, 1306
BclI TGATCA 1 cut(s) 490
BcnI CCSGG 1 cut(s) 656
BcoDI GTCTC 2 cut(s) 738, 1097
BfaI CTAG 2 cut(s) 599, 1191
BfoI RGCGCY 1 cut(s) 21
BfuI GTATCC 2 cut(s) 779, 1306
BglII AGATCT 1 cut(s) 193
BisI GCNGC 4 cut(s) 90, 606, 792, 1269
BlsI GCNGC 4 cut(s) 91, 607, 793, 1270
Bme1390I CCNGG 3 cut(s) 78, 210, 656
Bme18I GGWCC 1 cut(s) 734
BmgT120I GGNCC 1 cut(s) 734
BmiI GGNNCC 3 cut(s) 177, 530, 1308
BmrFI CCNGG 3 cut(s) 78, 210, 656
BmsI GCATC 3 cut(s) 551, 858, 1114
BpiI GAAGAC 2 cut(s) 671, 1243
BpmI CTGGAG 2 cut(s) 60, 780
Bpu10I CCTNAGC 2 cut(s) 1049, 1128
BpuEI CTTGAG 5 cut(s) 554, 884, 1094, 1121, 1185
BpuMI CCSGG 1 cut(s) 656
BsaAI YACGTR 1 cut(s) 767
BsaI GGTCTC 1 cut(s) 738
BsaJI CCNNGG 5 cut(s) 77, 397, 609, 874, 1269
BsaWI WCCGGW 2 cut(s) 1240, 1309
Bsc4I CCNNNNNNNGG 3 cut(s) 457, 988, 1247
Bse1I ACTGG 1 cut(s) 726
Bse21I CCTNAGG 1 cut(s) 387
Bse3DI GCAATG 2 cut(s) 528, 894
BseBI CCWGG 2 cut(s) 78, 210
BseDI CCNNGG 5 cut(s) 77, 397, 609, 874, 1269
BseGI GGATG 4 cut(s) 566, 736, 824, 997
BseLI CCNNNNNNNGG 3 cut(s) 457, 988, 1247
BseMI GCAATG 2 cut(s) 528, 894
BseMII CTCAG 3 cut(s) 378, 434, 1142
BseNI ACTGG 1 cut(s) 726
BseRI GAGGAG 3 cut(s) 756, 1243, 1246
BseSI GKGCMC 1 cut(s) 937
BseXI GCAGC 3 cut(s) 101, 617, 778
Bsh1236I CGCG 1 cut(s) 1271
Bsh1285I CGRYCG 1 cut(s) 1275
BshFI GGCC 2 cut(s) 274, 1072
BsiEI CGRYCG 1 cut(s) 1275
BsiSI CCGG 4 cut(s) 275, 655, 1241, 1310
BslFI GGGAC 1 cut(s) 790
BslI CCNNNNNNNGG 3 cut(s) 457, 988, 1247
BsmAI GTCTC 2 cut(s) 738, 1097
BsmFI GGGAC 1 cut(s) 790
BsnI GGCC 2 cut(s) 274, 1072
Bso31I GGTCTC 1 cut(s) 738
Bsp1286I GDGCHC 1 cut(s) 937
Bsp143I GATC 5 cut(s) 25, 193, 490, 658, 972
BspACI CCGC 2 cut(s) 1269, 1271
BspANI GGCC 2 cut(s) 274, 1072
BspCNI CTCAG 3 cut(s) 379, 435, 1141
BspFNI CGCG 1 cut(s) 1271
BspHI TCATGA 3 cut(s) 807, 1077, 1140
BspLI GGNNCC 3 cut(s) 177, 530, 1308
BspPI GGATC 2 cut(s) 666, 980
BspTNI GGTCTC 1 cut(s) 738
BsrDI GCAATG 2 cut(s) 528, 894
BsrI ACTGG 1 cut(s) 726
BssECI CCNNGG 5 cut(s) 77, 397, 609, 874, 1269
BssMI GATC 5 cut(s) 25, 193, 490, 658, 972
BssT1I CCWWGG 3 cut(s) 397, 609, 874
Bst2UI CCWGG 2 cut(s) 78, 210
Bst4CI ACNGT 1 cut(s) 999
Bst6I CTCTTC 3 cut(s) 237, 547, 875
BstAPI GCANNNNNTGC 1 cut(s) 906
BstBAI YACGTR 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 417, 907
BstDEI CTNAG 7 cut(s) 63, 261, 387, 443, 1008, 1049, 1128
BstDSI CCRYGG 1 cut(s) 1269
BstF5I GGATG 4 cut(s) 566, 736, 824, 997
BstFNI CGCG 1 cut(s) 1271
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 2 cut(s) 20, 598
BstKTI GATC 5 cut(s) 28, 196, 493, 661, 975
BstMAI GTCTC 2 cut(s) 738, 1097
BstMBI GATC 5 cut(s) 25, 193, 490, 658, 972
BstMCI CGRYCG 1 cut(s) 1275
BstMWI GCNNNNNNNGC 4 cut(s) 271, 602, 906, 1034
BstNI CCWGG 2 cut(s) 78, 210
BstNSI RCATGY 1 cut(s) 758
BstSCI CCNGG 3 cut(s) 76, 208, 654
BstSLI GKGCMC 1 cut(s) 937
BstUI CGCG 1 cut(s) 1271
BstV1I GCAGC 3 cut(s) 101, 617, 778
BstV2I GAAGAC 2 cut(s) 671, 1243
BstX2I RGATCY 2 cut(s) 193, 658
BstYI RGATCY 2 cut(s) 193, 658
Bsu36I CCTNAGG 1 cut(s) 387
BsuI GTATCC 2 cut(s) 779, 1306
BsuRI GGCC 2 cut(s) 274, 1072
BtgI CCRYGG 1 cut(s) 1269
BtsCI GGATG 4 cut(s) 566, 736, 824, 997
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 2 cut(s) 99, 1278
Cac8I GCNNGC 2 cut(s) 417, 907
CciI TCATGA 3 cut(s) 807, 1077, 1140
CfoI GCGC 2 cut(s) 20, 598
Cfr13I GGNCC 1 cut(s) 734
Cfr42I CCGCGG 1 cut(s) 1272
CseI GACGC 1 cut(s) 611
Csp6I GTAC 2 cut(s) 854, 1000
CviAII CATG 8 cut(s) 517, 573, 629, 755, 808, 1078, 1085, 1141
CviQI GTAC 2 cut(s) 854, 1000
DdeI CTNAG 7 cut(s) 63, 261, 387, 443, 1008, 1049, 1128
DpnI GATC 5 cut(s) 27, 195, 492, 660, 974
DpnII GATC 5 cut(s) 25, 193, 490, 658, 972
DrdI GACNNNNNNGTC 1 cut(s) 444
DseDI GACNNNNNNGTC 1 cut(s) 444
Eam1104I CTCTTC 3 cut(s) 237, 547, 875
EarI CTCTTC 3 cut(s) 237, 547, 875
Eco130I CCWWGG 3 cut(s) 397, 609, 874
Eco147I AGGCCT 1 cut(s) 1072
Eco31I GGTCTC 1 cut(s) 738
Eco47I GGWCC 1 cut(s) 734
Eco47III AGCGCT 1 cut(s) 19
Eco57I CTGAAG 3 cut(s) 42, 441, 683
Eco72I CACGTG 1 cut(s) 767
Eco81I CCTNAGG 1 cut(s) 387
EcoRII CCWGG 2 cut(s) 76, 208
EcoT14I CCWWGG 3 cut(s) 397, 609, 874
ErhI CCWWGG 3 cut(s) 397, 609, 874
FaeI CATG 8 cut(s) 520, 576, 632, 758, 811, 1081, 1088, 1144
FalI AAGNNNNNCTT 2 cut(s) 889, 921
FaqI GGGAC 1 cut(s) 790
FatI CATG 8 cut(s) 516, 572, 628, 754, 807, 1077, 1084, 1140
FbaI TGATCA 1 cut(s) 490
FblI GTMKAC 3 cut(s) 356, 761, 1275
Fnu4HI GCNGC 4 cut(s) 90, 606, 792, 1269
FokI GGATG 4 cut(s) 573, 743, 811, 1004
Fsp4HI GCNGC 4 cut(s) 90, 606, 792, 1269
FspBI CTAG 2 cut(s) 599, 1191
GlaI GCGC 2 cut(s) 19, 597
GluI GCNGC 4 cut(s) 90, 606, 792, 1269
GsuI CTGGAG 2 cut(s) 60, 780
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 2 cut(s) 274, 1072
HapII CCGG 4 cut(s) 275, 655, 1241, 1310
HgaI GACGC 1 cut(s) 611
HhaI GCGC 2 cut(s) 20, 598
Hin1II CATG 8 cut(s) 520, 576, 632, 758, 811, 1081, 1088, 1144
Hin6I GCGC 2 cut(s) 18, 596
HinP1I GCGC 2 cut(s) 18, 596
HincII GTYRAC 2 cut(s) 427, 1276
HindII GTYRAC 2 cut(s) 427, 1276
HindIII AAGCTT 2 cut(s) 962, 1185
HinfI GANTC 7 cut(s) 332, 445, 846, 949, 1081, 1105, 1196
HpaII CCGG 4 cut(s) 275, 655, 1241, 1310
HphI GGTGA 3 cut(s) 302, 440, 472
Hpy166II GTNNAC 5 cut(s) 357, 427, 762, 854, 1276
Hpy188I TCNGA 6 cut(s) 112, 305, 551, 663, 712, 1306
Hpy188III TCNNGA 8 cut(s) 386, 797, 808, 828, 1078, 1100, 1130, 1141
Hpy8I GTNNAC 5 cut(s) 357, 427, 762, 854, 1276
Hpy99I CGWCG 1 cut(s) 1121
HpyAV CCTTC 1 cut(s) 1062
HpyCH4III ACNGT 1 cut(s) 999
HpyCH4IV ACGT 1 cut(s) 766
HpyCH4V TGCA 3 cut(s) 564, 620, 909
HpyF10VI GCNNNNNNNGC 4 cut(s) 271, 602, 906, 1034
HpyF3I CTNAG 7 cut(s) 63, 261, 387, 443, 1008, 1049, 1128
HpySE526I ACGT 1 cut(s) 766
Hsp92II CATG 8 cut(s) 520, 576, 632, 758, 811, 1081, 1088, 1144
HspAI GCGC 2 cut(s) 18, 596
Ksp22I TGATCA 1 cut(s) 490
KspI CCGCGG 1 cut(s) 1272
Kzo9I GATC 5 cut(s) 25, 193, 490, 658, 972
LmnI GCTCC 6 cut(s) 181, 528, 647, 799, 876, 913
Lsp1109I GCAGC 3 cut(s) 101, 617, 778
LweI GCATC 3 cut(s) 551, 858, 1114
MaeI CTAG 2 cut(s) 599, 1191
MaeII ACGT 1 cut(s) 766
MaeIII GTNAC 3 cut(s) 446, 692, 1171
MalI GATC 5 cut(s) 27, 195, 492, 660, 974
MboI GATC 5 cut(s) 25, 193, 490, 658, 972
MflI RGATCY 2 cut(s) 193, 658
MhlI GDGCHC 1 cut(s) 937
MluCI AATT 3 cut(s) 38, 454, 1323
MlyI GAGTC 3 cut(s) 341, 454, 1099
MmeI TCCRAC 1 cut(s) 538
MseI TTAA 3 cut(s) 189, 381, 1327
MslI CAYNNNNRTG 2 cut(s) 521, 1042
MspA1I CMGCKG 2 cut(s) 442, 1271
MspI CCGG 4 cut(s) 275, 655, 1241, 1310
MspR9I CCNGG 3 cut(s) 78, 210, 656
MvaI CCWGG 2 cut(s) 78, 210
MvnI CGCG 1 cut(s) 1271
MwoI GCNNNNNNNGC 4 cut(s) 271, 602, 906, 1034
NciI CCSGG 1 cut(s) 656
NdeII GATC 5 cut(s) 25, 193, 490, 658, 972
NlaIII CATG 8 cut(s) 520, 576, 632, 758, 811, 1081, 1088, 1144
NlaIV GGNNCC 3 cut(s) 177, 530, 1308
NmuCI GTSAC 1 cut(s) 446
NspI RCATGY 1 cut(s) 758
PagI TCATGA 3 cut(s) 807, 1077, 1140
PceI AGGCCT 1 cut(s) 1072
PciI ACATGT 1 cut(s) 754
PfeI GAWTC 4 cut(s) 846, 949, 1081, 1196
PfoI TCCNGGA 1 cut(s) 208
PkrI GCNGC 4 cut(s) 91, 607, 793, 1270
PleI GAGTC 3 cut(s) 340, 453, 1099
PmaCI CACGTG 1 cut(s) 767
PmlI CACGTG 1 cut(s) 767
PpsI GAGTC 3 cut(s) 340, 453, 1099
Ppu21I YACGTR 1 cut(s) 767
PscI ACATGT 1 cut(s) 754
Psp6I CCWGG 2 cut(s) 76, 208
PspCI CACGTG 1 cut(s) 767
PspGI CCWGG 2 cut(s) 76, 208
PspN4I GGNNCC 3 cut(s) 177, 530, 1308
PspPI GGNCC 1 cut(s) 734
PsuI RGATCY 2 cut(s) 193, 658
PvuII CAGCTG 1 cut(s) 442
RsaI GTAC 2 cut(s) 855, 1001
RsaNI GTAC 2 cut(s) 854, 1000
RseI CAYNNNNRTG 2 cut(s) 521, 1042
SacII CCGCGG 1 cut(s) 1272
SalI GTCGAC 1 cut(s) 1274
SaqAI TTAA 3 cut(s) 189, 381, 1327
SatI GCNGC 4 cut(s) 90, 606, 792, 1269
Sau3AI GATC 5 cut(s) 25, 193, 490, 658, 972
Sau96I GGNCC 1 cut(s) 734
SchI GAGTC 3 cut(s) 341, 454, 1099
ScrFI CCNGG 3 cut(s) 78, 210, 656
SduI GDGCHC 1 cut(s) 937
SetI ASST 9 cut(s) 301, 444, 769, 907, 943, 966, 1030, 1178, 1189
SfaNI GCATC 3 cut(s) 551, 858, 1114
Sfr303I CCGCGG 1 cut(s) 1272
SgrBI CCGCGG 1 cut(s) 1272
SinI GGWCC 1 cut(s) 734
SmiMI CAYNNNNRTG 2 cut(s) 521, 1042
SmlI CTYRAG 5 cut(s) 533, 863, 1100, 1109, 1200
SmoI CTYRAG 5 cut(s) 533, 863, 1100, 1109, 1200
Sse9I AATT 3 cut(s) 38, 454, 1323
SseBI AGGCCT 1 cut(s) 1072
SsiI CCGC 2 cut(s) 1269, 1271
SspMI CTAG 2 cut(s) 599, 1191
StuI AGGCCT 1 cut(s) 1072
StyD4I CCNGG 3 cut(s) 76, 208, 654
StyI CCWWGG 3 cut(s) 397, 609, 874
TaaI ACNGT 1 cut(s) 999
TaiI ACGT 1 cut(s) 769
TaqI TCGA 2 cut(s) 985, 1275
TasI AATT 3 cut(s) 38, 454, 1323
TatI WGTACW 1 cut(s) 853
TauI GCSGC 1 cut(s) 1271
TfiI GAWTC 4 cut(s) 846, 949, 1081, 1196
Tru1I TTAA 3 cut(s) 189, 381, 1327
Tru9I TTAA 3 cut(s) 189, 381, 1327
TscAI CASTG 2 cut(s) 99, 1285
TseFI GTSAC 1 cut(s) 446
TseI GCWGC 3 cut(s) 89, 605, 791
Tsp45I GTSAC 1 cut(s) 446
TspGWI ACGGA 2 cut(s) 798, 1134
TspRI CASTG 2 cut(s) 99, 1285
VpaK11BI GGWCC 1 cut(s) 734
XapI RAATTY 2 cut(s) 454, 1323
XceI RCATGY 1 cut(s) 758
XmiI GTMKAC 3 cut(s) 356, 761, 1275
XspI CTAG 2 cut(s) 599, 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.